An Autonomously Reciprocating Transmembrane Nanoactuator

Biological molecular machines operate far from equilibrium by coupling chemical potential to repeated cycles of dissipative nanomechanical motion. This principle has been exploited in supramolecular systems that exhibit true machine behavior in solution and on surfaces. However, designed membrane‐spanning assemblies developed to date have been limited to simple switches or stochastic shuttles, and true machine behavior has remained elusive. Herein, we present a transmembrane nanoactuator that turns over chemical fuel to drive autonomous reciprocating (back‐and‐forth) nanomechanical motion. Ratcheted reciprocating motion of a DNA/PEG copolymer threaded through a single α‐hemolysin pore was induced by a combination of DNA strand displacement processes and enzyme‐catalyzed reactions. Ion‐current recordings revealed saw‐tooth patterns, indicating that the assemblies operated in autonomous, asymmetric cycles of conformational change at rates of up to one cycle per minute.     

Recent Advances in Fuel‐Driven Molecular Switches and Machines

The molecular switches and machines arena has entered a new phase in which molecular machines operate under out‐of‐equilibrium conditions using appropriate fuel. Unlike the equilibrium version, the dissipative off‐equilibrium machines necessitate only one stimulus input to complete each cycle and decrease chemical waste. Such a modus operandi would set significant steps towards mimicking the natural machines and may offer a platform for advancing new applications by providing temporal control. This review summarises the recent progress and blueprint of autonomous fuel‐driven off‐equilibrium molecular switches and machines.     

Precise Polymer Synthesis by Autonomous Self‐Optimizing Flow Reactors

A novel continuous flow system for automated high‐throughput screening, autonomous optimization, and enhanced process control of polymerizations was developed. The computer‐controlled platform comprises a flow reactor coupled to size exclusion chromatography (SEC). Molecular weight distributions are measured online and used by a machine‐learning algorithm to self‐optimize reactions towards a programmed molecular weight by dynamically varying reaction parameters (i.e. residence time, monomer concentration, and control agent/initiator concentration). The autonomous platform allows targeting of molecular weights in a reproducible manner with unprecedented accuracy (<2.5 % deviation from pre‐selected goal) for both thermal and light‐induced reactions. For the first time, polymers with predefined molecular weights can be custom made under optimal reaction conditions in an automated, high‐throughput flow synthesis approach with outstanding reproducibility.     

Synthesis of maleic anhydride grafted polyethylene and polypropylene,with controlled molecular structures

This article discusses a new chemical route to prepare maleic anhydride (MA) grafted polyethylene and polypropylene polymers with controlled molecular structure, that is, MA grafted content and polymer molecular weight and composition distributions. The chemistry involves a free radical graft reaction of maleic anhydride with poly(ethylene‐co‐p‐methylstyrene) and poly(propylene‐co‐p‐methylstyrene) copolymers. Under a suspension reaction condition, the grafting reaction takes place selectively on the p‐methylstyrene units in the copolymer, due to high reactivity of p‐methyl group and favorable mixing between p‐methylstyrene units and chemical reagents in the swollen amorphous phases. The resulting polymer shows no detectable molecular weight change during the reaction, and the MA grafted content increases with the increase of initiator and p‐methylstyrene concentrations. © 2000 John Wiley & Sons, Inc. J Polym Sci A: Polym Chem 38: 1337–1343, 2000     

Kinetic Asymmetry and Directionality of Nonequilibrium Molecular Systems

Scientists have long been fascinated by the biomolecular machines in living systems that process energy and information to sustain life. The first synthetic molecular rotor capable of performing repeated 360° rotations due to a combination of photo- and thermally activated processes was reported in 1999. The progress in designing different molecular machines in the intervening years has been remarkable, with several outstanding examples appearing in the last few years. Despite the synthetic accomplishments, there remains confusion regarding the fundamental design principles by which the motions of molecules can be controlled, with significant intellectual tension between mechanical and chemical ways of thinking about and describing molecular machines. A thermodynamically consistent analysis of the kinetics of several molecular rotors and pumps shows that while light driven rotors operate by a power-stroke mechanism, kinetic asymmetry—the relative heights of energy barriers—is the sole determinant of the directionality of catalysis driven machines. Power-strokes—the relative depths of energy wells—play no role whatsoever in determining the sign of the directionality. These results, elaborated using trajectory thermodynamics and the nonequilibrium pump equality, show that kinetic asymmetry governs the response of many non-equilibrium chemical phenomena.     

Azobenzene: A Photoactive Building Block for Supramolecular Architectures

The development of nanoscale systems capable to perform specific functions under external control is a challenging task and a fascinating objective in Chemistry. Photochromic compounds undergo radical changes in their physico‐chemical properties upon light excitation, for this reason they are valuable building blocks for the construction of photo‐controllable molecular devices, machines and materials. The E–Z photoisomerization of azobenzene has been known for almost 80 years and – owing to its high efficiency and excellent reversibility – has been widely employed to introduce an element of photo‐control in a large variety of compounds, biomolecules, nanosystems and materials. Here we present some of our research results highlighting how this outstanding photochrome can be utilized to develop systems with light‐induced functionalities.     

Artificial molecular-level machines

The concept of "machine" can be extended to the molecular level by designing supramolecular species capable of performing mechanical-like movements as a consequence of an appropriate energy supply. Molecular-level machines operate via electronic and nuclear rearrangements, for example, through some kind of chemical reaction. Like macroscopic machines, they are characterized by: (i) the kind of energy input supplied to make them work, (ii) the kind of movement performed by their components, (iii) the way in which their operation can be controlled and monitored, (iv) the possibility to repeat the operation at will and establish a cyclic process, (v) the time scale needed to complete a cycle of operation, and (vi) the function performed. A crucial issue is that concerning energy supply. Artificial machines powered by chemical energy ("fuels") produce waste products whose accumulation compromises the operation of the machine unless they are removed from the system. Photochemical and electrochemical energy inputs, however, can be used to make a machine work without formation of waste products. Examples of chemically, electrochemically, and photochemically powered machines investigated in our laboratory are reviewed, and future directions for the construction of novel machines are illustrated. The two most interesting kinds of applications of molecular-level machines are related to the mechanical aspect, which can be exploited, for example, for molecular-level transportation purposes, and the logic aspect, which can be exploited for information processing at the molecular level and, in the long run, for the construction of molecular level (chemical) computers.     

Structural Changes of a Doubly Spin‐Labeled Chemically Driven Molecular Shuttle Probed by PELDOR Spectroscopy

Gaining detailed information on the structural rearrangements associated with stimuli‐induced molecular movements is of utmost importance for understanding the operation of molecular machines. Pulsed electron–electron double resonance (PELDOR) was employed to monitor the geometrical changes arising upon chemical switching of a [2]rotaxane that behaves as an acid–base‐controlled molecular shuttle. To this aim, the rotaxane was endowed with stable nitroxide radical units in both the ring and axle components. The combination of PELDOR data and molecular dynamic calculations indicates that in the investigated rotaxane, the ring displacement along the axle, caused by the addition of a base, does not alter significantly the distance between the nitroxide labels, but it is accompanied by a profound change in the geometry adopted by the macrocycle.     

Photo‐/Baso‐Chromisms and the Application of a Dual‐Addressable Molecular Switch

Two typical molecular switches of spiropyran (SP) and benzoxazine (OX) were fused by sharing an indole to achieve a new dual‐addressable molecular switch (SP‐OX‐NO₂). Through proper molecular modification with NO₂, the transformation from merocyanine (MC) to ring‐closed SP or ring‐closed OX can be controlled separately with visible light or base stimuli in solution, respectively, and these processes are verified by UV‐vis and NMR spectroscopy as well as control experiments. The cis‐merocyanine (cis‐MC) form is involved in the basochromic process in solution. DFT calculation suggests that the bidirectional switching property of the fused SP‐OX molecular switch can be controlled separately, when the OX isomer is more stable than the deprotonated SP isomer. Because of the significant color variations in solution, the simple dual‐addressable switch has been further successfully applied to construct a multicolor reversible display on paper.     

Intramolecular Cyclization of Carbonate and Thiocarbonate Derivatives of myo‐Inositol in the Solid State: Implications for Acyl Group Transfer Reactions in Molecular Crystals

Racemic 4‐O‐phenoxycarbonyl and 4‐O‐phenoxythiocarbonyl derivatives of myo‐inositol orthoformate undergo thermal intramolecular cyclization in the solid state to yield the corresponding 4,6‐bridged carbonates and thiocarbonates, respectively. The thermal cyclization also occurs in the solution and molten states, but less efficiently, suggesting that these cyclization reactions are aided by molecular pre‐organization, although not strictly topochemically controlled. Crystal structures of two carbonates and a thiocarbonate clearly revealed that the relative orientation of the electrophile and the nucleophile in the crystal lattice facilitates the intramolecular cyclization reaction and forbids the intermolecular reaction. The correlation observed between the chemical reactivity and the non‐covalent interactions in the crystal of the reactants provides a way to estimate the chemical stability of analogous molecules in the solid state.     

Chemistry of Energetically Activated Cumulenes—From Allene (H2CCCH2) to Hexapentaene (H2CCCCCCH2)

During the last decade, experimental and theoretical studies on the unimolecular decomposition of cumulenes (H₂C_nH₂) from propadiene (H₂CCCH₂) to hexapentaene (H₂CCCCCCH₂) have received considerable attention due to the importance of these carbon‐bearing molecules in combustion flames, chemical vapor deposition processes, atmospheric chemistry, and the chemistry of the interstellar medium. Cumulenes and their substituted counterparts also have significant technical potential as elements for molecular machines (nanomechanics), molecular wires (nano‐electronics), nonlinear optics, and molecular sensors. In this review, we present a systematic overview of the stability, formation, and unimolecular decomposition of chemically, photo‐chemically, and thermally activated small to medium‐sized cumulenes in extreme environments. By concentrating on reactions under gas phase thermal conditions (pyrolysis) and on molecular beam experiments conducted under single‐collision conditions (crossed beam and photodissociation studies), a comprehensive picture on the unimolecular decomposition dynamics of cumulenes transpires.     

RuII Multinuclear Metallosupramolecular Rack‐Type Architectures of Polytopic Hydrazone‐Based Ligands: Synthesis,Structural Features,Absorption Spectra,Redox Behavior,and Near‐Infrared Luminescence

A novel class of polytopic hydrazone‐based ligands was synthesized. They gave heteroleptic Ru^II polynuclear rack‐like complexes of formula [Ru_nterpy_n(bridging molecular strand)]²ⁿ⁺ (terpy=2,2′:6′,2′′‐terpyridine). The new rack‐like systems can be viewed as being made of two identical or roughly identical peripheral subunits separated by several similar metal‐containing spacer subunits. The presence of pyrazine or pyrimidine units within the molecular multitopic strands introduces additional chemical diversity: whereas a pyrimidine unit leads to appended orthogonal subunits that are on the same side with regard to the main molecular strand, a pyrazine unit leads to orthogonal subunits that lie on different sides. Mixing pyrazine and pyrimidine units within the same (bridging) molecular strand also allows peculiar and topographically controlled geometries to be obtained. Redox studies provided evidence that each species undergoes reversible redox processes at mild potentials, which can be assigned to specific subunits of the multicomponent arrays. Non‐negligible electronic coupling takes place among the various subunits, and some electron delocalization extending over the overall bridging molecular strand takes place. In particular, oxidation data suggest that the systems can behave as p‐type “molecular wires” and reduction data indicate that n‐type electron conduction can occur within the multimetallic framework. All the multinuclear racks exhibit ³MLCT emission, both at 77 K in rigid matrix and at 298 K in fluid solution, which takes place in the near‐infrared region (emission maxima in the 1000–1100 nm region), and is quite structured. Rigidity of the molecular structures and delocalization within the large bridging ligands are proposed to contribute to the occurrence of the rather uncommon MLCT infrared emission, which is potentially interesting for optical communication devices.     

Abiotic Chemical Fuels for the Operation of Molecular Machines

Natural molecular machines require a continuous fuel supply to perform motions and/or remain in a functional state. Consequently, the aim of developing artificial devices and materials with life‐type properties has motivated a growing interest in abiotic chemical fuels and in their supply modalities. Many artificial molecular machines have been developed in which the sequential addition of several chemical reagents allows the machine to perform complete cycles of motion. Only recently, examples of molecular machines whose cycles of motion are triggered by a single pulse of fuel have been reported. The latter systems are the object of this Minireview where the abiotic chemical fuels used so far to trigger the complete cycles of motion of molecular machines are described, with particular emphasis on the operation mechanism of the machine/fuel systems.     

Molecular Logic Gates and Switches Based on 1,3,4‐Oxadiazoles Triggered by Metal Ions

Organic molecular devices for information processing applications are highly useful building blocks for constructing molecular‐level machines. The development of “intelligent” molecules capable of performing logic operations would enable molecular‐level devices and machines to be created. We designed a series of 2,5‐diaryl‐1,3,4‐oxadiazoles bearing a 2‐(para‐substituted)phenyl and a 5‐(o‐pyridyl) group (substituent X=NMe₂, OEt, Me, H, and Cl; 1 a – e ) that form a bidentate chelating environment for metal ions. These compounds showed fluorescence response profiles varying in both emission intensity and wavelength toward the tested metal ions Ni²⁺, Cu²⁺, Zn²⁺, Cd²⁺, Hg²⁺, and Pb²⁺ and the responses were dependent on the substituent X, with those of 1 d being the most substantial. The 1,3,4‐oxadiazole O or N atom and pyridine N atom were identified as metal‐chelating sites. The fluorescence responses of 1 d upon metal chelation were employed for developing truth tables for OR, NOR, INHIBIT, and EnNOR logic gates as well as “ON‐OFF‐ON” and “OFF‐ON‐OFF” fluorescent switches in a single 1,3,4‐oxadiazole molecular system.     

Dissipative Catalysis with a Molecular Machine

We report on catalysis by a fuel‐induced transient state of a synthetic molecular machine. A [2]rotaxane molecular shuttle containing secondary ammonium/amine and thiourea stations is converted between catalytically inactive and active states by pulses of a chemical fuel (trichloroacetic acid), which is itself decomposed by the machine and/or the presence of additional base. The ON‐state of the rotaxane catalyzes the reduction of a nitrostyrene by transfer hydrogenation. By varying the amount of fuel added, the lifetime of the rotaxane ON‐state can be regulated and temporal control of catalysis achieved. The system can be pulsed with chemical fuel several times in succession, with each pulse activating catalysis for a time period determined by the amount of fuel added. Dissipative catalysis by synthetic molecular machines has implications for the future design of networks that feature communication and signaling between the components.     

Synthesis of novel hydrocarbon polymers containing 6‐membered rings in the main chain: living anionic polymerization of 1,3‐cyclohexadiene

The n‐butyllithium (n‐BuLi)/N,N,N',N'‐tetrametylethylene‐diamine (TMEDA) system (the molar ratio of TMEDA to n‐BuLi higher than 4/4) has been found to polymerize 1,3‐cyclohexadiene (1,3‐CHD) to produce “living” polymer having narrow molecular weight distribution with well‐controlled polymer chain length. Binary and ternary block copolymers with narrow molecular weight distribution could be synthesized from 1,3‐cyclohexadiene, styrene, and butadiene with very high efficiency. These polymers and their hydrogenated derivatives have excellent thermal, mechanical, chemical, and optical properties for the new industrial materials.     

Interfacial nanoarchitectonics for molecular manipulation and molecular machine operation

The nanoarchitectonics concept enables us to produce functional systems and materials from nanoscale units through nanotechnological approaches together with the processes including chemical syntheses, atom/molecule manipulations, self-assemblies, self-organizations, field-induced material regulations, and bio-related processes. Especially, manipulations of molecules (molecular machines) and sophisticated organization would be attractive targets in interfacial nanoarchitectonics. In this short review, we introduce several typical examples on manipulations of functional molecules and molecular machines at interfacial media. The examples are classified roughly according to driving forces of manipulations; (i) manipulations through chemical reactions and interactions; (ii) light-driven manipulations; (iii) electrically controlled manipulations; (iv) mechanical manipulations. Future possibilities of molecular manipulations at interfaces such as usages in biological systems are discussed in perspective section.     

Translation of Dicarboxylate Structural Information to Fluorometric Optical Signals through Self‐Assembly of Guanidinium‐Tethered Oligophenylenevinylene

Although self‐assembly has realized the spontaneous formation of nanoarchitectures, the nanoscopic expression of chemical structural information at the molecular level can alternatively be regarded as a tool to translate molecular structural information with high precision. We have found that a newly developed guanidinium‐tethered oligophenylenevinylene exhibits characteristic fluorescence (FL) responses toward L ‐ and meso‐tartarate, wherein the different self‐assembly modes, termed J‐ or H‐type aggregation, are directed according to the molecular information encoded as the chemical structure. This morphological difference originates from the geometric anti versus gauche conformational difference between L ‐ and meso‐tartarate. A similar morphological difference can be reproduced with the geometric C?C bond difference between fumarate and maleate. In the present system, the dicarboxylate structural information is embodied in the inherent threshold concentration of the FL response, the signal‐to‐noise ratio, and the maximum FL wavelength. These results indicate that self‐assembly is meticulous enough to sense subtle differences in molecular information and thus demonstrate the potential ability of self‐assembly for the expression of a FL sensory system.     

Photoisomerization of a Chiral Imine Molecular Switch Followed by Matrix‐Isolation VCD Spectroscopy

Characterizing the stereochemistry of transient photoisomerization products remains a big challenge for the design of molecular machines, such as unidirectional molecular motors. Often these states are not stable long enough to be characterized in detail using conventional spectroscopic tools. The structurally simple camphorquinone imine 1 serves to illustrate the advantage of combining the matrix‐isolation technique with vibrational circular dichroism (VCD) spectroscopy for the investigation of photoisomerizations of chiral molecules. In particular, it is shown that both (E )‐ and (Z )‐ 1 can be generated photochemically at cryogenic temperatures in an argon matrix, and more importantly, that the stereochemistry of both switching states can be characterized reliably.     

Autonomous conveyer gel driven by frontal polymerization

Autonomous mechanical mass transportation for cargos on the microscale with no need of continuous external powering is of great scientific and technological interest due to their extensive applications. However, it is still challenging to create a self‐driven system applicable to diverse micromaterial transportation demands. In this work, we developed a novel autonomous conveyer gel driven by frontal polymerization (FP). The chemical wave produced in FP was stable, and self‐propagating with a constant velocity, which can be easily monitored by thermal imaging or fluorescence labeling. We investigated the influence of the initiation temperature, swelling ratio of the gel substrate, and the size of the cargos on the motion of driven behavior. Results showed that the driving velocity can be well controlled by altering the initiation temperatures of FP. The swelling ratio and the size of the cargos had a key impact on the feasibility of self‐driven behavior. In addition, powerful driven capability by FP was demonstrated by successfully transporting cargos in series, and further applied for targeted synthesis of CdS nanocrystals. The methodology developed here provides an effective way to convert chemical energy to mechanical work, and may be useful in energy conversion and utilization, mass transportation and other applications. © 2015 Wiley Periodicals, Inc. J. Polym. Sci., Part A: Polym. Chem. 2016 , 54, 1323‐1331