Anion-anion assembly: a new class of anionic supramolecular polymer containing 3,4-dichloro-2,5-diamido-substituted pyrrole anion dimers

Two molecules containing two 2,5-diamido,3,4-dichloropyrrole units linked via 1,3- or 1,4-substituted benzene rings have been synthesized. The pyrrole groups in these compounds deprotonate in the presence of tetrabutylammonium fluoride and form pyrrole anion dimers via NH...N- hydrogen bonds. This dimerization process results in the formation of polyanionic chains linked via an unusual "orthogonal" hydrogen-bonding array.     

The smallest alpha,gamma-peptide nanotubulet segments: cyclic alpha,gamma-tetrapeptide dimers

[structure: see text] Cyclic tetrapeptides in which alpha-amino acids alternate with cis-3-aminocycloalkanecarboxylic acids dimerize by forming hydrogen bonds between their alpha-faces but not between their gamma-faces, establishing the minimal structural requirements for the novel alpha,gamma-peptide hybrids SPN.     

Spatial distribution of sodium dimers generated by a laser microprobe

Spatial mapping of sodium dimers and sodium atoms produced in a laser-generated plume is reported. The distributions support a sputtering mechanism for atom production.     

Understanding nanoparticle assembly: a simulation approach to SERS-active dimers

We report herein on a model built to analyze and optimize nanoparticle (NP) dimer formation. The rationale for this work stems from our interest in building effective NP dimer-based tagging systems for surface enhanced Raman scattering (SERS)-based detection. This model takes into account the behavior of the NPs in solution and the molecules on their surface, to provide a coherent and physically constrained system. The kinetics of formation of dimers and larger assemblies are investigated on suspensions of varying concentrations through a coarse-grained ad hoc computer simulation based on a Molecular Dynamics-like approach. Several different effects are considered, including the behavior and interaction of surface molecules, the interactions between the latter and the NPs, and between NPs. The surface molecules are treated as rigid structures that can occupy specific binding sites. A Brownian model is used to both integrate the particle trajectory and provide random thermal forces. These systems show a NP concentration-dependent behavior with respect to the formation of dimers versus larger assemblies over the timescale of the simulation. The simulations also indicate that these systems form low-density aggregates as opposed to the close packed formations reported previously. A dependence on the properties and the concentration of the linkers is also demonstrated.     

The intramolecular,stereoselective addition of sulfoximine carbanions to alpha,beta-unsaturated esters

ortho-Bromocinnamates can be coupled with methyl phenylsulfoximine to afford N-arylsulfoximines in excellent yield. Treatment of these products with an amide base results in a completely stereoselective cyclization to afford enantiomerically pure benzothiazines. This reaction is stereospecific.     

Domains of colloidal size, mediated by self-assembly of small molecules in a polymer matrix: a three-level hierarchy of assembly

Studies on self-assembly of molecules, mediated by, e.g., hydrogen bonding interactions, are a major theme currently. The consequence of such self-assembly of hydrogen-bonding molecules, when dispersed in a polymer matrix, has not been studied so far. We describe such a polymer dispersed self-assembling small molecule system, in which a homologous series of small molecules, with a hydrogen-bonding moiety and alkyl side chains, is dispersed in polycarbonate. These are not liquid crystalline. The self-assembling molecules form colloidal size domains in the polymer, and this involves a hierarchy of three levels of assembly. The molecules self-assemble into small crystallites, which then organize into spherulitic structures. These spherulites then aggregate to form large, uniform near-spherical domains. The size and uniformity of the domains depend on the length of the alkyl side chain. The domain formation is reversible; that is, these domains can be melted and reformed.     

The internal-state distribution of sodium dimers in a free jet expansion

The internal-state distribution of sodium dimers (Na₂) is studied experimentally in the first part of a low-pressure free jet expansion of sodium vapour, using the method of laser-induced fluorescence. The measured distribution is of a Boltzmann type at the nozzle exit but deviates strongly from it thereafter.     

Supramolecular assembly in a polymer/ low-molar-mass system

Thermal analysis and infra-red spectroscopy have been used to study the interactions between poly (N-vinylpyrrolidone) and low-molar-mass, hydrogen-bonding-active aromatics. A remarkably strong interaction is observed between the polymer and 3,5-dihydroxybenzoic acid, which is consistent with the crosslinking of the polymer by acid dimers.     

Aggregation of sodium dodecyl sulfate in aqueous sodium chloride solutions

Summary Aqueous solutions of sodium dodecyl sulfate with added sodium chloride (0–0.3 mol kg^–1) were studied at 298.2 K in order to calculate the molar standard free energy of micelle formationG _m . The following properties were measured: (i) aggregation number by membrane osmometry, (ii) counter-ion binding and sodium ion activities by electromotive force, (iii) critical micelle concentration by electromotive force and fluorescence spectrophotometry. The results indicate thatG _m . is independent of the NaCl concentration.     

pH-controlled, polymer-mediated assembly of polymer micelle nanoparticles

We describe pH-controlled, polymer-mediated assembly of polymer micelles in aqueous media based on reversible complexation between the micelles of pyrene-labeled poly(epsilon-caprolactone)-b-poly(carboxylic acid) copolymers and proton-accepting water-soluble polymers such as poly(ethylene glycol) (PEG), poly(2-ethyl-2-oxazoline) (PEtOz), and poly(1-vinylpyrrolidone) (PVP). The key factor determining assembly phenomena was identified as the modulation of hydrogen-bonding interaction between ionizable anionic micellar shells and the proton-accepting polymers by the pH control. As pH decreased from 7.4 to 2.0, the mixture of the polymer micelles and polymers underwent assembly and formed solid hybrids at specific pH values. The micelles assembled in the hybrid could be reversibly dispersed as micelles above specific pH ranges. The assembly/disassembly behavior as well as phase transitions of the micelle/proton-accepting polymer could be precisely controlled by adjusting pH. This assembling behavior depended on the rationally designed parameters such as the chemical structure and length of micellar shell-forming poly(carboxylic acid)s and the class of proton-accepting polymers.     

Reversible assembly and disassembly of gold nanoparticles directed by a zwitterionic polymer

Herein, we have successfully introduced the stimuli-response concept into the controllable synthesis of gold nanoparticles (AuNPs) with designed properties. We used a pH-responsive zwitterionic polymer that acted as a template and a stabilizer. Gold colloids prepared in situ from the polymer solution have a narrow size distribution of about 5 nm. The assembly and disassembly of AuNPs can be finely tuned by modulating the net charges of the zwitterionic polymer so that they are either positive or negative as a function of the solution pH. Different aggregates and colors appear on altering the solution pH. In acidic solutions, gold colloids form large symmetrical aggregates, while the AuNPs disperse in solutions with a pH approximately 9.6. However, as the solution pH increases (>9.6), needle-like aggregates with a small interparticle distances are formed. On the basis of TEM, SEM, 1H NMR and UV/Vis measurements, we attribute pH-triggered aggregation and color changes of the gold colloids to the ionization process and conformational change of the polymer. The ionization process governs the choice of ligand anchored on the surface of AuNPs, and the conformational change of the polymer modulates the interspaces between AuNPs. The present approach, which is based on a rational design of the physicochemical properties of the template used in the synthesis process, provides a powerful means to control the properties of the nanomaterial. Furthermore, the colorimetric readout can be visualized and applied to future studies on nanoscale switches and sensors.     

Bilateral, difunctional nanosphere aggregates and their assembly mediated by polymer chains

We have developed an efficient method for producing difunctional, bilateral nanospheres. A monolayer of nanoparticles was prepared followed by deposition of a thin layer of metal. By varying the base particle and metal deposited, bilateral nanoparticles were formed. The different regions of the nanoparticles were selectively functionalized with polymer linkers containing specific terminal groups, thereby creating bilateral, difunctional nanoparticles. Subsequent covalent cross-linking of different nanoparticles enabled the formation of stable architectures with programmed hierarchy and controlled chemical composition.     

Controlled nanoparticle assembly by dewetting of charged polymer solutions

In this paper, we present an alternative approach for controlled nanoparticle organization on a solid substrate by applying dewetting patterns of charged polymer solutions as a templating system. Thin films of charged polymer solutions dewet a solid substrate to form complex dewetting patterns that depend on the polymer charge density. These patterns, ranging from polygonal networks to elongated structures that are stabilized by viscous forces during dewetting, serve as potential templates for two-dimensional nanoparticle organization on a solid substrate. Thus, while nanoparticles dried in pure water undergo self-assembly to form close-packed arrays, addition of charged polymer in the dispersion leads to the formation of open structures that are directed by the dewetting patterns of the polymer solution. In this study, we focus on the application of elongated structures resulting from dewetting of high-charge-density polymer solutions to align nanoparticles of silica and gold into long chains that are several micrometers in length. The particle ordering process is a two-step mechanism: an initial confinement of the nanoparticles in the dewetting structures and self-assembly of the particles within these structures upon further drying by lateral capillary attractions.     

Synthesis of non-peptidyl alpha,alpha-difluoromethylenephosphonic acids on a soluble polymer support

The polymer-supported syntheses of a series of biaryl derivatives bearing the alpha,alpha-difluoromethylenephosphonic acid group is reported. Non-cross-linked polystyrene (NCPS) was used as the support which enabled the reactions to be carried out under homogeneous conditions and reactions to be followed using conventional (19)F NMR. Synthesis of the biaryl phosphonic acids was initiated by attaching mono-ethyl esters of alpha, alpha-difluorophosphonic acids 11 and 12 to 3% alkylhydroxy-modified NCPS via a phosphate ester linkage. Suzuki reaction conditions were developed which allowed for the formation of a series of polymer-bound biaryl phosphonates at ambient temperature. Removal of phosphonic acids from the support and cleavage of the ethyl protecting group was achieved in a single step using TMSI or TMSBr. Yields of the phosphonic acids ranged from 43 to 89% and, in most cases, were obtained in a purity (96-99%), after cleavage from the support, that was sufficient for biological screening.     

Electronic transitions of guanine tautomers, their stacked dimers, trimers and sodium complexes

Planar and nonplanar geometries of the keto-N9H and keto-N7H tautomers of the guanine base of DNA as well as the hydrogen bonded complexes of these species with three water molecules each were optimized using the density functional theory at the B3LYP/6-31G** level. Geometries of the isolated bases were also optimized using the ab initio approach at the MP2/6-31G** level. The isolated keto-N9H and keto-N7H tautomers as well as their hydrogen bonded complexes with three water molecules each were solvated in bulk water employing the polarized continuum model (PCM) of the self-consistent reaction field theory (SCRF). Stacked dimers and trimers of both the tautomers of guanine were generated by placing the planar forms of the species at a fixed distance of 3.5 A from the neighboring one and rotating one molecule with respect to the other by 110 degrees for the keto-N9H form and 90 degrees for the keto-N7H form which corresponded to total energy minima at the B3LYP/6-31G** level. Geometry optimization for the cation of the monomer of guanine was performed at the same level of theory, and its solvation in bulk water was treated using the PCM model of the SCRF theory. The geometries of complexes of the two tautomers of guanine with a Na+ ion each were optimized at the B3LYP/6-31G** level, and the Na+ ion is predicted to bind with the keto-N9H tautomer preferentially. While the complex of the keto-N7H form of guanine with three water molecules in gas phase is slightly more stable than the corresponding complex of the keto-N9H form of guanine, the reverse is true in bulk water. Stacking interactions enhance the relative stability of the keto-N9H tautomer over that of the keto-N7H tautomer, suggesting that in bulk solutions, the former would be dominant. Electronic spectra of the isolated tautomers of guanine, those of their complexes with three water molecules each, the (keto-n9h and keto-n7h) cation of guanine, the complexes of the tautomers with a Na+ ion each, the stacked dimers and trimers of the two tautomers were calculated using configuration interaction involving single electron excitations (CIS). The relative absorption intensities of the two tautomers of guanine near 275 and 248 nm in the monomer, dimer, and trimer are predicated to be in the opposite order. Thus the absorption intensity oscillation observed using a guanine aqueous solution can be explained in terms of oscillation of relative populations of the two tautomers of the molecule. The 248 nm absorption peak would be appreciably red-shifted on formation of the cation of guanine. Binding of the Na+ ion with the two tautomers of guanine reduces intensities of their transitions appreciably and also it causes large red-shifts in the same.