Dynamics of water in a molecular sieve by quasielastic neutron scattering

We have investigated the dynamics of water confined in a molecular sieve, with a cylindrical pore diameter of 10 A, by means of quasielastic neutron scattering (QENS). Both the incoherent and coherent intermediate scattering functions I(Q,t) were determined by time-of-flight QENS and the neutron spin-echo technique, respectively. The results show that I(Q,t) is considerably more stretched in time with a slightly larger average relaxation time in the case of coherent scattering. From the Q dependence of I(Q,t) it is clear that the observed dynamics is almost of an ordinary translational nature. A comparison with previous dielectric measurements suggests a possible merging of the alpha and beta relaxations of the confined water at T=185 K, although the alpha relaxation cannot be directly observed at lower temperatures due to the severe confinement. The present results are discussed in relation to previous results for water confined in a Na-vermiculite clay, where the average relaxation time from spin-echo measurements was found to be slower than in the present system (particularly at low temperatures).     

Dielectric relaxation processes in water mixtures of tripropylene glycol

Broadband dielectric measurements for anhydrous tripropylene glycol (3PG) and 96, 92, 84, 80, 74, 71, and 68 wt % 3PG-water mixtures are performed in the frequency range of 10(-2)-10(7) Hz and in the temperature range of 123-243 K. We examined the effect of adding water into anhydrous 3PG on relaxation dynamics. Apart from the two well-known relaxation processes, i.e., alpha and beta for anhydrous 3PG we observed new relaxation peak (beta') for all aqueous mixtures of 3PG. In addition we found the critical mole fraction of water x(w)=0.67 in which relaxation dynamics changes its behavior. According to the Sudo approach [S. Sudo et al., J. Non-Cryst. Solids 307-310, 356 (2002)], the behavior of relaxation processes was interpreted assuming the existence of three kinds of cooperative domains (CDs): containing only 3PG molecules, including only water molecules, and including both 3PG and water molecules, which molecules of each kind CD are bound by hydrogen bonds.     

An investigation of water dynamics in binary mixtures of water and dimethyl sulfoxide

The motion of water molecules in mixtures of water and d6-dimethyl sulfoxide (DMSO) has been explored through molecular dynamics (MD) simulations using the SPC/E water model (J. Chem. Phys. 1987, 91, 6269) and the P2 DMSO model (J. Chem. Phys. 1993, 98, 8160). We evaluate the self-intermediate scattering functions, FS(Q,t), which are related by a Fourier transform to the incoherent structure factors, S(Q,omega), measured in quasielastic neutron scattering (QNS) experiments. We compare our results to recent QNS experiments on these mixtures reported by Bordallo et al. (J. Chem. Phys. 2004, 121, 12457). In addition to comparing the MD data to the experimental signals, which correspond to a convolution of S(Q,omega) with a resolution function, we examine the rotational and translational components of FS(Q,t) and investigate to what extent simulation results for the single-molecule dynamics follow the dynamical models that are used in the analysis of the experimental data. We find that the agreement between the experimental signal and the MD data is quite good and that the portion of FS(Q,t) due to translational dynamics is well represented by the jump-diffusion model. The model parameters and their composition dependence are in reasonable agreement with experiment, exhibiting similar trends in water mobility with composition. Specifically, we find that water motion is less hindered in water-rich and water-poor mixtures than it is near equimolar composition. We find that the extent of coupling between rotational and translational motion contributing to FS(Q,t) increases as the equimolar composition of the mixture is approached. Thus, the decoupling approximation, which is used to extract information on rotational relaxation from QNS spectra at higher momentum transfer (Q) values, becomes less accurate than that in water-rich or DMSO-rich mixtures. We also find that rotational relaxation deviates quite strongly from the isotropic rotational diffusion model. We explore this issue further by investigating the behavior of orientational time correlations for different unit vectors and corresponding to Legendre polynomials of orders 1-4. We find that the rotational time correlations of water molecules behave in a way that is more consistent with the extended jump rotation model recently proposed by Laage and Hynes (Science 2006, 311, 832).     

Molecular view of water dynamics near model peptides

Incoherent quasi-elastic neutron scattering (QENS) has been used to measure the dynamics of water molecules in solutions of a model protein backbone, N-acetyl-glycine-methylamide (NAGMA), as a function of concentration, for comparison with results for water dynamics in aqueous solutions of the N-acetyl-leucine-methylamide (NALMA) hydrophobic peptide at comparable concentrations. From the analysis of the elastic incoherent structure factor, we find significant fractions of elastic intensity at high and low concentrations for both solutes, which corresponds to a greater population of protons with rotational time scales outside the experimental resolution (>13 ps). The higher-concentration solutions show a component of the elastic fraction that we propose is due to water motions that are strongly coupled to the solute motions, while for low-concentration solutions an additional component is activated due to dynamic coupling between inner and outer hydration layers. An important difference between the solute types at the highest concentration studied is found from stretched exponential fits to their experimental intermediate scattering functions, showing more pronounced anomalous diffusion signatures for NALMA, including a smaller stretched exponent beta and a longer structural relaxation time tau than those found for NAGMA. The more normal water diffusion exhibited near the hydrophilic NAGMA provides experimental support for an explanation of the origin of the anomalous diffusion behavior of NALMA as arising from frustrated interactions between water molecules when a chemical interface is formed upon addition of a hydrophobic side chain, inducing spatial heterogeneity in the hydration dynamics in the two types of regions of the NALMA peptide. We place our QENS measurements on model biological solutes in the context of other spectroscopic techniques and provide both confirming as well as complementary dynamic information that attempts to give a unifying molecular view of hydration dynamics signatures near peptides and proteins.     

Thermal properties and mixing state of diol-water mixtures studied by calorimetry, large-angle X-ray scattering, and NMR relaxation

Differential scanning calorimetry (DSC) has been performed on aqueous mixtures of three diols, which involve a linear carbon chain, HO-(CH 2) n -OH ( n = 3, 4, and 5), over the whole mole fraction range of diols. The DSC results have shown the alkyl chain parity for the freezing process of the aqueous mixtures: aqueous mixtures of 1,3-propanediol (PrD) and 1,5-pentanediol (PeD) are kept in the supercooled state or vitrified over a wide mole fraction range, while those of 1,4-butanediol (BuD) are easily crystallized. The structure of PrD-water mixtures has been elucidated by using the large-angle X-ray scattering (LAXS) technique. It has been suggested that the structural change of PrD-water mixtures occurs at PrD mole fractions of x PrD = 0.4 and 0.8: in the range of x PrD < or = 0.4 where the tetrahedral-like structure of water predominates, in the range of 0.4 < x PrD < 0.8 where both PrD and water structures coexist, and in the range of x PrD > or = 0.8 where the inherent structure of PrD is mainly formed. (17)O and (1)H NMR relaxation measurements have been made on aqueous mixtures of ethylene glycol (EG, n = 2), PrD, and BuD to clarify the dynamics of H 2 (17)O and diol molecules. The (17)O NMR relaxation rates have suggested that the rotational motion of water molecules is gradually retarded in the diol-water mixtures with increasing diol content and that the restriction of the motion is more remarkable in the order of EG < PrD < BuD. On the basis of all the results, together with comparison with those of methanol-water, ethanol-water, and 1-propanol-water mixtures previously reported, the mixing state of diol-water mixtures has been discussed at the molecular level.     

Thermal diffusion forced Rayleigh scattering setup optimized for aqueous mixtures

We developed a thermal diffusion forced Rayleigh scattering (TDFRS) setup operating at a writing wavelength of 980 nm, which corresponds to an absorption band of water with an absorption coefficient of approximately 0.5 cm(-1). Therefore, aqueous mixtures require no dye to convert the light into heat energy. Especially for aqueous system with a complex phase behavior such as surfactant systems, the addition of a water soluble dye can cause artifacts. The infrared-TDFRS (IR-TDFRS) setup has been validated for water/ethanol mixtures with water weight fractions c = 0.5-0.95 and in a temperature range between T = 15 degrees C to T = 35 degrees C. Comparison with literature data shows an excellent agreement. The addition of a small amount (c(dye) approximately 10(-6) wt) of adsorbing dye at the writing wavelength allows also the investigation of organic mixtures. We investigated the three binary mixtures of dodecane, isobutylbenzene, and 1,2,3,4-tetrahydronaphthalene at a weight fraction of c = 0.5 at a temperature of 25 degrees C and found good agreement with the Soret coefficients, which had been obtained in a benchmark test under the same conditions. Therefore, the presented setup is suitable for the investigation of the thermal diffusion behavior in aqueous and organic mixtures, and in the case of aqueous systems, the addition of a dye can be avoided.     

Dynamic behavior of water within a polymer electrolyte fuel cell membrane at low hydration levels

Protonic conduction across the membrane of a polymer electrolyte fuel cell is intimately related to the dynamic behavior of water present within the membrane. To further the understanding of water dynamics in these materials, quasielastic neutron scattering (QENS) has been used to investigate the picosecond dynamic behavior of water within a perfluorosulfonated ionomer (PFSI) membrane under increasing hydration levels from dry to saturation. Evaluation of the elastic incoherent structure factor (EISF) reveals an increase in the characteristic length-scale of confinement as the number of water molecules in the membrane increases, tending to an asymptotic value at saturation. The fraction of elastic incoherent scattering observed at high Q over all hydration levels is well fit by a simple model that assumes a single, nondiffusing hydronium ion per membrane sulfonic acid site. The quasielastic component of the fitted data indicates confined dynamic behavior for scattering vectors less than 0.7 A(-1). As such, the dynamic behavior was interpreted using continuous diffusion confined within a sphere at Q < 0.7 A(-1) and random unconstrained jump diffusion at Q > 0.7 A(-1). As the number of water molecules in the membrane increases, the characteristic residence times obtained from both models is reduced. The increased dynamical frequency is further reflected in the diffusion coefficients predicted by both models. Between low hydration (2 H2O/SO3H) and saturation (16 H2O/SO3H), the continuous spherical diffusion coefficient changes from 0.46 +/- 0.12 to 1.04 +/- 0.12 (10(-5) cm2/s) and jump diffusion indicates an increase from 1.21 +/- 0.03 to 2.14 +/- 0.08 (10(-5) cm2/s). Overall, the dynamic behavior of water has been quantified over different length scale regimes, the results of which may be rationalized on the basis of the formation of water clusters in the hydrophilic domain that expand toward an asymptotic upper limit with increased hydration.     

Broadband dielectric investigation on poly(vinyl pyrrolidone) and its water mixtures

Broadband dielectric spectroscopy and differential scanning calorimetry measurements have been performed to study the molecular dynamics poly (vinyl pyrrolidone) and its water solutions in a wide range of concentrations (0 wt %20 wt % suggesting that this dynamical process is dominated by water-water interactions. In addition, the temperature dependence of the water relaxation times exhibits a crossover from non-Arrhenius to Arrhenius behavior during cooling throughout the glass transition range, which has been interpreted as due to the constrains imposed by the rigid polymer matrix on the water molecules dynamics.     

Resolution of problems in soft matter dynamics by combining calorimetry and other spectroscopies

In several current important problems in different areas of soft matter physics, controversy persists in interpreting the molecular dynamics observed by various spectroscopies including dielectric relaxation, light scattering, nuclear magnetic resonance, and neutron scattering. Outstanding examples include: (1) relaxation of water in aqueous mixtures, in molecular sieves and silica-gel nanopores, and in hydration shell of proteins; and (2) dynamics of each component in binary miscible polymer blends, in mixtures of an amorphous polymer with a small molecular glassformer, and in binary mixtures of two small molecular glassformers. We show the applications of calorimetry to these problems have enhanced our understanding of the dynamics and eliminated the controversies.     

The Effect of Water upon Deep Eutectic Solvent Nanostructure: An Unusual Transition from Ionic Mixture to Aqueous Solution

The nanostructure of a series of choline chloride/urea/water deep eutectic solvent mixtures was characterized across a wide hydration range by neutron total scattering and empirical potential structure refinement (EPSR). As the structure is significantly altered, even at low hydration levels, reporting the DES water content is important. However, the DES nanostructure is retained to a remarkably high level of water (ca. 42 wt % H₂O) because of solvophobic sequestration of water into nanostructured domains around cholinium cations. At 51 wt %/83 mol % H₂O, this segregation becomes unfavorable, and the DES structure is disrupted; instead, water–water and DES–water interactions dominate. At and above this hydration level, the DES–water mixture is best described as an aqueous solution of DES components.     

Component dynamics in polyvinylpyrrolidone concentrated aqueous solutions

(2)H-nuclear magnetic resonance (NMR) and neutron scattering (NS) on isotopically labelled samples have been combined to investigate the structure and dynamics of polyvinylpyrrolidone (PVP) aqueous solutions (4 water molecules/monomeric unit). Neutron diffraction evidences the nanosegregation of polymer main-chains and water molecules leading to the presence of water clusters. NMR reveals the same characteristic times and spectral shape as those of the slower process observed by broadband dielectric spectroscopy in this system [S. Cerveny et al., J. Chem. Phys. 128, 044901 (2008)]. The temperature dependence of such relaxation time crosses over from a cooperative-like behavior at high temperatures to an Arrhenius behavior at lower temperatures. Below the crossover, NMR features the spectral shape as due to a symmetric distribution of relaxation times and the underlying motions as isotropic. NS results on the structural relaxation of both components-isolated via H/D labeling-show (i) anomalously stretched and non-Gaussian functional forms of the intermediate scattering functions and (ii) a strong dynamic asymmetry between the components that increases with decreasing temperature. Strong heterogeneities associated to the nanosegregated structure and the dynamic asymmetry are invoked to explain the observed anomalies. On the other hand, at short times the atomic displacements are strongly coupled for PVP and water, presumably due to H-bond formation and densification of the sample upon hydration.     

Quasi-elastic neutron scattering study of dimethyl-sulfoxide-water mixtures: probing molecular mobility in a nonideal solution

The translational and rotational motions of water and dimethyl sulfoxide, [DMSO, (CH(3))(2)SO] have been investigated using quasi-elastic neutron scattering. Water-DMSO mixtures at five DMSO mole fractions, chi(DMSO), ranging from 0 to 0.75, were measured. Hydrogen-deuterium substitution was used to extract independently the water proton dynamics (d-DMSO-H(2)O), the DMSO methyl proton dynamics (h-DMSO-D(2)O) and to obtain background corrections (d-DMSO-D(2)O). The translational diffusion of water slows down significantly compared to bulk water at all chi(DMSO)>0. The rotational time constant for water exhibits a maximum at chi(DMSO)=0.33 that corresponds to the observed maximum of the viscosity of the mixture. Data for DMSO can be analyzed in terms of a relatively slow tumbling of the molecule about its center-of-mass in conjunction with random translational diffusion. The rotational time constant for this motion exhibits some dependence on chi(DMSO), while the translational diffusion constant shows no clear variation for chi(DMSO)>0. The results presented reinforce the idea that due to the stronger associative nature of DMSO, DMSO-water aggregates are formed over the whole composition range, disturbing the tetrahedral natural arrangement of the water molecules. As a consequence adding DMSO to water causes a drastic slowing down of the dynamics of the water molecule, and vice versa.     

The effect of the counterion on water mobility in reverse micelles studied by molecular dynamics simulations

In this study, mobility and structure of water molecules in Aerosol OT (bis(2-ethylhexyl) sulfosuccinate, AOT) reverse micelles with water content w0 = 5 and Na+, K+, Cs+ counterions have been explored with molecular dynamics (MD) simulations. Using the Faeder/Ladanyi model (J. Phys. Chem. B, 2000, 104, 1033) of the reverse micelle interior, MD simulations were performed to calculate the self-intermediate scattering function, FS(Q,t), for water hydrogen atoms that could be measured in a quasielastic neutron scattering experiment. Separate intermediate scattering functions FRS(Q,t) and FCMS(Q,t) were determined for rotational and translational motion. We find that the decay of FCMS(Q,t) is nonexponential and our analysis of the MD data indicates that this behavior arises from decreased water mobility for molecules close to the interface and from confinement-induced restrictions on the range of translational displacements. Rotational relaxation also exhibits nonexponential decay, which is consistent with relatively rapid restricted rotation and slower rotational relaxation over the full angular range. Rotational relaxation is anisotropic, with the O-H bond short-time rotational mobility considerably higher than that of the molecular dipole. This behavior is related to the decreased density of water-water hydrogen bonds in the vicinity of the interface compared to core or bulk water. We find that the interfacial mobility of water molecules is quite different for the three counterion types, but that the core mobility exhibits weak counterion dependence. Differences in interfacial mobility are strongly correlated with structural features, especially ion-water coordination, and the extent of disruption by the counterions of the water hydrogen bond network.     

Structure and dynamics of halogenoethanol-water mixtures studied by large-angle X-ray scattering, small-angle neutron scattering, and NMR relaxation

To clarify the structure of solvent clusters formed in halogenoethanol-water mixtures at the molecular level, large-angle X-ray scattering (LAXS) measurements have been made at 298 K on 2,2,2-trifluoroethanol (TFE), 2,2,2-trichloroethanol (TCE), and their aqueous mixtures in the TFE and TCE mole fraction ranges of 0.002 < or = x(TFE) < or = 0.9 and 0.5 < or = x(TCE) < or = 0.9, respectively. The radial distribution functions (RDFs) for TFE-water mixtures have shown that the structural transition from inherent TFE structure to the tetrahedral-like structure of water takes place at x(TFE) approximately 0.2. In the TCE-water mixtures inherent TCE structure remains in the range of 0.5 < or = x(TCE) < or = 1. Small-angle neutron scattering (SANS) experiments have been performed on CF(3)CH(2)OD- (TFE-d(1)-) D(2)O and CF(3)CD(2)OH- (TFE-d(2)-) H(2)O mixtures in the TFE mole fraction range of 0.05 < or = x(TFE) < or = 0.8. The SANS results in terms of the Ornstein-Zernike correlation length have revealed that TFE and water molecules are most heterogeneously mixed with each other in the TFE-water mixture at x(TFE) approximately 0.15, i.e., both TFE clusters and water clusters are most enhanced in the mixture. To evaluate the dynamics of TFE and ethanol (EtOH) molecules in TFE-water and ethanol-water mixtures, respectively, (1)H NMR relaxation rates for the methylene group within alcohol molecules have been measured by using an inversion-recovery method. The alcohol concentration dependence of the relaxation rates for the TFE-water and ethanol-water mixtures has shown a break point at x(TFE) approximately 0.15 and x(EtOH) approximately 0.2, respectively, where the structural transition from alcohol clusters to the tetrahedral-like structure of water takes place. On the basis of the present results, the most likely structure models of solvent clusters predominantly formed in TFE-water and TCE-water mixtures are proposed. In addition, effects of halogenation of the hydrophobic groups on clustering of alcohol molecules are discussed from the present results, together with the previous ones for ethanol-water and 1,1,1,3,3,3-hexafluoro-2-propanol- (HFIP-) water mixtures.     

Water motion in reverse micelles studied by quasielastic neutron scattering and molecular dynamics simulations

Motion of water molecules in Aerosol OT [sodium bis(2-ethylhexyl) sulfosuccinate, AOT] reverse micelles with water content w(0) ranging from 1 to 5 has been explored both experimentally through quasielastic neutron scattering (QENS) and with molecular dynamics (MD) simulations. The experiments were performed at the energy resolution of 85 microeV over the momentum transfer (Q) range of 0.36-2.53 A(-1) on samples in which the nonpolar phase (isooctane) and the AOT alkyl chains were deuterated, thereby suppressing their contribution to the QENS signal. QENS results were analyzed via a jump-diffusion/isotropic rotation model, which fits the results reasonably well despite the fact that confinement effects are not explicitly taken into account. This analysis indicates that in reverse micelles with low-water content (w(0)=1 and 2.5) translational diffusion rate is too slow to be detected, while for w(0)=5 the diffusion coefficient is much smaller than for bulk water. Rotational diffusion coefficients obtained from this analysis increase with w(0) and are smaller than for bulk water, but rotational mobility is less drastically reduced than translational mobility. Using the Faeder/Ladanyi model [J. Phys. Chem. B 104, 1033 (2000)] of reverse micelle interior, MD simulations were performed to calculate the self-intermediate scattering function F(S)(Q,t) for water hydrogens. Comparison of the time Fourier transform of this F(S)(Q,t) with the QENS dynamic structure factor S(Q,omega), shows good agreement between the model and experiment. Separate intermediate scattering functions F(S) (R)(Q,t) and F(S) (CM)(Q,t) were determined for rotational and translational motion. Consistent with the decoupling approximation used in the analysis of QENS data, the product of F(S) (R)(Q,t) and F(S) (CM)(Q,t) is a good approximation to the total F(S)(Q,t). We find that the decay of F(S) (CM)(Q,t) is nonexponential and our analysis of the MD data indicates that this behavior is due to lower water mobility close to the interface and to confinement-induced restrictions on the range of translational displacements. Rotational relaxation also exhibits nonexponential decay. However, rotational mobility of O-H bond vectors in the interfacial region remains fairly high due to the lower density of water-water hydrogen bonds in the vicinity of the interface.     

Dynamics from picoseconds to nanoseconds of trehalose in aqueous solutions as seen by quasielastic neutron scattering

We present a study of the dynamical behavior of trehalose, a cryoprotecting agent, in concentrated aqueous solutions. Dynamics in a wide time range from picoseconds to nanoseconds has been observed using both neutron time of flight and neutron spin-echo techniques. Fast dynamics has been described using a simple diffusion model, while dynamical processes at longer times show a more complex behavior, described by a stretched exponential decay. Obtained relaxation times show a good agreement with data from viscosity measurements on aqueous trehalose solutions by Magazu et al. [Branca, Magazu, Maisano et al., J. Phys.: Condens. Matter 11, 3823 (1999)]. Experimental data provide us with some insight into the cryoprotecting properties and processes of trehalose. We conclude that an increase of the solvent viscosity in embedded biological material due to the production or the presence of trehalose might prevent biomolecules from damage.     

Mutual diffusion in binary mixtures of ionic liquids and molecular liquids by dynamic light scattering (DLS)

The present study shows that dynamic light scattering (DLS) is capable of measuring mutual diffusion coefficients for binary mixtures of ionic liquids (ILs) with different molecular liquids over the complete composition range. Evidence is given that the light scattering signals are related to true molecular binary diffusion. The method stands out due to its ability to work non-invasively in macroscopic thermodynamic equilibrium with reasonable accuracy and within convenient measurement periods. Compared with other techniques, mixtures with distinctly higher viscosities can be probed. For exemplary binary mixtures of 1-ethyl-3-methylimidazolium ethylsulfate ([EMIM][EtSO(4)]) with acetone, acetonitrile, dichloromethane, ethanol, or water as well as of 1-ethyl-3-methylimidazolium methanesulfonate ([EMIM][MeSO(3)]) with acetone, water, or methanol, mutual diffusivity data were measured over a wide range of composition at a temperature of 293.15 K. In general, the mutual diffusivity increases with increasing mole fraction of the molecular liquid and similarities to aqueous solutions of classical inorganic salts can be found. The characteristic behavior of the mutual diffusion coefficients is influenced by the nature of the chosen molecular liquid. For IL water mixtures, low light scattering intensities were observed despite the large refractive index difference of the pure components. The reason for this behavior may be the existence of water clusters in the mixtures. Additional measurements for IL acetone mixtures at temperatures ranging from 278.15 K to 323.15 K showed that the temperature dependence of the mutual diffusivity can be represented by Arrhenius functions and is increasing for decreasing mole fractions of acetone.     

Diffusion of water in clays on the microscopic scale: modeling and experiment

Diffusion of water in montmorillonite clays at low hydration has been studied on the microscopic scale by two quasi-elastic neutron scattering techniques, neutron spin-echo (NSE) and time-of-flight (TOF), and by classical microscopic simulation. Experiment and simulation are compared both directly on the level of intermediate scattering functions, I(Q, t), and indirectly on the level of relaxation times after a model of atomic motion is applied. Regarding the dynamics of water in Na- and Cs-monohydrated montmorillonite samples, the simulation and NSE results show a very good agreement, both indicating diffusion coefficients of the order of (1-3) x 10(-10) m(2) s(-1). The TOF technique significantly underestimates water relaxation times (therefore overestimates water dynamics), by a factor of up to 3 and 7 in the two systems, respectively, primarily due to insufficiently long correlation times being probed. In the case of the Na-bihydrated system, the TOF results are in closer agreement with the other two techniques (the techniques differ by a factor of 2-3 at most), giving diffusion coefficients of (5-10) x 10(-10) m(2) s(-1). Attention has been also paid to the elastic incoherent structure factor, EISF(Q). Simulation has played a key role in understanding the various contributions to EISF(Q) in clay systems and in clearly distinguishing the signatures of "apparent" and true confinement. Indirectly, simulation highlights the difficulty in interpreting the EISF(Q) signal from powder clay samples used in experiments.     

The protein "glass" transition and the role of the solvent

Hydrated proteins undergo a change in their dynamical properties in the neighborhood of a temperature. The change of dynamics has been likened to glass transition of glass-forming substances because similar properties were found. However, a complete understanding of the conformation fluctuations of hydrated proteins and their relation to the dynamics of the solvent is still not available, possibly due to the protein molecules being more complex than ordinary glass-formers. For this reason, we turn our attention to the experimental findings of the dynamics of mixtures of water with simpler glass-formers (small molecules and polymers). Two major relaxation processes have been observed in these aqueous mixtures. One is the structural alpha-relaxation of the hydrophilic glass-former hydrogen bonded to the water, which is responsible for glass transition. The other one is the local secondary beta-relaxation of water in the mixture. Remarkably, these two relaxation processes in aqueous mixtures have analogues in hydrated proteins with the same properties. The conformation fluctuations of the protein and the relaxation of the solvent in hydrated proteins behave like the alpha-relaxation of the hydrophilic glass-former hydrogen bonded to the water and the beta-relaxation of water in other aqueous mixtures, respectively. At low temperatures, the Arrhenius activation energy of the relaxation time of the solvent in a hydrated protein is almost the same as that of the beta-relaxation of water in the glassy states of aqueous mixtures. The Arrhenius T-dependence of the solvent relaxation times no longer holds at temperatures that exceed the "glass" transition temperature of the hydrated protein, defined as the temperature at which the conformation relaxation time is very long. This behavior of the solvent in hydrated proteins is similar to that found in the beta-relaxation of water in aqueous mixtures when crossing the glass transition temperature of the mixture (Capaccioli, S.; Ngai, K. L.; Shinyashiki, N. J. Phys. Chem. B 2007, 111, 8197). Furthermore, the same dynamics were found in mixtures of two van der Waals glass-formers, which are even simpler systems than aqueous mixtures because of the absence of hydrogen bonding. The experimental data of these ideal mixtures of van der Waals glass-formers have been given a satisfactory theoretical explanation. Since the properties of hydrated proteins, aqueous mixtures, and the mixtures of van der Waals liquids are similar, we transfer the theoretical understanding gained in the study of the last system sequentially to the two other increasingly more complex systems.     

Effects of counterion valency on the damping of phonons propagating along the axial direction of liquid-crystalline DNA

The phonon propagation and damping along the axial direction of films of aligned 40 wt % calf-thymus DNA rods are studied by inelastic x-ray scattering (IXS). The IXS spectra are analyzed with the generalized three effective eigenmode theory, from which we extract the dynamic structure factor S(Q,E) as a function of transferred energy E=variant Planck's over 2piomega, and the magnitude of the transferred wave vector Q. S(Q,E) of a DNA sample typically consists of three peaks, one central Rayleigh scattering peak, and two symmetric Stokes and anti-Stokes Brillouin side peaks. By analyzing the Brillouin peaks, the phonon excitation energy and damping can be extracted at different Q values from about 4 to 30 nm(-1). A high-frequency sound speed is obtained from the initial slope of the linear portion of the dispersion relation below Q=4 nm(-1). The high-frequency sound speed obtained in this Q range is 3100 ms, which is about twice faster than the ultrasound speed of 1800 ms, measured by Brillouin light scattering at Q approximately 0.01 nm(-1) at the similar hydration level. Our observations provide further evidence of the strong coupling between the internal dynamics of a DNA molecule and the dynamics of the solvent. The effect on damping and propagation of phonons along the axial direction of DNA rods due to divalent and trivalent counterions has been studied. It is found that the added multivalent counterions introduce stronger phonon damping. The phonons at the range between approximately 12.5 and approximately 22.5 nm(-1) are overdamped by the added counterions according to our model analyses. The intermediate scattering function is extracted and it shows a clear two-step relaxation with the fast relaxation time ranging from 0.1 to 4 ps.