微波消解样品-离子色谱法测定卷烟纸中钠、钾、镁、钙的含量

提出了离子色谱法同时测定卷烟纸中钠、钾、镁和钙含量的方法。卷烟纸试样经硝酸-过氧化氢-氢氟酸微波消解,以IonPac CS16阳离子交换柱为固定相,用0.027 mol.L-1甲烷磺酸溶液作流动相。钠、钾、镁和钙4种元素在30 min内可完全分离;各离子的检出限(3S/N)分别为13,15,8.1,97 mg.L-1。方法的加标回收率在100.9%～108.8%之间,测定值的相对标准偏差(n=5)在0.87%～3.4%之间。     

Aqueous divalent metal-nitrate interactions: hydration versus ion pairing

Nitrate aqueous solutions, Mg(NO(3))(2), Ca(NO(3))(2), Sr(NO(3))(2), and Pb(NO(3))(2), are investigated using Raman spectroscopy and free energy profiles from molecular dynamics (MD) simulations. Analysis of the in-plane deformation, symmetric stretch, and asymmetric stretch vibrational modes of the nitrate ions reveal perturbation caused by the metal cations and hydrating water molecules. Results show that Pb(2+) has a strong tendency to form contact ion pairs with nitrate relative to Sr(2+), Ca(2+), and Mg(2+), and contact ion pair formation decreases with decreasing cation size and increasing cation charge density: Pb(2+) > Sr(2+) > Ca(2+) > Mg(2+). In the case of Mg(2+), the Mg(2+)-OH(2) intermolecular modes indicate strong hydration by water molecules and no contact ion pairing with nitrate. Free energy profiles provide evidence for the experimentally observed trend and clarification between solvent-separated, solvent-shared, and contact ion pairs, particularly for Mg(2+) relative to other cations.     

Complexes of bivalent metal cations in electrospray mass spectra of common organic compounds

In the standard electrospray ionization mass spectra of many common, low molecular mass organic compounds dissolved in methanol, peaks corresponding to ions with formula [3M + Met](2+) (M = organic molecule, Met = bivalent metal cation) are observed, sometimes with significant abundances. The most common are ions containing Mg(2+), Ca(2+) and Fe(2+). Their presence can be easily rationalized on the basis of typical organic reaction work-up procedures. The formation of [3M + Met](2+) ions has been studied using N-FMOC-proline methyl ester as a model organic ligand and Mg(2+), Ca(2+), Sr(2+), Ba(2+), Fe(2+), Ni(2+), Mn(2+), Co(2+) and Zn(2+) chlorides or acetates as the sources of bivalent cation. It was found that all ions studied form [3M + Met](2+) complexes with N-FMOC-proline methyl ester, some of them at very low concentrations. Transition metal cations generally show higher complexation activity in comparison with alkaline earth metal cations. They are also more specific in the formation of [3M + Met](2+) complexes. In the case of alkaline earth metal cations [2M + Met](2+) and [4M + Met](2+) complex ions are also observed. It has been found that [3M + Met](2+) complex ions undergo specific fragmentation at relatively low energy, yielding fluorenylmethyl cation as a major product. [M + Na](+) ions are much more stable and their fragmentation is not as specific.     

Effect of exchangeable cation on the swelling property of 2:1 dioctahedral smectite--a periodic first principle study

We used both localized and periodic calculations on a series of monovalent (Li+, Na+, K+, Rb+, Cs+) and divalent (Mg2+, Ca2+, Sr2+, Ba2+) cations to monitor their effect on the swelling of clays. The activity order obtained for the exchangeable cations among all the monovalent and divalent series studied: Ca2+ > Sr2+ > Mg2+ > Rb+ > Ba2+ > Na+ > Li+ > Cs+ > K+. We have shown that, in case of dioctahedral smectite, the hydroxyl groups play a major role in their interaction with water and other polar molecules in the presence of an interlayer cation. We studied both type of clays, with a different surface structure and with/without water using a periodic calculation. Interlayer cations and charged 2:1 clay surfaces interact strongly with polar solvents; when it is in an aqueous medium, clay expands and the phenomenon is known as crystalline swelling. The extent of swelling is controlled by a balance between relatively strong swelling forces and electrostatic forces of attraction between the negatively charged phyllosilicate layer and the positively charged interlayer cation. We have calculated the solvation energy at the first hydration shell of an exchangeable cation, but the results do not correspond directly to the experimental d-spacing values. A novel quantitative scale is proposed with the numbers generated by the relative nucleophilicity of the active cation sites in their hydrated state through Fukui functions within the helm of the hard soft acid base principle. The solvation effect thus measured show a perfect match with experiment, which proposes that the reactivity index calculation with a first hydration shell could rationalize the swelling mechanism for exchangeable cations. The conformers after electron donation or acceptance propose the swelling mechanism for monovalent and divalent cations.     

Effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water coordination on the structure and properties of L-arginine and zwitterionic L-arginine

Interactions between metal ions and amino acids are common both in solution and in the gas phase. The effect of metal ions and water on the structure of L-arginine is examined. The effects of metal ions (Li(+), Na(+), K(+), Mg(2+), Ca(2+), Ni(2+), Cu(2+), and Zn(2+)) and water on structures of Arg x M(H2O)m , m = 0, 1 complexes have been determined theoretically by employing the density functional theories (DFT) and using extended basis sets. Of the three stable complexes investigated, the relative stability of the gas-phase complexes computed with DFT methods (with the exception of K(+) systems) suggests metallic complexes of the neutral L-arginine to be the most stable species. The calculations of monohydrated systems show that even one water molecule has a profound effect on the relative stability of individual complexes. Proton dissociation enthalpies and Gibbs energies of arginine in the presence of the metal cations Li(+), Na(+), K(+), Mg(2+), Ca(2+), Ni(2+), Cu(2+), and Zn(2+) were also computed. Its gas-phase acidity considerably increases upon chelation. Of the Lewis acids investigated, the strongest affinity to arginine is exhibited by the Cu(2+) cation. The computed Gibbs energies DeltaG(o) are negative, span a rather broad energy interval (from -150 to -1500 kJ/mol), and are appreciably lowered upon hydration.     

Predicting the energy of the water exchange reaction and free energy of solvation for the uranyl ion in aqueous solution

The structures and vibrational frequencies of UO2(H2O)4(2+) and UO2(H2O)5(2+) have been calculated using density functional theory and are in reasonable agreement with experiment. The energies of various reactions were calculated at the density functional theory (DFT) and MP2 levels; the latter provides the best results. Self-consistent reaction field calculations in the PCM and SCIPCM approximations predicted the free energy of the water exchange reaction, UO2(H2O)4(2+) + H2O <--> UO2(H2O)5(2+). The calculated free energies of reaction are very sensitive to the choice of radii (O and H) and isodensity values in the PCM and SCIPCM models, respectively. Results consistent with the experimental HEXS value of -1.19 +/- 0.42 kcal/mol (within 1-3 kcal/mol) are obtained with small cavities. The structures and vibrational frequencies of the clusters with second solvation shell waters: UO2(H2O)4(H2O)8(2+), UO2(H2O)4(H2O)10(2+), UO2(H2O)4(H2O)11(2+), UO2(H2O)5(H2O)7(2+), and UO2(H2O)5(H2O)10(2+), were calculated and are in better agreement with experiment as compared to reactions involving only UO2(H2O)4(2+) and UO2(H2O)5(2+). The MP2 reaction energies for water exchange gave gas-phase results that agreed with experiment in the range -5.5 to +3.3 kcal/mol. The results were improved by inclusion of a standard PCM model with differences of -1.2 to +2.7 kcal/mol. Rearrangement reactions based on an intramolecular isomerization leading to a redistribution of water in the two shells provide good values in comparison to experiment with values of Delta G(exchange) from -2.2 to -0.5 kcal/mol so the inclusion of a second hydration sphere accounts for most solvation effects. Calculation of the free energy of solvation of the uranyl cation yielded an upper bound to the solvation energy of -410 +/- 5 kcal/mol, consistent with the best experimental value of -421 +/- 15 kcal/mol.     

Role of solvation in the reduction of the uranyl dication by water: a density functional study

We have studied the solvation of uranyl, UO(2)(2+), and the reduced species UO(OH)(2+) and U(OH)(2)(2+) systematically using three levels of approximation: direct application of a continuum model (M1); explicit quantum-chemical treatment of the first hydration sphere (M2); a combined quantum-chemical/continuum model approach (M3). We have optimized complexes with varying numbers of aquo ligands (n = 4-6) and compared their free energies of solvation. Models M1 and M2 have been found to recover the solvation energy only partially, underestimating it by approximately 100 kcal/mol or more. With our best model M3, the calculated hydration free energy Delta(h)G degrees of UO(2)(2+) is about -420 kcal/mol, which shifts to about -370 kcal/mol when corrected for the expected error of the model. This value agrees well with the experimentally determined interval, -437 kcal/mol < Delta(h)G degrees < -318 kcal/mol. Complexes with 5 and 6 aquo ligands have been found to be about equally favored with models M2 and M3. The same solvation models have been applied to a two-step reduction of UO(2)(2+) by water, previously theoretically studied in the gas phase. Our results show that the solvation contribution to the reaction free energy, about 60 kcal/mol, dominates the endoergicity of the reduction.     

Effect of group II metal cations on catecholate oxidation.

The unexpected effects of Ca(2+) on the free-radical chain reactions of dopamine, norepinephrine, isoproterenol, and pyrocatechol oxidation are studied using oxygen consumption measurements, EPR-spectroscopy, UV/VIS spectrophotometry, and by potentiometric titration. It is found that the formation of Ca(2+)-catecholate complexes is accompanied by an increase in the dissociation constants (K(ai) ) of their phenolic hydroxyls. At pH>pK(ai) and in the presence of alkaline-earth metal cations, the rate of catecholate oxidation increases (Ca(2+), Mg(2+)> Sr(2+), Ba(2+)), whereas on addition of Zn ions the rate decreases. The effects of Group II metal cations on catecholate autoxidation are concomitant with a transient increase of the EPR signal for metal-semiquinonate complexes. Therefore, the effects of Ca(2+) and other alkaline-earth metal cations on catecholate autoxidation can be defined as 1) additional deprotonation of catechol OH-groups involved in the formation of M(2+)-catecholate complexes, the latter exceeding catechols in the susceptibility to dioxygen-induced oxidation and 2) formation of relatively stable free-radical intermediates responsible for chain propagation.     

Beta-silyl-substituted silaadamantyl,silabicyclo[2.2.2]octyl,silanorbornyl, and 1-silacyclohexyl cations. A theoretical (DFT and GIAO NMR) study

Parent 1-silaadamant-1-yl (1+) and a series of mono-beta-silyl-substituted- (2-Me+, 2-F+, 2-Cl+, 2-Br+), bis-beta-silyl-substituted- (3-Me+), and tris-beta-silyl-substituted (4-Me+)-1-silaadamant-1-yl cations were studied by the DFT method at the B3LYP/6-31G(d,p) level and by GIAO NMR at the B3LYP/ 6-31G(d,p)//B3LYP/6-31G(d,p) level. The geometries, relative energies, NMR chemical shifts, and charge distribution in the bridgehead silylium ions are discussed and compared. The magnitude of the beta-silyl effect (the Si-C-Si+ hyperconjugation) is gauged as a function of structure. Related model studies on the silabicyclo[2.2.2]octyl (5+, 6+, 5a+, and 6a+), silanorbornyl (7+ and 8+), and silacyclohexyl cations (9+ and 10+) were carried out in which the effect of beta-silyl substitution on geometry, stability, and NMR chemical shifts was probed. The acyclic model Me3Si-CH2-Si+(Me)2 (11+) was used to gauge the influence of the twist angle between the p-orbital at Si+ and the C-Si bond on relative stability and on the changes in the 29Si NMR chemical shifts. Finally, interaction of 1+ with H2O and MeOH and 2-Me+ with H2O was also examined. The resulting optimized structures (12+, 13+, and 14+) and the computed NMR chemical shifts are most compatible with the formation of silaoxonium ions.     

Selective interaction of lower rim calix[4]arene derivatives and bivalent cations in solution. Crystallographic evidence of the versatile behavior of acetonitrile in lead(II) and cadmium(II) complexes

The interaction of lower rim calix(4)arene derivatives containing ester (1) and ketone (2) functional groups and bivalent (alkaline-earth, transition- and heavy-metal) cations has been investigated in various solvents (methanol, N,N-dimethylformamide, acetonitrile, and benzonitrile). Thus, 1H NMR studies in CD3OD, C3D7NO, and CD3CN show that the interaction of these ligands with bivalent cations (Mg2+, Ca2+, Sr2+, Ba2+, Hg2+, Pb2+, Cd2+) is only observed in CD3CN. These findings are corroborated by conductance measurements in these solvents including benzonitrile, where changes upon the addition of the appropriate ligand (1 or 2) to the metal-ion salt only occur in acetonitrile. Thus, in this solvent, plots of molar conductance against the ligand/metal cation ratio reveal the formation of 1:1 complexes between these ligands and bivalent cations. Four metal-ion complex salts resulting from the interaction of 1 and 2 with cadmium and lead, respectively, were isolated and characterized by X-ray crystallography. All four structures show an acetonitrile molecule sitting in the hydrophobic cavity of the ligand. The mode of interaction of the neutral guest in the cadmium(II) complexes differs from each other and from that found in the lead(II) complexes and provides evidence of the versatile behavior of acetonitrile in binding processes involving calix(4)arene derivatives. The thermodynamics of complexation of these ligands and bivalent cations in acetonitrile is reported. Thus, the selective behavior of 1 and 2 for bivalent cations is for the first time demonstrated. The role of acetonitrile in the complexation process in solution is discussed on the basis of 1H NMR and X-ray crystallographic studies. It is suggested that the complexation of 1 and 2 with bivalent cations is likely to involve the ligand-solvent adducts rather than the free ligand. Plots of complexation Gibbs energies against the corresponding data for cation hydration show a selectivity peak which is explained in terms of the predominant role played by cation desolvation and ligand binding energy in complex formation involving metal cations and macrocycles in solution. A similar peak is found in terms of enthalpy suggesting that for most cations (except Mg2+) the selectivity is enthalpically controlled. The ligand effect on the complexation process is quantitatively assessed. Final conclusions are given highlighting the role of the solvent in complexation processes involving calix(4)arene derivatives and metal cations.     

N4 ring as a square planar ligand in novel MN4 species

Ab initio (MP2) and density functional theory (DFT) methods are used to examine a series of MN4 compounds, where M is an alkaline-earth cation (Mg2+, Ca2+, Sr2+, Ba2+), and N4(2-) is a six--electron ring. All pyramidal structures except MgN4 are the most energetically favored for all singlet MN4 systems considered here. For MgN4, the CS structure with dicoordinated Mg out of the N4 ring plane is the most stable of all. Among these systems, the pyramidal CaN4, SrN4, BaN4 and the planar C(S) structure containing dicoordinated Ba are stable as singlet molecules due to their significant isomerization or dissociation barriers (21.3-94.1 kcal/mol). Structural, natural bond orbital (NBO), and molecular orbital (MO) analyses indicate that the bonding in the BaN4 system has a larger covalent character as compared with other MN4 systems. In addition, substantial d character is found in the bonding of the MN4 (M = Ca2+, Sr2+, Ba2+) species.     

Heavy water reactions with atomic transition-metal and main-group cations: gas phase room-temperature kinetics and periodicities in reactivity

Reactions of heavy water, D(2)O, have been measured with 46 atomic metal cations at room temperature in a helium bath gas at 0.35 Torr using an inductively coupled plasma/selected ion flow tube tandem mass spectrometer. The atomic cations were produced at ca. 5500 K in an ICP source and were allowed to decay radiatively and thermalize by collisions with Ar and He atoms prior to reaction. Rate coefficients and product distributions are reported for the reactions of fourth-row atomic cations from K+ to Se+, of fifth-row atomic cations from Rb+ to Te+ (excluding Tc+), and of sixth-row atomic cations from Cs+ to Bi+. Primary reaction channels were observed leading to O-atom transfer, OD transfer, and D2O addition. O-Atom transfer occurs almost exclusively (>or=90%) in the reactions with most early transition-metal cations (Sc+, Ti+, V+, Y+, Zr+, Nb+, Mo+, Hf+, Ta+, and W+) and to a minor extent (10%) with one main-group cation (As+). OD transfer is observed to occur only with three cations (Sr+, Ba+, and La+). Other cations, including most late transition and main-group cations, were observed to react with D2O exclusively and slowly by D2O addition or not at all. O-Atom transfer proceeds with rate coefficients in the range of 8.1 x 10(-13) (As+) to 9.5 x 10(-10) (Y+) cm3 molecule(-1)(s-1) and with efficiencies below 0.1 and even below 0.01 for the fourth-row atomic cations V+ (0.0032) and As+ (0.0036). These low efficiencies can be understood in terms of the change in spin required to proceed from the reactant to the product potential energy surfaces. Higher order reactions are also measured. The primary products, NbO+, TaO+, MoO+, and WO+, are observed to react further with D(2)O by O-atom transfer, and ZrO+ and HfO+ react further through OD group abstraction. Up to five D(2)O molecules were observed to add sequentially to selected M+ and MO+ as well as MO2+ cations and four to MO(2)D+. Equilibrium measurements for sequential D(2)O addition to M+ are also reported. The periodic variation in the efficiency (k/k(c)) of the first addition of D(2)O appears to be similar to the periodic variation in the standard free energy (DeltaG degrees) of hydration.     

Theoretical study of interaction of urate with li(+), na(+), k(+), be(2+), mg(2+), and ca(2+) metal cations

The geometries and energetics of complexes of Li(+), Na(+), K(+), Be(2+), Mg(2+), and Ca(2+)metal cations with different possible uric acid anions (urate) were studied. The complexes were optimized at the B3LYP level and the 6-311++G(d,p) basis set. Complexes of urate with Mg(2+), and Ca(2+)metal cations were also optimized at the MP2/6-31+G(d) level. Single point energy calculations were performed at the MP2/6-311++G(d,p) level. The interactions of the metal cations at different nucleophilic sites of various possible urate were considered. It was revealed that metal cations would interact with urate in a bi-coordinate manner. In the gas phase, the most preferred position for the interaction of Li(+), Na(+), and K(+) cations is between the N(3) and O(2) sites, while all divalent cations Be(2+), Mg(2+), and Ca(2+) prefer binding between the N(7) and O(6) sites of the corresponding urate. The influence of aqueous solvent on the relative stability of different complexes has been examined using the Tomasi's polarized continuum model. The basis set superposition error (BSSE) corrected interaction energy was also computed for complexes. The AIM theory has been applied to analyze the properties of the bond critical points (electron densities and their Laplacians) involved in the coordination between urate and the metal cations. It was revealed that aqueous solvation would have significant effect on the relative stability of complexes obtained by the interaction of urate with Mg(2+) and Ca(2+)cations. Consequently, several complexes were found to exist in the water solution. The effect of metal cations on different NH and CO stretching vibrational modes of uric acid has also been discussed.     

磷酸二甲酯阴离子(DMP~-)与一价、二价金属离子 相互作用的理论研究

在B3LYP、HF和MP2水平上运用全电子从头算(AE)和相对论有效实势(RECP)及6-311+G**和LanL2DZ基组计算Ⅰa、Ⅰb、Ⅱa和Ⅱb族金属离子与磷酸二甲酯阴离子(DMP-)的相互作用。 RECP用于除Li+、Be2+外所有的金属离子。 对Na+、K+、Cu+、Mg2+、Ca2+、Zn2+用AE和RECP 2种方法处理。 结果表明:RECP能可靠地用于重金属离子络合物; 二价金属离子络合物(DMP-—M2+)比一价金属离子络合物 (DMP-—M+)稳定;二价金属离子(M2+)可能比一价金属离子(M+)更易使多核苷酸折叠。     

Molecular orbital calculations of ring opening of the isoelectronic cyclopropylcarbinyl radical, cyclopropoxy radical, and cyclopropylaminium radical cation series of radical clocks

Detailed molecular orbital calculations were directed to the cyclopropylcarbinyl radical (1), the cyclopropoxy radical (2), and the cyclopropylaminium radical cation (3) as well as their ring-opened products. Since a considerable amount of data are published about cyclopropylcarbinyl radicals, calculations were made for this species and related ring-opened products as a reference for 2 and 3 and their reactions. Radicals 1-3 have practical utility as "radical clocks" that can be used to time other radical reactions. Radical 3 is of further interest in photoelectron-transfer processes where the back-electron-transfer process may be suppressed by rapid ring opening. Calculations have been carried out at the UHF/6-31G*, MP4//MP2/6-31G*, DFT B3LYP/6-31G*, and CCSD(T)/cc-pVTZ//QCISD/cc-pVDZ levels. Energies are corrected to 298 K, and the barriers between species are reported in terms of Arrhenius E(a) and log A values along with differences in enthalpies, free energies, and entropies. The CCSD(T)-calculated energy barrier for ring opening of 1 is E(a) = 9.70, DeltaG* = 8.49 kcal/mol, which compares favorably to the previously calculated value of E(a) = 9.53 kcal/mol by the G2 method, but is higher than an experimental value of 7.05 kcal/mol. Our CCSD(T)-calculated E(a) value is also higher by 1.8 kcal/mol than a previously reported CBS-RAD//B3LYP/6-31G* calculation. The cyclopropoxy radical has a very small barrier to ring opening (CCSD(T), E(a) = 0.64 kcal/mol) and should be a very sensitive time clock. Of the three series studied, the cyclopropylaminium radical cation is most complex. In agreement with experimental data, bisected cyclopropylaminium radical cation is not found, but instead a ring-opened species is found. A perpendicular cyclopropylaminium radical cation (4) was found as a transition-state structure. Rotation of the 2p orbital in 4 to the bisected array results in ring opening. The minimum onset energy of photoionization of cyclopropylamine was calculated to be 201.5 kcal/mol (CCSD(T)) compared to experimental values of between about 201 and 204 kcal/mol. Calculations were made on the closely related cyclopropylcarbinyl and bicyclobutonium cations. Stabilization of the bisected cyclopropylcarbinyl conformer relative to the perpendicular species is much greater for the cations (29.1 kcal/ mol, QCISD) compared to the radicals (3.10 kcal/mol, QCISD). A search was made for analogues to the bicyclobutonium cation in the radical series 1 and 2 and the radical cation series 3. No comparable species were found. A rationale was made for some conflicting calculations involving the cyclopropylcarbinyl and bicyclobutonium cations. The order of stability of the cyclopropyl-X radicals was calculated to be X = CH2 > X = O > X = NH2+, where the latter species has no barrier for ring opening. The relative rate of ring opening for cyclopropyl-X radicals X = CH2 to X = O was calculated to be 3.1 x 10(6) s(-1) at 298 K (QCISD).     

G-quadruplex formation of thrombin-binding aptamer detected by electrospray ionization mass spectrometry

Electrospray ionization mass spectrometry detected the formation of the G-quadruplex structure of the thrombin-binding aptamer, d(GGTTGGTGTGGTTGG), and established its specific interaction with metal ions. One piece of evidence that the bonding in the gas phase is via the G-quadruplex form is the enhanced binding, with respect to other metal ions, of the aptamer with Sr2+, Pb2+, Ba2+, and K+, which are of similar size. Another is the lack of specific binding with controls in which the G's are replaced with A's. The most convincing evidence is the extent of H/D exchange of the gas-phase aptamer as compared to that bound to K+ and Sr2+. The latter two complexes exchange six and nine fewer H's, indicating a significant increase in protection upon binding to the metals. Mass spectrometry will be an important tool in understanding G-quadruplexes, which are particularly important in DNA telomers.     

Response of a benzoxainone derivative linked to monoaza-15-crown-5 with divalent heavy metals

The response of a monoaza-15-crown-5 with an optically active aminobenzoxazinone moiety to divalent cations was investigated. The crown ether was found to undergo a strong emission shift to the blue when complexed with specific divalent metals that have ionic diameters between 1.9-2.4 A. Consequently the photoactive macrocycle is responsive to Mg(2+), Ca(2+), Ba(2+), Sr(2+), Cd(2+), and particularly responsive to Hg(2+)and Pb(2+). Macrocycle emission spectra are shown to be a function of cation concentration. Alkaline metal cations and smaller transition metals ions such as Ni(2+), Co(2+)and Zn(2+)do not cause significant changes in the macrocycle emission spectra. Emission, absorption, and complex stability constants are determined. Mechanisms of cation selectivity and spectral emission shifts are discussed. Challenges involving immobilization of the macrocycle while preserving its spectral response to cations are explored.     

Effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water coordination on the structure of glycine and zwitterionic glycine

Interactions between metal ions and amino acids are common both in solution and in the gas phase. Here, the effect of metal ions and water on the structure of glycine is examined. The effect of metal ions (Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) and water on structures of Gly.Mn+(H2O)m and GlyZwitt.Mn+(H2O)m (m = 0, 2, 5) complexes have been determined theoretically by employing the hybrid B3LYP exchange-correlation functional and using extended basis sets. Selected calculations were carried out also by means of CBS-QB3 model chemistry. The interaction enthalpies, entropies, and Gibbs energies of eight complexes Gly.Mn+ (Mn+ = Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) were determined at the B3LYP density functional level of theory. The computed Gibbs energies DeltaG degrees are negative and span a rather broad energy interval (from -90 to -1100 kJ mol(-1)), meaning that the ions studied form strong complexes. The largest interaction Gibbs energy (-1076 kJ mol(-1)) was computed for the NiGly2+ complex. Calculations of the molecular structure and relative stability of the Gly.Mn+(H2O)m and GlyZwitt.Mn+(H2O)m (Mn+ = Li+, Na+, K+, Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+; m = 0, 2, and 5) systems indicate that in the complexes with monovalent metal cations the most stable species are the NO coordinated metal cations in non-zwitterionic glycine. Divalent cations Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+ prefer coordination via the OO bifurcated bonds of the zwitterionic glycine. Stepwise addition of two and five water molecules leads to considerable changes in the relative stability of the hydrated species. Addition of two water molecules at the metal ion in both Gly.Mn+ and GlyZwitt.Mn+ complexes reduces the relative stability of metallic complexes of glycine. For Mn+ = Li+ or Na+, the addition of five water molecules does not change the relative order of stability. In the Gly.K+ complex, the solvation shell of water molecules around K+ ion has, because of the larger size of the potassium cation, a different structure with a reduced number of hydrogen-bonded contacts. This results in a net preference (by 10.3 kJ mol(-1)) of the GlyZwitt.K+H2O5 system. Addition of five water molecules to the glycine complexes containing divalent cations Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+ results in a net preference for non-zwitterionic glycine species. The computed relative Gibbs energies are quite high (-10 to -38 kJ mol(-1)), and the NO coordination is preferred in the Gly.Mn+(H2O)5 (Mn+ = Mg2+, Ca2+, Ni2+, Cu2+, and Zn2+) complexes over the OO coordination.     

Effect of Sr2+ association on the tautomerization processes of uracil and its dithio- and diseleno-derivatives

The structures and relative stabilities of the complexes formed by uracil and its thio- and seleno-derivatives with the Sr(2+) cation, in the gas phase, have been analyzed by means of G96LYP density functional theory (DFT) calculations. The attachment of the Sr(2+) cation to the heteroatom at position 4 is preferred systematically. Although the enolic forms of uracil and its derivatives should not be observed in the gas phase, the corresponding Sr(2+) complexes are the most stable. The enhanced stability of these tautomers is two-fold, on the one hand Sr(2+) interacts with two basic sites simultaneously, and on the other hand an aromatization of the six-membered ring takes place upon Sr(2+) association. Sr(2+) attachment also has a clear catalytic effect in the tautomerization processes involving uracil and its derivatives. This catalytic effect increases when oxygen is replaced by sulfur or selenium. The Sr(2+) binding energy with uracil and its derivatives is bigger than the tautomerization barriers connecting the dioxo forms with the corresponding enolic tautomers. Consequently, when associated with Sr(2+), all tautomers are energetically accessible and should all be observed in the gas phase.     

Experimental and theoretical study of the vibrational spectra of 12-crown-4-alkali metal cation complexes

The vibrational, Raman, and IR, spectra of the five 12-crown-4 (12c4) complexes with Li+, Na+, K+, Rb+, and Cs+ alkali metal cations were measured. Except for a small shift of the position of some bands in the vibrational spectra of the Li+ complex, the vibrational spectra of the five complexes are so similar that it is concluded that the five complexes exist in the same conformation. B3LYP/6-31+G* force fields were calculated for six of the eight predicted conformations in a previous report (J. Phys. Chem. A 2005, 109, 8041) of the 12c4-Li+, Na+, and K+ complexes that are of symmetries higher than the C1 symmetry. These six conformations, in energy order, are of C4, Cs, Cs, C(2v), C(2v), and Cs symmetries. Comparison between the experimental and calculated vibrational frequencies assuming any of the above-mentioned six conformations shows that the five complexes exist in the C4 conformation. This agrees with the fact that the five alkali metal cations are larger than the 12c4 ring cavity. The B3LYP/6-31+G* force fields of the C4 conformation of the Li+, Na+ and K+ complexes were scaled using a set of eight scale factors and the scale factors were varied so as to minimize the difference between the calculated and experimental vibrational frequencies. The root-mean-square (rms) deviations of the calculated frequencies from the experimental frequencies were 7.7, 5.6, and 5.1 cm(-1) for the Li+, Na+, and K+ complexes, respectively. To account for the earlier results of the Li+ complex that the Cs conformation is more stable than the C4 conformation by 0.16 kcal/mol at the MP2/6-31+G* level, optimized geometries of the complex were calculated for the C4 and Cs conformations at the MP2/6-311++G** level. The C4 conformation was calculated to be more stable than the Cs conformation by 0.13 kcal/mol.