1,2,4-Thiadiazol derivatives of cytisine alkaloid: solvate formation and phase transitions

1,2,4-Thiadiazol derivatives of cytisine alkaloid—N-(3-methylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl) (1), N-(3-ethylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl) (2), N-(3-hexylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl) (3) cytisine have been crystallized from different solvents and by X-ray and TG–DSC method were studied. By X-ray analysis the structures of the crystal solvate of 2 with dioxane have been determined. By topology represented solvate belongs to tabulate type. In the crystal structure two conformers of the host molecules were determined. By TG–DSC method has been shown, that methyl-, ethyl-, and hexyl cytisine derivatives can exist in two phase forms. But, unlike methyl- and ethyl-derivatives, hexyl-derivative of cytisine not form inclusion compounds.     

Crystalsolvates of <Emphasis Type="Italic">N</Emphasis>-(3-ethylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl)cytisine

The crystal structures of N-(3-ethylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl)cytisine with waters of hydration, water and methanol, and acetone were studied by x-ray diffraction. Three conformers formed by rotation of the 3-ethylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl moiety relative to the cytisine core were detected in the studied crystal structures. Different conformations of N-(3-ethylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl)cytisine and intermolecular H-bonds may have favored formation of different crystal solvates depending on the crystallization conditions. __________ Translated from Khimiya Prirodnykh Soedinenii, No. 4, pp. 375–379, July–August, 2008.     

A new polymorphic form and crystal solvates of N-(3-methylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl)cytisine

By the single-crystal X-ray diffraction the structures of a new polymorphic form and crystal solvates of N-(3-methylthio-1,2,4-thiadiazol-5-yl-aminocarbonylmethyl)cytisine (C₁₆H₁₉N₅O₂S₂) with dioxane and pyridine have been determined. The crystal structures of solvates are isostructural to previously investigated benzene solvated crystal. Crystal solvates are formed at 2:1 ratio of “host” and solvents. Conformations of the host molecules found in the asymmetric unit of crystal solvates are different like it was observed in benzene solvated crystal. A new polymorphic form is obtained from ethyl acetate.     

Pursuing new facts in the coordination capabilities of (1-diaminomethylene)thiourea (HATU): Products of the interaction with transition metal halides – Structural investigations

This work is part of our studies on the reactivity and crystal engineering of (1-diaminomethylene)thiourea (HATU). Structure and other properties of the selected products of the interaction of HATU with transition metal halides, also in the presence of 3% hydrogen peroxide as an oxidizing agent, have been investigated ((1) di-μ-((1-diaminomethylene)thiouron-1-ium)-κ⁴S:S-bis[chlorido((1-diaminomethylene)-thiouron-1-ium-κS)copper(I)] tetrachloride [(C₂H₇N₄S)₄Cu^I₂Cl₂]Cl₄, (2) catena(bis(3,5-diamino-1,2,4-thiadiazol-2-ium)-bis(μ₂-chlorido)-chloridocuprate(II)) [(C₂H₆N₄S)₂(Cu₂Cl₆)]_∞, (3) 3,5-diamino-1,2,4-thiadiazol-2-ium pentachloridoferrate(III) (C₂H₆N₄S)₂[FeCl₅], (4) 3,5-diamino-1,2,4-thiadiazol-2-ium chloride) (C₂H₆N₄S)Cl, (5) 3,5-diamino-1,2,4-thiadiazol-2-ium tetrachloridozincate(II) (C₂H₇N₄S)₂[ZnCl₄]. For (2) also magnetic properties have been characterized. Compound (3) contains unusual pentachloridoferrate(III) anions.     

2‐[4‐Phenyl‐5‐(2‐pyridyl)‐4H‐1,2,4‐triazol‐3‐yl]nicotinic acid: a case of solvent‐dependent polymorphism

The title compound, C₁₉H₁₃N₅O₂, crystallizes in two monoclinic forms depending on the solvent used. From methanol or acetone, a yellow form [(Ia), m.p. 533 K] in the space group P2₁ is obtained, while with ethanol as the solvent, an orange form [(Ib), m.p. 541 K] in the space group Cc results. The conformers observed in the two polymorphs differ primarily in the relative orientation of pyridine/phenyl and triazole rings. Molecules of both polymorphs form chains through carboxyl O—H...N hydrogen bonding; however, in each crystal structure, a different group acts as acceptor, viz. a triazole and a pyridyl N atom for (Ia) and (Ib), respectively. This is the first case of polymorphism observed for crystals of a 3,4,5‐trisubstituted 1,2,4‐triazole derivative.     

Synthesis and cytotoxicity studies of new 1,2,4-thiadiazole derivatives and their zinc complexes

A new polyfunctional ligand of the thiadiazole family was synthesized. Cytotoxic properties with respect to leukemic cell lines, radiation stability, predicted permeability through the blood–brain barrier and cardiotoxicity of the new ligand and its precursor were determined. New zinc complexes with N-{2-[5-(3-chloro-4-methylphenylamino)-1,2,4-thiadiazol-3-yl]-1-methylethyl}-N-(2,2,6,6-tetramethylpiperidin-4-yl)-amine as the ligand have been obtained.     

Synthesis and structure elucidation of 3-methoxy-1-methyl-1H-1,2,4,-triazol-5-amine and 5-methoxy-1-methyl-1H-1,2,4,-triazol-3-amine

Previously it was shown that condensation of dimethyl N-cyanodithioimidocarbonate ( 1a ) with methylhydrazine gave predominantly 1-methyl-5-methylthio-1H-,2,4-triazol-3-amine ( 2 ), which was initially identified erroneously as the regioisomer l-methyl-3-methylthio-1H-1,2,4-triazol-5-amine ( 3 ). We have found that reaction of dimethyl N-cyanoimidocarbonate ( 1b ) with methyl hydrazine affords a high yield of 3-methoxy-1-methyl-1H-1,2,4-triazol-5-amine ( 4 ) rather than the regioisomer 5-methoxy-1-methyl-1H-1,2,4-triazol-3-amine ( 5 ). The structure assignment of 4 was confirmed by X-ray crystallographic analysis of the benzenesulfonyl isocyanate adduct 7 . Triazole 5 was obtained after reacting dimethyl N-cyanothioimidocarbonate ( 1c ) with methylhydrazine.     

Structural study and thermal behavior of novel interaction product of 4-amino-5-(furan-2-yl)-4H-1,2,4-triazole-3-thione with molecular iodine

Abstract

As a part of investigation of thyreostatic activity of mercapto-substituted triazoles, the structure, spectroscopic properties of 4-amino-5-(furan-2-yl)-4H-1,2,4-triazole-3-thione were obtained. 4-amino-5-(furan-2-yl)-4H-1,2,4-triazole-3-thione forms steady charge-transfer complex in dilute chloroform solution, coordinating one iodine molecule (lgβ?=?3.47). The reaction product of 4-amino-5-(furan-2-yl)-4H-1,2,4-triazole-3-thione is presented by uncharged adduct: C₆H₆N₄OS·I₂. The crystal structure of the adduct was studied in detail by single crystal X-ray diffraction. The results of thermogravimetric analysis revealed the stability of adduct in a solid state at the temperature range 50–500?°C.     

Multicomponent solid forms of the uric acid reabsorption inhibitor lesinurad and cocrystal polymorphs with urea: DFT simulation and solubility study

Lesinurad (systematic name: 2‐{[5‐bromo‐4‐(4‐cyclopropylnaphthalen‐1‐yl)‐4H‐1,2,4‐triazol‐3‐yl]sulfanyl}acetic acid, C₁₇H₁₄BrN₃O₂S) is a selective uric acid reabsorption inhibitor related to gout, which exhibits poor aqueous solubility. High‐throughput solid‐form screening was performed to screen for new solid forms with improved pharmaceutically relevant properties. During polymorph screening, we obtained two solvates with methanol (CH₃OH) and ethanol (C₂H₅OH). Binary systems with caffeine (systematic name: 3,7‐dihydro‐1,3,7‐trimethyl‐1H‐purine‐2,6‐dione, C₈H₁₀N₄O₂) and nicotinamide (C₆H₆N₂O), polymorphs with urea (CH₄N₂O) and eutectics with similar drugs, like allopurinol and febuxostat, were prepared using the crystal engineering approach. All these novel solid forms were confirmed by XRD, DSC and FT–IR. The crystal structures were solved by single‐crystal and powder X‐ray diffraction. The crystal structures indicate that the lesinurad molecule is highly flexible and the triazole moiety, along with the rotatable thioacetic acid (side chain) and cyclopropane ring, is almost perpendicular to the planar naphthalene moiety. The carboxylic acid–triazole heterosynthon in the drug is interrupted by the presence of methanol and ethanol molecules in their crystal structures and forms intermolecular macrocyclic rings. The caffeine cocrystal maintains the consistency of the acid–triazole heterosynthons as in the drug and, in addition, they are bound by several auxiliary interactions. In the binary system of nicotinamide and urea, the acid–triazole heterosynthon is replaced by an acid–amide synthon. Among the urea cocrystal polymorphs, Form I (P, 1:1) consists of an acid–amide (urea) heterodimer, whereas in Form II (P2₁/c, 2:2), both acid–amide heterosynthons and urea–urea dimers co‐exist. Density functional theory (DFT) calculations further support the experimentally observed synthon hierarchies in the cocrystals. Aqueous solubility experiments of lesinurad and its binary solids in pH 5 acetate buffer medium indicate the apparent solubility order lesinurad–urea Form I (43‐fold) > lesinurad–caffeine (20‐fold) > lesinurad–allopurinol (12‐fold) ? lesinurad–nicotinamide (11‐fold) > lesinurad, and this order is correlated with the crystal structures.     

Anodic formation of 3,6-diaryl-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazoles and 2(3-aryl-5-methyl-1H-[1,2,4]triazol-1-yl)-5-aryl-1,3,4-thiadiazoles

3,6-Disubstituted 1,2,4-triazolo[3,4-b][1,3,4]thiadiazoles together with the unknown systems 2-(3-aryl-5-methyl-1H-[1,2,4]triazol-1-yl)-5-aryl-1,3,4-thiadiazoles were obtained by anodic oxidation, under aprotic conditions, of aryl aldehyde N-(5-aryl-1,3,4-thiadiazol-2-yl) hydrazones. Mechanistic proposals are given.     

Synthesis of polyazaheterocycles containing linearly bound 1,2,4-thiadiazole using enaminones

A reaction of N-substituted 5-amino-3-(2-oxopropyl)-1,2,4-thiadiazoles with dimethylformamide dimethyl acetal gave 3-(5-amino-1,2,4-thiadiazol-3-yl)-4-(dimethylamino)but-3en-2-ones, whose cyclization with hydrazine, guanidine, 1H-pyrazol-5-amines and 6-aminopyrimidin-4(3H)-ones led to 3-methyl-1H-pyrazole, 4-methylpyrimidin-2-amine, 5-methyl3-arylpyrazolo[1,5-a]pyrimidines, and 5-methyl-2-R-pyrido[2,3-d]pyrimidin-4(3H)-ones containing a 5-amino-1,2,4-thiadiazole fragment linearly bound at position 3.     

Stereoselective synthesis and Lewis acid mediated functionalization of novel 3-methylthio-β-lactams

A proficient etiquette for the stereoselective synthesis of novel 3-methylthio-β-lactams and their Lewis acid mediated functionalization is described. Treatment of 2-methylthioethanoic acid and appropriate imines in the Staudinger reaction leads to the stereocontrolled synthesis of novel trans-3-methylthio-β-lactams in excellent yields. cis-3-Chloro-3-methylthio-β-lactams, obtained from stereoselective chlorination of trans-3-methylthio-β-lactams using N-chlorosuccinimide (NCS) and AIBN, were subjected to Lewis acid (TiCl₄ or SnCl₄) mediated functionalization using various active aromatic, heterocyclic and aliphatic compounds (nucleophiles). This reaction provides an easy access to novel, stereoselective cis-3-monosubstituted-3-methylthio-β-lactams, which further undergo smooth desulfurization with Raney-nickel to afford C-3 cis- and trans-monosubstituted-β-lactams. The cis or trans configuration of the hydrogen/chloro/nucleophile substituent at C-3 was assigned with respect to C4–H.     

Conformational polymorphism in a cobalt(II) dithiocarbamate complex

Two conformational polymorphs of (N,N‐dibutyldithiocarbamato‐κ²S,S′)[tris(3,5‐diphenylpyrazol‐1‐yl‐κN²)hydroborato]cobalt(II), [Co(C₄₅H₃₄BN₆)(C₉H₁₈NS₂)] or [Tp^Ph2Co(S₂CNBu₂)], 1 , are accessible by recrystallization from dichloromethane–methanol to give orthorhombic polymorph 1a , while slow evaporation from acetonitrile produces triclinic polymorph 1b . The two polymorphs have been characterized by IR spectroscopy and single‐crystal X‐ray crystallography at 150 K. Polymorphs 1a and 1b crystallize in the orthorhombic space group Pbca and the triclinic space group P, respectively. The polymorphs have a trans ( 1a ) and cis ( 1b ) orientation of the butyl groups with respect to the S₂CN plane of the dithiocarbamate ligand, which results in an intermediate five‐coordinate geometry for 1a and a square‐pyramidal geometry for 1b . Hirshfeld surface analysis reveals minor differences between the two polymorphs, with 1a exhibiting stronger C—H…S interactions and 1b favouring C—H…π interactions.     

Crystal structure and NMR study of 4-amino-1,2,4-triazolium hexafluoridoniobate(V) and hexafluoridotantalate(V)

4-Amino-1,2,4-triazolium hexafluoridoniobate(V) and hexafluoridotantalate(V) (C₂H₅N₄)MF₆ (M = Nb, Ta) crystallizing in the monoclinic system (space group P2₁/n) are synthesized for the first time and their crystal structures and spectroscopic features are studied by single crystal X-ray diffraction and ¹H and ¹⁹F NMR spectroscopy. The crystal structures of isostructural (C₂H₅N₄)MF₆ compounds are formed of octahedral complex [MF₆]^– anions (M = Nb, Ta) and monoprotonated heterocyclic 4-amino-1,2,4-triazolium cations (C₂H₅N₄)⁺ organized in a three-dimensional structure via N–H···F and N–H···N hydrogen bonds. The character and types of ion motions in the fluoride sublattice of (C₂H₅N₄)MF₆ are determined in a wide temperature range.     

Comparison of non-covalent interactions and spectral properties in 1-methyl-3-methylthio-5-phenyl-1,2,4-triazinium mono- and tetraiodide crystals

The reaction of 1-methyl-3-methylthio-5-phenyl-1,2,4-triazinium (MTPT) iodide with diiodine in a solution leads to monoiodide crystal structure that in excess of iodine gives the unusual tetraiodide anion with two central iodine atoms in disorder. The bonding within the anion has been characterized as I^–…I₂…I^–; the existence of the bound iodine molecule inside has been proven by the characteristic band in experimental and calculated Raman spectra. Non-covalent interactions of MTPT in considered crystal structures are different. Monoiodide anion as a strong electron donor allows the formation of the S…I chalcogen bonds that are absent in tetraiodide structure. The features of halogen bonds within the I₄^2– anion are also performed.

     

Reactions of 3-amino-1,2,4-triazoles with cinnamic aldehydes

The reaction of 3-amino- and 3-amino-5-methylthio-1,2,4-triazoles with cinnamaldehyde takes two directions to form mixtures of 5-[N-(3-phenylpropenylideneamino)]-1H-1,2,4-triazoles and 5-phenyl-4,5,6,7-tetrahydro[1,2,4]triazolo[1,5-a]pyrimidin-7-ols.     

On triazoles. VII Synthesis of novel tri- and tetracyclic ring systems

The ring-closure of the 5-amino-1-(2-aminophenyl)-3-methylthio-1H-1,2,4-triazole derivatives 3 and 4 with different simple and cyclic C₁ components lead to the formation of 1,2,4-triazolo[1,5-α]-1,3,5-benzotriazepines 5–6 , their 4,5-dihydro- 7 , different 5-spiro-homocyclic- 8–13 , and 5-spiro-heterocyclic- 14-15 analogues. The structure of the compounds obtained was proved with the use of their ir, uv, ¹H-nmr and ¹³C-nmr spectra.     

Reaction of 1,3,4-thiadiazol-2,5-dithiol with <Emphasis Type="Italic">N</Emphasis>-acryloyl-substituted derivatives of several alkaloids

Potentially bioactive 2,5-bis derivatives of 1,3,4-thiadiazole with alkaloid moieties were synthesized by reaction of 1,3,4-thiadiazol-2,5-dithiol with N-acryloyl-substituted derivatives of the alkaloids anabasine, cytisine, and D-pseudoephedrine.     

Motion of agglomerates on the surface in the formation of methane hydrate crystals

A study of the formation of a crystal hydrate film CH₄ · 6H₂O on the surface of an immobile solution of methane in water have shown that, at early stages of film formation, hydrate crystals and their agglomerates are in motion at a velocity of 2–5 mm/s caused by crystal growth. Collisions of agglomerates are accompanied by their rotations at a Ω ～ 0.2–2 rad/s rate. The motion of crystals and agglomerates is explained using the hydrodynamic model that takes into account the surface tension and the difference in the pressure exerted by the medium on the growing and nongrowing faces of crystals, which sets them in chemoreactive motion.     

On a new FeOF polymorph: Synthesis and stability

A new polymorph of FeOF (up to now only known in its rutile type structure) was prepared by using a new synthesis approach formally based on anionic exchange using the well-known layered FeOCl as precursor. The synthesis was achieved using [CH₃C(CH₂O–)₂(COO–)B] to vehicle fluorine through the formation of soluble (CH₃)₄N⁺ [CH₃C(CH₂O–)₂(COO–)BF]⁻ and using N,N-dimethylformamide (DMF) as the reacting medium. The XRD pattern of layered FeOF can be indexed with an orthorhombic cell which doubles along the b axis (which is the direction perpendicular to the layers) with respect to that of pristine FeOCl (a = 3.792(1) Å, b = 12.699(1) Å, c = 3.321(1) Å). Both thermal analysis and diffraction indicate similar stability for the layered and rutile polymorphs. Such findings are rationalized through Density Functional Theory calculations. It is found that the energy difference between the more stable rutile and layered polymorphs is practically nul. The origin of the similar stability lies in the fact that although the number of Fe–F and Fe–O bonds is different in the two structures, the strength of both the total number of Fe–O as well as Fe–F bonds are found to be almost identical. Even if the crystal and electronic structures are considerably different, the total bonding and thus, the stability of the two polymorphs, is comparable. The stability of different FeOF rutile type structures is also analyzed.