Structures, energies, and spin-spin coupling constants of methyl-substituted 1,3-diborata-2,4-diphosphoniocyclobutanes: four-member B-P-B-P rings B2P2(CH3)(n)H(8-n), with n = 0, 1, 2, 4

An ab initio study has been carried out to determine the structures, relative stabilities, and spin-spin coupling constants of a set of 17 methyl-substituted 1,3-diborata-2,4-diphosphoniocyclobutanes B(2)P(2)(CH(3))(n)H(8-n), for n = 0, 1, 2, 4, with four-member B-P-B-P rings. The B-P-B-P rings are puckered in a butterfly conformation, in agreement with experimental data for related molecules. Isomers with the CH(3) group bonded to P are more stable than those with CH(3) bonded to B. If there is only one methyl group or if two methyl groups are bonded to two different P or B atoms, isomers with equatorial bonds are more stable than those with axial bonds. However, when two methyl groups are present, the gem isomers are the most stable for molecules B(2)P(2)(CH(3))(2)H(6) with P-C and B-C bonds, respectively. Transition structures present barriers to the interconversion of two equilibrium structures or to the interchange of axial and equatorial positions in the same isomer. These barriers are very low for the isomer with two methyl groups bonded to B in axial positions for the isomer with four axial bonds and for the isomer with geminal B-C bonds at both B atoms. Coupling constants (1)J(B-P), (1)J(P-C), (1)J(B-C), (2)J(P-P), and (3)J(P-C) are capable of providing structural information. They are sensitive to the number of methyl groups present and can discriminate between axial, equatorial, and geminal bonds, although not all do this to the same extent. The one-bond coupling constants (1)J(B-P), (1)J(P-C), and (1)J(B-C) are similar in equilibrium and transition structures, but (3)J(P-C) and (2)J(P-P) are not. These coupling constants and those of the corresponding fluoro-derivatives of the 1,3-diborata-2,4-diphosphoniocyclobutanes demonstrate the great sensitivity of phosphorus coupling to structural and electronic effects.     

Electronic influences on 3J(C,H) coupling constants via -S-, -S(O)- and -SO2-: their determination, calculation and comparison of detection methods

3J(C,H) coupling constants via a sulfur atom in two series of compounds, both including a sulfide, a sulfoxide and a sulfone, were detected experimentally and calculated by quantum mechanical methods. In the first series (1-3) the coupling between a hydrogen, bonded to an sp3 carbon, and an sp2 carbon is treated; the second series (4-6) deals with the coupling between a hydrogen, bonded to an sp3 carbon, and an sp3 carbon. Different pulse sequences (broadband HMBC, SelJres, 1D HSQMBC, J-HMBC-2, selective J-resolved long-range experiment and IMPEACH-MBC) proved to be useful in determining the long-range 3J(C,H) coupling constants. However, the dynamic behaviour of two of the compounds (4 and 6) led to weighted averages of the two coupling constants expected (concerning equatorial and axial positions of the corresponding hydrogens). DFT calculations proved to be useful to calculate not only the 3J(C,H) coupling constants but also the different contributions of FC, PSO, DSO and SD terms; the calculation of the Fermi contact term (FC) was found to be sufficient for the correct estimation of 3J(C,H) coupling constants.     

Probing the proton-transfer coordinate of complexes with F--H...P hydrogen bonds using one- and two-bond spin-spin coupling constants

Scalar coupling constants have been computed using the EOM-CCSD method for equilibrium structures of complexes stabilized by F--H...P hydrogen bonds, as well as structures along the proton-transfer coordinates of these complexes. Variations in the signs and absolute values of (1)J(F--H), (1h)J(H--P) and (2h)J(F--P) have been analyzed and interpreted in terms of changing hydrogen bond type. Of the three phosphorus bases (phosphine, trimethylphosphine and phosphinine) investigated in this study, trimethylphosphine forms the strongest complex with FH, and has the largest two-bond F--P coupling constant. Among the relatively simple phosphorus bases, it would appear to be a leading candidate for experimental NMR study. Similarities and differences are noted between the corresponding coupling constants (J) and the reduced coupling constants (K) across F--H...P and F--H...N hydrogen bonds.     

A 1H NMR and theoretical investigation of the conformations of some monosubstituted cyclobutanes

The complete analysis of the complex (1)H NMR spectra of some monosubstituted cyclobutanes was achieved to give all the (1)H chemical shifts and (n)J(HH) (n = 2, 3 and 4) coupling constants in these molecules. The substituent chemical shifts of the substituents in the cyclobutane ring differ significantly from those in acyclic systems. For example, the OH and the NH(2) groups in cyclobutanol and cyclobutylamine produce a large shielding of the hydrogens of the opposite CH(2) group of the ring compared with little effect on the comparable methylene protons of butane. These effects and the other (1)H shifts in the cyclobutanes were modelled successfully in the CHARGE program. The RMS error (calculated vs observed shifts) for the 34 (1)H shifts recorded was 0.053 ppm. The conformational equilibrium in these compounds between the axial and the equatorial conformers was obtained by comparing the observed and the calculated (4)J(HH) couplings. These couplings in cyclobutanes, in contrast to the corresponding (3)J(HH) couplings, show a pronounced orientation dependence; (4)J(eq-eq) is ca 5 Hz and (4)J(ax-ax) ca 0 Hz. The couplings in the individual conformers were calculated at the B3LYP/EPR-III level. The conformer energy differences ΔG(ax-eq) vary from 1.1 kcal mol(-1) for OH to 0.2 kcal mol(-1) for the CH(2)OH substituent. The values of the conformer energy differences are compared with the previous IR data and the corresponding theoretical values from molecular mechanics (MM) and DFT theory. Generally, good agreement is observed although both the MM and the DFT calculations deviate significantly from the observed values for some substituents.     

Structures, energies, and spin-spin coupling constants of fluoro-substituted 1,3-diborata-2,4-diphosphoniocyclobutanes: four-member B-P-B-P rings B2P2F(n)H(8-n) with n = 0, 1, 2, 4

An ab initio study has been carried out to determine the structures, relative stabilities, and spin-spin coupling constants of a set of 15 fluoro-substituted 1,3-diborata-2,4-diphosphoniocyclobutanes B(2)P(2)F(n)H(8-n), for n = 0, 1, 2, 4, with four-member B-P-B-P rings. Except for B(2)P(2)F(4)H(4) with four fluorines bonded to two borons, these rings are puckered in a butterfly conformation. For a fixed number of fluorines, the isomers with B-F bonds are significantly more stable than those with P-F bonds. As the number of fluorines increases, the energy difference between the most stable isomer and the other isomers increases. Transition structures which interconvert axial and equatorial positions present relatively small inversion barriers. Coupling constants involving (31)P, namely, (1)J(B-P), (1)J(P-F), (2)J(P-P), (2)J(P-F), and (3)J(P-F) are large and are capable of providing structural information. They are sensitive to the number of fluorines present and can discriminate between axial, equatorial, and geminal B-F and P-F bonds, although not all do this to the same extent. (1)J(B-P) and (2)J(P-P) are similar in equilibrium and transition structures. Although transition structures no longer discriminate between axial and equatorial bonds, (1)J(P-F) and (3)J(P-F) remain sensitive to the number of fluorine atoms present.     

1H and 13C NMR chemical shifts and spin-spin coupling constants in trans- and cis-decalins

The NMR parameters characterizing the spectra of trans- and cis-decalins were determined from theoretical calculations and experimental spectra. The calculated values of the shielding constants are in good agreement with the measured chemical shifts, with a small but noticeable difference in accuracy for the bridgehead atoms. Of all the spin-spin coupling constants, only most of (1)J(C,C) and (1)J(C,H) values could be extracted from the spectra, and the corresponding computed values are in good agreement with experiment. It appears that the applied density functional theory (DFT) approach overestimates slightly the J(C,C) coupling and underestimates the differences between one-bond (1)J(C,H) coupling constants. For all these constants [J(C,C), J(C,H) and J(H,H)] through one to three bonds, which could not be obtained experimentally, the predicted values are in good agreement with the general rules relating spin-spin coupling to the number and spatial arrangement of the intervening bonds.     

Resolving an apparent discrepancy between theory and experiment: spin-spin coupling constants for FCCF

Ab initio equation of motion coupled cluster singles and doubles (EOM-CCSD) and second-order polarization propagator approximation (SOPPA) calculations have been performed to evaluate spin-spin coupling constants for FCCF (difluoroethyne). The computed EOM-CCSD value of (3)J(F-F) obtained at the experimental geometry of this molecule supports the previously reported experimental value of 2.1 Hz, thereby resolving an apparent discrepancy between theory and experiment. This coupling constant exhibits a strong dependence on the C-C and C-F distances, and its small positive value results from a sensitive balance of paramagnetic spin-orbit (PSO) and spin-dipole (SD) terms. The three other unique FCCF coupling constants (1)J(C-C), (1)J(C-F), and (2)J(C-F) have also been reported and compared with experimental data. While (1)J(C-F) is in agreement with experiment, the computed value of (2)J(C-F) is larger than our estimate of the experimental coupling constant.     

DFT and NMR parameterized conformation of valeranone

A Monte Carlo random search using molecular mechanics, followed by geometry optimization of each minimum energy structure employing density functional theory (DFT) calculations at the B3LYP/6-31G* level and a Boltzmann analysis of the total energies, generated accurate molecular models which describe the conformational behavior of the antispasmodic bicyclic sesquiterpene valeranone (1). The theoretical H-C-C-H dihedral angles gave the corresponding 1H, 1H vicinal coupling constants using a generalized Karplus-type equation. In turn, the 3J(H,H) values were used as initial input data for the spectral simulation of 1, which after iteration provided an excellent correlation with the experimental 1H NMR spectrum. The calculated 3J(H,H) values closely predicted the experimental values, excepting the coupling constant between the axial hydrogen alpha to the carbonyl group and the equatorial hydrogen beta to the carbonyl group (J(2beta, 3beta)). The difference is explained in terms of the electron density distribution found in the highest occupied molecular orbital (HOMO) of 1. The simulated spectrum, together with 2D NMR experiments, allowed the total assignment of the 1H and 13C NMR spectra of 1.     

Understanding the conformational dependence of spin-spin coupling constants: through-bond and through-space J(31P,31P) coupling in tetraphosphane-1,4-diides [M(L)x]2[P4R4

The characteristic dependence of J(31P,31P) spin-spin coupling constants of alkali metal tetraphosphane-1,4-diides on structure and composition has been analyzed by density functional methods. The computations confirm that the structure of the contact ion pairs is conserved in solution. Calculations on model systems M2P4H4, on naked P4H4(2-) anions, and on models including point charges, show that the role of the cations is mainly structural and to a smaller extent electrostatic. Three of the four J(P,P) coupling constants depend characteristically on the conformation of the anion, which in turn is determined by the substituents R and by cation-anion interactions. Several couplings exhibit a large through-space component and are thus strongly dependent on the relative orientation of nonbonding electron pairs on the phosphorus atoms involved. This is shown by visualization of coupling pathways using the recently introduced coupling energy density (CED), in combination with the electron localization function (ELF).     

Broken-symmetry density functional theory investigation on bis-nitronyl nitroxide diradicals: influence of length and aromaticity of couplers

A series of nitronyl nitroxide (NN) diradicals with linear conjugated couplers and another series with aromatic couplers have been investigated by the broken-symmetry (BS) DFT approach. The overlap integral between the magnetically active orbitals in the BS state has been explicitly computed and used for the evaluation of the magnetic exchange coupling constant (J). The calculated J values are in very good agreement with the observed values in the literature. The magnitude of J depends on the length of the coupler as well as the conformation of the radical units. The aromaticity of the spacer decreases the strength of the exchange coupling constant. The SOMO-SOMO energy splitting analysis, where SOMO stands for the singly occupied molecular orbital, and the calculation of electron paramagnetic resonance (EPR) parameters have also been carried out. The computed hyperfine coupling constants support the intramolecular magnetic interactions. The nature of magnetic exchange coupling constant can also be predicted from the shape of the SOMOs as well as the spin alternation rule in the unrestricted Hartree-Fock (UHF) treatment. It is found that pi-conjugation along with the spin-polarization plays the major role in controlling the magnitude and sign of the coupling constant.     

A DFT study of the interresidue dependencies of scalar J-coupling and magnetic shielding in the hydrogen-bonding regions of a DNA triplex.

Scalar coupling constants and magnetic shieldings in the imino hydrogen-bonding region of Hoogsteen-Watson-Crick T.A-T and C(+).G-C triplets have been calculated as a function of the distance between proton donor and acceptor nitrogen atoms. The Fermi contact contributions to (h2)J((15)N-H...(15)N), (1)J((15)N-(1)H), and (h1)J((1)H...(15)N) were computed using density functional theory/finite perturbation theory (DFT/FPT) methods for the full base triplets at the unrestricted B3PW91/6-311G level. Chemical shifts delta((1)H) and delta((15)N) were obtained at the same level using the gauge including atomic orbital (GIAO) method for magnetic shielding. All three scalar couplings and all three chemical shifts are strongly interrelated and exhibit monotonic changes with base pair separation. These correlations are in conformity with experimental data for a 32-nucleotide DNA triplex. The results suggest that both chemical shifts and coupling constants can be used to gain information on H-bond donor-acceptor distances in nucleic acids. In addition to the DFT/FPT calculations, a simple three-orbital model of the N-H...H bond and a sum-over-states analysis is presented. This model reproduces the basic features of the H-bond coupling effect. In accordance with this model and the DFT calculations, a positive sign for the (h2)J(NN) coupling is determined from an E.COSY experiment.     

13C and 31P NMR studies of configurational and conformational effects in 1-Phenyl-4-phosphorinanones and their 1-selenides

Carbon-13 and ³¹P NMR data are reported for 1-phenyl-4-phosphorinanone and its 1-selenide, as well as for two anancomeric 1-phenyl-3,5-dimethyl-4-phosphorinanones and their 1-selenides. The conformational free energy of the P-phenyl substituent in 1-phenyl-4-phosphorinanone is estimated to be ΔG° = 0.81 kcal mol^?1 (ca 80% axial) in chloroform, and this result is consistent with both ¹³C NMR shielding and coupling data. The γ effects of a single atom substituent on phosphorus are found to be small in the case of selenium; information in the literature indicates significant downfield-shifting γ_e effects due to equatorial oxygen and sulphur substituents in phosphorinanes. In selenides, the shift for the aromatic C-ipso carbon in the axial isomer is further downfield than in the equatorial isomer, an observation not precedented in the literature. In the discussion of P-C coupling data a ‘second order’ Karplus-like relationship is invoked for ³J(PC), which is dependent both on the dihedral angle and on the orientation of the phosphorus lone pair in phosphines. The one-bond P-C-ipso coupling in selenides is identical for all three selenides studied, regardless of the stereochemistry at phosphorus. Similar lack of substantial differentiation is noted for one-bond P-Se coupling. A possible origin of this phenomenon is discussed in terms of diminution of the phosphorus charge contribution to the Fermi contact term. From ³¹P NMR data a high stereodependence of selenylation shifts is apparent, and greater shifts (by ca 20 ppm) are observed when selenium is bound to phosphorus in the more crowded (axial) position. In anancomeric (conformationally biased) phosphines, the isomer with the axial phenyl group has the ³¹P signal at lower field. This is consistent with observations made previously for rigid 1-phenylphosphorinanes.     

Complete 1H and 13C NMR assignments of the epimeric menthane-1-carboxylic acids

Complete NMR analyses with full assignments for (1)H and (13)C NMR spectral data for both epimers of menthane-1-carboxylic acid are described. The NMR properties of the recently synthesized axial isomer had not been previously described, and through use of a variety of 1D and 2D techniques, additional information is provided for the equatorial isomer. As well as assignments of chemical shifts, homonuclear coupling constants were determined for the equatorial isomer and most of coupling constants were measured for the axial isomer.     

Solvent effects on one-bond B-Li coupling constants in boryllithium compounds

EOM-CCSD 11B-7Li coupling constants and B chemical shifts have been computed for Li-diazaborole and its complexes with one H2O or FLi molecule. B-Li coupling constants for a model compound H(2)BLi and its complexes with up to 4 H2O or FLi molecules have also been obtained in an attempt to resolve discrepancies between the computed values of these properties for isolated Li-diazaborole and experimentally determined values for boryllithium in a THF solution. The presence of solvent molecules increases the ion-pair character of the B-Li bond, with the result that 1J(B-Li) decreases systematically as the basicity and the number of solvent molecules increases. In the presence of even a single solvent molecule, the boron chemical shift for Li-diazaborole increases, and approaches the experimental value. The computed results emphasize the role of the solvent in determining these NMR properties.     

Stereochemical dependence of 3JCH coupling constants in 2-substituted 4-t-butyl-cyclohexanone and their alcohol derivatives

Theoretical and experimental studies on (3)J(C2H6eq) NMR spin-spin coupling constants in both the 2-X-4-t-butyl-cyclohexanone (X = H, CH(3), F, Cl, and Br) and in their alcohol derivatives series are reported. Results thus found are rationalized in terms of the transmission of the Fermi contact contribution to such couplings. To this end, dependencies of (3)J(C2H6eq) couplings versus the C(2)-C(1)-C(6) angle are compared in both series for equatorial and axial X orientations. The main trend is described in terms of the rear lobes interaction. Besides, for X = halogen atom in equatorial orientation a rather strong interaction between oxygen and halogen lone pairs is observed, and its influence on (3)J(C2H6eq) couplings is discussed and rationalized in terms of different Fermi contact transmission pathways.     

Stereoelectronic interaction and their effects on conformational preference for 2-substituted methylenecyclohexane: an experimental and theoretical investigation

Conformational preferences for 2-substituted methylenecyclohexanes were determined using (3) J H 2 H 3 spin-spin coupling constants, while stereoelectronic interactions were obtained by means of theoretical calculations and NBO analysis. The conformational equilibrium of compounds studied can be represented by their axial and equatorial conformers, the axial conformers being the most stable form in polar and nonpolar solvents. These conformational preferences were attributed to the hyperconjugative interactions between the pi C-C-->sigma* C-Xax. and sigma C-H-->sigma* C-Xax. orbitals, and the repulsive steric interaction observed between sigma C-H-->n Xeq..     

An experimental and theoretical study of spin-spin coupling in chlorosilanes

An experimental and theoretical study of the absolute value of the one-bond spin-spin coupling constant |(1)J(Si,H)| in SiH(n)Cl(4-n) (n = 0-4) dissolved in THF-d(8) is presented. We found |(1)J(Si,H)| to increase with an increasing number of chlorine substituents, and the quantitative changes were found to differ from the values previously reported for the same compounds dissolved in cyclohexane-d(12). We also report on the variations in |(1)J(Si,H)| as a function of temperature, which we found to be linearly temperature dependent for the chlorine-substituted silanes and temperature independent for SiH(4). Furthermore, the temperature dependence of |(1)J(Si,H)| varied between the different chlorosilanes. Solvent-solute interactions were studied by quantum chemical DFT calculations. The variations in chloro-silane bond lengths upon adduct formation and the different adduct interaction energies may explain the temperature dependences of the coupling constants.     

Platinum(II) Complexes of Cyclic Triphosphenium Ions: a (31)P NMR Spectroscopic and Computational Study

The first transition metal complexes of cyclic triphosphenium ions have been unequivocally identified in solution by (31)P NMR spectroscopy. The ligands coordinate to platinum(II) via the central phosphorus atom, but only when at least one of the outer phosphorus atoms has non-aromatic substituents. Depending on the system, either trans- (the kinetic reaction product) and/or cis- (the thermodynamic reaction product) complexes are formed. The (1)J coupling constants between (195)Pt and the central phosphorus atom of the CTI (P(A)) are small for both cis- and trans-isomers, between 900 and 1300 Hz, whereas other phosphanes in these complexes derived from the platinum(II) starting material show normal (1)J(PtP) values. These results suggest a possible long P-Pt bond between the overall positively charged ligand and the platinum(II) cation. Calculations including predicted (31)P NMR shifts for the CTIs and their Pt(II) complexes largely support our experimental findings.     

Axial and equatorial cyclohexylacyl and tetrahydropyranyl-2-acyl radicals. An experimental and theoretical study

Axial and equatorial cyclohexylacyl and tetrahydropyranyl-2-acyl radicals gave distinct EPR spectra thanks to surprisingly large beta-hydrogen atom hyperfine splittings that enabled them to be characterized and monitored. DFT computations indicated that the axial species (X = CH(2)) had a higher barrier to rotation about the (O)C(alpha)-C(beta) bond. The computed difference Delta H degrees for the axial and equatorial radicals (R = H, X = CH(2)) was 0.8 kcal mol(-)(1).     

Conformational Analysis of C‐Trehaloses Using Molecular Mechanics Calculations

Relaxed‐residue energy maps based on the MM3 force field were computed for the three C‐linked (1‐1) d‐glucosyl disaccharides, C‐trehaloses: the axial–axial linked α,α‐trehalose, the axial–equatorial α,β‐trehalose and the equatorial–equatorial linked β,β‐trehalose. Optimized structures were calculated on a 20°‐grid spacing of the torsional angles about the C‐glycosidic bonds. Boltzman weighted ³J coupling constants were calculated and compared to the experimental values; they are satisfactory. The general shape of the energy maps indicates that α,α‐trehalose is a quite rigid molecule adopting only one conformation around the C‐glycosidic linkage, whereas the other two isomers are rather flexible. Compared to the corresponding O‐disaccharides α,β‐ and β,β‐trehaloses exhibit a larger number of low energy conformers and a larger area of the map energy < 8 kcal/mol. The preferred conformations of the axial C‐glycosidic bond are in agreement with the exo‐anomeric effect. Equatorial C‐ glycosidic bonds are rather flexible, influenced by the polarity of the milieu and the formation of interresidue hydrogen bonds.