Benzene as a selective chemical ionization reagent gas

Dilute mixtures of C₆H₆ or C₆D₆ in He provide abundant [C₆H₆]^+· or [C₆D₆]^+· ions and small amounts of [C₆H₇]⁺ or [C₆D₇]⁺ ions as chemical ionization (CI) reagent ions. The C₆H₆ or C₆D₆ CI spectra of alkylbenzenes and alkylanilines contain predominantly M^+· ions from reactions of [C₆H₆]^+· or [C₆D₆]^+· and small amounts of MH⁺ or MD⁺ ions from reactions of [C₆H₇]⁺ or [C₆D₇]⁺. Benzene CI spectra of aliphatic amines contain M^+·, fragment ions and sample-size-dependent MH⁺ ions from sample ion-sample molecules reactions. The C₆D₆ CI spectra of substituted pyridines contain M^+· and MD⁺ ions in different ratios depending on the substituent (which alters the ionization energy of the substituted pyridine), as well as sample-size-dependent MH⁺ ions from sample ion-sample molecule reactions. Two mechanisms are observed for the formation of MD⁺ ions: proton transfer from [C₆D₆]^+· or charge transfer from [C₆D₆]^+· to give M^+·, followed by deuteron transfer from C₆D₆ to M^+·. The mechanisms of reactions were established by ion cyclotron resonance (ICR) experiments. Proton transfer from [C₆H₆]^+· or [C₆D₆]^+· is rapid only for compounds for which proton transfer is exothermic and charge transfer is endothermic. For compounds for which both charge transfer and proton transfer are exothermic, charge transfer is the almost exclusive reaction.     

New cup-shaped α-cyclodextrin derivatives and a study of their catalytic properties in oxidation reactions

A series of new α-cyclodextrin derivatives with a substituted propylene bridge attached to the 6-O's of the A,D-glucose units are reported. The compounds were prepared from the known 6^A,6^D-di-O-(prop-2-methylidene-1,3-dienyl)-hexadeca-O-benzyl-α-cyclodextrin, which was transformed into 6^A,6^D-di-O-(prop-2-methyl-1,3-dienyl)-α-cyclodextrin, 6^A,6^D-di-O-(prop-2-formyl-2-hydroxy-1,3-dienyl)-α-cyclodextrin, 6^A,6^D-di-O-(prop-2-aminomethyl-2-hydroxy-1,3-dienyl)-α-cyclodextrin, 6^A,6^D-di-O-(prop-2-hydroxymethylidene-1,3-dienyl)-α-cyclodextrin, 6^A,6^D-di-O-(prop-2-formyl-1,3-dienyl)-α-cyclodextrin, 6^A,6^D-di-O-(prop-2-carboxy-1,3-dienyl)-α-cyclodextrin and 6^A,6^D-di-O-(prop-2-methoxycarbonyl-1,3-dienyl)-α-cyclodextrin. The new compounds were evaluated for their ability to affect amine and alcohol oxidations in the presence of hydrogen peroxide.     

The 6Li,6Li-INADEQUATE Experiment: A New Tool for 1D- and 2D-NMR Studies of Organolithium Compounds

The 1D- and 2D-⁶Li, ⁶Li-INADEQUATE experiments are described as new tools for the detection of scalar coupled nonequivalent ⁶Li nuclei in organolithium clusters. Practical applications of these sequences are demonstrated for the ⁶Li-NMR spectra of (E)-1-lithio-2-(2-lithiophenyl)-1-phenylhex-1-ene ( 1 ) and (E)-2-lithio-1-(2-lithiophenyl)-1-phenylpent-1-ene ( 2 ), where signals due to dimers and monomers can be distinguished. The performance of the 2D-⁶Li, ⁶Li-INADEQUATE and the ⁶Li, ⁶Li-COSY-45-LR experiment are compared. The ⁶Li chemical shifts of 1 and 2 are discussed.     

Reactions of Au+ and Au− with benzene and fluorine-substituted benzenes

Reactions of gold anions and cations generated by laser desorption/ionization were studied in the FTICR spectrometer. Au⁻ associated with C₆F₆ to give the novel Au⁻(C₆F₆) complex, whose binding energy was estimated to be 24 ± 4 kcal mol⁻¹ from analysis of the radiative association (RA) kinetics. Au⁺ associated with C₆F₅H to give Au⁺(C₆F₅H), with binding energy estimated to be 31 kcal mol⁻¹. Au⁺ reacted with C₆H₆ to form the well known Au⁺(C₆H₆) and Au⁺(C₆H₆)₂ complexes. The observation of rapid charge transfer from Au⁺(C₆H₆) to C₆H₆ was interpreted as showing that benzene binds more strongly to neutral Au than to Au⁺. The neutral Au–C₆H₆ bond is accordingly concluded to be stronger than about 70 kcal mol⁻¹.     

Synthesis of symmetrically modified α-cyclodextrins: an efficient and easy method

Efficient and simple synthetic methods of designed specific synthons of cyclodextrins are fundamental for the further development of more sophisticated supramolecular devices. Here, a new two step synthesis was proposed for the obtention of the 6^A,6^C,6^E-triazido-6^A,6^C,6^E-trideoxy-6^B,6^D,6^F-tri-O-methylhexakis-(2,3-di-O-methyl)cyclomaltohexaose on a large scale.     

Electronic configurations and isotope shifts of the energy levels of the neutral dysprosium atom

Electronic configurations of the energy levels of the neutral dysprosium atom have been suggested on the basis of isotope shift studies carried out in the first spectrum of dysprosium using highly enriched isotopes excited in liquid-air-cooled hollow cathode lamps and a photoelectric recording Fabry-Perot spectrometer. Isotope shift Δ T(164-160) have been evaluated for 85 even and 82 odd energy levels. The configurations 4f⁹d6s6p, 4f⁹6p6s² and 4f¹⁰6s6d along with two new configurations 4f⁹5d²6p and 4f¹⁰6p² have been assigned to even levels whereas the configurations 4f⁹5d²6s, 4f¹⁰6s6p and 4f¹⁰5d6p have been assigned to some odd energy levels of the neutral dysprosium atom.     

Kernresonanzuntersuchungen an Hexafluoriden

N.M.R. Measurements on Hexafluorides ¹⁹F n.m.r. spectra of natural and ¹²⁹Xe enriched XeF₆, ²³⁸UF₆, ²³⁵UF₆, PtF₆, IrF₆, OsF₆ and AuF₆^? were measured and interpretated. The tetramerisation of XeF₆ at low temperatures can be confirmed.     

Mixed-Ligand Complex Formation Equilibria of Copper(II) with 6-Methylpicolinic Acid and Some Amino Acids

In this work, the ternary complex formation among copper(II), 6-methylpicolinic acid (H6Mepic) as primary ligand, and the amino acids aspartic acid (H₂Asp), glutamic acid (H₂Glu) and histidine (HHis) as secondary ligands, were studied in aqueous solution at 25 °C using 1.0 mol·dm^?3 KNO₃ as the ionic medium. Analysis of the potentiometric data using the least squares computational program LETAGROP indicates formation of the species [Cu(6Mepic)]⁺, Cu(6Mepic)(OH), [Cu(6Mepic)(OH)₂]^?, Cu(6Mepic)₂ and [Cu(6Mepic)₃]^? in the binary Cu(II)–H6Mepic system. In the ternary Cu(II)–H6Mepic–H₂Asp system the complexes [Cu(6Mepic)(H₂Asp)]⁺, Cu(6Mepic)(HAsp), [Cu(6Mepic)(Asp)]^? and [Cu(6Mepic)(Asp)(OH)]^2? were observed. In the case of the Cu(II)–H6Mepic–H₂Glu system the complexes Cu(6Mepic)(HGlu), [Cu(6Mepic)(Glu)]^?, [Cu(6Mepic)(Glu)(OH)]^2? and [Cu(6Mepic)(glu)(OH)₂]^3? were detected. Finally, in the Cu(II)–H6Mepic–HHis system the complexes [Cu(6Mepic)(HHis)]⁺, Cu(6Mepic)(His) and [Cu(6Mepic)(His)(OH)]^? were observed. The species distribution diagrams as a function of pH are briefly discussed.     

Syntheses and structural studies of mononuclear arene ruthenium complexes with nitrogen-based chelating ligands

Dinuclear arene ruthenium complexes [(η⁶-arene)Ru(μ-Cl)Cl]₂ (arene?=?C₆H₆; p ⁱPrC₆H₄Me; C₆Me₆) and monomeric cyclopentadienyl complexes [(η⁵-Cp)Ru(PPh₃)₂Cl] (Cp?=?cyclopentadienyl) react with polypyridyl nitrogen ligands L¹ (3-(pyridin-2-yl)-1H-1,2,4-triazole) and L² (1,3-bis(di-2-pyridylaminomethyl)benzene) in methanol to afford cationic mononuclear compounds [(η⁶-arene)Ru(L¹)Cl]⁺ (arene?=?C₆H₆, 1; p ⁱPrC₆H₄Me, 2; C₆Me₆, 3), [(η⁶arene)Ru(L²)Cl]⁺ (arene?=?C₆H₆, 4; p ⁱPrC₆H₄Me, 5; C₆Me₆, 6), [(η⁵-Cp)Ru(L¹)(PPh₃)]⁺ (7), and [(η⁵Cp)Ru(L²)(PPh₃)]⁺ (8). All cationic mononuclear compounds were isolated as their hexafluorophosphate salts and characterized by elemental analyses, NMR, and IR spectroscopic methods and some representative complexes by UV-Vis spectroscopy. The solid state structures of two derivatives, [6]PF₆ and [7]PF₆, have been determined by the X-ray structure analysis.     

The polarizability of a pair of hydrogen atoms at long range

The coefficients of R^?6 and R^?9 in the long-range expansion of the parallel and perpendicular components of the polarizability of a pair of hydrogen atoms at a separation R have been calculated. The results are A⁽⁶⁾₆ = 2558.59. A⁽⁶⁾_⊥ = 1268.25, A⁽⁸⁾₆ = 90639.5 and A⁽⁸⁾_⊥ = 22010.3 au. The values of A⁽⁶⁾₆ and A⁽⁶⁾₆ and A⁽⁶⁾_| are somewhat larger than previous theoretical estimates and much larger than the classical values of 729 and 182.25 au. The terms in R^?8 arise from distortion associated with the dispersion forces and from the field of the quadrupole moment induced by the field-gradient at each atom.     

Natural-abundance lithium-6 NMR spin–lattice relaxation in some simple organolithium compounds

⁶Li, ⁷Li and ¹³C spin–lattice relaxation and NOE data are reported for methyllithium, butyllithium and phenyllithium with ⁶Li T₁ values found in the order of tens of seconds and their relaxation 2–3 orders of magnitude less efficient than that for ⁷Li. The data indicate that ⁶Li is substantially relaxed by the intramolecular ⁶Li–¹H mechanism, whereas both quadrupolar and ⁶Li–⁷Li dipolar relaxation are minor processes. The non-linearity of the Arrhenius curve for Me⁶Li is compatible with a small spin–rotation contribution. Since ⁶Li in solution behaves essentially as a spin-1/2 nucleus, it represents, in spite of its lower magnetic moment and overall sensitivity, an attractive alternative to ⁷Li NMR.     

N 6-Hydroperoxymethyladenosine: a new intermediate of chemical oxidation of N6-methyladenosine mediated by bicarbonate-activated hydrogen peroxide

N ⁶-Methyladenosine (m⁶A) represents a relatively abundant modification in eukaryotic RNA. Because m⁶A has similar properties to adenosine and a low reactivity, limited research has been focused on this nucleoside. In this study, we revealed an important intermediate in the oxidation of m⁶A through the bicarbonate-activated peroxide system. Over the course of oxidation, we found a new mechanism in which N⁶-hydroxymethyladenosine (hm⁶A), N⁶-formyladenosine (f⁶A) and N⁶-hydroperoxymethyladenosine (oxm⁶A) were intermediate products, and adenosine was the final product. In this study, oxm⁶A was isolated using HPLC and characterized by mass spectrometry, NMR and diphenyl-1-pyrenylphosphine (DPPP) fluorescence detection. This study provides a new modified nucleoside and demonstrates oxidative demethylation of m⁶A by reactive oxygen species at the nucleobase level and in RNA strands.     

Structural and Anion Coordination Features of Macrocyclic Polyammonium Cations in the Solid,Solution and Computational Phases

Abstract

The crystal structures of two hexaaza macrocycles 1,4,7,12,15,18-hexaazacyclodocosane ([22]N₆:1-6H⁺, 6C1^?) and 1,13-dioxa-4,7,10,16,19,22-hexaazacyclotetraeicosane ([24]N₆O₂:2-6H⁺,6CI^?) as their hexa-hydrochloride salts have been determined. 1-6H⁺ binds specifically two CI^? anions above and below the almost planar hexaammonium macrocycle yielding a dinuclear CI^? complex. The hexacation 2-6H⁺ on the other hand interacts preferentially with three CI^? anions of the six present in the solid state. Among the three closest anions, one of them, interacting with four ammonium groups, is located in the centre of the macrocycle which adopts a “pocket-like” conformation. Potentiometric and ³⁵CI NMR experiments demonstrate that 2-6H⁺ also binds CI^? in aqueous solution. Subsequent extensive molecular dynamics computational studies starting from X-ray coordinates show that the solid state structure is representative of the solution conformations for I-6H⁺, whereas the conformations of 2-6H⁺ are strongly affected by intramolecular interactions between the ammonium centres and O-atoms of the ether linkage as well as by intermolecular interactions with H₂O molecules and CI^? counterions.     

New synthesis of K2[TcF6]

A new high yield synthesis of K₂[⁹⁹TcF₆] is given. It is based on eqn (1) and uses 40% aqueous HF as solvent. [⁹⁹TcBr₆]^2? + 6F^? + 6Ag⁺ → [⁹⁹TcF₆]^2? + 6AgBr (1)     

Half-sandwich η-benzene Ru(II) complexes of pyridylpyrazole and pyridylimidazole ligands: Synthesis, spectra, and structure

New series of half-sandwich ruthenium(II) complexes supported by a group of bidentate pyridylpyrazole and pyridylimidazole ligands [(η⁶-C₆H₆)Ru(L²)Cl][PF₆] (1), [(η⁶-C₆H₆)Ru(HL³)Cl][PF₆] (2), [(η⁶-C₆H₆)Ru(L⁴)Cl][PF₆] (3), and [(η⁶-C₆H₆)Ru(HL⁵)Cl][PF₆] (4) [L², 2-[3-(4-chlorophenyl)pyrazol-1-ylmethyl]pyridine; HL³, 3-(2-pyridyl)pyrazole; L⁴, 1-benzyl-[3-(2′-pyridyl)]pyrazole; HL⁵, 2-(1-imidazol-2-yl)pyridine] are reported. The molecular structures of 1-4 both in the solid state by X-ray crystallography and in solution using ¹H NMR spectroscopy have been elucidated. Further, the crystal packing in the complexes is stabilized by C-H?X (X = Cl and π), N-H?Cl, and π-π interactions.     

The fluorobasicities of ReF7 and IF7 as measured by the enthalpy change ΔH°(EF7(g) → EF6+(g) + F−(g))

Iridium hexafluoride oxidizes ReF₆ (via an ReF₆⁺ salt) and at room temperatures IrF₆, ReF₆, ReF₇ and (IrF₅)₄ are each present in the equilibrium mixture. From these and related findings: ΔH°(ReF₆ → ReF₆⁺ + e^?) 1092 ± 27 kj mole^?1(261 ± 6 kcal mole^?1), and thermodynamic data are selected to yield ΔH°(ReF_7(g) → ReF₆⁺_(g) + F^?_(g))=893 ± 33 kj mole^?1(213 ± 8 kcal mole^?1). From observations on the stability of IF₆⁺BF₄^? and the lattice enthalpy evaluation for the salt, ΔH°(IF_7(g) → IF₆⁺_(g) + F^?_(g))= 870 ± 24 kj mole^?1(208 ± 6 kcal mole^?1).     

Naphthalene Exchange in [Re(η6-napht)2]+ with Pharmaceuticals Leads to Highly Functionalized Sandwich Complexes [M(η6-pharm)2]+ (M=Re/99mTc)

Bis-arene sandwich complexes are generally prepared by the Fischer-Hafner reaction, which conditions are incompatible with most O- and N- functional groups. We report a new way for the synthesis of sandwich type complexes [Re(η⁶-arene)₂]⁺ and [Re(η⁶-arene)(η⁶-benzene)]⁺ from [Re(η⁶-napht)₂]⁺ and [Re(η⁶-napht)(η⁶-benzene)]⁺, with functionalized arenes and pharmaceuticals. N-methylpyrrolidine (NMP) facilitates the substitution of naphthalene with the incoming arene. A series of fully characterized rhenium sandwich complexes with simple arenes, such as aniline, as well as with active compounds like lidocaine and melatonin are presented. With these rhenium compounds in hand, the radioactive sandwich complexes [^99mTc(η⁶-pharm)₂]⁺ (pharm=pharmaceutical) can be unambiguously confirmed. The direct labelling of pharmaceuticals with ^99mTc through η⁶-coordination to phenyl rings and the confirmation of the structures with the rhenium homologues opens a path into molecular theranostics.     

Chemical Synthesis of Oligoribonucleotide (ASL of tRNALys T. brucei) Containing a Recently Discovered Cyclic Form of 2-Methylthio-N6-threonylcarbamoyladenosine (ms2ct6A)

The synthesis of the protected form of 2-methylthio-N⁶-threonylcarbamoyl adenosine ( ms²t⁶A) was developed starting from adenosine or guanosine by using the optimized carbamate method and, for the first time, an isocyanate route. The hypermodified nucleoside was subsequently transformed into the protected ms²t⁶A -phosphoramidite monomer and used in a large-scale synthesis of the precursor 17nt ms²t⁶A -oligonucleotide (the anticodon stem and loop fragment of tRNA^Lys from T. brucei). Finally, stereochemically secure ms²t⁶A → ms²ct⁶A cyclization at the oligonucleotide level efficiently afforded a tRNA fragment bearing the ms²ct⁶A unit. The applied post-synthetic approach provides two sequentially homologous ms²t⁶A - and ms²ct⁶A -oligonucleotides that are suitable for further comparative structure–activity relationship studies.     

Stark and Zeeman spectroscopies of 4f 66s6p 7G1-6 levels in Sm I under external electric and magnetic fields

Systematic study of hyperfine structures, Zeeman and Stark effects in Sm I is performed for the lowest ⁷G_1-6 levels belonging to the configuration 4f ⁶6s6p by atomic-beam laser spectroscopy with fluorescence detection. The hyperfine coupling constants of ⁷G_2-6 levels are determined. From the Zeeman splittings for the 4f ⁶6s ^{2 7}F_2-6 ? 4f ⁶6s6p ⁷G_2-6 transitions, g-values are determined for the ⁷G_2.6 levels and the precision is improved by several orders of magnitude. From the Stark splittings for the ⁷F_0-3 ? ⁷G_1-3 transitions, tensor polarizabilities α ₂(J) are determined for the upper ⁷G_1-3 levels. Particularly for the ⁷G₁ level (15 650.55 cm^?1) which has close-lying opposite-parity level, the isotope dependence of α ₂(J) is clearly observed for the first time.     

2′-Deoxy-β-D-ribofuranosides of N6-Methylated 7-Deazaadenine and 8-Aza-7-deazaadenine: Solid-phase synthesis of oligodeoxyribonucleotides and properties of self-complementary duplexes

The syntheses of 7-deaza-N⁶-methyladenine N⁹-(2′-deoxy-β-D -ribofuranoside) ( 2 ) as well as of 8-aza-7-deaza-N⁶-methyladenine N⁸? and N⁹?(2′-deoxyribofuranosides) ( 3 and 4 , resp.) are described. A 4,4′-dimeth-oxylritylation followed by phosphitylation yielded the methyl phosphoramidites 12–14 . They were employed together with the phosphoramidite of 2′-deoxy-N⁶v-methyladenosine ( 15 ) in automated solid-phase oligonucleotide synthesis. Alternating or palindromic oligonucleotides derived from d(A-T)₆ or d(A-T-G-C-A-G-A*-T-C-T-G-C-A) but containing one methylated pyrrolo[2,3-d]pyrimidine or pyrazolo[3,4-d]pyrimidine moiety in place of a N⁶-methylaminopurine (A*) were synthesized. Melting experiments showed that duplex destabilization induced by a N⁶-Me group of 2′-deoxy-N⁶-methyladenosine is reversed by incorporation of 8-aza-7-deaza-2′-deoxy-N⁶-meihyladenosine, whereas 7-deaza-2′-deoxy-N⁶-methyladenostne decreased the T_m value further. Regiospecific phosphodiester hydrolysis of d(A-T-G-C-A-G-m⁶A-T-C-T-G1-C-A) by the endodeoxyribonuclease Dpn I, yielding d(A-T-G-C-A-G-m⁶A) and d(pT-C-T-G-C-A), was prevented when the residue c⁷m⁶A_d ( 2 ), c⁷m⁶z⁸A_d ( 3 ), or c⁷m⁶z⁸A_d′ ( 4 ) replaced m⁶A_d ( 1 ) indicating that N(7) of N⁶-methyladenine is a proton-acceptor site for the endodeoxyribonuclease.