Synthesis and characterization of an anomeric sulfur analogue of CMP-sialic acid

alpha-2,3-Sialyltransferase catalyzes the transfer of sialic acid from CMP-sialic acid (1) to a lactose acceptor. An analogue of 1 was synthesized in which the anomeric oxygen atom was replaced with a sulfur atom (1S). The key step in the synthesis of 1S was a tetrazole-promoted coupling of a cytidine-5'-phosphoramidite with a glycosyl thiol of a protected sialic acid. Compounds 1 and 1S were characterized for their activity in a sialyl transfer assay. The rate of solvolysis in aqueous buffer of analogue 1S was 50-fold slower than that of 1. Analogue 1S was found to be substrate for alpha-2,3-sialyltransferase. The K(m) of 1S was just 3-fold higher than that of 1, while the k(cat) of 1S was 2 orders of magnitude lower compared to 1.     

Crystal engineering of photochromic diarylethene single crystals

Photochromic performance of diarylethene single crystals was controlled by crystal engineering using non-covalent aromatic-aromatic interactions as the directional intermolecular force. A diarylethene derivative with two pentafluorophenyl groups, 1,2-bis(2-methyl-5-pentafluorophenyl-3-thienyl)perfluorocyclopentene (1a), formed stoichiometric co-crystals with benzene (Bz) and naphthalene (Np) by aryl-perfluoroaryl interactions. Face-to-face pi-stacking interactions between the pentafluorophenyl groups of 1a and the aromatic molecules are responsible for 2:1 and 1:1 stoichiometric compositions in 1a/Bz and 1a/Np co-crystals, respectively. The diarylethene underwent thermally stable and photoreversible photochromic reactions in a homo-crystal of 1a and co-crystals 1a/Bz and 1a/Np. The absorption spectra of the photogenerated closed-ring isomers varied depending on the conformation of the diarylethene molecules packed in the crystals. The diarylethene 1a also formed 1:1 stoichiometric co-crystals with different kinds of diarylethenes, 1,2-bis(2-ethyl-5-phenyl-3-thienyl)perfluorocyclopentene (2a) and 1,2-bis[2-methyl-5-(1-naphthyl)-3-thienyl]perfluorocyclopentene (3a). Both co-crystals 1a/2a and 1a/3a showed photochromism. Although 1a, 2a, and 3a underwent efficient photocyclization reactions in their homo-crystals, highly selective photocyclization reactions of 2a or 3a were observed in the co-crystals. The selective reactions were confirmed by HPLC and X-ray crystallography. Excited energy transfers from 1a to 2a and from 1a to 3a are considered to occur and cause the selective reactions.     

Guest-induced assembly of tetracarboxyl-cavitand and tetra(3-pyridyl)-cavitand into a heterodimeric capsule via hydrogen bonds and CH-halogen and/or CH-pi interaction: control of the orientation of the encapsulated guest

The guest- or solvent-induced assembly of a tetracarboxyl-cavitand 1 and a tetra(3-pyridyl)-cavitand 2 into a heterodimeric capsule 1.2 in a rim-to-rim fashion via four intermolecular CO(2)H.N hydrogen bonds has been investigated both in solution and in the solid state. In the (1)H NMR study, a 1:1 mixture of1a and 2a (R = (CH(2))(6)CH(3)) in CDCl(3) gave a mixture of various complicated aggregates, whereas this mixture in CDCl(2)CDCl(2) or p-xylene-d(10) exclusively produced the heterodimeric capsule 1a.2a. It was found that an appropriate 1,4-disubstituted-benzene is a suitable guest for inducing the exclusive formation of 1a.2a in CDCl(3). The ability of a guest to induce the formation of guest-encapsulating heterodimeric capsule, guest@(1a.2a), increased in the order p-ethyltoluene < 1-ethyl-4-methoxybenzene < or = 1-ethyl-4-iodobenzene < or = 1,4-dibromobenzene < 1-iodo-4-methoxybenzene < or= 1,4-dimethoxybenzene < or = 1,4-diiodobenzene. The (1)H NMR study revealed that a CH-halogen interaction between the inner protons of the methylene-bridge rims (-O-H(out)CH(in)-O-) of the 1a and 2a units and the halogen atoms of 1,4-dihalobenzenes and a CH-pi interaction between the methoxy protons of 1,4-dimethoxybenzene and the aromatic cavities of the 1a and 2a units play important roles in the formation of 1,4-dihalobenzene@(1a.2a) and 1,4-dimethoxybenzene@(1a.2a), respectively. A preliminary single-crystal X-ray diffraction analysis of guest@(1b.2b) (R = (CH(2))(2)Ph; guest = 1-iodo-4-methoxybenzene or p-xylene) confirmed that the guest encapsulated in 1b.2b is oriented with the long axis of the guest along the long axis of 1b.2b and that the iodo and the methoxy groups of the encapsulated 1-iodo-4-methoxybenzene are specifically oriented with respect to the cavities of the 2b and 1b units, respectively.     

Effect of cyclodextrin on the intramolecular catalysis of amide hydrolysis

The hydrolysis reaction of phthalamic acids (HOOCArCONHR, R = p-NO(2)Ph 1a, Ph 1b, adamantyl 1c) and N-phenyl maleamic acid 2b was studied in the presence of hydroxypropyl-beta-cyclodextrin (HPCD) in acid solution. The reactions of 1a and 1b were studied also in the presence of beta-cyclodextrin (beta-CD). All the compounds formed inclusion complexes with HPCD, and the association constant was determined from the change in absorption of the substrate when the host is added in the case of 1a (90 M(-)(1)) and 2b (49 M(-)(1)). For 1c ( 4 x 10(4) M(-)(1)) a competition method was used, and for 1b the association equilibrium constant was obtained from the kinetic data (37 M(-)(1)) because it is too reactive for the spectrophotometric method. Both cyclodextrins strongly inhibited the reactions, and analysis of the kinetic data for HPCD indicated that the reactions of complexed 1a, 1b, and 2b are at least 10-30 times slower than in the bulk solution whereas 1c reacts only 4.6 times slower when it is complexed. The inhibition is attributed to changes in the geometry of the substrate due to interaction of the carboxylic group and/or the amide with the OH at the rim of the cyclodextrin. The differences in the relative effect observed for 1c are attributed to the formation of a tighter complex with this substrate.     

Cycloaddition of benzoheteroazepine III Reaction of 2,3-dihydro-1H-15benzodiazepines with dichlorocarbene and stereo-structures of products

Reaction of 2, 3-dihydro-1H-1. 5-benzodiazepines with dichlorocarbene generated in situ using benzyltriethylammonium chloride (TEBA) as a phase transfer catalyst in chloroform-aqueous sodium hydroxide mixture gave mainly 1,2-cycloadducts, cis and trans-1a, 3-disubstituted-1, 1-dichloro-1a, 2,3,4-tetrahydro-1H-azirino[1,2-a][1,5]benzodiazepines (2.3), and formylated 1,2-cycloadducts, trans-1a,3-disubstituted-1, 1-dichloro-4-formyl-1a, 2, 3, 4–1 H-azirino[1, 2-a][1, 5]benzodiacepines (4). The stereo-structures of cycloadducts and the mechanism are also discussed.     

Spectroscopy and femtosecond dynamics of the ring opening reaction of 1,3-cyclohexadiene

The early stages of the ring opening reaction of 1,3-cyclohexadiene to form its isomer 1,3,5-hexatriene, upon excitation to the ultrashort-lived 1 1B2 state, were explored. A series of one-color two-photon ionization/photoelectron spectra reveal a prominent vibrational progression with a frequency of 1350 cm(-1), which is interpreted in a dynamical picture as resulting from the ultrafast wave packet dynamics associated with the ring opening reaction. Photoionization in two-color three-photon and one-color four-photon ionization schemes show an ionization pathway via the same ultrashort-lived 1 1B2 state, and in addition, a series of Rydberg states with quantum defects of 0.93, 0.76, and 0.15, respectively. Using those Rydberg states as probes for the reaction dynamics in a time-resolved pump-probe experiment provides a direct observation of the elusive 2 1A1 state that has been implicated as an intermediate step between the initially excited 1 1B2 state and the ground electronic state. The rise and decay times for the 2 1A1 state were found to be 55 and 84 fs, respectively.     

Reversible control of assembly and disassembly of interlocked supermolecules

Two kinds of interlocked supramolecular complexes that display stimulus-responsive assembly and disassembly have been described. One is a pseudorotaxane driven by hydrogen-bonding interactions between rings 2a and 2b and rods 1a and 1b. The rods contain a binding site for the ring as well as a stimulus-responsive diazo group, both of which are conformationally constrained in parallel by connecting them to a rigid xanthene skeleton. The trans isomer of 1a bearing a rigid binding site cannot form the pseudorotaxanes with the rings 2a and 2b because the neighboring diazophenyl group sterically shields the binding site. However, when trans-1a was converted to the corresponding cis-1a by UV light, the pseudorotaxanes are immediately formed with association constants of 70 +/- 10 M(-1) and (1.1 +/- 0.1) x 10(3) M(-1) for 2a and 2b, respectively, in CDCl3 at 24 +/- 1 degrees C. The pseudorotaxanes are completely disassembled into their molecular component when heated at 80-85 degrees C for 20 min. The assembly and disassembly processes can be reversibly cycled by repeating irradiation and heating alternatively. In the case of the rod 1b that possesses a flexible binding site, both cis and trans isomers can form the corresponding pseudorotaxanes with association constants of (2.0 +/- 0.3) x 10(2) M(-1) for 2a and trans-1b and of (7.4 +/- 0.5) x 10(2) M(-1) for 2a and cis-1b in CDCl3 at 24 +/- 1 degrees C. In this system, therefore, external stimuli can modulate the relative distribution of the pseudorotaxane and its components. Finally, the work was extended to the construction of a kinetically more stable molecular machine based on a rotaxane-like complex 10.11 between a metallocycle 11 and a dumbbell 10. In this system, the complex and its components showed separate sets of the signals, not the averaged, in 1H NMR spectroscopy as expected by the increased kinetic stability.     

Regio- and stereoisomeric control of the aggregation of zinc-chlorins possessing inverted interactive hydroxyl and carbonyl groups.

As models for a self-aggregative, naturally occurring magnesium-chlorin bacteriochlorophyll-d possessing 3(1)-secondary alcoholic hydroxyl and 13(1)-oxo groups, zinc-chlorins were synthesized with 3(1)-oxo and 13(1)-secondary (1) or tertiary hydroxyl groups (2). Compared to the monomers in a tetrahydrofuran solution, diastereomers 13(1)R-1R and 13(1)S-1S gave red-shifted absorption maxima (643 --> 674 nm in 1R and 708 nm in 1S) in 1 v/v% CH(2)Cl(2)-hexane solution, indicating their self-aggregation. Therefore, the positioning of the two groups at 3(1)/13(1) or 13(1)/3(1) on the N21-N23 molecular (Q(y)) axis is not necessarily important for the self-aggregation. The (1)H NMR and CD spectroscopic studies showed that the 674 nm absorbing species of 1R was characterized as a face-to-face "closed" dimer, while the 708 nm absorbing species of 1S was a large oligomer constructed with aggregation of head-to-tail "open" dimers. This diastereomeric control over the aggregation of 1R and 1S is more pronounced than that observed in the regioisomerically 3(1)-secondary alcoholic R/S-diastereomers 3R and 3S. The difference is ascribable to the conformational fixation of the 13(1)-hydroxyl group of the exo five-membered ring in 1. In contrast to self-aggregative 3(1)-tertiary alcoholic 4, both 13(1)-epimers of 13(1)-tertiary alcoholic 2 were monomeric even in nonpolar organic media: the additional 13(1)-methyl group (1 --> 2) drastically suppressed the self-aggregation due to the interference of the methyl group in intermolecular pi-pi interaction.     

Tetrakis- and tris(1-Methyluracil) complexes of Pt(II): formation and properties of a carbon-bonded nucleobase species as well as of heternonuclear derivatives

The reaction of K2PtCl4 with an excess of 1-methyluracilate (1-MeU) in water at 60 degrees C leads to the formation of two major products, K2[Pt(1-MeU-N3)4].10H2O (1) and trans-K[Pt(1-MeU-N3)2(1-MeU-C5)(H2O)].3H2O (2). Addition of CuCl2 to an aqueous solution of 2 yields the mixed-metal complex trans-[PtCl(1-MeU-N3,O4)2(1-MeU-C5,O4)Cu(H2O)].H2O (4). Single-crystal X-ray analysis was carried out for 1 and 4. In both compounds, the heterometals (K+ in 1 and Cu2+ in 4) are bonded to exocyclic oxygens atoms of the 1-MeU ligands, giving rise to intermetallic distances of 3.386(2) and 3.528(2) A in 1 and 2.458(1) A in 4. The shortness of the Pt-Cu separation in 4 is consistent with a dative bond between PtII and CuII. The aqua ligand in 2 is readily substituted by a series of other ligands (e.g., 1-MeC, 9-MeGH, and CN-), as demonstrated by 1H NMR spectroscopy, with 3J(195Pt-1H(6)) coupling constants being sensitive indicators. Acid-base equilibria of 1 and 2 have been studied in detail and reveal some unexpected features: 1 has a relatively high basicity, with protonation starting below pH 5, and first and second pKa values being ca. 3.4 and 0.4, respectively. These pKa values are markedly higher than those of related neutral 2:1 or cationic 1:1 complexes and are attributed to both charge effects (-2 charge of 1) and a favorable stabilization of oxygen-protonated species by the arrangement of four exocyclic oxygen groups of 1-MeU ligands at either sides of the platinum coordination planes. Whereas in 2, H+ affinities of the three uracil ligands are in the normal range, there is a surprisingly low acidity of N(3)H of the C5-bonded uracil with a pKa of approximately 12.2, which compares with 9.75 for free 1-methyluracil. This implies that the C5-bonded PtII does not induce the typical acidifying effect of a PtII metal entity when bonded to a ring nitrogen atom of a neutral nucleobase. Rather, the effect is qualitatively similar to that of a metal ion bonded to N3 of an anionic 1-MeU ligand, which likewise increases its overall basicity as compared to neutral 1-MeUH.     

Synthesis of the core structure of the lipoteichoic acid of Streptococcus pneumoniae

Streptococcus pneumoniae LTA is a highly complex glycophospholipid that consists of nine carbohydrate residues: three glucose, two galactosamine and two 2‐acetamino‐4‐amino‐2,4,6‐trideoxygalactose (AATDgal) residues that are each differently linked, one ribitol and one diacylated glycerol (DAG) residue. Suitable building blocks for the glucose and the AATDgal residues were designed and their synthesis is described in this paper. These building blocks permitted the successful synthesis of the core structure Glcβ(1‐3)AATDgalβ(1‐3)Glcα(1‐O)DAG in a suitably protected form for further chain extension ( 1 b , 1 c ) and as unprotected glycolipid ( 1 a ) that was employed in biological studies. These studies revealed that 1 a as well as 1 lead to interleukin‐8 release, however not via TLR2 or TLR4 as receptor.     

Interpretation of light-scattering spectra in terms of particle displacements

Quasielastic light-scattering spectroscopy is regularly used to examine the dynamics of dilute solutions of diffusing mesoscopic probe particles in fluids. For probes in a simple liquid, the light-scattering spectrum is a simple exponential; the field correlation function g(1)(q,tau) of the scattering particles is related to their mean-square displacements X2 identical with [(delta x(tau))2] during tau via g(1)(q,tau) = exp(-1/2 q2X2). However, demonstrations of this expression refer only to identical Brownian particles in simple liquids and show that if the form is correct then it is also true for all tau that g(1)(q,tau) = exp(-gamma tau), a pure exponential in tau. In general, g(1)(q,tau) is not a single exponential in time. A correct general form for g(1)(q,tau) in terms of the X(2n), replacing the incorrect exp(-1/2 q2X2), is obtained. A simple experimental diagnostic determining when the field correlation function gives the mean-square displacement is identified, namely, g(1)(q,tau) only reveals X2 if g(1)(q,tau) is a single exponential in tau. Contrariwise, if g(1)(q,tau) is not a single exponential, then g(1)(q,tau) depends not only on X2 but on all higher moments X(2n). Corrections to the crude approximation g(1)(q,tau) = exp(-1/2 q2X2) closely resemble the higher spectral cumulants from a cumulant expansion of g(1)(q,tau).     

Chemistry of siloles. The reactions of siloles with organolithium reagents

The chemical behaviour of siloles toward various organolithium reagents in THF has been investigated. The reaction of 1-methyl-1-(trimethylsilyl)-, 1-phenyl-1-(trimethylsilyl)- and 1,1-bis(trimethylsilyl)dibenzosilole (I, II and III) with a large excess of an alkyllithium such as methyllithium or butyllithium afforded 1,1-dialkyldibenzosiloles in quantitative yields. Treatment of I with an excess of phenyllithium gave a mixture of 1-methyl-1-phenyl- and 1,1-diphenyldibenzosilole quantitatively, while with an excess of tert-butyllithium, I afforded 1,1-dimethyl- and 1-tert-butyl-1-methyldibenzosilole in low yield. Similar treatment of I and II with 1 equiv. of methyl- or butyl-lithium yielded a mixture of the corresponding mono- and dialkyl-substituted dibenzosiloles. 1-Methyl-3,4-diphenyl-1,2,5-tris(trimehylsilyl)silole reacted with methyllithium in THF to give 1,1-dimethyl-3,4-diphenyl-2,2,5-tris(trimethylsilyl) silole. Similarly, both 2,4-diphenyl-1,1,3,5-tetrakis(trimethylsilyl)silole and 4,5-diphenyl-1,1,2,3-tetrakis(trimethylsilyl)silole with methyllithium afforded two isomers of 1-methyl-2,4-diphenyl-1,2,3,5-tetrakis(trimethylsilyl)-1-silacyclopent-3-ene in a ratio of 3 : 2 in high yields.     

Fluorescence spectroscopic properties and crystal structure of a series of donor-acceptor diphenylpolyenes

A series of p-nitro-p'-alkoxy(OR)-substituted (E,E,E)-1,6-diphenyl-1,3,5-hexatrienes (1a, R = Me; 1b, R = Et; 1c, R = n-Pr; 1d, R = n-Bu) were prepared. The absorption and fluorescence spectra in solution were almost independent of the alkoxy chain length. The absorption maximum showed only a small dependence on the solvent polarity, whereas the fluorescence maximum red-shifted largely as the polarity increased. The solid-state absorption and fluorescence spectra were red-shifted relative to those in low polar solvents and were clearly dependent on the alkoxy chain length. The fluorescence maxima for the crystals of 1b and 1d were observed at 635-650 nm, which were red-shifted by 40-50 nm relative to those for 1a and 1c. The Stokes shifts were all relatively small (3000-3500 cm-1). For all four compounds, the fluorescence decay curves in the solid state were able to be analyzed by single-exponential fitting to give the lifetimes of 1.1-1.3 ns. This indicates that the emission of 1a-d is not originated from an excimer or molecular aggregates, but from only one emitting monomeric species. The fluorescence quantum yields of 1a-d were considerably high compared with the values for organic solids, which is consistent with their monomeric origin of emission. Single-crystal X-ray structure analyses of 1a, 1c, and 1d showed that the crystal packing was dependent on the alkoxy chain length. The crystals of 1a and 1c had herringbone structure, whereas that of 1d had pi-stacked structure. Strong pi-pi interaction in the crystal of 1d would be the cause of the spectral red shifts relative to those for 1a and 1c. No observation of excimer fluorescence from crystal 1d can be attributed to the limited overlap between the pi-planes of the molecules due to its "slipped-parallel" structure.     

Origin of the diastereoselection in the indium-mediated addition of haloallylic sulfones to aldehydes

[reaction: see text] The R(1) substituents at C(2) of the haloallylic sulfones 1 play a pivotal role in controlling the diastereoselectivity of the indium-mediated addition reaction to benzaldehyde to produce the homoallylic alcohols 3. The R(1) Me group of 1 prefers the chair form in the In-coordinated six-membered cyclic transition state to give anti-3a, and the R(1) Ph group of 1 favors the twist boat form to give syn-3n, both in a high 13:1 selectivity.     

Copper trafficking mechanism of CXXC-containing domains: insight from the pH-dependence of their Cu(I) affinities

Copper is trafficked to cellular destinations by homeostatic proteins that also prevent adverse reactivity of the metal. The copper metallochaperone HAH1 (human Atx1) binds Cu(I) via a CXXC motif on loop1/α1 of a βαββαβ ferredoxin-like structure. A similar fold constitutes each of the six metal-binding domains (MBDs) of the two P-type ATPases (Menkes and Wilson disease proteins), the destination for copper bound to HAH1. In this work we have investigated the influence of pH on copper trafficking between HAH1 and the first MBD of the Menkes protein (MNK1). Cu(I) affinities of 5.6 × 10(17) and 3.6 × 10(17) M(-1) have been determined at pH 7.0 for HAH1 and MNK1, respectively, from competition titrations with the chromophoric Cu(I) ligand bathocuproine disulfonate. The mutation of Lys60 on loop5 of HAH1 to Ala (the corresponding residue is Phe67 in MNK1) results in a 3-fold lowering of the affinity for Cu(I) at pH 7.0. The Cu(I) affinity of WT HAH1 exhibits a different pH-dependence compared to MNK1 and Lys60Ala HAH1. This arises because the pK(a) of the second Cys ligand in the CXXC motif of HAH1 is 1.5 pH units lower due to stabilization of the thiolate via a hydrogen-bonding interaction with the side chain of Lys60. The thermodynamic gradient for Cu(I) transfer between HAH1 and MNK1 depends on pH. The decrease in the pK(a) of the Cys ligand in HAH1 can also influence the kinetics of Cu(I) transfer.     

Studies of intermediates formed under the conditions of preparative electroreduction of naphthalene 1-Nitro-3,6,8-Trisulfo acid

The effect is studied of the conditions of preparative reduction of naphthalene 1-nitro-3,6,8-trisulfo acid, particularly, the cathode material, temperature, and current density on the yield of intermediate naphthalene 1-hydroxylamino-3,6,8-trisulfo acid. It is shown that formation of naphthalene 1-hydroxy-lamino-3,6,8-trisulfo acid in reaction solutions results not only in a decrease in the yield of target naphthalene 1-amino-3,6,8-trisulfo acid, but also in a decrease in the quality of the latter, which is manifested in a decrease in the yield into its conversion to naphthalene 1-amino-8-oxy-3,6-disulfo acid. Conditions are found for preparative reduction of naphthalene 1-nitro-3,6,8-trisulfo acid providing the lowest yield of naphthalene 1-hydroxylamino-3,6,8-trisulfo acid in reaction solutions.     

Mechanisms of the Photochemical Rearrangement of Diphenyl Ethers

The mechanism of the photochemical rearrangement of diphenyl ether (1a) was studied. Irradiation of 1a in ethanol gave 2-phenylphenol (2, 42%) and 4-phenylphenol (3, 11%) as rearrangement products, in addition to phenol (4, 30%) and benzene (5, 25%) as diffusion products. Cross-coupling experiments employing [(2)H(10)]1a demonstrated that the formation of 2- and 4-phenylphenol was an intramolecular process. Irradiation of 1a in benzene or in toluene gave biphenyls in good yields. The combined yields of rearrangement products (2and 3) increased with increase of solvent viscosity, with a concomitant decrease in the formation of 4. All the results can be rationalized in terms of excitation of 1a to the singlet state and dissociation to a radical pair intermediate involving phenoxy and phenyl radicals. Intramolecular recombination of these radicals gives rearrangement products, and escape followed by hydrogen abstraction from the solvent gives diffusion products. When position 4 of 1a was occupied by an electron-donating substituent (1b-e), aryloxy-phenyl bond cleavage to give the corresponding rearrangement products prevailed over phenoxy-aryl bond cleavage. The opposite was the case for substrates with an electron-withdrawing substituent at position 4 (1h,i).     

Regiochemistry of the cycloaddition of nitrilium N-phenylimides to dibenzalacetone: A reinvestigation

Reaction of benzonitrilium N-phenylimide 3a with dibenzalacetone 1 yielded a mixture of the mono- and biscycloadducts 8a and 11a in a 1:1 ratio. A similar reaction of 1 with ethoxycarbonylnitrilium N-phenylimide 3b afforded a mixture of the cycloadducts 7b , 8b , and 12b in a 1:3:6 ratio, respectively. The structures of these products were established by spectral analyses and chemical transformations. The results invalidate the previously reported structure 4a assigned for the biscycloadduct isolated from the reaction of 3a with 1 . © 1996 John Wiley & Sons, Inc.     

Homophilic interaction of the L1 family of cell adhesion molecules

Homophilic interaction of the L1 family of cell adhesion molecules plays a pivotal role in regulating neurite outgrowth and neural cell networking in vivo. Functional defects in L1 family members are associated with neurological disorders such as X-linked mental retardation, multiple sclerosis, low-IQ syndrome, developmental delay, and schizophrenia. Various human tumors with poor prognosis also implicate the role of L1, a representative member of the L1 family of cell adhesion molecules, and ectopic expression of L1 in fibroblastic cells induces metastasis-associated gene expression. Previous studies on L1 homologs indicated that four N-terminal immunoglobulin-like domains form a horseshoe-like structure that mediates homophilic interactions. Various models including the zipper, domain-swap, and symmetry-related models are proposed to be involved in structural mechanism of homophilic interaction of the L1 family members. Recently, cryo-electron tomography of L1 and crystal structure studies of neurofascin, an L1 family protein, have been performed. This review focuses on recent discoveries of different models and describes the possible structural mechanisms of homophilic interactions of L1 family members. Understanding structural mechanisms of homophilic interactions in various cell adhesion proteins should aid the development of therapeutic strategies for L1 family cell adhesion molecule-associated diseases.     

Synthesis of nonaphenylenes and dodecaphenylenes using electron-transfer oxidation of Lipshutz cuprates and formation of nanostructural materials from hexadodecyloxynonaphenylene

Nonaphenylenes and dodecaphenylenes have been synthesized by using electron-transfer oxidation of Lipshutz cuprates with duroquinone. Oxidation of the Lipshutz cuprate derived from 4,4'-dibromo-o-terphenyl 3a in THF produced nonaphenylene 1a in 46% yield, whereas the similar oxidation of the Lipshutz cuprates derived from 4,4'-diiodo-4',5'-dialkyl-o-terphenyls 3b-d in ether afforded the corresponding nonaphenylenes 1b-d and dodecaphenylenes 2b-d in moderate total yields. In the case of 4,4'-diiodo-4',5'-didodecyloxy-o-terphenyl 3e as the starting material, oxidation of the corresponding Lipshutz cuprate in ether or THF only led to the formation of nonaphenylene 1e. Both nonaphenylenes 1a-e and dodecaphenylenes 2b-d are unreactive to light, atmospheric oxygen, and prolonged heating. These oligophenylenes showed strong UV absorption and fluorescent emission and exhibited some redox properties on CV analysis. Moreover, hexadodecyloxynonaphenylene 1e exhibits different nanostructures on the surface and in solution to form a film by casting a solution of 1e in cyclohexane, benzene, chloroform, THF, or diisopropyl ether (IPE) and nanofibers from IPE-MeOH (1:1), indicating different absorption and emission spectra and XRD patterns. The absorption maxima of THF solution, fiber, and film are in the order of 1e film (315 nm) > fiber (302 nm) > solution (295 nm), whereas the emission maxima are in the order of 1e fiber (425 m) > solution (418 nm) > film (401 nm). XRD analysis revealed that 1e aligns laterally on a glass or silicon surface to form a thin film with a lamella structure; however, it forms a nanofiber with a Lego-like stacking structure without pi-pi stacking interaction of the aromatic rings. Reflecting the different nanostructures of the 1e film and fiber, a spin-coated 1e film is found to be effective in detecting the vapor of explosives due to the intercalation of nitroaromatics to the cracked surface of the loosely stacked 1e. In contrast, the 1e fiber is not effective in detection of nitroaromatics but exhibits fluorescence anisotropy. The maximum fluorescence intensity is obtained in a direction perpendicular to the longitudinal axis of the fiber, indicating the stacking direction to be parallel to the longitudinal axis of the fiber.