N7-DNA: Synthesis and Base Pairing of Oligonucleotides containing 7-(2-Deoxy-β -D-erythro-pentofuranosyl)adenine (N7Ad)

The synthesis of oligonucleotides containing 7-(2-deoxy-β -D -erythro-pentofuranosyl)adenine (N⁷A_d; 1 ) is described. Compound 1 was obtained from the precursor 4-amino-1H -imidazole-5-carbonitrile 2-deoxyribonucleoside 6 and was found to be much more labile than A_d. The N⁶-benzoyl protecting group (see 8 ) destabilized the N-glycosylic bond further and was difficult to remove by NH₃-catalyzed hydrolysis. Therefore, a (dimethyl-amino)methylidene residue was introduced (→ 9 ). Amidine 9 was blocked at OH? C(5′) with the dimethoxytrityl residue ((MeO)₂Tr), and phosphonate 4 as well as phosphoramidite 5 were prepared under standard conditions. Phosphonate 4 was employed in solid-phase oligonucleotide synthesis. Homooligonucleotides as well as self-complementary oligonucleotides were prepared. The oligomer d[(N⁷A)₁₁-A] ( 11 ) formed a duplex with d(T₁₂) ( 13 ). Antiparallel chain polarity and reverse Watson-Crick base pairing was deduced from duplex formation of the self-complementary d[(N⁷A)₈-T₈] ( 14 ).     

Nucleotide Coupling in Reverse Micelles

Nucleotide coupling was investigated in reverse micelles formed by (cetyl)trimethylammonium bromide (CTAB), in hexane/pentan-1-o1. In particular, the coupling of 2′ -deoxy-5′-O-methylcytidine 3′ O-phosphate, prepared by phosphoramidite chemistry, with 5′-amino-5-deoxythymidine was studied in the presence of a H₂O-soluble carbodiimide at (w_o) = 11 and 22 (w_o=[H₂O]/[CTAB]). The effect of w_o on the reaction rate was investigated. A solid-phase strategy was developed for the synthesis of 2′-deoxy-5′O-methyl-cytidyl-(3′-5′)-5′-amino-5′deoxythymidine. The nucleotide coupling yieldig the expected product occurred readily in reverse micelles. Nucleotide coupling is thus possible in reverse micelles, and this is discussed in connection with the micellar self-replication program.     

Tetrylenes chelated by bifunctional β‐diketiminate ligand: structure and possible applications

The synthesis and structure of heteroleptic tetrylenes containing bifunctional β‐diketiminate ligand are reported. Compounds were prepared via a protolytic reaction of free β‐diketimine {N‐[(2‐MeO)C₆H₅]}N═C(Me)CH═C(Me)N(H){N′‐[(2‐MeO)C₆H₅]} (L^COH) and {N‐[(2‐MeO)C₆H₅]}N?CHCH?CHN(H){N′‐[(2‐MeO)C₆H₅]} (L^HOH), respectively, with corresponding bis(amide) – M[N(SiMe₃)₂]₂ (M = Ge, Sn, Pb) – in equimolar ratio or via the salt elimination route from lithium precursors generated from L^HOH/L^COH species and slight excess of SnCl₂ or GeCl₂.dioxane complex. Only heteroleptic complexes were obtained by the mentioned methods. Products were characterized by multinuclear NMR spectroscopy techniques and structures of four of them have been determined by X‐ray diffraction methods. Complexes L^HOGeCl and L^COSnN(SiMe₃)₂ crystallize as monomers with the three‐coordinated metal centres by one chloro or amido ligand and one bidentate β‐diketiminato unit, in contrast to the structure of L^COSnCl, which reveals a dimeric character and compound L^COPbN(SiMe₃)₂, where the central atom of lead is five‐coordinated by methoxy groups of the ligand. Complex L^COSnN(SiMe₃)₂ was tested as a catalyst for polymerization of various epoxides_. Copyright © 2014 John Wiley & Sons, Ltd.     

Synthesis,structural characterization and in vitro cytotoxicity of diorganotin complexes with Schiff base ligands derived from 3‐hydroxy‐2‐naphthoylhydrazide

A series of diorganotin complexes with Schiff base ligands, (E)‐N′‐(5‐bromo‐2‐hydroxybenzylidene)‐3‐hydroxy‐2‐naphthohydrazide, H₂L1, and (E)‐N′‐(5‐chloro‐2‐hydroxybenzylidene)‐3‐hydroxy‐2‐naphthohydrazide, H₂L2, were synthesized and characterized by elemental analysis, IR, ¹H, ¹³C and ¹¹⁹Sn NMR spectroscopy. The molecular structures of the complexes, [(5‐bromo‐2‐oxidobenzylidene)‐3‐hydroxy‐2‐naphthohydrazidato]di(o‐chlorobenzyl)tin(IV) 6 and [(5‐chloro‐2‐oxidobenzylidene)‐3‐hydroxy‐2‐naphthohydrazidato]dibutyltin(IV) 9, were determined through single‐crystal X‐ray diffraction and revealed a distorted trigonal‐bipyramidal configuration. The in vitro cytotoxic activity of the Schiff bases and their diorganotin complexes was also evaluated against several human carcinoma cell lines, namely HT29 (human colon carcinoma cell line), SKOV‐3 (human ovarian cancer cell line), MCF7 (hormone‐dependent breast carcinoma cell line) and MRC5 (non‐cancer human fibroblast cell line). [(5‐Bromo‐2‐oxidobenzylidene)‐3‐hydroxy‐2‐naphthohydrazidato]dibutyltin(IV) 2 and [(5‐bromo‐2‐oxidobenzylidene)‐3‐hydroxy‐2‐naphthohydrazidato]dibenzyltin(IV) 5 were the most active diorganotin complexes of H₂L1 ligand. Among the diorganotin complexes of H₂L2 ligand, [(5‐chloro‐2‐oxidobenzylidene)‐3‐hydroxy‐2‐naphthohydrazidato]dicyclohexyltin(IV) 11 showed good cytotoxic activity against all the tested cell lines. As such, the above compounds can be considered agents with potential anticancer activities, and can therefore be investigated further in in vitro or in vivo anticancer studies. Copyright © 2012 John Wiley & Sons, Ltd.     

Heteronukleare Komplexverbindungen mit Metall—Metall-Bindungen. IX [1]. Amin-kupfer(I)-carbonylmetallate mit Cobalt,Eisen oder Mangan

Heteronuclear Coordination Compounds with Metal—Metal Bonds. IX. Amine Copper(I) Carbonyl Metalates with Cobalt, Iron, or Manganese Colourless crystals of the carbonyl copper complex [(NH₃)₃(CO)Cu][Co(CO)₄] ( 1 a ) are formed in the reaction of [Cu(NH₃)₄]Cl and Na[Co(CO)₄] (T < ? 8°C, p_CO = 1 bar); above ?5°C and under N₂-atmosphere 1 a converts to [(NH₃)₂CuCo(CO)₄] ( C ), which serves as a starting material for the synthesis of new copper cobaltates: the amines N-amino piperidine, N,N-dimethyl ethylenediamine (dmed) and N-benzyl N,N′-dimethyl ethylenediamine (bn-dmed) replace NH₃ to form [(C₅H₁₀N? NH₂)₃CuCo(CO)₄] ( 1 b ), [(dmed)CuCo(CO)₄] ( 1 c ), [(bn-dmed)CuCo(CO)₄] ( 1 d ) the Cu? Co-bond remaining intact. [(NH₃)₂CuFe(CO)₃NO] ( 2 a ) is isosteric with C ; it is synthesized from [Cu(NH₃)₄]Cl and Na[Fe(CO)₃NO] in aqueous solution; 2 a reacts with N,N,N′,N′-tetramethyl ethylenediamine (tmed) to form [(tmed)(NH₃)CuFe(CO)₃NO] ( 2b ). The [Mn(CO)₅]^? ion reacts with ammine copper ions to form the tetranuclear cluster [{(NH₃)CuMn(CO)₅}₂] ( 3 ). All new compounds have been investigated by X-ray structure analysis.     

Dimeric supramolecular motifs of two carboxylate–guanidinium compounds

The structures of N‐benzyl‐N′‐{6‐[(4‐carboxylatobenzyl)aminocarbonyl]‐2‐pyridylmethyl}guanidinium, C₂₃H₂₃N₅O₃, (I), and N‐[2‐(benzylaminocarbonyl)ethyl]‐N′‐{6‐[(4‐carboxylatobenzyl)aminocarbonyl]‐2‐pyridylmethyl}guanidinium monohydrate, C₂₆H₂₈N₆O₄·H₂O, (II), both form three‐dimensional supramolecular hydrogen‐bonded networks based on a dimeric primary synthon involving carboxylate–guanidinium linkages. The differences in the geometries and hydrogen‐bonding connectivities are driven by the additional methylpropionamide group and water of crystallization of (II).     

Synthesis and characterization of a cadmium(II)–organic supramolecular coordination compound based on the multifunctional 2‐amino‐5‐sulfobenzoic acid ligand

Much attention has been paid by chemists to the construction of supramolecular coordination compounds based on the multifunctional ligand 5‐sulfosalicylic acid (H₃SSA) due to the structural and biological interest of these compounds. However, no coordination compounds have been reported for the multifunctional amino‐substituted sulfobenzoate ligand 2‐amino‐5‐sulfobenzoic acid (H₂asba). We expected that H₂asba could be a suitable building block for the assembly of supramolecular networks due to its interesting structural characteristics. The reaction of cadmium(II) nitrate with H₂asba in the presence of the auxiliary flexible dipyridylamide ligand N,N′‐bis[(pyridin‐4‐yl)methyl]oxamide (4bpme) under ambient conditions formed a new mixed‐ligand coordination compound, namely bis(3‐amino‐4‐carboxybenzenesulfonato‐κO¹)diaquabis{N,N′‐bis[(pyridin‐4‐yl)methyl]oxamide‐κN}cadmium(II)–N,N′‐bis[(pyridin‐4‐yl)methyl]oxamide–water (1/1/4), [Cd(C₇H₆NO₅S)₂(C₁₄H₁₄N₄O₂)₂(H₂O)₂]·C₁₄H₁₄N₄O₂·4H₂O, (1), which was characterized by single‐crystal and powder X‐ray diffraction analysis (PXRD), FT–IR spectroscopy, thermogravimetric analysis (TG), and UV–Vis and photoluminescence spectroscopic analyses in the solid state. The central Cd^II atom in (1) occupies a special position on a centre of inversion and exhibits a slightly distorted octahedral geometry, being coordinated by two N atoms from two monodentate 4bpme ligands, four O atoms from two monodentate 4‐amino‐3‐carboxybenzenesulfonate (Hasba⁻) ligands and two coordinated water molecules. Interestingly, complex (1) further extends into a threefold polycatenated 0D→2D (0D is zero‐dimensional and 2D is two‐dimensional) interpenetrated supramolecular two‐dimensional (4,4) layer through intermolecular hydrogen bonding. The interlayer hydrogen bonding further links adjacent threefold polycatenated two‐dimensional layers into a three‐dimensional network. The optical properties of complex (1) indicate that it may be used as a potential indirect band gap semiconductor material. Complex (1) exhibits an irreversible dehydration–rehydration behaviour. The fluorescence properties have also been investigated in the solid state at room temperature.     

Influence of Confined Water on the Photophysics of Dissolved Solutes in Reverse Micelles

The photophysical parameters of two probes with largely different hydrophobic character, namely, coumarin 1 and coumarin 343, are investigated in sodium bis‐(2‐ethylhexyl)sulfosuccinate (AOT)/hexane/water reverse micelles at various water/AOT molar ratio w₀. Correlation of photophysical parameters such as fluorescence quantum yield, fluorescence lifetime, and emission maxima with w₀ indicate distinctly different trends below and above w₀≈7 for both probes. The variation of the average rotational correlation times obtained from fluorescence anisotropy decays for both probes in reverse micelles further corroborate the above observation. Similar studies were also performed in nonaqueous reverse micelles with acetonitrile as polar solvent. Similar to aqueous reverse micelles, breaks in the photophysical parameters with increasing acetonitrile/AOT molar ratios w′₀ were also observed in these cases, although at a much lower w′₀ value of 3. The present results indicate that around w₀≈7 for aqueous reverse micelles (and around w′₀≈3 for nonaqueous reverse micelles) a distinct change occurs in the probe microenvironment, which is rationalized on the basis of the relative populations of interfacial and core water. We propose that until the ionic head groups and counterions are fully solvated by polar solvents, that is, up to w₀≈7 (or w′₀≈3), the interfacial water population dominates. Above these molar ratios coalescence of excess water molecules with each other to form truncated H‐bonded water clusters leads to a sizable population of core water. This is further substantiated by changes in the IR absorption spectra for the O? D stretching mode of diluted D₂O in reverse micelles with varying w₀. Critical comparison of the present results with relevant literature reports provide clear support for the proposals made on water structure in reverse micelles. The role of relative size of the probe and the reverse micelles for differences in polar solvent to AOT ratios (w₀=7 and w′₀=3) in the observed breaks in the two types of reverse micelles is also discussed.     

2-Nitroguanidine derivatives: XI. Reactions of <Emphasis Type="Italic">N</Emphasis>′-nitrohydrazinecarboximidamide and 2-methylidene-<Emphasis Type="Italic">N</Emphasis>′-nitrohydrazinecarboximidamide with glyoxal

The reaction of glyoxal with N′-nitrohydrazinecarboximidamide (1-amino-2-nitroguanidine) in the presence of sodium hydroxide at a molar ratio of 1 : 1 : 1 gave N′-nitro-2-(2-oxoethylidene)hydrazinecarboximidamide as a mixture of syn and anti isomers, whereas at a reactant ratio of 1:2:2 N′-nitro-2-[(5-nitroamino-2H-1,2,4-triazol-3-yl)methyl]hydrazinecarboximidamide and 3-nitroamino-4,5-dihydro-1,2,4-triazin-5-ol were formed. N′-Nitro-2-(2-oxoethylidene)hydrazinecarboximidamide reacted with N′-nitrohydrazinecarboximidamide in boiling ethanol to give N′-nitro-2-[(5-nitroamino-2H-1,2,4-triazol-3-yl)methyl]hydrazinecarboximidamide, while in glacial acetic acid 2,2′-(ethane-1,2-diylidene)bis(N′-nitrohydrazinecarboximidamide) was obtained. The latter was also formed in the reaction of glyoxal with N′-nitrohydrazinecarboximidamide in acetic acid at room temperature. The reaction of 2-methylidene-N′-nitrohydrazinecarboximidamide with glyoxal led to the formation of 3-nitroimino-2,3,4-5-tetrahydro-1,2,4-triazine-5-carbaldehyde or 1-(methylideneamino)-2-(nitroimino)imidazolidine-4,5-diol, depending on the conditions.     

1-(2′-Deoxy-β-D-xylofuranosyl)cytosine: Base pairing of oligonucleotides with a configurationally altered sugar-phosphate backbone

Solid-phase synthesis of the oligo(2′-deoxynucleotides) 19 and 20 containing 2′-deoxy-β-D -xylocytidine ( 4 ) is described. For this purpose, 1-(2-deoxy-β-D -threo-pentofuranosyl)cytosine ( = 1-(2-deoxy-β-D -xylofuranosyl)-cytosine; 4 ) was protected at its 4-NH₂ group with a benzoyl (→ 5 ) or an isobutyryl (→ 8 ) residue, and a dimethoxytrityl group was introduced at 5′-OH (→ 7, 10 ; Scheme 2). Compounds 7 and 10 were converted into the 3′-phosphonates 11a,b . While 19 could be hybridized with 21 and 22 under formation of duplexes with a two-nucleotide overhang on both termini ( 19 · 21 : T_m 29°; 19 · 22 : T_m 22°), the decamer 20 bearing four xC_d residues could no longer be hybridized with one of the opposite strands. Moreover, the oligonucleotides d[(xC)₈? C] ( 13 ), d[(xC)₄? C] ( 14 ), d[C? (xC)₄? C] ( 15 ), and d[C? (xC)₃? C] ( 16 ) were synthesized. While 13 exhibits an almost inverted CD spectrum compared to d(C₉) ( 17 ), the other oligonucleotides show CD spectra typical for regular right-handed single helices. At pH 5, d[(xC)₈? C] forms a stable hemi-protonated duplex which exhibits a T_m of 60° (d[(CH⁺)₉] · d(C₉): T_m 36°). The thermodynamic parameters of duplex formation of ( 13H ⁺ · 13 ) and ( 17H ⁺ · 17 ) were calculated from their melting profiles and were found to be identical in ΔH but differ in ΔS ( 13H ⁺ · 13 : ΔS = ?287 cal/K mol; 17H ⁺ · 17 : ΔS = ?172 cal/K mol).     

Charakterisierung von Distorsionsisomeren der Anionen Pentacyano-oxo-molybdat(IV) sowie Tetracyano-oxo-aqua-molybdat(IV) im festen Zustand. Kristallstrukturen von [(C6H5)4P]3[MoO(CN)5] · 7 H2O(grün), [(C6H5)4As]2 [MoO(OH2)(CN)4] · 4 H2O (blau) und [(C6H5)4P]2[MoO(OH2)(CN)4] · 4 H2O (grün)

Characterization of Distortional Isomers of the Anions Pentacyano-oxo-molybdate(IV) and of Tetracyano-aqua-oxo-molybdate(IV) in the Solid State. Crystal Structures of [(C₆H₅)₄P]₃[MoO(CN)₅] · 7 H₂O (green), [(C₆H₅)₄As]₂[MoO(OH₂)(CN)₄] · 4 H₂O (blue), and [(C₆H₅)₄P]₂[MoO(OH₂) (CN)₄] · 4 H₂O (green) Preparation of a series of salts containing the new pentacyano-oxo-molybdate(IV) anion is described: Cs₂H[MoO(CN)₅] (blue), [(CH₃)₄N]₂H[MoO(CN)₅] · 2 H₂O (blue) and [Cr(en)₃] [MoO(CN)₅] · 4 H₂O (green). The green [(C₆H₅)₄P]₃[MoO(CN)₅] · 7 H₂O crystallizes triclinic in the space group P1 . The molybdenum(IV) center is in an pseudo-octahedral environment of a terminal oxo-group (d(Mo?O); 1.705(4) Å), a CN^? group in the trans-position (d(Mo? C): 2.373(6) Å), and four equatorial CN^? groups (averaged d(Mo? C): 2.178 (Å). The blue and green salts exhibit v(Mo?O) stretching frequencies at 948 cm^?1 and 920 cm^?1, respectively. Blue and green salts containing the [MoO(OH₂)(CN)₄]^2? anion and [(C₆H₅)₄P]⁺ or [(C₆H₅)₄As]⁺ cations have been prepared and characterized by single crystal crystallography. [(C₆H₅)₄P]₂[MoO(OH₂)(CN)₄] · 4 H₂O (green) and [(C₆H₅)₄As]₂[MoO(OH₂)(CN)₄] · 4 H₂O (blue) crystallize monoclinic in the space group C—P2₁/n. They are considered to be distortional isomers of the complex anion: the green species has a Mo?O bond distance of 1.72(2) Å whereas for the blue species d(Mo?O) = 1.60(2) Å is found; the corresponding v(Mo?O) frequencies are at 920 cm^?1 and 980 cm^?1.     

Long‐Lived Radical Cation Salts Obtained by Interaction of Monocyclic Arenes with Niobium and Tantalum Pentahalides at Room Temperature: EPR and DFT Studies

The 1:3 reactions of the alkoxy arenes 1,4‐(MeO)₂C₆H₄ and 1,4‐F₂‐2,5‐(MeO)₂C₆H₂ with TaF₅ in chloroform at 40–50 °C resulted in formation in about 35 % yield of the long‐lived radical cation salts [1,4‐(MeO)₂C₆H₄][Ta₂F₁₁] ( 2 a ) and [1,4‐F₂‐2,5‐(MeO)₂C₆H₂][Ta₂F₁₁] ( 2 b ), respectively. The non‐alkoxy‐substituted [arene][M₂X₁₁] [M=Ta, X=F: arene=C₆H₅Me ( 2 c ), 1,4‐C₆H₄Me₂ ( 2 d ), C₆H₅F ( 2 e ), C₆H₅NO₂ ( 2 f ); M=Nb, X=F: arene=C₆H₅Me ( 4 a ), 1,4‐C₆H₄Me₂ ( 4 b ), C₆H₅F ( 4 c ), C₆H₅NO₂ ( 4 d ); M=Ta, X=Cl: arene=1,4‐C₆H₄Me₂ ( 5 )] were obtained from the 3:1 reactions of MX₅ with the appropriate arene in chloroform at temperatures in the range 40–90 °C. Compounds 2 – 5 were detected by EPR spectroscopy (in CHCl₃) at room temperature, and their gas‐phase structures were optimized by DFT calculations. Formation of the M^IV species [MX₄(NCMe)₂] [M=Ta, X=F ( 3 a ); M=Nb, X=F ( 3 b ); M=Ta, X=Cl ( 3 c )] was ascertained by EPR spectroscopy on solutions obtained by treatment of the reaction mixtures with acetonitrile. Non‐selective reactions occurred upon combination of 1,4‐F₂‐2,5‐(MeO)₂C₆H₂ with AgNbF₆ (in CH₂Cl₂) and 1,4‐(MeO)₂C₆H₄ with SbF₅.     

Silica-supported cyclopentadienyl-rhodium(I), -cobalt(I), and -titanium(IV) complexes

The silylated cyclopentadiene derivative, (MeO)₃Si(CH₂)₃C₅H₅, synthesised from commerically-available (MeO)₃Si(CH₂)₃Cl, has been used to prepare the complexes [η⁵-(MeO)₃Si(CH₂)₃C₅H₄]Rh(CO)₂, [η⁵-(MeO)₃Si(CH₂)₃C₅H₄]Rh(COD) (COD = cyclo-octa-1,5-diene), and [η⁵-(MeO)₃Si(CH₂)₃C₅H₄]₂TiCl₂. The complex [η⁵-(MeO)₃Si(CH₂)₃C₅H₄]TiCl₃, prepared by reaction of NaC₅H₄(CH₂)₃Si(OMe)₃ with TiCl₄ (1/1 molar ratio) and also by reaction of [η⁵-(MeO)₃Si(CH₂)₃C₅H₄]Ti(OEt)₃ with CH₃COCl, proved to be very unstable. Attempts to synthesise the complex [η⁵-(MeO)₃Si(CH₂)₃C₅H₄](η⁵-C₅H₅)TiCl₂, either by reaction of [η⁵-(MeO)₃Si(CH₂)₃C₅H₄]TiCl₃ with NaC₅H₄ or reaction of (η⁵-C₅H₅)TiCl₃ with NaC₅H₄(CH₂)₃Si(OMe)₃, gave none of the expected product and only (η⁵-C₅H₅)₂TiCl₂ could be isolated from these reactions. The cyclo-octadiene rhodium complex supported on silica has been shown to be an efficient cyclotrimerization catalyst, and the silica-supported titanium complex (SIL-(CH₂)₃C₅H₄)₂TiCl₂ is, after reduction with butyllithium, an efficient and selective catalyst for the hydrogenation of alk-1-enes.     

1-(2′-Deoxy-β-D-xylofuranosyl)thymine Building Blocks for Solid-Phase Synthesis and Properties of Oligo(2′-Deoxyxylonucleotides)

1-(2′-Deoxy-β-D -threo-pentofuranosyl)thymine (= 1-(2′-deoxy-β-D -xylofuranosyl)thymine; xT_d; 2 ) was converted into its phosphonate 3b as well as its 2-cyanoethyl phosphoramidite 3c . Both compounds were used for solid-phase synthesis of d[(xT)₁₂-T] ( 5 ), representing the first DNA fragment build up from 3′–5′-linked 2′-deoxy--β-D -xylonucleosides. Moreover, xT_d was introduced into the innermost part of the self-complementary dodecamer d(G-T-A-G-A-A-xT-xT-C-T-A-C)₂ (9). The CD spectrum of d[(xT)₁₂–T] ( 5 ) exhibits reversed Cotton effects compared to d(T₁₂) ( 6 ; see Fig. 1), implying a left-handed single strand. With d(A₁₂) ( 7 ) it could be hybridized to form a propably Left-handed double strand d(A₁₂) · d[(xT)₁₂–T] ( 7 · 5 ) which was confirmed by melting experiments in combination with temperature-dependent CD spectroscopy. While 5 was hydrolyzed by snake-venom phosphodiesterase, it was resistant towards calf-spleen phosphodiesterase. The modified, self-complementary duplex 9 was hydrolyzed completely by snake-venom phosphodiesterase, at a twelvefold slower rate compared to unmodified 8 ; calf-spleen phosphodiesterase hydrolyzed 9 only partially.     

Very facile decarboxylation syntheses of polymethoxyphenylmercury compounds

The mercurials RHgO₂CR [R = 2,6-(MeO)₂C₆H₃, 2,3,4-(MeO)₃C₆H₂, or 2,4,6-(MeO)₃C₆H₂], RHgO₂CMe and R₂Hg [R = 2,4,6-(MeO)₃C₆H₂] have been obtained in good yield from decarboxylation reactions between mercuric acetate and the corresponding polymethoxybenzoic acids in aqueous methanol at room temperature.     

Catalytic effect of anionic micelles on alkaline hydrolysis of N-hydroxyphthalimide. Evidence for the probable occurrence of the reaction in between Gouy-Chapman and exterior boundary of Stern layers of the micelles

The nucleophilic second-order rate constant (k_OH) for the reaction of ōH with ionized N-hydroxyphthalimide (S^?) appears to follow a reaction mechanism similar to that for reactions of ōH with neutral phthalimide and its N-substituted derivatives. Kinetically indistinguishable terms, k′_w[H₂O][S^?] and k_ōH[ōH][SH] (SH represents nonionized N-hydroxyphthalimide), which constitute the pH-independent rate region of the pH-rate profile, are resolved qualitatively. It is shown that the term k_ōH[ōH][SH], rather than k′_w[H₂O][S^?], is important in these reactions. The rates of ōH-catalyzed cleavage of S^? were studied at 32° in the presence of micelles of sodium dodecyl sulphate (SDS). At a constant [ōH], the observed pseudo first-order rate constants (k_obs) increase linearly with [SDS]_T (total SDS concentration). These data are explained in terms of the pseudophase model of micellar effects on reactivity. The linear dependence of k_obs with [SDS]_T (within [SDS]_T range of 0.0–0.2 or 0.3 M) is attributed to the occurrence of the reaction between the exterior boundary of Stern layer and Gouy-Chapman layer.     

Two novel bis‐azomethines derived from quinoxaline‐2‐carbaldehyde

The Schiff base compounds N,N′‐bis[(E)‐quinoxalin‐2‐ylmethylidene]propane‐1,3‐diamine, C₂₁H₁₈N₆, (I), and N,N′‐bis[(E)‐quinoxalin‐2‐ylmethylidene]butane‐1,4‐diamine, C₂₂H₂₀N₆, (II), crystallize in the monoclinic crystal system. These molecules have crystallographically imposed symmetry. Compound (I) is located on a crystallographic twofold axis and (II) is located on an inversion centre. The molecular conformations of these crystal structures are stabilized by aromatic π–π stacking interactions.     

Structural studies and antileishmanial activity of 2‐acetylpyridine and 2‐benzoylpyridine nitroimidazole‐derived hydrazones

Three imidazole hydrazone compounds, namely 2‐(4‐nitro‐1H‐imidazol‐1‐yl)‐N′‐[1‐(pyridin‐2‐yl)ethylidene]acetohydrazide, C₁₂H₁₂N₆O₃, ( 1 ), 2‐(2‐nitro‐1H‐imidazol‐1‐yl)‐N′‐[1‐(pyridin‐2‐yl)ethylidene]acetohydrazide, C₁₂H₁₂N₆O₃, ( 2 ), and 2‐(2‐nitro‐1H‐imidazol‐1‐yl)‐N′‐[(phenyl)(pyridin‐2‐yl)methylidene]acetohydrazide, C₁₇H₁₄N₆O₃, ( 3 ), were obtained and fully characterized, including their crystal structure determinations. While all the compounds proved not to be cytotoxic to J774.A1 macrophage cells, ( 1 ) and ( 3 ) exhibited activity against Leishmania chagasi, whereas ( 2 ) was revealed to be inactive. Since both ( 1 ) and ( 3 ) exhibited antileishmanial effects, while ( 2 ) was devoid of activity, the presence of the acetyl or benzoyl groups was possibly not a determining factor in the observed antiprotozoal activity. In contrast, since ( 1 ) and ( 3 ) are 4‐nitroimidazole derivatives and ( 2 ) is a 2‐nitroimidazole‐derived compound, the presence of the 4‐nitro group probably favours antileishmanial activity over the 2‐nitro group. The results suggested that further investigations on compounds ( 1 ) and ( 3 ) as bioreducible antileishmanial prodrug candidates are called for.     

Acidic and anionic forms of 1,3‐cyclic dihydroxyacetone phosphate (cDHAP) dimethyl acetal

The six‐membered cyclic phosphate diester, 5,5‐dimethoxy‐2‐hydroxy‐1,3,2‐dioxaphosphorinan‐2‐one, C₅H₁₁O₆P or (MeO)₂cDHAP, which is the dimethyl acetal of cyclic dihydroxyacetone phosphate (cDHAP), has been obtained in the form of two new cyclohexylammonium (cha) salts, cyclohexylammonium 5,5‐dimethoxy‐2‐oxo‐1,3,2‐dioxaphosphorinan‐2‐olate monohydrate, (cha)[(MeO)₂cDHAP]·H₂O or C₆H₁₄N⁺·C₅H₁₀O₆P⁻·H₂O, and cyclohexylammonium 5,5‐dimethoxy‐2‐oxo‐1,3,2‐dioxaphosphorinan‐2‐olate, (cha)[(MeO)₂cDHAP] or C₆H₁₄N⁺·C₅H₁₀O₆P⁻, as well as in the form of the anhydrous free acid, (MeO)₂cDHAP. It is shown that protonation of the cyclic phosphate group influences the chair conformation of the P/O/C/C/C/O 1,3,2‐dioxaphosphorinane ring, and that differences in the ring conformation correlate with different deformations observed in the ionized and protonated phosphate groups. The ring is more evenly puckered in the anions, in contrast with the flattening observed in the structure of the free acid.     

Duplex Stability of 7-Deazapurine DNA: Oligonucleotides containing 7-bromo- or 7-iodo-7-deazaguanine

The oligonucleotide building blocks, the phosphonates 1a, b and the phosphoramidites 2a, b derived from 7-iodo- and 7-bromo-7-deaza-2′-deoxyguanosines 3a, b were prepared. They were employed in solid-phase oligonucleotide synthesis of the alternating octamers d(Br⁷c⁷G-C)₄ ( 8 ) and d(I⁷c⁷G-C)₄ ( 9 ) as well as the homo-oligonucleotides d[(Br⁷c⁷G)₅-G] ( 11 ) and d[(I⁷c⁷G)₅-G] ( 12 ). The melting profiles and CD spectra of oligonucleotide duplexes were measured. The T_m values as well as the thermodynamic data were determined and correlated to the major-groove modification of this DNA. The self-complementary octamers 8 and 9 form more stable duplexes compared to the parent oligomer d(G-C)₄. The heteroduplex of d[(I⁷c⁷G)₅-G] ( 12 ) with d(C₆) is slightly destabilized (ΔT_m = ?12°) over that of d[(c⁷G)₅-G] with d(C₆). However, the complex of 12 with poly(C) is more stable than that of d[(c⁷G₅-G)] with poly(C).