Programming supramolecular peptide materials by modulating the intermediate steps in the complex assembly pathway: Implications for biomedical applications

Self-assembling peptides form a prominent class of supramolecular materials with in general good biocompatibility. To afford better control over the material properties, tremendous progress has been made in studying the supramolecular organization of the peptide assemblies. This knowledge has helped us to understand the correlation between the molecular structure of the peptide building blocks and the properties of the supramolecular products. However, peptide self-assembly consists of a complex pathway rather than a spontaneous thermodynamic process. This implies that the outcome of the self-assembly is critically governed by the assembly pathway. Here, we are going to discuss how peptide self-assembly can be modulated at the intermediate steps in the self-assembly pathway. The focus will be to demonstrate this engineering approach on the example of zero-dimensional/one-dimensional nanostructure selectivity over the β-sheet assembly pathway. In addition, we provide examples of biomedical applications of such steered peptide assemblies in the field of drug delivery and tissue engineering.     

具有分子机器、分子开关功能的自组装超分子体系

本文介绍了具有分子梭或分子开关性质的新型轮烷和索烃超分子以及具有分子机器功能的其它类型化学和生物分子的国际研究最新动态。     

Self-assembly of diorganotin(IV) oxides (R = Me, nBu, Ph) and 2,5-pyridinedicarboxylic acid to polymeric and trinuclear macrocyclic hybrids with porous solid-state structures: influence of substituents and solvent on the supramolecular structure

2,5-Pyridinedicarboxylic acid has been reacted with three different diorganotin(IV) oxides (R = Me, nBu, Ph) to study the molecular and supramolecular structures of the resulting diorganotin(IV) 2,5-pyridinedicarboxylates. It has been found that coordinating solvent molecules can change the supramolecular structure completely. The molecular structures found are either polymeric (zigzag) or cyclotrimeric; the supramolecular arrangements include (i) systems having only loosely bound discrete molecules (van der Waals contacts), (ii) systems having a 2D or 3D hydrogen-bonded structure, and (iii) systems having a 3D polymeric coordination structure. Channels or cavities are formed in several cases. For a particular case, evidence has been provided that molecular aggregation to capsules through hydrogen bonding interactions is possible in solution.     

Supramolecular chemistry — Molecular information and the design of supramolecular materials

Molecular information expressed through molecular recognition events provides means for directing the spontaneous formation of supramolecular species from complementary components. It may allow the design and engineering of supramolecular materials, in particular of liquid crystalline and of polymeric nature. Thus, supramolecular mesophases have been obtained from molecular recognition-induced association of suitable subunits. The self-assembly of complementary ditopic components generates liquid crystalline “polymers” of supramolecular nature; it takes place by a progressive growth revealed by electron microscopy: from nuclei, to filaments, to tree-like species, to strings and fibers that present helicity induced by the chirality of the subunits. A rich variety of structures and properties may be expected to result from the blending of supramolecular chemistry with polymer chemistry and materials science.     

Perspectives in Supramolecular Chemistry—From Molecular Recognition towards Molecular Information Processing and Self-Organization

The selective binding of a substrate by a molecular receptor to form a supramolecular species involves molecular recognition which rests on the molecular information stored in the interacting species. The functions of supermolecules cover recognition, as well as catalysis and transport. In combination with polymolecular organization, they open ways towards molecular and supramolecular devices for information processing and signal generation. The development of such devices requires the design of molecular components performing a given function (e.g., photoactive, electroactive, ionoactive, thermoactive, or chemoactive) and suitable for assembly into an organized array. Light-conversion devices and charge-separation centers have been realized with photoactive cryptates formed by receptors containing photosensitive groups. Eleclroactive and ionoactive devices are required for carrying information via electronic and ionic signals. Redox-active polyolefinic chains, like the “caroviologens”, represent molecular wires for electron transfer through membranes. Push-pull polyolefins possess marked nonlinear optical properties. Tubular mesophases, formed by organized stacking of suitable macro-cyclic components, as well as “chundle”-type structures, based on bundles of chains grafted onto a macrocyclic support, represent approaches to ion channels. Lipophilic macrocyclic units form Langmuir-Blodgett films that may display molecular recognition at the air-water interface. Supramolecular chemistry has relied on more or less preorganized molecular receptors for effecting molecular recognition, catalysis, and transport processes. A step beyond preorganization consists in the design of systems undergoing self-organization, that is, systems capable of spontaneously generating a well-defined supramolecular architecture by self-assembling from their components under a given set of conditions. Several approaches to self-assembling systems have been pursued: the formation of helical metal complexes, the double-stranded helicates, which result from the spontaneous organization of two linear polybipyridine ligands into a double helix by binding of specific metal ions; the generation of mesophases and liquid crystalline polymers of supramolecular nature from complementary components, amounting to macroscopic expression of molecular recognition; the molecular-recognition-directed formation of ordered solid-state structures. Endowing photo-, electro-, and ionoactive components with recognition elements opens perspectives towards the design of programmed molecular and supramolecular systems capable of self-assembly into organized and functional supramolecular devices. Such systems may be able to perform highly selective operations of recognition, reaction, transfer, and structure generation for signal and information processing at the molecular and supramolecular levels.     

界面超分子聚合

超分子聚合物诞生于高分子化学与超分子化学的交叉融合,一般是指单体间通过非共价键作用连接形成的聚合物,并在溶液或体相中表现出类似聚合物的性质。目前超分子聚合物一般通过均相溶液聚合制备得到,但溶液中的超分子聚合是一个自发的组装过程,具有浓度依赖性,组装过程不易可控。为解决此问题,研究人员可以将超分子聚合从均相溶液转移到界面,在界面上可控地制备超分子聚合物。通过界面聚合制备超分子聚合物具有一些独特的优势,如可以制备得到分子量更高的超分子聚合物,易于制备一些缺陷少、面积大、有序的二维超分子聚合物等。本文基于在液-液、气-液和固-液三种界面上制备超分子聚合物的一些代表性工作,介绍了界面超分子聚合方法和应用,并展望其未来发展。     

Supramolecular Chemistry of Titanium Oxide Clusters

Titanium oxide clusters (TOCs) have been emerging as a new type of inorganic molecular entities of supramolecular chemistry. Herein, a perspective on the structures and functionalities of TOCs over the past three decades is given and the paramount roles of TOCs in serving supramolecular chemistry are demonstrated. Four types of supramolecular assemblies based on TOCs are reviewed, namely, TOC hosts for ion inclusion, mechanically interlocked molecular systems built from cyclic TOCs, reactivities of surface sites toward ligand exchange, and hierarchical structures of TOCs. The principles and advantages of TOCs toward each application are fully discussed, along with structural analyses. Following this path, more functional TOC-based supramolecular systems may be designed and synthesized in the future, which, in turn, will certainly enhance research into both supramolecular and coordination chemistry of titanium.     

Recent advances in biocompatible supramolecular assemblies for biomolecular detection and delivery

Inspired by sophisticated biological structures and their physiological processes,supramolecular chemistry has been developed for understanding and mimicking the behaviors of natural species. Through spontaneous self-assembly of functional building blocks,we are able to control the structures and regulate the functions of resulting supramolecular assemblies.Up to now,numerous functional supramolecular assemblies have been constructed and successfully employed as molecular devices, machines and biological diagnostic platforms.This review will focus on molecular structures of functional molecular building blocks and their assembled superstructures for biological detection and delivery.     

One‐Step Construction of the Shape Persistent,Chiral But Symmetrical Polyimine Macrocycles

A unique combination of structural flexibility, shape persistency and functionality, makes macrocycles and molecular cages as essential molecular entities that have displayed applications that go beyond chemistry. Among macrocycles, the selectively obtained symmetrical (poly)cyclic polyimines have shown great utility in the design of molecules varied in shape and properties. The reversible and thermodynamically controlled cycloimination reaction is governed by configurational and conformational constraints imposed on the intermediate products, ensures a sufficiently high level of preorganization. The high geometrical control over the macrocycle structure has profound effect on their assembly mode. In this Account, we were interested in showing how the structure of small building blocks affects the structure of macrocyclic product and further, how influenced the association mode of the given macromolecule. The latter is of primarily importance in supramolecular and in material chemistry.     

Dynamic Timing Control of Molecular Photoluminescent Systems

Dynamic control of molecular photoluminescence offers chemical solutions to designing functional emissive materials. Although stimuli-switchable molecular luminescent systems are well established, how to encode these dynamic emissive systems with a “timing” feature, that is, time-dependent luminescent properties, remains challenging. This Concept aims to summarize the design principles of dynamic timing molecular photoluminescent systems by discussing the state-of-the-art of this topic and the shaping of fabrication strategies at both the molecular and supramolecular levels. An outlook and perspectives are given to outline the future opportunities and challenges in the rational design and potential applications of these smart emissive systems.     

Computational approaches for understanding and predicting the self-assembled peptide hydrogels

Self-assembled peptide hydrogel is a promising biomaterial and has been widely applied in many fields. As a typical self-assembly material, peptide hydrogel exhibits properties different from traditional polymer hydrogel, and has unique features in molecular design, structural elements of hydrogel, and control strategies. With the desire to apply the principles of self-assembly to the design and prediction of peptide hydrogels, there has more and more emphasis on understanding the driving forces and microscopic behaviors involved in the self-assembly process. Computational methods have played an increasingly important role in recent research in helping to reveal the relationship between molecular chemical structure and self-assembly processes as well as assembled morphologies, thus determining the ability of supramolecular gelation. This review aims to summarize the application of computational tools to obtain a better fundamental understanding of the multi-scale structural details of self-assembled peptide hydrogels and to predict the gelation behavior of supramolecular nanofibers. It is expected that researchers will consider using these computational tools when investigating and designing novel peptide hydrogel materials.     

Tessellation of porphyrazines with porphyrins by design

The efficient self-assembly and functional characterization of arrays containing multiple types of chromophores will provide a basis for the design and applications of functional photonic materials that are unobtainable using only one type of molecule. The design, synthesis, and characterization of supramolecular systems bearing two different types of porphyrinic chromophores, porphyrins and porphyrazines, are reported. Because the porphyrins and porphyrazines bear different exocyclic ligands for self-assembly by metal ion coordination, these systems require new supramolecular synthetic strategies wherein reactants are added in a specific order. These arrays display unique photophysical properties derived from the component chromophores, the metal geometry, and the supramolecular nanoarchitecture.     

Supramolecular polymers fabricated by orthogonal self-assembly based on multiple hydrogen bonding and macrocyclic host–guest interactions

Supramolecular polymers constructed by orthogonal self-assembly based on multiple hydrogen bonding and macrocyclic host-guest interactions have received increasing attention due to their elegant structures,outstanding properties,and potential applications.Hydrogen bonding endows these supramolecular polymers with good adaptability and reversibility,while macrocyclic host-guest interactions give them good selectivity and versatile stimuli-responsiveness.Therefore,functional supramolecular polymers fabricated by these two highly specific,noninterfering interactions in an orthogonal way have shown wide applications in the fields of molecular machines,electronics,soft materials,etc.In this review,we discuss the recent advances of functional supramolecular polymers fabricated by orthogonal self-assembly based on multiple hydroge n bonding and host-guest interactions.In particular,we focus on crown ether-and pillar[n]arene-based supramolecular polymers due to their compatibility with multiple hydrogen bonds in organic solution.The fabrication strategies,interesting properties,and potential applications of these advanced supramolecular materials are mainly concerned.     

Supramolecular electronics; nanowires from self-assembled pi-conjugated systems

The conditions required for supramolecular electronics, e.g. nano-sized optoelectronic devices, will be illustrated on the basis of the programmed self-assembly of pi-conjugated systems into individual nanosized wires. Using the supramolecular design rules nanowires can be created from almost any polymeric and oligomeric pi-conjugated system. In the case of oligomers it is even possible to construct individual wires having a uniform diameter of one molecule thickness. The construction of wires on a substrate is possible by self-assembly in solution or during the deposition. The transfer of the supramolecular stacks from solution to a solid support is a very delicate process. A comprehensive knowledge of all intermolecular interactions gives rise to controlled transfer of pi-conjugated assemblies to specific surfaces. There are a large number of very appealing targets that should be reached before supramolecular electronics can serve as an attractive alternative in between single molecule electronics and bulk devices. Nevertheless, the combination of exciting scientific results and intriguing technological challenges creates an interesting future for supramolecular electronics.     

Noncovalent interactions in inorganic supramolecular chemistry based in heavy metals. Quantum chemistry point of view

Complexity is a concept that is being considered in chemistry as it has shown potential to reveal interesting phenomena. Thus, it is possible to study chemical phenomena in a new approach called systems chemistry. The systems chemistry has an organization and function, which are regulated by the interactions among its components. At the simplest level, noncovalent interactions between molecules can lead to the emergence of large structures. Consequently, it is possible to go from the molecular to the supramolecular systems chemistry, which aims to develop chemical systems highly complex through intra- and intermolecular forces. Proper use of the interactions previously mentioned allow a glimpse of supramolecular system chemistry in many tasks such as structural properties reflecting certain behaviors in the chemistry of materials, for example, electrical and optical, processes of molecular recognition and among others. In the last time, within this area, inorganic supramolecular systems chemistry has been developed. Those systems have a structural orientation which is defined by certain forces that predominate in the associations among molecules. It is possible to recognize these forces as hydrogen bonding, π-π stacking, halogen bonding, electrostatic, hydrophobic, charge transfer, metal coordination, and metallophilic interactions. The presence of these forces in supramolecular system yields certain properties such as light absorption and luminescence. The quantum theoretical modeling plays an important role in the designing of the supramolecular system. The goal is to apply supramolecular principles in order to understand the associated forces in many inorganic molecules that include heavy metals for instance gold, platinum, and mercury. Relevant systems will be studied in detail, considering functional aspects such as enhanced coordination of functionalized molecular self-assembly, electronic and optoelectronic properties.     

Strategies for the construction of supramolecular assemblies from poly-NHC ligand precursors

The field of supramolecular assemblies has developed rapidly in the last few decades, thanks in a large part to their diverse applications. These assemblies have been mostly based on Werner-type coordination motifs in which metal centres are coordinated by nitrogen or oxygen donors. Recently, N-heterocyclic carbene(NHC) ligands have been employed as carbon donors not only because of their appealing structures but also due to the extensive applications in catalysis, biomedicine and material science of the resulting assemblies. During the last decade, NHC-based supramolecular assemblies have witnessed rapid growth and extensive application in molecular recognition, luminescent materials and catalysis. For different topological systems, a diverse selection of poly-NHC precursors and synthetic strategies is crucial to precisely control the synthesis of supramolecular architectures. Several synthetic strategies have been developed to synthesise two-dimensional(2D) molecular metallacycles and three-dimensional(3D) metallacages from a wide range of poly-NHC precursors, including a straightforward one-pot strategy,supramolecular transmetalation, stepwise synthesis, an improved one-pot strategy involving self-sorting behaviour of 3D metallacages and a subtle variation strategy of poly-NHC ligand precursors. This review offers a summary of the synthetic strategies applied for the construction of different poly-NHC-based supramolecular assemblies, particularly emphasizes recent progress in the synthesis of large and complex supramolecular assemblies from poly-NHC precursors, and further attention is given to their application in postsynthetic modifications(PSMs), host-guest chemistry, luminescent properties and biomedical applications.     

Switching surface chemistry with supramolecular machines

Tethered supramolecular machines represent a new class of active self-assembled monolayers in which molecular configurations can be reversibly programmed using electrochemical stimuli. We are using these machines to address the chemistry of substrate surfaces for integrated microfluidic systems. Interactions between the tethered tetracationic cyclophane host cyclobis(paraquat-p-phenylene) and dissolved pi-electron-rich guest molecules, such as tetrathiafulvalene, have been reversibly switched by oxidative electrochemistry. The results demonstrate that surface-bound supramolecular machines can be programmed to adsorb or release appropriately designed solution species for manipulating surface chemistry.     

Supported catalysts incorporating BINOL units: towards heterogeneous asymmetric catalysis

Optically pure BINOL species were immobilized on two different types of support: organic (cross linked polystyrene) and inorganic (silica). The synthesis of the reticulated polystyrene gels was achieved via the radical crosslinking polymerization of a protected divinyl-(R)-BINOL derivative. The deprotection resulted in polystyrene networks incorporating free (R)-BINOL entities. Silica hybrid materials containing (R)-binaphthyl units were synthesized by sol–gel processing of a trialkoxysilylated (R)-BINOL-bis-carbamate precursor. Both materials were tested as chiral auxiliaries in enantioselective catalysis. The polystyrene-BINOL gels show similar catalytic properties compared to molecular (R)-BINOL and appears as a classical heterogenized catalyst system. Contrarily, the silica hybrid materials incorporating BINOL entities show significantly increased catalytic properties compared to the molecular catalyst in homogeneous solution. A supramolecular effect of the silica matrix on the stability and the selectivity of the catalyst system can be concluded. To cite this article: P. Hesemann, J.J.E. Moreau, C. R. Chimie 6 (2003).     

Rigidization,preorientation and electronic decoupling--the 'magic triangle' for the design of highly efficient fluorescent sensors and switches

One of the key interests in the recent development of fluorescent molecular sensors and switches is the realization of systems that show strong signal changes as a response to the chemical trigger. Aiming at rational probe design, this article compiles and compares different promising strategies to extract those supramolecular and photophysical features that allow the construction of molecular devices suitable for efficient signaling. The examples comprise fluorescence 'OFF'-'ON' as well as 'ON'-'OFF' operative systems and the mechanisms, properties, and limitations of the different design concepts are discussed.     

Azobenzene-based Photochromic Delivery Vehicles for Ions and Small Molecules

Molecular switches have been used as delivery vehicles for various molecular and ionic species. The ones that reversibly operate with light are arguably the best candidates for the purpose as they can be operated using light. The two states of these photoswitchable systems often possess remarkable differences in terms of their structural features and electronic properties. Photochromic systems with the appropriate embellishment of functionalities at suitable positions have thus been used as photoresponsive receptors. The use of light-driven alterations of the structural features has led to differential molecular recognition with these switchable host molecules. In this article, we discuss the use of such supramolecular systems as the delivery vehicles for ions and molecules that started with the pioneering work by Shinkai back in 1979. This review will explicitly cover the development from 2001 to 2022 with some past background and the future prospects of the field.