Utilizing a copper MOF as a reagent in a solvent mediated reaction to form a topologically distinct MOF

Employing a semi-rigid di-1,2,4-triazole ligand leads to the formation of new MOFs [Cu(4)(L)(4)(SO(4))(4)]·4[Cu(H(2)O)(6)(SO(4))] (3) and [Cu(6)(L)(3)(SO(4))(5)(OH)(2)(H(2)O)(6)]·13H(2)O (4). The frameworks can be synthesized independently, but a reaction occurs in water wherein kinetic product 3 is used as a reagent to synthesize the topologically distinct thermodynamic product 4.     

Discontinuum between a thiolate and a thiol ligand

The effect of H-bond donation to the thiolate ligand of (eta(5)-C(5)H(5))Fe(CO)(2)SR (1) to give H-bond adducts (1 small middle dotHX) and eventually protonation to give [(eta(5)-C(5)H(5))Fe(CO)(2)(HSR)](+) (1H(+)()) has been investigated experimentally and computationally. The electronic structures of 1(R = Me), several derivatives of 1(R = Me) small middle dotHX, and 1(R = Me)H(+)() have been investigated using DFT (density functional theory) computational methods. As previously suggested, these calculations indicate the HOMO of 1 is Fedpi-Sppi antibonding and largely sulfur in character. The calculations indicate the electronic structure of 1 is not altered markedly by H-bond donation to the S center, but protonation results in a reorganization of the electronic structure of 1H(+)() and a HOMO that is largely metal in character. The reduction of Fe-S distances upon protonation of 1(R = Ph) to give 1(R = Ph)H(+)() small middle dotBF(4)()(-)() (2.282(2) and 2.258(2) A, respectively), as determined by single-crystal X-ray crystallography, also indicates diminished Fedpi-Sppi antibonding. Using the carbonyl stretching frequencies as a gauge of the donor ability of the thiolate ligand, we conclude that H-bonding has a continuous effect on the donor properties of the thiolate ligand of 1 (i.e., is a function of the pK(a) of the H-bond donor). A discontinuous effect results when the pK(b) of 1 is reached and the complex is protonated. For our study of 1, the maximal effect of H-bonding is about 30% of protonation. Because the position of acid-base equilibrium depends on the relative basicities of the thiolate ligand and the conjugate base of the H-bond donor (and the relative heats of solvation of the acids and their conjugate bases), a true continuum of effects can be anticipated only for systems that are pK-matched in their given environments. Thus, when the conjugate base of the H-bond donor is a stronger base than the thiolate ligand (as in the present case), H-bond donation has a relatively small effect, but protonation triggers a large, discontinuous effect on the electronic structure of 1.     

Relaxation dynamics of a linear molecule in a random static medium: a scaling analysis

We present extensive molecular dynamics simulations of the motion of a single linear rigid molecule in a two-dimensional random array of fixed overlapping disklike obstacles. The diffusion constants for the center of mass translation, D(CM), and for rotation, D(R), are calculated for a wide range of the molecular length, L, and the density of obstacles, rho. The obtained results follow a master curve Drho(micro) approximately (L(2)rho)(-nu) with an exponent micro=-3/4 and 1/4 for D(R) and D(CM), respectively, that can be deduced from simple scaling and kinematic arguments. The nontrivial positive exponent nu shows an abrupt crossover at L(2)rho=zeta(1). For D(CM) we find a second crossover at L(2)rho=zeta(2). The values of zeta(1) and zeta(2) correspond to the average minor and major axis of the elliptic holes that characterize the random configuration of the obstacles. A violation of the Stokes-Einstein-Debye relation is observed for L(2)rho>zeta(1), in analogy with the phenomenon of enhanced translational diffusion observed in supercooled liquids close to the glass transition temperature.     

Hydroacridines XXV [1]. First Synthesis of (4aα,8aα,9aβ,10aβ)-Tetradecahydroacridine and New Syntheses of (4aα,8aα,9aα,10aβ)- and (4aα,8aβ,9aα,10aβ)-Tetradecahydroacridine

Summary. On heating in dry DMSO, in the presence of potassium t-butoxide, the N-nitrosamine of (4aα,8aβ,9aβ,10aα)-tetradecahydroacridine is completely converted into the N-nitrosamine of (4aα,8aα,9aα,10aβ)-tetradecahydroacridine. Under similar conditions, the N-nitrosamine of (4aα,8aα,9aβ,10aα)-tetradecahydroacridine yields a ternary equilibrium mixture containing itself (19%), and the N-nitrosamines of (4aα,8aβ,9aα,10aβ)-tetradecahydroacridine (46%) and the so far unknown (4aα,8aα,9aβ,10aβ)-tetradecahydroacridine (35%). The resulting N-nitrosamines can be smoothly denitrosated to the corresponding secondary amines.     

Hydrodynamic force on a microparticle approaching a wall in a nanoparticle dispersion: observation of a separation-dependent effective viscosity

Colloid probe atomic force microscopy was used to measure the hydrodynamic force exerted on a 30-μm-diameter silica particle being moved toward or away from a silica plate in aqueous dispersions of 22-nm-diameter silica nanoparticles (6 or 8 vol %). Upon comparing the measured force to predictions made using the well-known expression of Cox and Brenner (Cox, R. G.; Brenner, H. Chem. Eng. Sci.1967, 22, 1753-1777) assuming a constant viscosity equal to that of the bulk dispersion, the measured drag force was found to become significantly less than that predicted at smaller particle-plate separation distances (e.g., <500 nm). A recent theoretical paper by Bhattacharya and Blawzdziewicz (Bhattacharya, S.; Blawzdziewicz, J. J. Chem. Phys.2008, 128, 214704) predicted that in a solution of dispersed nanoparticles the effective viscosity characterizing the hydrodynamic force on the particle should vary from that of the solvent at contact to that of the bulk dispersion at large separations. By adjusting the viscosity in the Cox and Brenner expression to make the predicted hydrodynamic force match that measured (i.e., the effective viscosity), a curve showing these exact characteristics was obtained. The effective viscosity profile was not a function of particle speed, and changes in the effective viscosity extended to separation distances of as large as 2 μm (nearly 100 times the hard diameter of the nanoparticles). These results suggest that in the range of typical colloidal forces (on the order of 100 nm), the dynamics of particle motion in such systems are determined by the viscosity of the solvent and not that of the bulk dispersion.     

Reactivity of a silylsilylene bearing a functionalized diaminochlorosilyl substituent

The reactivity of the silylsilylene [{PhC(NtBu)(2)}SiSi(Cl){(NtBu)(2)C(H)Ph}] (2) towards diphenylacetylene, azobenzene, 2,6-diisopropylphenyl azide, sulfur, and selenium is described. The reaction of 2 with one equivalent of azobenzene in toluene afforded compound 3, which is the first example of a 1,2-diaza-3,4-disilacyclobutane containing a pentacoordinate silicon center. The formation of 3 can be explained by a [1+2] cycloaddition of the divalent Si center in 2 with PhN=NPh to form a diazasilacyclopropane intermediate, which then undergoes a 1,2-chlorine shift to release the ring strain to form 3. Similarly, the reaction of 2 with one equivalent of diphenylacetylene in toluene afforded the 1,2-disilacyclobutene 4, which contains a pentacoordinate silicon center. The reaction of 2 with 1.6 equivalents of 2,6-diisopropylphenylazide in toluene afforded the silaimine [LSi(=NAr)N(Ar)L'] (5, L=PhC(NtBu)(2) , L'=Si(Cl){(NtBu)(2)C(H)Ph}, Ar=2,6-iPr(2)C(6)H(3)). The formation of 5 can be explained by an oxidative addition of the divalent Si center in 2 with ArN(3) to afford a silaimine intermediate, which then reacts with another molecule of ArN(3) to give compound 5. The reaction of 2 with elemental sulfur in toluene afforded the chlorosilanethione [LSi(S)Cl] (6) and dithiodisiletane [{Ph(H)C(NtBu)(2) }Si(μ-S)](2) (7). Treatment of 2 with elemental selenium in THF afforded the di(silaneselone) [LSi(Se)Si(Se)L] (8). Evidently, the divalent Si center in 2 undergoes oxidative addition with chalcogens to afford a silylsilanechalcogenone intermediate, which then displaces ":Si{(NtBu)(2)C(H)Ph}" and "ClSi{(NtBu)(2) C(H)Ph}" to form 6 and 8, respectively. Moreover, compound 8 was synthesized by the reaction of [{PhC(NtBu)(2)}Si:](2) (10) with elemental selenium in THF. The results show that the reactions of 2 are initiated by oxidative addition of the divalent silicon center, and then the intermediate formed undergoes a rearrangement involving the diaminochlorosilyl substituent to form compounds 3-8. These products have been characterized by NMR spectroscopy and X-ray crystallography.     

Design of a peptide hairpin containing a central three-residue loop

The construction of a designed beta-hairpin structure, containing a central three-residue loop has been successfully achieved in the synthetic nonapeptide Boc-Leu-Phe-Val-(D)Pro-(L)Pro-(D)Ala-Leu-Phe-Val-OMe (2). The design is based on expanding the two-residue loop established in the peptide beta-hairpin Boc-Leu-Phe-Val-(D)Pro-(L)Pro-Leu-Phe-Val-OMe (1). Characterization of the registered beta-hairpins in peptides 1 and 2 is based on the observation of key nuclear Overhauser effects (NOEs) in CDCl(3) and CD(3)OH. Solvent titration and temperature dependence of NH chemical shifts establish the identity of NH groups involved in interstrand hydrogen bonding. In peptide 2, the antiparallel registry is maintained, with the formation of a (D)Pro-(L)Pro-(D)Ala loop, stabilized by a 5-->1 hydrogen bond between Val3 CO and Leu7 NH groups (C(13), alpha-turn) and a 3-->1 hydrogen bond between (D)Pro4 CO and (d)Ala6 NH groups (C(7), gamma-turn). NMR derived structures suggest that in peptide 2, (d)Ala(6) adopts an alpha(L) conformation. In peptide 1, the (D)Pro-(L)Pro segment adopts a type II' beta-turn. Replacement of (D)Ala (6) in peptide 2 by (L)Ala in peptide 3 yields a beta-hairpin conformation, with a central (D)Pro-(L)Pro two-residue loop. Strand slippage at the C-terminus results in altered registry of the antiparallel strands.     

Expansion of a pyridine ring by a nitrene

Pyrolysis of 2-(o-azidobenzyl)pyridine (3) gives 3H-1,2-diazepino[1,7-a]indole (5), in which the intermediate nitrene has expanded the pyridine ring.     

Thermal transformation of a layered multifunctional network into a metal-organic framework based on a polymeric organic linker

The preparation of layered [La(H(3)nmp)] as microcrystalline powders from optimized microwave-assisted synthesis or dynamic hydrothermal synthesis (i.e., with constant rotation of the autoclaves) from the reaction of nitrilotris(methylenephosphonic acid) (H(6)nmp) with LaCl(3)·7H(2)O is reported. Thermogravimetry in conjunction with thermodiffractometry showed that the material undergoes a microcrystal-to-microcrystal phase transformation above 300 °C, being transformed into either a three-dimensional or a two-dimensional network (two models are proposed based on dislocation of molecular units) formulated as [La(L)] (where L(3-) = [-(PO(3)CH(2))(2)(NH)(CH(2)PO(2))O(1/2)-](n)(3n-)). The two crystal structures were solved from ab initio methods based on powder X-ray diffraction data in conjunction with structural information derived from (13)C and (31)P solid-state NMR, electron microscopy (SEM and EDS mapping), FT-IR spectroscopy, thermodiffractometry, and photoluminescence studies. It is shown that upon heating the coordinated H(3)nmp(3-) anionic organic ligand undergoes a polymerization (condensation) reaction to form in situ a novel and unprecedented one-dimensional polymeric organic ligand. The lanthanum oxide layers act, thus, simultaneously as insulating and templating two-dimensional scaffolds. A rationalization of the various steps involved in these transformations is provided for the two models. Photoluminescent materials, isotypical with both the as-prepared ([(La(0.95)Eu(0.05))(H(3)nmp)] and [(La(0.95)Tb(0.05))(H(3)nmp)]) and the calcined ([(La(0.95)Eu(0.05))(L)]) compounds and containing stoichiometric amounts of optically active lanthanide centers, have been prepared and their photoluminescent properties studied in detail. The lifetimes of Eu(3+) vary between 2.04 ± 0.01 and 2.31 ± 0.01 ms (considering both ambient and low-temperature studies). [La(H(3)nmp)] is shown to be an effective heterogeneous catalyst in the ring opening of styrene oxide with methanol or ethanol, producing 2-methoxy-2-phenylethanol or 2-ethoxy-2-phenylethanol, respectively, in quantitative yields in the temperature range 40-70 °C. The material exhibits excellent regioselectivity to the β-alkoxy alcohol products even in the presence of water. Catalyst recycling and leaching tests performed for [La(H(3)nmp)] confirm the heterogeneous nature of the catalytic reaction. Catalytic activity may be attributed to structural defect sites. This assumption is somewhat supported by the much higher catalytic activity of [La(L)] in comparison to [La(H(3)nmp)].     

Formation of a Novel Cage Compound with a Pentacyclo

Abnormally long C-C single bonds are found in the polycyclic caged diol with a pentacyclo[6.3.0.1(4,11).0(2,6).0(5,10)]dodecane skeleton formed by photolysis (see scheme). This skeleton resembles the structure of diamantane, but instead of having six cyclohexane rings in a chair conformation it contains only two cyclohexane rings in a distorted chair conformation and four cyclopentane rings, which makes it more highly strained than diamantane.     

Assembly of a supramolecular capsule on a molecular printboard

A molecular capsule based on ionic interactions between two oppositely charged calix[4]arenes, 1 and 2, was assembled both in solution and on a surface. In solution, the formation of the equimolar assembly 1.2 was studied by (1)H NMR, ESI-MS, and isothermal titration calorimetry, giving an association constant (K(a)) of 7.5 x 10(5) M(-1). A beta-cyclodextrin self-assembled monolayer (beta-CD SAM) on gold was used as a molecular printboard to anchor the tetraguanidinium calix[4]arene (2). The binding of tetrasulfonate calix[4]arene 1 was monitored by surface plasmon resonance spectroscopy. Rinsing of the surface with a high ionic strength aqueous solution allows the removal of the tetrasulfonate calix[4]arene (1), while by rinsing with 2-propanol it is possible to achieve the complete desorption of the tetraguanidinium calix[4]arene (2) from the beta-CD SAM. The K(a) for the capsule formation on a surface is 3.5 x 10(6) M(-1), thus comparing well with the K(a) determined in solution.     

Cation-pi interactions of a thiocarbonyl group and a carbonyl group with a pyridinium nucleus

Attractive interactions between a thiocarbonyl group and a pyridinium nucleus, and between a carbonyl group and a pyridinium nucleus have been proven by (1)H and (13)C NMR studies, UV-vis spectral analyses, and X-ray crystallographic analyses of nicotinic amides 1 and 3, and pyridinium salts 2 and 4. Comparison of the Deltadelta values, which are the differences in the chemical shifts with reference compounds 5 or 6, showed that the absolute Deltadelta values of 2 and 4 are much larger than those of 1 and 3. In the UV-vis spectra, the n-->pi absorption of the C=S group of 2a exhibited a significant blue shift in CHCl(3). X-ray crystallographic analysis of 1-4 clearly showed that the C=S group of 2a and the C=O group of 4 are very close to the pyridinium moiety compared to the case of 1 and 3. In addition, the X-ray crystal packing structure of 2a showed the C=S group is sandwiched between two pyridinium rings. These experimental results strongly suggested the existence of attractive (C=S)...Py(+) and (C=O)...Py(+) interactions in solution and in crystal. The optimized geometries of 1 and 2 calculated at the HF/6-311G level are in good agreement with their X-ray geometries. MP2/6-311G calculations for the model systems of pyridinium salts 2 and 4 predicted that the electrostatic and induction energies are the major source of the attractive interactions. Since the larger contribution of electrostatic and induction interactions are characteristic features of cation-pi interactions, the (C=S)...Py(+) and (C=O)...Py(+) interactions would be classified as a cation-pi interaction.     

Electrophoretic motion of a nanorod along the axis of a nanopore under a salt gradient

Wood-based activated carbon was modified by deposition of silver using Tollens method. Adsorbents with various contents of silver were used to study NO(2) and NO (the product of NO(2) reduction by carbon) retention. The surface of the initial and exhausted materials was characterized using adsorption of nitrogen, XRD, SEM/EDX, FTIR and TA. The results indicated that with an increasing content of silver on the surface the capacities to retain NO(2) and NO increase until the plateau is reached. The performance depends on the dispersion of nanoparticles and their chemistry. Highly dispersed small silver metal particles promote formation of chelates with NO(2) and/or with NO. An excess of Tollens reagent results in formation of larger silver crystals and silver oxide nanoparticles. If sufficiently dispersed, they also enhance the retention of NO(2) via formation of nitrates deposited in the pore system. The surface of the carbon matrix is also active in NO(2) retention, providing the small pores and edges of graphene layers, where the reductions of NO(2)/oxidation of carbon take place.     

Radical cation of a trimethylenemethane with a nondegenerate ground state

Upon ionization by gamma-irradiation in frozen CFCl(3), or by X-irradiation in an Ar matrix, 2,2,3,3-tetramethylmethylenecyclopropane (MCP-Me4) readily undergoes ring opening to yield the radical cation of 1,1,2,2-tetramethyltrimethylenemethane (TMM-Me4). The hyperfine-coupling constants for TMM-Me4(.+) are (mT) -1.99 (2H), +0.53 (6H), and +0.19 (6H), and the singly occupied orbital closely resembles one of the two degenerate nonbonding pi-MOs (NBMOs) of trimethylenemethane (TMM). Due to the expected effect of the methyl substituents, this "symmetric" NBMO, psi(2+) (b(1)), is energetically favored relative to its "antisymmetric" counterpart, psi(2-) (a(2)), so that the ground state assumes a structure with (2)B(1) symmetry in the C(2v) point group. Calculations show that the ring opening in the primary radical cation MCP-Me4(.+) to yield TMM-Me4(.+) is spontaneous, whereas in the parent system (MCP(.+) --> TMM(.+) a low barrier does exist. In contrast to the previously investigated case of the radical cation of tetramethyleneethane, the "electromer" of TMM-Me4(.+), in which the unpaired electron occupies psi(2-), cannot be attained photochemically.     

Arylation of a carbanion derived from a pyridazine; a route to a functionalized aren

1,4-Dichlorobenzene(cyclopentadienyl)iron(II) hexafluorophosphate reacts with the carbanion derived from 3-ethoxy-6-methylpyridazine N-oxide to give a Yanovsky-type adduct.     

Electrophoresis of a biocolloid covered with a cation-absorptive membrane

The electrophoretic behavior of a biocolloid covered with a charged membrane is theoretically analyzed in the present study. Here, the influences of nonuniformly distributed fixed groups, absorption of cations by fixed original functional groups, variation in dielectric constant in the electrophoretic system, and ionic sizes are considered. The results of numerical simulation suggest that a larger absolute value of the electrophoric mobility of biocolloids could be generated by larger membrane electricity. The absolute value of the electrophoric mobility for the nonlinear distribution of the fixed groups is larger than that for the linear distribution of the fixed groups. The absolute value of the electrophoric mobility increases with (1) the concentration of total fixed groups, (2) the cation-absorption equilibrium constant, (3) the nonuniform feature index for functional-groups distribution, (4) the dielectric constants of the inner uncharged membrane zone for only mobile cationic charge and for both mobile cationic and anionic charge, and (5) the effective size of the cations. An increase in the absolute value of the electrophoric mobility can also be resulted from a decrease in the following parameters: (1) the friction coefficient of the biocolloidal membrane phase, (2) the membrane thickness, (3) the dielectric constant of space for all charge and of outer uncharged membrane zone, (4) the effective sizes of anions and fixed groups, and (5) the number of cations and the fixed original functional groups involved in the formation of a cation-functional group complex.     

Formation of a two-dimensionally well-ordered monolayer of a peptide oligomer by a simple spin-coating process

Oligo(N(6)-carbobenzyloxy-L-lysine) (OCBL) with n = 8 (n is the number-average degree of polymerization) was synthesized by the n-propylamine-catalyzed ring-opening polymerization of N(6)-carbobenzyloxy-L-lysine N-carboxylic anhydride, which was derived from N(6)-carbobenzyloxy-L-lysine. The formation of two-dimensionally well-ordered strip array monolayer films of the OBCL oligopeptide on graphite substrates was first succeeded by a conventional solution spin-coating process. The ordered strip array monolayer structure was characterized in detail by atomic force microscopy, and its assembly mechanism was examined.     

Thermal properties of a disc-like compound benzene-hexa-n-pentanoate: a precursor of a discotic mesogen

The heat capacity of a disk-like compound, benzene-hexa-n-pentanoate (BH5), a precursor of a discotic mesogen, has been measured by adiabatic calorimetry between 13 and 390 K. BH5 showed four different crystalline phases, but no liquid crystalline phase. Molar entropy and transition entropies were determined and compared with those of other homologues (BH6, BH7, and BH8). An odd-even effect with respect to the number of carbon atoms in the alkyl chain was observed for the cumulative entropies of the phase transitions occurring in the solid state. This effect is discussed by comparing with data for the n-alkanes. The molar entropies of the crystalline state, especially below 250 K, exhibited a peculiar 'pairing effect' between BH(2m- 1) and BH(2m), where m is an integer.     

Equilibrium conformational dynamics of a polymer in a solvent

Molecular dynamics simulations were used to study the conformational dynamics of a bead-spring model polymer in an explicit solvent under good solvent conditions. The dynamics of the polymer chain were investigated using an analysis of the time autocorrelation functions of the Rouse coordinates of the polymer chain. We have investigated the variation of the correlation functions with polymer chain length N, solvent density rho, and system size. The measured initial decay rates gamma(p) of the correlation functions were compared with the predictions from a theory of polymer dynamics which uses the Oseen tensor to describe hydrodynamic interactions between monomers. Over the range of chain lengths considered (N = 30-60 monomers), the predicted scaling of gamma(p) proportional to N(-3nu) was observed at high rho, where nu is the polymer scaling exponent. The predicted gamma(p) are generally higher than the measured values. This discrepancy increases with decreasing rho, as a result in the breakdown in the conditions required for the Oseen approximation. The agreement between theory and simulation at high rho improves considerably if the theoretical expression for gamma(p) is modified to avoid sum-to-integral approximations, and if the values of (R(p)2), which are used in the theory, are taken directly from the simulation rather than being calculated using approximate scaling relations. The observed finite-size scaling of gamma(p) is not quantitatively consistent with the theoretical predictions.     

PHOTOSENSITIZING PROPERTIES OF BACTERIOCHLOROPHYLLIN a and BACTERIOCHLORIN a, TWO DERIVATIVES OF BACTERIOCHLOROPHYLL a

Abstract The photosensitizing properties of two water soluble derivatives of bacteriochlorophyll a , bacteriochlorophyllin a and bacteriochlorin a (lacking the central Mg-ion) were investigated and compared to those of hematoporphyrin derivatives. At physiological pH the oxygen consumption rate of histidine, tryptophan, dithiothreitol and guanosine upon illumination was 3 to 4 times higher when bacteriochlorin a was used as photosensitizer than when hematoporphyrin derivatives were used. Especially bacteriochlorin a proved to be an effective sensitizer for the killing of L929 cells. Because bacteriochlorin a has an absorption maximum at 765 nm in phosphate buffered saline (allowing a light penetration in tissue about ten times larger than at 630 nm) and a high molar absorption coefficient (32 000 M cm⁻¹) it has promising possibilities for the application in photodynamic therapy.