Acid catalyzed hydrolysis of substituted anilinomethanesulfonates

Kinetic evidence from acid catalyzed hydrolysis is used to support an alternative mechanism for the formation and hydrolysis of anilinomethanesulfonates.     

Peptide hydrolysis catalyzed by matrix metalloproteinase 2: a computational study

The MMP-2 reaction mechanism is investigated by using different computational methodologies. First, quantum mechanical (QM) calculations are carried out on a cluster model of the active site bound to an Ace-Gly approximately Ile-Nme peptide. Along the QM reaction path, a Zn-bound water molecule attacks the Gly carbonyl group to give a tetrahedral intermediate. The breaking of the C-N bond is completed thanks to the Glu 404 residue that shuttles a proton from the water molecule to Ile-N atom. The gas-phase QM energy barrier is quite low ( approximately 14 kcal/mol), thus suggesting that the essential catalytic machinery is included in the cluster model. A similar reaction path occurs in the MMP-2 catalytic domain bound to an octapeptide substrate according to hybrid QM and molecular mechanical (QM/MM) geometry optimizations. However, the rupture of the Gly( P 1) approximately Ile( P 1') amide bond is destabilized in the static QM/MM calculations, owing to the positioning of the Ile( P 1') side chain inside the MMP-2 S 1' pocket and to the inability of simple energy miminization methodologies to properly relax complex systems. Molecular dynamics simulations show that these steric limitations are overcome easily through structural fluctuations. The energetic effect of structural fluctuations is taken into account by combining QM energies with average MM Poisson-Boltzmann free energies, resulting in a total free energy barrier of 14.8 kcal/mol in good agreement with experimental data. The rate-determining event in the MMP-2 mechanism corresponds to a H-bond rearrangement involving the Glu 404 residue and/or the Glu 404-COOH --> N-Ile( P 1') proton transfer. Overall, the present computational results and previous experimental data complement each other well in order to provide a detailed view of the MMPs catalytic mechanism.     

Kinetic study on acid‐base catalyzed hydrolysis of azimsulfuron,a sulfonylurea herbicide

Pseudo‐first‐order rate constants (k_obs) for hydrolysis of a sulfonylurea herbicide, azimsulfuron, AZIM®, {N‐[[(4,6‐dimethoxy‐2‐pyrimidinyl)amino]carbony]‐1‐methyl‐4‐(2‐methyl‐2H‐tetrazol‐5‐yl)‐1H‐pyrazole‐5‐sulfonamide} (AZS) follow an empirical relationship: k_obs =α₁ + α₂[⁻OH] + α₃[⁻OH]² within the [NaOH] range of 0.1–2.0 M at different temperatures ranging from 40 to 55°C. The contribution of α₃[⁻OH]² term is small compared with α₂[⁻OH] term and this turns out to be zero at 60°C. Pseudo‐first‐order rate constants (k_obs) for hydrolysis of AZS within the [H⁺] range from 2.5 × 10⁻⁶ to 1.4 M follow the relationship: k_obs = (α₁K _a + B₁[H⁺] + B₂[H⁺]²)/([H⁺] + K_a) where pK_a = 4.37 at 50°C. The value of B₁ is nearly 25 times larger than that of α₁. The rate of alkaline hydrolysis of AZIM is weakly sensitive to ionic strength. © 1999 John Wiley & Sons, Inc., Int J Chem Kinet 31: 253–260, 1999     

On the mechanism of hydrolysis of the triazolobenzodiazepine,triazolam. Spectroscopic study

The hydrolysis of 8-chloro-6-(2′-chlorophenyl)-1-methyl-4H[1,2,4]triazolo[4,3-a][1,4]benzodiazepine (Triazolam) at room temperature, involves a reversible mechanism. The intermediate is a protonated species and the final product is the ring-opened compound resulting from the reversible scission of the imine bond. The two compounds were determined simultaneously as a function of pH with pmr and cmr spectrometry. Spectral data of the benzophenone derivative II (ir, cmr, pmr) are reported.     

Enhanced hydrogen release by catalyzed hydrolysis of sodium borohydride-ammonia borane mixtures: a solution-state 11B NMR study

Hydrolysis of mixtures consisting of sodium borohydride NaBH(4) (SB) and ammonia borane NH(3)BH(3) (AB) was studied in the absence/presence of a Co catalyst. The kinetics of the H(2) evolutions was measured. The reactions were followed in situ by solution-state (11)B NMR and the hydrolysis by-products characterized by NMR, XRD and IR. It is demonstrated that the combination of the two compounds gives a synergetic effect. SB rapidly reduces the Co catalyst precursor and the NH(4)(+) ions from AB contribute in the dispersion of the in situ formed Co nanoparticles. As a result, the kinetics of H(2) evolution is greatly improved. For instance, a hydrogen generation rate of 29.6 L min(-1) g(-1)(Co) was found for a mixture consisting of 81 wt% NH(3)BH(3), 9 wt% NaBH(4) and 10 wt% CoCl(2). By (11)B NMR, it was showed that the reaction mechanisms are quite trivial. As soon as the Co catalyst forms in situ, SB, rather than AB, hydrolyzes until it is totally converted. Then, the overall hydrolysis continues with that of AB. Both reactions follow a bimolecular Langmuir-Hinshelwood mechanism; no reaction intermediates were observed during the process. In fact, SB and AB convert directly into B(OH)(4)(-), which comes in equilibrium with a polyborate compound identified as B(3)O(3)(OH)(4)(-). All of these results are discussed herein.     

Kinetic study of resin catalyzed hydrolysis of ethyl propionate in aqueous-organic systems

A kinetic study of solvent effect on sulfonated resin catalyzed hydrolysis of ethyl propionate has been made in water-acetone, water-dioxane, water-DMF and water-DMSO solvent mixtures of varying compositions, at different temperatures. Specific rate constants (k_r) were found to be a first order and decreased with increasing amount of organic co-solvent in the media. The variation in rates as well as the activation parameters have been interpreted on the basis of specific solvation ion and dielectric properties of the medium.

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Diphtheria toxin catalyzed hydrolysis of NAD(+): molecular dynamics study of enzyme-bound substrate, transition state, and inhibitor.

The mechanism of the diphtheria toxin-catalyzed hydrolysis of NAD(+) was investigated by quantum chemical calculations and molecular dynamics simulations. Several effects that could explain the 6000-fold rate acceleration (Delta Delta G(++) approximately 5 kcal/mol) by the enzyme were considered. First, the carboxamide arm of the enzyme-bound NAD(+) adopts a trans conformation while the most stable conformation is cis. The most stable conformation for the nicotinamide product has the amide carbonyl trans. The activation energy for the cleavage of the ribosidic bond is reduced by 2 kcal/mol due to the relaxation of this ground state conformational stress in the transition state. Second, molecular dynamics simulations to the nanosecond time range revealed that the carboxylate of Glu148 forms a hydrogen bond to the substrate's 2' hydroxyl group in E.S (approximately 17% of the time) and E.TS (approximately 57% of the time) complexes. This interaction is not seen in crystal structures. The ApUp inhibitor is held more tightly by the enzyme than the transition state and the substrate. Analysis of correlated motions reveals differences in the pattern of anticorrelated motions for protein backbone atoms when the transition state occupies the active site as compared to the E.NAD(+) complex.     

Acid catalyzed isomerization of bicyclic alkenes: a facile betweenanene synthesis

Isomerization of $\text{cis}$-bicyclo[10.8.0]eicos-1(12)-ene ($\text{1a}$) and $\text{cis}$-bicyclo[10.10.0]docos-1(12)-ene ($\text{1b}$) to [10.8]- and [10.10]betweenanene ($\text{2a}$ and $\text{2b}$) has been effected by sulfuric acid. In both cases, the betweenanene isomers were found to predominate at equilibrium (70/30 $\text{2a}$/$\text{1a}$ and 95/5> $\text{2b}$/$\text{1b}$).     

Hydrogen bonding, solvation, and hydrolysis of cisplatin: a theoretical study

Density functional calculations on a range of hydrogen bonded clusters of cisplatin are reported. A systematic search of 1:1 cisplatin:water complexes reveals only three stable minima, which contain a number of common, recurring interactions, such as an N-H...O-H...Cl bridging mode. Expanding these clusters by adding water molecules leads to a model of the first solvation shell of cisplatin, which contains the above motifs along with several strong water-water interactions. The strengths of such interactions are rationalized on the basis of electrostatic potentials, and quantified by use of Atoms in Molecules properties. This analysis also allows us to estimate cisplatin's position on Abraham's hydrogen bond acidity and basicity scales, indicating that cisplatin is a strong donor and acceptor of hydrogen bonds due to the dominance of hard, electrostatic interactions. The effects of this explicit solvation on the barrier to hydrolysis, and hence activation, of cisplatin are explored, indicating a slightly higher barrier than in the gas phase, leading to better agreement with experiment than either gas phase or continuum solvation calculations.     

聚醚桥连二异羟肟酸配合物催化羧酸酯水解的动力学研究

研究羧酸酯和磷酸酯的水解在环境和生物应用等方面具有越来越重要的意义。为实现对环境友好、高经济效益的生产过程,许多研究者致力于研发反应条件温和、催化效率高和高度专一性的催化剂。因而,仿酶研究倍受人们的关注,其中,水解金属酶是被研究得较为广泛的一类。我们曾报道过异羟肟酸过渡金属配合物仿生催化氧化性能和二氧亲合性能。本文我们将4种聚醚桥连二异羟肟酸过渡金属铜（Ⅱ）、锌（Ⅱ）、钴（Ⅱ）和锰（Ⅱ）配合物（见图1）作为仿水解酶模型,在底物浓度高于催化剂浓度10倍以上的条件下,研究了配合物在缓冲溶液中催化α-吡啶甲酸对硝基苯酯（PNPP）的水解反应的机理,并建立了相应的动力学数学模型;考查了配合物中心金属离子、溶液酸度和反应温度等对催化PNPP水解反应性能的影响。     

Reversible protonation of a vinyl selenide during its acid catalyzed hydrolysis

Partially reversible protonation is shown to occur in the course of the acid catalyzed hydrolysis of 2-methylseleno-2 tridecene $\text{1}$ together with a significant lowering of the kinetic solvent isotope effect (k_H2O+/k_D2O+ = 1.4).     

Kinetic study of specific base catalyzed hydrolysis of ethyl acrylate in water-ethanol binary system

Kinetic study of hydroxide anion catalyzed hydrolysis of ethyl acrylate has been carried in ethanol-water (10–50% v/v) binary systems at the temperature range 30 ± 0.1, 35 ± 0.1, 40 ± 0.1, and 45 ± 0.1°C. Calculated specific rate constant values decreases with increasing proportion of ethanol at all temperatures. The observed retardation of a base catalyzed hydrolysis reaction is explained on the basis of fact that the formation of polarized transition state is disfavored with increase in % of ethanol. The relation between the change in dielectric constant due to variation in binary mixtures and change in specific rate constant are explained on the basis of electrostatic and non electrostatic contributions of solvent mixtures. The variation of ΔG*, ΔH*, ΔS* with solvent composition and the specific effect of water on the reaction rate kinetics are also discussed.     

Micellar catalyzed hydrolysis of mono-2,3-dichloroaniline phosphate

The kinetics of micellar catalyzed hydrolysis of mono-2,3-dichloroaniline phosphate in the presence of different surfactants has been studied at 303?K. The rate of reaction has been found to be first order with respect to both [substrate] and [HCl]. The cationic micelles of cetylpyridinium chloride (CPC), anionic micelles of di-octyl sodium sulphosuccinate (AOT), and non-ionic micelles of polyoxyethylene sorbitan monooleate (Tween 80) enhanced the rate of reaction to a maximum value and after that the increase in concentration of surfactant decreased the reaction rate. The applicability of different kinetic models has been tested to explain the observed micellar effects. The various thermodynamic activation parameters (E_a, ΔH^≠, ΔS^≠, ΔG^≠) have been evaluated. The added salts viz. KCl, KNO₃, K₂SO₄ enhanced the rate of reaction in the presence of CPC, AOT, and Tween 80 micelles. The kinetic parameters were determined from the rate (surfactant) profile and a suitable mechanism consistent with the experimental finding has been proposed.     

Microcalorimetric study of the enzymatic hydrolysis of starch: An α-amylase catalyzed reaction

Microcalorimetric studies of enzyme activities have been made on the hydrolysis of starch catalyzed by α-amylase. The best conditions for the hydrolysis of starch in the presence of α-amylase have been pointed out and the α-amylase activity was determined by isothermal batch microcalorimetry. The heat changes involved during the hydrolytic reaction can be related to the starch concentrations in a linear way and the heights of the calorimetric curves can be directly related to the amylase activities. Calibration curves were obtained. The new method for starch assay and α-amylase activity determination is direct, simple, accurate and it needs no pretreatment of the sample or auxiliary reactions. The α-amylase catalytic activity has also been investigated by microcalorimetry in the presence of some metal ions.     

Acid hydrolysis of 2-alkoxyperfluoropropenes

Conclusions A new method for the synthesis of perfluoro-2-propenol from perfluoroisobutylene oxide was developed.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 7, pp. 1672–1673, July, 1978.