Analysis of ions in polar ice core samples by use of large injection volumes in ion chromatography

In the present study a non-suppressed ion chromatography system with conductivity detection was tested in terms of sampling effects, the effects on the ion separation efficiency and analysis detection limits to find optimum conditions for the determination of chloride, nitrate, sulfate, sodium, ammonium, potassium, calcium and magnesium ions in polar ice core samples.     

Comparison of ion chromatography and capillary electrophoresis for the determination of inorganic ions

The techniques of ion chromatography and capillary electrophoresis are compared as analytical methods for the determination of inorganic anions and cations. Comparison is made in the areas of stage of development, separation efficiency, separation selectivity, analytical performance parameters, method development procedures, applications, strenghts and weaknesses, and future directions. It is shown that the two techniques are complementary rather than competitive, especially with regard to their separation selectivities and the type of applications to which they are most suited.     

Simultaneous separation of inorganic anions and cations by capillary zone electrophoresis

A new capillary electrophoretic approach for simultaneous separation of fast anions and cations is demonstrated. Indirect UV detection at 214 nm in conjunction with electromigration sampling from both ends of the capillary was developed. Two electrolyte systems based on imidazole-nitrate and copper(II)-ethylenediamine-nitrate were investigated for the simultaneous separation of chloride, sulphate, hydrocarbonate, potassium, ammonium, calcium, sodium and magnesium ions. Experimental parameters that were evaluated included a nature of UV chromophore, pH of electrolyte, a nature of complexing agent. The method permits the excellent separation of three anions and five cations in only 4 min using electrolyte system containing 2.5 mmol l⁻¹ Cu(NO₃)₂, 5 mmol l⁻¹ ethylenediamine and 1 mmol l⁻¹ fumaric acid at pH 8.5 adjusted with tetraethylammonium hydroxide.     

A new QM/MM method oriented to the study of ionic liquids

The interest on room temperature ionic liquids has grown in the last decades because of their use as all‐purpose solvent and their low environmental impact. In the present work, a new theoretical procedure is developed to study pure ionic liquids within the framework of the quantum mechanics/molecular mechanics method. Each type of ion (cation or anion) is considered as an independent entity quantum mechanically described that follows a differentiated path in the liquid. The method permits, through an iterative procedure, the full coupling between the polarized charge distribution of the ions and the liquid structure around them. The procedure has been tested with 1‐ethyl‐3‐methylimidazolium tetrafluoroborate. It was found that, similar to non‐polar liquids and as a consequence of the low value of the reaction field, the cation and anion charge distributions are hardly polarized by the rest of molecules in the liquid. Their structure is characterized by an alternance between anion and cation shells as evidenced by the coincidence of the first maximum of the anion–anion and cation–cation radial distribution functions with the first minimum of the anion‐cation. Some degree of stacking between the cations is also found. © 2015 Wiley Periodicals, Inc.     

Force field evaluation for biomolecular simulation: free enthalpies of solvation of polar and apolar compounds in various solvents.

Recently, the GROMOS biomolecular force field parameter set 53A6--which has been parametrized to reproduce experimentally determined free enthalpies of hydration and solvation in cyclohexane of amino acid side-chain analogs--was presented. To investigate the transferability of the new parameter set, we calculated free enthalpies of solvation of a range of polar and apolar compounds in different solvents (methanol, dimethyl sulfoxide (DMSO), acetonitrile, and acetone) from molecular dynamics simulations using the GROMOS 53A6 force field. For methanol and DMSO, parameters were used that are available in the 53A6 parameter set. For acetonitrile, a recently developed model was taken and for acetone, two models available in literature were used. We found that trends in and values for the solvation free enthalpies are in satisfactory agreement with experiment, except for the solvation in acetone for which deviations from experiment can be explained in terms of the properties of the models used.     

Effect of Na+ and Ca2+ Ions on a Lipid Langmuir Monolayer: An Atomistic Description by Molecular Dynamics Simulations

Studying the effect of alkali and alkaline‐earth metal cations on Langmuir monolayers is relevant from biophysical and nanotechnological points of view. In this work, the effect of Na⁺ and Ca²⁺ on a model of an anionic Langmuir lipid monolayer of dimyristoylphosphatidate (DMPA^?) is studied by molecular dynamics simulations. The influence of the type of cation on lipid structure, lipid–lipid interactions, and lipid ordering is analyzed in terms of electrostatic interactions. It is found that for a lipid monolayer in its solid phase, the effect of the cations on the properties of the lipid monolayer can be neglected. The influence of the cations is enhanced for the lipid monolayer in its gas phase, where sodium ions show a high degree of dehydration compared with calcium ions. This loss of hydration shell is partly compensated by the formation of lipid–ion–lipid bridges. This difference is ascribed to the higher charge‐to‐radius ratio q/r for Ca²⁺, which makes ion dehydration less favorable compared to Na⁺. Owing to the different dehydration behavior of sodium and calcium ions, diminished lipid–lipid coordination, lipid–ion coordination, and lipid ordering are observed for Ca²⁺ compared to Na⁺. Furthermore, for both gas and solid phases of the lipid Langmuir monolayers, lipid conformation and ion dehydration across the lipid/water interface are studied.     

Micellar chromatography of inorganic compounds

Micellar chromatography has been used to separate various compounds and to determine the partition coefficients of the compounds between aqueous bulk solution and a micellar pseudophase. The application of this method to inorganic analyses is less common than its application to organic analyses, albeit the former application gives fundamental aspects of the micellar partition of simple ions and promises developments of novel separation. In this review, we focus our attention on the fundamental aspects of micellar chromatography mostly in inorganic analysis of simple ions.     

Solvation of uranyl(II), europium(III) and europium(II) cations in "basic" room-temperature ionic liquids: a theoretical study

We report a molecular dynamics study of the solvation of UO2(2+), Eu3+ and Eu2+ ions in two "basic" (Lewis acidity) room-temperature ionic liquids (IL) composed of the 1-ethyl-3-methylimidazolium cation (EMI+) and a mixture of AlCl4- and Cl- anions, in which the Cl-/AlCl4- ratio is about 1 and 3, respectively. The study reveals the importance of the [UO2Cl4]2- species, which spontaneously form during most simulations, and that the first solvation shell of europium is filled with Cl- and AlCl4- ions embedded in a cationic EMI+ shell. The stability of the [UO2Cl4]2- and [Eu(III)Cl6]3- complexes is supported by quantum mechanical calculations, according to which the uranyl and europium cations intrinsically prefer Cl- to the AlCl4- ion. In the gas phase, however, [Eu(III)Cl6]3- and [Eu(II)Cl6]4- complexes are predicted to be metastable and to lose two to three Cl- ions. This contrasts with the results of simulations of complexes in ILs, in which the "solvation" of the europium complexes increases with the number of coordinated chlorides, leading to an equilibrium between different chloro species. The behavior of the hydrated [Eu(OH2)8]3+ complex is considered in the basic liquids; the complex exchanges H2O molecules with Cl- ions to form mixed [EuCl3(OH2)4] and [EuCl4(OH2)3]- complexes. The results of the simulations allow us to better understand the microscopic nature and solvation of lanthanide and actinide complexes in "basic" ionic liquids.     

From dysfunction to bis-function: on the design and applications of functionalised ionic liquids

Some of the recent developments concerning the synthesis, properties and applications of functionalised ionic liquids are highlighted. Various strategies are presented, including functionalisation of the cation, anion or both cation and anion in the same ionic liquid, leading to what has been termed dual-functionalised ionic liquids. Particular attention is given to the application of functionalised ionic liquids as reaction media, to stabilise nanoparticles/modify surfaces and to generate porous materials.     

Exploring the dynamics of calix[4]pyrrole: effect of solvent and fluorine substitution

Molecular dynamics simulations show that calix[4]pyrrole (CP) and octafluorocalix[4]pyrrole (8F-CP) are extremely flexible molecules. CP mainly adopts the 1,3-alternate conformation in all the solvents, although the percentage of alternative conformations increases in polar solvents, especially those with good hydrogen-bonding acceptor properties. However, in the case of 8F-CP, the cone conformation is the most populated in some solvents. Transitions between conformers are common and fast, and both CP and 8F-CP can adopt the cone conformation needed for optimum interaction with anions more easily than would be predicted on the basis of previous gas-phase calculations. Furthermore, the present studies show that when a fluoride anion is specifically placed initially in close proximity to CP and 8F-CP in their respective 1,3-alternate conformations, an extremely fast change to the cone conformation is observed in both cases. The results suggest that preorganization does not represent a major impediment to anion-binding for either CP or 8F-CP, and that ion-induced conformational changes can follow different mechanisms depending on the solvent and the chemical substituents present on the calix[4]pyrrole beta-pyrrolic positions.     

Conformational and electronic properties of a microperoxidase in aqueous solution: a computational study.

A theoretical study of the conformational properties of a small heme peptide in aqueous solution is carried out by classical, long-timescale molecular dynamics simulations. The electronic properties of this species, that is, the relative energies of its excited electronic states and the redox potential, are reproduced and related to the conformational behavior using the perturbed matrix method and basic statistical mechanics. Our results show an interesting coupling between the conformational transitions and the electronic properties. These investigations, beyond the biophysically relevant results addressing the long-standing question of the actual role of the enzyme structure on the enzyme activity, are also of some methodological interest since they offer a further computational perspective for including the electronic degrees of freedom into the modeling of rather complex molecular systems.     

Identification of inorganic ions in post‐blast explosive residues using portable CE instrumentation and capacitively coupled contactless conductivity detection

Novel CE methods have been developed on portable instrumentation adapted to accommodate a capacitively coupled contactless conductivity detector for the separation and sensitive detection of inorganic anions and cations in post‐blast explosive residues from homemade inorganic explosive devices. The methods presented combine sensitivity and speed of analysis for the wide range of inorganic ions used in this study. Separate methods were employed for the separation of anions and cations. The anion separation method utilised a low conductivity 70 mM Tris/70 mM CHES aqueous electrolyte (pH 8.6) with a 90 cm capillary coated with hexadimethrine bromide to reverse the EOF. Fifteen anions could be baseline separated in 7 min with detection limits in the range 27–240 μg/L. A selection of ten anions deemed most important in this application could be separated in 45 s on a shorter capillary (30.6 cm) using the same electrolyte. The cation separation method was performed on a 73 cm length of fused‐silica capillary using an electrolyte system composed of 10 mM histidine and 50 mM acetic acid, at pH 4.2. The addition of the complexants, 1 mM hydroxyisobutyric acid and 0.7 mM 18‐crown‐6 ether, enhanced selectivity and allowed the separation of eleven inorganic cations in under 7 min with detection limits in the range 31–240 μg/L. The developed methods were successfully field tested on post‐blast residues obtained from the controlled detonation of homemade explosive devices. Results were verified using ion chromatographic analyses of the same samples.     

Computational screening of biomolecular adsorption and self‐assembly on nanoscale surfaces

The quantification of binding properties of ions, surfactants, biopolymers, and other macromolecules to nanometer‐scale surfaces is often difficult experimentally and a recurring challenge in molecular simulation. A simple and computationally efficient method is introduced to compute quantitatively the energy of adsorption of solute molecules on a given surface. Highly accurate summation of Coulomb energies as well as precise control of temperature and pressure is required to extract the small energy differences in complex environments characterized by a large total energy. The method involves the simulation of four systems, the surface‐solute–solvent system, the solute–solvent system, the solvent system, and the surface‐solvent system under consideration of equal molecular volumes of each component under NVT conditions using standard molecular dynamics or Monte Carlo algorithms. Particularly in chemically detailed systems including thousands of explicit solvent molecules and specific concentrations of ions and organic solutes, the method takes into account the effect of complex nonbond interactions and rotational isomeric states on the adsorption behavior on surfaces. As a numerical example, the adsorption of a dodecapeptide on the Au {111} and mica {001} surfaces is described in aqueous solution. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2010     

Effect of inorganic positive ions on the adsorption of surfactant Triton X-100 at quartz/solution interface

The electrode-separated piezoelectric sensor (ESPS), an improved setup of quartz crystal microbalance (QCM), has been employed to investigate the adsorption behavior of nonionic surfactant Triton X-100 at the hydrophilic quartz-solution interface in mineralized water medium in situ, which contained CaCl2 0.01 mol·L?1, MgCl2 0.01 mol·L?1, NaCl 0.35 mol·L?1. In a large scale of surfactant concentration, the effects of Ca2 , Mg2 and Na on the adsorption isotherm and kinetics are obviously different. In aque-ous solution containing NaCl only, adsorption of Triton X-100 on quartz-solution interface is promoted, both adsorption rate and adsorption amount increase. While in mineralized water medium, multivalent positive ions Ca2 and Mg2 are firmly adsorbed on quartz-solution interface, result in the increasing of adsorption rate and adsorption amount at low concentration of surfactant and the peculiar desorption of surfactant at high concentration of Triton X-100. The results got by solution depletion method are in good agreement with which obtained by ESPS. The "bridge" and "separate" effect of inorganic positive ions on the adsorption and desorption mechanism of Triton X-100 at the quartz- solution interface is discussed with molecular dynamics simulations (MD), flame atomic absorption spectrometry (FAAS) and atomic force microscopy (AFM) methods.