Synthesis and Characterization of γ‐Heteroaryl‐substituted Pentamethine Cyanine Dyes with Carboxy or Methoxycarbonyl Substituents at the Two Heterocyclic End Groups

Seven novel pentamethine cyanine dyes with 3,5‐dimethylpyridinium‐1‐yl, pyridinium‐1‐yl, and 1‐quinolinum‐1‐yl substituents in the γ position of the methine chain containing ester or carboxylic acid groups in the ring of the dyes were synthesized via a three‐step procedure. The visible spectral behavior of the pentamethine cyanine dyes was examined in DMSO. Elemental analysis, IR, ¹H‐NMR, ¹³C‐NMR, and mass spectral (MS) data confirmed the molecular structure of the newly synthesized compounds.     

Synthesis and Visible Spectral Behaviour of Some New N‐Bridgehead Heterocyclic Cyanine Dyes Incorporating Pyrazolo (4,5‐b) Indolizine (Benzoindolizine)

The new unsymmetrical N‐bridgehead, apo (zeromethine), mono‐methine, dimethine, meso substituted tetramethine and styryl cyanine dyes incorporating pyrazolo (4,5‐b) indolizine (benzoindolizine) nuclei were prepared. Structural confirmation was carried out by elemental analyses, IR, H‐NMR, mass spectra and ¹³C‐NMR with the aid of carbon DEPT spectral data. The visible absorption spectra for the newly synthesized cyanines were examined in 95% ethanol.     

Novel Cyanine Dyes: Synthesis,Characterization and Photosensitization‐Structure Correlation

Novel furo, thieno and pyrrolo[2,3‐b]pyrazole cyanine dyes were synthesized. The structure‐photosensitization properties correlation of the dyes were examined in 95% ethanol solution by absorption spectroscopy. The chemical structure of the starting biheterocyclic compounds and their derived cyanine dyes were confirmed by elemental analysis, IR and ¹H NMR spectroscopy.     

Synthesis of Asymmetric Monomethine Cyanine Dyes with Red‐Shifted Optical Properties

Six novel asymmetrical monomethine cyanine dyes were synthesized via the condensation reaction of 1‐butyl‐2‐(methylthio)benzo[c,d]indol‐1‐ium iodide and various 1,5‐substituted indolenine salts under basic conditions. The dyes were characterized using UV–vis spectroscopy, fluorescence, ¹H NMR, ¹³C NMR, and mass spectrometry; furthermore, the purity of these compounds was observed using LC/ELSD/MS.     

Cyanine‐Like Dyes with Large Bond‐Length Alternation

Herein, the synthesis and properties of alkyne‐bridged carbocations, which are analogous in structure to cyanine dyes, are reported. An alkene‐bridged dye, linked at the third position of the indole, was also synthesized as a reference compound. These new carbocations are stable under ambient conditions, allowing characterization by UV/Vis and NMR (¹H and ¹³C) spectroscopies. These techniques revealed a large degree of delocalization of the positive charge, similar to a previously reported porphyrin carbocation. The linear and nonlinear optical properties are compared with cyanine dyes and triarylmethyl cations, to investigate the effects of the bond‐length alternation and the overall molecular geometry. The value of Re(γ), the real part of the third‐order microscopic polarizability, of ?1.3×10^?33 esu for the alkyne‐linked cation is comparable to that of a cyanine dye of similar length. Nondegenerate two‐photon absorption spectra showed that the alkene‐bridged dye exhibited characteristics of cyanines, whereas the alkyne‐bridged dye is reminiscent of octupolar chromophores, such as the triarylmethyl carbocation brilliant green. Such attributes were confirmed and rationalized by quantum chemical calculations.     

Studies of 2‐Azaazulenium Derivatives: Unsymmetrical Trimethine Cyanine Dyes Bearing a 2‐Azaazulenium Moiety as One of the Terminal Groups

We report here the synthesis of a series of symmetrical and unsymmetrical trimethine cyanine dyes derived from 2‐azaazulene, combined spectral and quantum‐chemical investigations of their molecular geometry and electron structure, as well as the nature of the lowest electron transitions. Based on the analysis of both calculations and experimental data obtained from absorption and ¹³C NMR spectra, it was concluded that the 2‐azaazulene residue can be treated as a weakly basic terminal group; its donor properties are provided with the participation of the HOMO?1, in contrast to the typical Brooker’s terminal residues with their donor HOMOs. The new classification of the terminal groups of cyanine dyes, and hence the classification of types of unsymmetrical cyanines, is proposed. It is shown that the nature of the higher electron transitions (delocalized or local) in the cyanine dyes depends on their type. In the unsymmetrical trimethine cyanine of the mixed type, negative deviations are observed in their absorption spectra.     

Preparation,Antibacterial Activity and Absorption Spectra of Pyrazolo‐Oxadiazine Cyanine Dyes

A new pyrazolo[4,3‐e]‐1,3,4‐oxadiazine heterocyclic ring system was prepared and employed to synthesize cyanine dyes of different methine types, including monomethine (simple cyanine) and trimethine (carbocyanine). The antibacterial activity of all the newly synthesized compounds was investigated against some bacterial strains. The electronic absorption spectra of the dyes were studied in absolute ethanol. The structure of all the synthesized compounds was identified via elemental and spectroscopic analysis.     

Database of Absorption and Fluorescence Spectra of >300 Common Compounds for use in PhotochemCAD

The design of new molecules for photochemical studies typically requires knowledge of spectral features of pertinent chromophores beginning with the absorption spectrum (λ _abs) and accompanying molar absorption coefficient (ε , m ⁻¹ cm⁻¹) and often extending to the fluorescence spectrum (λ _em) and fluorescence quantum yield (Φ_f), where the fluorescence properties may be of direct relevance or useful as proxies to gain insight into the nature of the first excited singlet state. PhotochemCAD databases, developed over a period of 30 years, are described here. The previous databases for 150 compounds have been expanded to encompass 339 compounds for which absorption spectra (including ε values), fluorescence spectra (including Φ_f values) and references to the primary literature have been included where available (552 spectra altogether). The compounds exhibit spectra in the ultraviolet, visible and/or near‐infrared spectral regions. The compound classes and number of members include acridines (21), aromatic hydrocarbons (41), arylmethane dyes (11), azo dyes (18), biomolecules (18), chlorins/bacteriochlorins (16), coumarins (14), cyanine dyes (19), dipyrrins (7), heterocycles (26), miscellaneous dyes (13), oligophenylenes (13), oligopyrroles (6), perylenes (5), phthalocyanines (11), polycyclic aromatic hydrocarbons (16), polyenes/polyynes (10), porphyrins (34), quinones (24) and xanthenes (15). A database of 31 solar spectra also is included.     

Syntheses and electronic absorption spectra of some new penta- and di-methine cyanine dyes

The reaction of a ratio of 1 mole of 5-chloro-3-methyl-1-phenyl pyrazolo-4[2(4)]-dimethine cyanine ( 1a,b ) or (5-chloro-4-formyl-3-methyl-1-phenylpyrazole) 2 with 2 moles of an appropriate 2(4)-heterocyclic quaternary salt afforded the novel pentamethine cyanine dyes ( 3a–3e ). Other reactions of 2 with heterocyclic nitrogen bases, followed by condensation of the newly formed quaternary nitrogen salts ( 4a–4c ) with methoheterocyclic iodide salts provided the corresponding unsymmetrical dimethine cyanine dyes ( 5a–5g ). The new pentamethine and dimethine cyanine dyes were identified by elemental analyses and IR and ¹H-NMR spectral data. The visible absorption spectra of some selected dyes were investigated in pure and mixed solvents as well as in universal buffer solutions. The measure of the variation of absorbance with pH was utilized for the determination of the pK_a values for compounds 3b, 3d, 3e, 5e , and 5f , and these data are discussed. © 1997 John Wiley & Sons, Inc. Heteroatom Chem 8 : 259–266, 1997.     

Design and synthesis of novel thiourea metal complexes with controllable antibacterial properties

A new bidentate O,S donor thiourea ligand (L¹), namely N‐(2‐hydroxyethyl)‐N′‐2‐chlorobenzoylthiourea, and its oxazolidine derivative (L²) were synthesized. Derivative L² was used for the preparation of Ni(L²)₂ and Cu(L²)₂ complexes. The compounds were investigated using X‐ray crystallography and Fourier transform infrared, ¹H NMR and UV–visible spectroscopies. Single‐crystal X‐ray analysis showed strong hydrogen bonding interactions between carbonyl oxygen and N(10) ─ H in the L¹ ligand. In addition, the antibacterial activities of these compounds were evaluated against Gram‐positive and Gram‐negative bacteria, measured using the colony count method. The Cu(L²)₂ complex exhibited a significant antibacterial activity while the activity of the other compounds was much lower. Finally, the relationship between the structure and antibacterial properties of these compounds was investigated using highest occupied and lowest unoccupied molecular orbital energies calculated by density functional theory method based on the 6‐31G*/LANL2DZ basis set.     

Synthesis and Characterization of New γ-Substituted Pentamethine Cyanine Dyes

Three novel pentamethine cyanine dyes with 3,5-dimethylpyridinium-1-yl and 4-benzylpyridinium-1-yl substituents in γ position of the methine chain were synthesized via a three-step procedure. The visible spectral behavior of these pentamethine cyanine dyes was examined in DMSO. Elemental analysis, IR, ¹H-NMR, ¹³C-NMR, and Mass spectral data confirmed the molecular structure of the newly synthesized compounds.     

Synthesis of p-Nitro-stilbene Derivatives with Different Linking Bonds:An Attempt to Tune Spectroscopy of Dyes with Molecular Engineering

The synthesis, characterization and spectroscopy of a range of novel substituted p‐nitro‐stilbene derivatives with different bridging bonds were presented. The molecular structure characterization was carried out with ¹H NMR, ¹³C NMR and elemental analysis. The ultraviolet/visible spectroscopy and photoluminescence of the compounds were investigated in various solvents. The maximal absorption wavelength of the nitro‐stilbene derivatives with an ether bond exhibited approximate 30 to 40 nm bathochromic shift compared to that of nitro‐stilbene dyes with an ester bond. Furthermore, the nitro‐stilbene derivatives with an ether bond displayed obvious photoluminescence, while the nitro‐stilbene derivatives with an ester bond showed weak fluorescence emission. The detection of the cyclic voltammograms of the nitro‐stilbene derivatives showed that the nitro‐stilbene compounds with different linking bonds exhibited different redox proceses at various scan rates. The theroretical calculations of HOMO and LUMO energy of nitro‐stilbene derivatives showed that the energy gaps between HOMO and LUMO of 3 and 4 were lower than those of 1 and 2 . The electron density of the frontier orbitals of nitro‐stilbene derivatives was observed to be affacted by the linking bonds, which thus made it possible to tune the spectroscopy of these dyes with chemical strategy. The differential scanning calorimetry and thermogravimetry showed that the thermal stabilities of these dyes were not much affected by the linking bond. The results presented in this paper would be great interest in development of ideal nitro‐stilbene derivatives for special purposes.     

Spiro-Azoles Thiazolidinone in the Synthesis of Polymethine Cyanine Dyes

A series of some spiro azoles (pyrazolone, oxazolone, and/or imidazolone) inconjucton with heterocyclic thiazolidinone derivatives were prepared as starting materials in the synthesis of polymethine cyanine dyes. Reaction of spiro 2-formyl (oxime) azoles thiazolidinone derivatives with equi- and/or molar ratios of 2(4)-methyl substituted heterocyclic quaternary salts afforded the corresponding compound pentamethine, aza-mero cyanine, and azapentamethine cyanine dyes respectively. Elemental analyses, IR, 1 H-NMR, and mass-spectra identified the new spiro heterocyclic compounds and polymethine cyanine dyes. The visible absorption spectra of all new polymethine cyanine dyes were investigated.     

Novel Disubstituted Calix[4]arenes Containing Chromogenic Groups on the Lower Rim: Synthesis,Structural Identification,and Absorption Properties

5,11,17,23‐Tetra‐tert‐butyl‐25,26,27,28‐tetrahydroxycalix[4]arene and 25,26,27,28‐tetrahydroxycalix[4]arene were synthesized based on previous literature. Firstly, several azo dyes were synthesized, and then, these dyestuffs were chlorinated through reaction with thionyl chloride. Secondly, the azo compounds bonded with methylene chloride and reacted with 25,26,27,28‐tetrahydroxycalix[4]arene, and then, six novel disazocalix[4]arene derivatives 4 ( a – f ) were achieved. Their structures were characterized as Fourier transform infrared, ¹H‐NMR, and elemental analysis. In this study, we investigated the solvatochromic properties of the compounds and the acid–base effect on their ultraviolet–visible absorption by using six solvents.     

Synthesis and Evaluation of Antimicrobial Activity of Some New Hetaryl‐Azoles Derivatives Obtained from 2‐Aryl‐4‐methylthiazol‐5‐carbohydrazides and Isonicotinic Acid Hydrazide

A series of new 1,3,4‐oxadiazole/thiadiazole and 1,2,4‐triazole derivatives have been synthesized starting from 2‐aryl‐4‐methylthiazol‐5‐carbohydrazides and isonicotinic acid hydrazide. All the newly synthesized compounds were characterized by IR, ¹H NMR, ¹³C NMR, and mass spectrometry. The synthesized compounds were screened for their antibacterial and antifungal activity, assessed as growth inhibition diameter. Some of them showed good antibacterial activity against gram positive Staphylococcus aureus, while the antibacterial activity against Listeria monocytogenes, Escherichia coli, and Salmonella typhymurium and antifungal activity against Candida albicans was modest. None of the tested compounds showed inhibitory activity against gram positive bacteria Enterococcus faecalis and Bacillus cereus and against gram negative bacteria Pseudomonas aeruginosa.     

New heterobicationic hemicyanine dyes: Synthesis,spectroscopic properties,and photoinitiating ability

This article describes the synthesis, spectroscopic properties, and free‐radical photoinitiation ability of new heterobicationic hemicyanine dyes. A new synthetic strategy for the preparation of unsymmetrical cyanine dyes has been developed, based on 2‐methylbenzothiazole derivative quaternization by 3‐pyridinium‐1‐bromopropane bromide and subsequent condensation of the resulting product with p‐(N,N‐dimethylamino)benzaldehyde. The tested dyes possess in one molecule two quaternary nitrogen atoms; that is, they are heterobicationic in nature. Novel hemicyanine dyes have been tested as visible‐light photoinitiators of vinyl monomer polymerization. Heterobicationic hemicyanine dyes paired with n‐butyltriphenylborate anions are very efficient photoinitiators of the free‐radical polymerization of trimethylolpropane triacrylate when irradiated with the visible emission of an argon‐ion laser. The photoinitiating abilities of the novel photoredox pairs are compared with the photoinitiation properties of their monocationic equivalent {3‐methyl‐2‐[4‐(N,N‐dimethylamino)styryl]benzothiazolium n‐butyltriphenylborate} as well as a Rose Bengal derivative (a typical triplet‐state photoinitiator). © 2006 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 44: 6345–6359, 2006     

Synthesis of new hetarylazoindole dyes from some 2-aminothiazole derivatives

A new series of heterocyclic disperse dyes were prepared by diazotization of some 2-aminothiazole derivatives and subsequent coupling with indole compounds. The dyes were characterized by UV-Vis, FT-IR, ¹H NMR, and mass spectra (LC-MS). Solvent effects on their visible absorption spectra were estimated. The color of the dyes is discussed with respect to the substituent therein. The effects of acids and bases on the visible absorption maxima of the dyes are also reported. Replacement of methyl group in the 4-position of the thiazole ring by phenyl group leads to red shift of the absorption maximum due to π-electron-donating properties of the phenyl group, while weak electron-withdrawing chlorine or bromine atom in the para-position of the phenyl group in the 2-amino-4-phenylthiazole fragment induce a small blue shift relative to 2-amino-4-phenylthiazole derivatives. Introduction of an electron-withdrawing 4-nitrophenylsulfonyl group into the thiazole ring produces bathochromic shift of the absorption maximum in all solvents. Published in Russian in Zhurnal Organicheskoi Khimii, 2008, Vol. 44, No. 4, pp. 592–599. The text was submitted by the authors in English.     

Combination of Cyanine Behaviour and Giant Hyperpolarisability in Novel Merocyanine Dyes: Beyond the Bond Length Alternation (BLA) Paradigm

Merocyanine dyes that exhibit antithetic cyanine‐like behaviour and giant first‐order hyperpolarisability (β) values have been designed. These cyanine‐type dyes open up an intriguing route towards molecular‐based electro‐optic materials as well as new second‐harmonic generation dyes for imaging.     

Synthesis,Absorption Spectra Studies and Biological Activity of Some Novel Conjugated Dyes

Novel monomethine 2a‐f , dimethine 4a‐f and tetramethine 6a‐h cyanine dyes were prepared as conjugated dyes. Such dyes incorporating coumarin and/or quinoline derivatives 1a‐d . These dyes were synthesized to study their spectral behavior, solvatochromism and biological activity. These dyes are characterized by elemental analysis, IR, ¹H NMR and mass‐spectra.     

Radical Reactions Induced by Visible Light in Dichloromethane Solutions of Hünig's Base: Synthetic Applications and Mechanistic Observations

β‐(3‐Iodopropoxy)‐substituted α,β‐unsaturated lactams, lactones, and cycloalkenones (eight examples) underwent reductive radical reactions in a dichloromethane solution of N,N‐diisopropylethylamine (Hünig's base) upon irradiation with visible light (λ=419 nm). Apart from plain reduction reactions (hydro‐de‐iodination), a significant degree of cyclization was observed in three cases. In parallel to the conversion of the substrates, the formation of intensely colored by‐products was observed. Based on mass spectrometric evidence and upon comparison with known compounds, the by‐products were identified as cyanine dyes. Their formation supports the hypothesis that irradiation of dichloromethane solutions of Hünig's base leads to the formation of radicals, which in turn can either initiate a radical reaction or combine with cyanine precursors. It was shown by deuterium‐labelling experiments, that one equivalent of dichloromethane is incorporated into the cyanine dyes and that the reductive quenching of radical intermediates is at least partially due to hydrogen abstraction from the solvent. As a consequence, a reductive cyclization of the starting materials is favored in CD₂Cl₂ solutions as shown for two β‐(3‐iodopropoxy)‐substituted tetronates, which underwent in dichloromethane almost exclusive reduction, but gave predominantly the cyclization products in CD₂Cl₂.