Competition between π–π stacking and hydrogen bonding in (1:2) picrates of 1,5-diamino-3-oxapentane, 1,8-diamino-3,6-dioxaoctane and 1,5-diamino-3-azapentane—solid state studies

Crystallographic studies of (2:1) salts of picric acid with 1,5-diamino-3-oxapentane (1OPICR), 1,8-diamino-3,6-dioxaoctane (2OPICR) and 1,5-diamino-3-azapentane (1NPICR) showed significant conformational change of the picrate ion due to numerous electrostatic, H-bonding and π–π stacking interactions present in the crystal lattice. In particular, intermolecular N–HO H-bonds were found to cause significant twisting of the o-NO₂ groups from the plane of the benzene ring, whereas overlapping of the picrate ions due to electrostatic interactions and π–π stacking caused flattening of the molecule. Analysis of the geometry of 74 picrate ions found in the Cambridge Crystallographic Database, in their various crystallochemical environments, showed that competition between essentially weak but numerous intermolecular interactions of different types led to systematic changes in geometric parameters within the picrate ion. In particular, relations found between the C1–C2–N–O (C1–C6–N–O) torsion angle and the endocyclic C1–C2–C3 (C1–C6–C5) valence angle can be explained on the basis of competition between resonance effects of the o-NO₂ group and π–π stacking.     

Study on the Cation-π Interactions between Ammonium Ion and Aromatic π Systems

The nature and strength of the cation-π interactions between NH4^＋ and toluene, p-cresol, or Me-indole were studied in terms of the topological properties of molecular charge density and binding energy decomposition. The results display that the diversity in the distribution pattern of bond and cage critical points reflects the profound influence of the number and nature of substituent on the electron density of the aromatic rings. On the other hand, the energy decomposition shows that dispersion and repulsive exchange forces play an important role in the organic cation （NH4^＋）-π interaction, although the electrostatic and induction forces dominate the interaction. In addition, it is intriguing that there is an excellent correlation between the electrostatic energy and ellipticity at the bond critical point of the aromatic π systems, which would be helpful to further understand the electrostatic interaction in the cation-π complexes.     

Dual Mechanism for CO(A1Π)-CO(X1 ∑+) Rovibronic Energy Transfer: An OODR-MP1 Spectroscopic Study

The highly versatile OODR-MPI technique is used, mostly without resort to isotope tagging, to study the quantum state specific rovibronic energy transfer between molecules of the same species, specifically CO(A)-CO(XJ. Two types of rovibronic energy transfer mechanisms are found to be prevailing and are differentiated experimentally, i.e., the long range near resonant dipole-dipole interactions and the short range exciplex formation. The first type is characterized, at first unexpectedly, by its compliance to the selection rules of optical dipole transitions, ΔJ = 0, ±1 and parity + ? ?. Numerical computation procedures are presented for the calculation of rovibronic energy transfer cross-sections when the two types of mechanism are operating concurrently. The computed results and their variation with J are in good accord with the experiments.     

DFT calculations of hyperfine coupling constants of organic π radicals and comparison with empirical equations and experiment

Density functional theory calculations (UB3LYP/EPR‐III) for a series of radicals and radical ions were performed to check the internal consistency of the method and its implications to the theoretical concepts of electron paramagnetic resonance such as π–σ spin polarization, hyperconjugation and phenyl hyperconjugation. In the second part, experimental data for seven radicals (43 hyperfine coupling constants) are compared with calculations, yielding a correlation of r² = 0.97. Copyright © 2016 John Wiley & Sons, Ltd.     

Phenylcarbamoylated β‐CD: π‐Acidic and π‐basic chiral selectors for HPLC

Two types of chiral stationary phases for HPLC based on π‐acidic or π‐basic perphenylcarbamoylated β‐CDs were synthesized. The relative structural features of the two effective chiral selectors are discussed and compared in both normal‐phase and RP modes. In addition, the nature and concentration of alcoholic modifiers were varied for optimal separation in normal phase and the structural variation of the analytes was also examined. The results showed that hydrogen bonding, steric effect and π‐acidic–π‐basic interaction contributed greatly to enantioseparation. Upon comparison, some of the differences in the separation behavior of the two types of chiral stationary phases might be due to the π‐acidic or π‐basic phenylcarbamate groups.     

Comparative studies on group III σ‐hole and π‐hole interactions

The σ‐hole of M₂H₆ (M = Al, Ga, In) and π‐hole of MH₃ (M = Al, Ga, In) were discovered and analyzed, the bimolecular complexes M₂H₆···NH₃ and MH₃···N₂P₂F₄ (M = Al, Ga, In) were constructed to carry out comparative studies on the group III σ‐hole interactions and π‐hole interactions. The two types of interactions are all partial‐covalent interactions; the π‐hole interactions are stronger than σ‐hole interactions. The electrostatic energy is the largest contribution for forming the σ‐hole and π‐hole interaction, the polarization energy is also an important factor to form the M···N interaction. The electrostatic energy contributions to the interaction energy of the σ‐hole interactions are somewhat greater than those of the π‐hole interactions. However, the polarization contributions for the π‐hole interactions are somewhat greater than those for the σ‐hole interactions. © 2016 Wiley Periodicals, Inc.     

Local orbitals for the study of the π→π* excitation in polyenes

Localized orbitals have recently been employed in large ab initio calculations, but their use has generally been restricted to ground‐state problems. In this work, we analyze the molecular orbitals of the excited states, optimized with a recently proposed local procedure. This method produces local orbitals of the CAS–SCF type, which permits its application to the study of excited states. In particular, we focus on the π→π* triplet excited state in polyenes, calculated using a 2/2 CAS space which includes two electrons in one π and one π* orbitals. In small polyenes, these two singly occupied active orbitals are delocalized all along the molecule. The extent of the delocalization is analyzed by studying polyenes of increasing size. Different polyenes have been studied, going from C₁₄H₁₆ to the C₇₀H₇₂ polyene. The relation of the π→π* excitation with the cation and anion systems is also discussed. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2005     

Ab initio and AIM studies on typical π‐type and pseudo‐π‐type halogen bonds: Comparison with hydrogen bonds

Series of typical π‐type and pseudo‐π‐type halogen‐bonded complexes B ··· ClY and B ··· BrY and hydrogen‐bonded complex B ··· HY (B = C₂H₄, C₂H₂, and C₃H₆; Y = F, Cl, and Br) have been investigated using the MP2/aug‐cc‐pVDZ method. A striking parallelism was found in the geometries, vibrational frequencies, binding energies, and topological properties between B ··· XY and B ··· HY (X = Cl and Br). It has been found that the lengths of the weak bond d(X ··· π)/d(H ··· π), the frequencies of the weak bond ν(X ··· π)/ν(H ··· π), the frequency shifts Δν(X? Y)/Δν(H? Y), the electron densities at the bond critical point of the weak bonds ρ_c(X ··· π)/ρ_c(H ··· π), and the electron density changes Δρ_c(X? Y)/Δρ_c(H? Y) could be used as measures of the strengths of typical π‐type and pseudo‐π‐type halogen/hydrogen bonds. The typical π‐type and pseudo‐π‐type halogen bond and hydrogen bond are noncovalent interactions. For the same Y, the halogen bond strengths are in the order B ··· ClY < B ··· BrY. For the same X, the halogen bond strength decreases according to the sequence F > Cl > Br that is in agreement with the hydrogen bond strengths B ··· HF > B ··· HCl > B ··· HBr. All of these typical π‐type and pseudo‐π‐type hydrogen‐bonded and halogen‐bonded complexes have the “conflict‐type” structure. Contour maps of the Laplacian of π electron density indicate that the formation of B ··· XY halogen‐bonded complex and B ··· HY hydrogen‐bonded complex is very similar. Charge transfer is observed from B to XY/HY and both the dipolar polarization and the volume of the halogen atom or hydrogen atom decrease on B ··· XY/B ··· HY complex formation. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Computational studies on the reactions of 3‐butenyl and 3‐butenylperoxy radicals

The reactions of 3‐butenyl (^?CH₂CH₂CH?CH₂) radicals—unimolecular decomposition, isomerization, as well as reaction with O₂—and the subsequent unimolecular rearrangement reactions of the 3‐butenylperoxy radicals have been investigated and are compared to the analogous reactions of butyl (^?CH₂CH₂CH₂CH₃) and butylperoxy radicals using transition‐state theory based on the quantum chemical calculations at the CBS‐QB3 level. For alkyl‐analogue processes, the reactions of 3‐butenyl and 3‐butenylperoxy radicals can be well characterized by the decreased and increased bond dissociation energies at the allylic and vinylic sites, respectively. The intramolecular addition reactions of the radical center atoms to the double bonds were found to be important non‐alkyl‐analogue reactions of 3‐butenyl and 3‐butenylperoxy radicals. As a consequence, the thermal decomposition of 3‐butenyl radicals was found to be slower than that of butyl radicals by one order of magnitude at temperature near 1000 K. Intramolecular addition reactions are suggested to be the predominant unimolecular rearrangement processes of 3‐butenylperoxy radicals over the entire temperature range investigated (500–1200 K). The intramolecular addition reactions of the alkenyl peroxy radicals, which have not been included in combustion kinetic models, and their implications for the autoignition of alkenes are discussed. © 2010 Wiley Periodicals, Inc. Int J Chem Kinet 42: 273–288, 2010     

Synthesis of γγγ-trifluorocarbonyl compounds

γγγ-Trifluorocarbonyl compounds are easily obtained in a good yield by introduction of the 1,1,1-trifluoroethyl moiety (CF₃-CH₂-) on the -methylene group of a ketone.     

Preparation of σ- and π-Benzyl Type Derivatives of Molybdenum

The reaction of -LiM₀(CO)₂Cp with α-chloromethylnaphthalene gives a yellow, crystalline σ-benzyl type derivative of molybdenum (1). Irridation of (1) in n-hexane gives a red π-benzyl type derivative (2). Both complexes (1) and (2) are stable in air.     

Quinoidal/Aromatic Transformations in π‐Conjugated Oligomers: Vibrational Raman studies on the Limits of Rupture for π‐Bonds

The vibrational Raman spectra of several series of aromatic and quinoidal compounds have been analyzed considering the downshifts and upshifts of the frequencies of the relevant Raman bands as a function of the number of repeating units. Oligothiophenes, oligophenylene‐vinylenes, and oligoperylenes (oligophenyls) derivatives are studied in a common context. These shifts are taken as spectroscopic fingerprints of the changes in π‐conjugation. For a given family, aromatic and quinoidal oligomers have been studied together, and according to their Raman frequency shifts located in the two‐well BLA–energy curve of their ground electronic state as a function of the bond‐length‐alternation pattern (BLA). The connection among BLA values, π‐conjugation, and Raman frequencies is taken here as the basis of the study. These Raman shifts/BLA changes have been related to important electronic properties of these one‐dimensional linear π‐electron delocalized systems such as quinoidal (polyene) and aromatic characters.     

Novel π-Conjugated Poly（Schiff base） Containing Thiazole and Tetrathiatetrahyd ropentalene Moieties

A new kind of π-conjugated heterocyclic poly(Schiff base) was firstly prepared by the condensation reaction between tetrathiatetrahydropentalene-type diketone and bithiazole-diamine in good yields. The polymers were characterized by VPO, FTIR and ^1H NMR spectroscopy. A large bathochromic shift was observed in UV-Vis spectra for these polymers due to the π-π* transition in the conjugated main chain. Brief examination indicated that the nitrogen-and sulfur-containing polymers exhibited an excellent chelating tendency to metal ions and the corresponding polymeric complexes would be expected to have potential in applications.     

The electronic quenching rates of NO(AΣ, v=0–2)

The electronic quenching rates of NO(A²Σ⁺, v^′=0–2) are measured for the gases He, Ar, Xe, N₂, O₂, CO₂, N₂O, and SF₆. The variations of the fluorescence intensity were measured for the (0,0), (1,0), and (2,0) bands of the γ band system when the quencher gases were added. The quenching rates were determined by using the Stern–Volmer plots with the known radiative lifetimes of the excited states. The electronic quenching rate constants are fast for the group of gases of O₂, CO₂, N₂O, and SF₆, whose quenching rate constants are in the order of 10⁻¹⁰ cm³/s. The quenching rate constants are slow for the group of gases including He, Ar, Xe, and N₂ whose rate constants are in the order of 10⁻¹⁴ cm³/s. For the slow group, the quenching rate constants increase rapidly for v^′=2 compared with those of v^′=0 and 1.

The charge transfer model and collision complex model are used to understand the quenching mechanism. For the fast group which mainly consists of gases with positive electron affinities, the charge transfer model adequately describes the mechanism. For the slow quenching group, a theoretical background is provided by consider the coupling of initial and final states in the complex potential surfaces.     

5-雄烯-3β, 7α, 17β-三醇和5-雄烯-3β, 7β, 17β-三醇的合成

以5-雄烯二醇为原料,用微生物转化的方法合成了两个重要的神经甾体5-雄烯-3β, 7α, 17β-三醇和5-雄烯-3β, 7β, 17β-三醇。所用菌种总枝毛霉为我们自己筛选,并首次应用于5-雄烯-3β, 7α, 17β-三醇和5-雄烯-3β, 7β, 17β-三醇的合成中。     

Theoretical study of the π→π* excited states of linear polyenes: The energy gap between 11Bu+ and 21Ag− states and their character

Multireference perturbation theory with complete active space self-consistent field (CASSCF) reference functions is applied to the study of the valence π→π* excited states of 1,3-butadiene, 1,3,5-hexatriene, 1,3,5,7-octatetraene, and 1,3,5,7,9-decapentaene. Our focus was put on determining the nature of the two lowest-lying singlet excited states, 1¹B_u⁺ and 2¹A_g⁻, and their ordering. The 1¹B_u⁺ state is a singly excited state with an ionic nature originating from the HOMO→LUMO one-electron transition while the covalent 2¹A_g⁻ state is the doubly excited state which comes mainly from the (HOMO)²→(LUMO)² transition. The active-space and basis-set effects are taken into account to estimate the excitation energies of larger polyenes. For butadiene, the 1¹B_u⁺ state is calculated to be slightly lower by 0.1 eV than the doubly excited 2¹A_g⁻ state at the ground-state equilibrium geometry. For hexatriene, our calculations predict the two states to be virtually degenerate. Octatetraene is the first polyene for which we predict that the 2¹A_g⁻ state is the lowest excited singlet state at the ground-state geometry. The present theory also indicates that the 2¹A_g⁻ state lies clearly below the 1¹B_u⁺ state in decapentaene with the energy gap of 0.4 eV. The 0–0 transition and the emission energies are also calculated using the planar C_2h relaxed excited-state geometries. The covalent 2¹A_g⁻ state is much more sensitive to the geometry variation than is the ionic 1¹B_u⁺ state, which places the 2¹A_g⁻ state significantly below the 1¹B_u⁺ state at the relaxed geometry. © 1998 John Wiley & Sons, Inc. Int J Quant Chem 66 : 157–175, 1998     

The tropolone–isobutylamine complex: a hydrogen‐bonded troponoid without dominant π–π interactions

Tropolone long has served as a model system for unraveling the ubiquitous phenomena of proton transfer and hydrogen bonding. This molecule, which juxtaposes ketonic, hydroxylic, and aromatic functionalities in a framework of minimal complexity, also has provided a versatile platform for investigating the synergism among competing intermolecular forces, including those generated by hydrogen bonding and aryl coupling. Small members of the troponoid family typically produce crystals that are stabilized strongly by pervasive π–π, C—H…π, or ion–π interactions. The organic salt (TrOH·iBA) formed by a facile proton‐transfer reaction between tropolone (TrOH) and isobutylamine (iBA), namely isobutylammonium 7‐oxocyclohepta‐1,3,5‐trien‐1‐olate, C₄H₁₂N⁺·C₇H₅O₂⁻, has been investigated by X‐ray crystallography, with complementary quantum‐chemical and statistical‐database analyses serving to elucidate the nature of attendant intermolecular interactions and their synergistic effects upon lattice‐packing phenomena. The crystal structure deduced from low‐temperature diffraction measurements displays extensive hydrogen‐bonding networks, yet shows little evidence of the aryl forces (viz. π–π, C—H…π, and ion–π interactions) that typically dominate this class of compounds. Density functional calculations performed with and without the imposition of periodic boundary conditions (the latter entailing isolated subunits) documented the specificity and directionality of noncovalent interactions occurring between the proton‐donating and proton‐accepting sites of TrOH and iBA, as well as the absence of aromatic coupling mediated by the seven‐membered ring of TrOH. A statistical comparison of the structural parameters extracted for key hydrogen‐bond linkages to those reported for 44 previously known crystals that support similar binding motifs revealed TrOH·iBA to possess the shortest donor–acceptor distances of any troponoid‐based complex, combined with unambiguous signatures of enhanced proton‐delocalization processes that putatively stabilize the corresponding crystalline lattice and facilitate its surprisingly rapid formation under ambient conditions.