噻吩加聚物(C4H4S) n(n=1～8)的密度泛函理论研究

Thiophene polymers（C4H4S）n（ n = 1 ～ 8）have been studied on B3LYP / 6-31G theory level. Vibrational frequencies,total energy（ET）,zero point energy（ZPE）,capacity（C0P）,entropy（S0 ）and energy gap（ΔE）was calculated based on the optimized equilibrium structures. By means of frequency analysis,the equilibrium structures were confirmed. The relationships between ET,ZPE,C0P,S0,ΔE and n were studied. The formation enthalpy of thiophene polymers was calculated with the total energies. The polymerized process and relative stability of the title compounds was determined according to the data of the formation enthalpy. The calculated results indicated that the thiophene molecular which has a planar structure exists in the stable chain polymers and the chain structures（C4H4S）n（ n > 1）present different stabilities when n is an even or odd number. ZPE,C0P,and S0 show a linear increasing trend with n. The energy gaps ΔE show a direct proportion to n too,which indicated that the conduct property increases with n. The results also illustrated that the stepsize polymerized process is the primary way in the polymerized reactions.     

Substituent effects on the thermochemistry of thiophenes. a theoretical (G3(MP2)//B3LYP and G3) study

Very good linear correlations between experimental and calculated enthalpies of formation in the gas phase (G3(MP2)//B3LYP and G3) for 48 thiophene derivatives have been obtained. These correlations permit a correction of the calculated enthalpies of formation in order to estimate more reliable "experimental" values for the enthalpies of formation of substituted thiophenes, check the reliability of experimental measurements, and also predict the enthalpies of formation of new thiophenes that are not available in the literature. Moreover, the difference between the enthalpies of formation of isomeric thiophenes with the same substituent in positions 2 and 3 of the ring has been analyzed. Likewise, a comparison of the substituent effect in the thiophene and benzene rings has been established.     

Estimation of the catalytic activity of onium chlorides and bromides in the alkaline hydrolysis of amino acids esters

Relations were investigated between the structure of a series of onium salts, rates of alkaline hydrolysis catalyzed by the salts of 4-nitrophenyl N-benzyloxycarbonylglycinate in a two-phase liquid-liquid system, and the value of the standard exchange enthalpy of anions in ion pairs with the catalyst cation calculated by the semiempiric PM3 method. The catalytic activity of ammonium, phosphonium, pyridinium, imidazolium, and benzimidazolium salts in a wide range of cation structures varies in parallel with the enthalpy of formation of the active form of the catalyst by the exchange of the anion with a hydroxide ion.     

Thermochemistry of 2,5-thiophenedicarboxylic acid

The enthalpies of combustion and sublimation of 2,5-thiophenedicarboxylic acid [CASRN 4282-31-9] were measured by rotary-bomb combustion calorimetry and the method of transference in a saturated stream of nitrogen, and the gas-phase enthalpy of formation was determined, Delta(f)H(o)(m)(g) = -(632.6 +/- 2.2) kJ x mol(-1). Standard ab initio molecular orbital calculations at the G2(MP2) and G3(MP2) levels were performed, and a theoretical study on the molecular and electronic structure of the compound has been carried out. The three most stable conformers have been explicitly taken into account. The calculated enthalpy of formation averaged using three different isodesmic reactions, -631.1 kJ x mol(-1), is in very good agreement with the experimental value. A comparison of the substituent effect of the carboxylic groups in benzene and thiophene ring has been made. The relative stability obtained for the substitution of two H atoms by COOH in position 2,5- for thiophene and 1,4- for benzene involve the same energetic effects, DeltaDelta(f)H(o)(m)= -747.6 +/- 2.4 and -748.2 +/- 2.7 kJ x mol(-1), respectively.     

1,3-二甲氧甲酰-4,6-二氰基噻吩并[3,4-c]噻吩的合成和密度泛函理论研究

设计采用新颖的Pummerer-氰化路线和用亚硫酰氯作S-转移试剂的路线合成了第一例全部连吸电子基的噻吩并[3,4-c]噻吩. 用¹H NMR, ¹³C NMR, FTIR, 元素分析和X射线衍射分析进行了表征. 用B3LYP/6-31G^*及B3LYP/6- 311＋＋G^**方法全优化计算了1,3-二甲氧甲酰-4,6-二氰基吩并[3,4-c]噻吩分子, 得到几何构型、总能量、标准熵、标准焓和标准自由能, 计算构型与X射线衍射测定结果非常吻合. 并用电荷分布讨论了有关非经典噻吩并[3,4-c]噻吩体系的稳定性, 计算结果能很好地解释有关实验现象.     

Synthesis, characterization, and optical properties of 4H-pyran-4-ylidene donor-based chromophores: the relevance of the location of a thiophene ring in the spacer

A series of new 4H-pyran-4-ylidene donor-based chromophores with a thiophene ring in the spacer has been synthesized. The linear and nonlinear optical (NLO) properties of these compounds have been determined and compared with the results of computational calculations. The position of the thiophene ring proved essential to optimize the figure of merit μβ, with the best results obtained when the heterocyclic system was closer to the donor moiety.     

Cyclophanes: Simulation of the formation enthalpy by quantum-chemical methods

Comparison of experimental values of gas-phase formation enthalpy of cyclophanes with the results of semiempirical quantum-chemical simulation has revealed good linear correlation with the PM-3 data. Using the derived equation, formation enthalpies of 30 cyclophanes have been predicted.     

Dynamic characteristic of amitriptyline in water by ultrasonic relaxation method and molecular orbital calculation

Ultrasonic absorption coefficients in the frequency range of 0.8-220 MHz have been measured in aqueous solution of amitriptyline (3-(10,11-dihydro-5H-dibenzo[a,d]cycloheptene-5-ylidene)-N,N-dimethyl-1-propanamine) in the concentration range from 0.20 to 0.60 mol dm(-3) at 25 °C. A single relaxational phenomenon has been observed, and the relaxation frequency is independent of the concentration. It has been also observed that the amplitude of the relaxational absorption increases linearly with the analytical concentration. From these ultrasonic relaxation data, it has been concluded that the relaxation is associated with a unimolecular reaction due to a conformational change of the solute molecule, such as a structural change due to a rotational motion of a group in the solute molecule. Molecular orbital semiempirical methods using AM1 (Austin model 1) and PM3 (modified neglect of diatomic overlap parametric method 3) have been applied to obtain the standard enthalpy of formation for amitriptyline molecule at various dihedral angles around one of the bonds in alkylamine side chain. The results have shown the two clear minimum standard enthalpies of formation for amitriptyline. From the difference of the two values, the standard enthalpy change between the two stable conformers has been calculated be 2.9 kJ mol(-1). On a rough assumption that the standard enthalpy change reflects the standard free energy change, the equilibrium constant for the rotational isomers has been estimated to be 0.31. Combining this value with the experimental ultrasonic relaxation frequency, the backward and forward rate constants have been evaluated. The standard enthalpy change of the reaction has been also estimated from the concentration dependence of the maximum absorption per wavelength, and it has been close to that calculated by the semiempirical methods. The ultrasonic absorption measurements have been also carried out in amitriptyline solution in the presence of β-cyclodextrin. However, the ultrasonic relaxation has not been found in the above frequency range. The result has been discussed in relation to the host-guest complex formation between β-cyclodextrin and amitriptyline.     

Elongation and contraction of molecular springs. Synthesis, structures, and properties of bridged [7]thiaheterohelicenes

A series of bridged [7]thiaheterohelicenes 3a-c and 4 with a variety of helical pitches have been prepared from racemic and optical pure 2,13-bis(hydroxymethyl)dithieno[3,2-e:3',2'-e']benzo[1,2-b:4,3-b']bis[1]benzothiophene (1) in order to investigate the helical structures in solution. Recrystallizations of (PM)-3a, (PM)-3b, (PM)-3c, and (P)-4 from hexane-dichloromethane gave crystals suitable for X-ray crystallography, while recrystallization of (PM)-4 with benzene gave an inclusion complex with a stoichiometry of (PM-4)(4).(C(6)H(6)). X-ray analyses of (PM)-3a-c, (PM-4)(4).(C(6)H(6)), and (P)-4 indicate that the dihedral angles between terminal thiophene rings of the helical framework significantly vary from 22 degrees for 4 to 59 degrees for 3c. This represents as increase of 37 degrees or 168%. Although the (13)C NMR and UV absorption spectra of bridged helicenes 3a-c and unbridged helicene 5 are essentially the same, the molar rotation of 5 is very large compared with those of 3a-c and 4. A red shift (15 nm) in the circular dichroism (CD) spectrum is observed for 4, suggesting that this compound is more planar than 3a-c in solution. In the series of [7]thiaheterohelicenes studied, the minimum helical pitch is 2.70 A for 4.     

Structural chemistry of polycyclic heteroaromatic compounds. Part XI. Photoelectron spectra and electronic structures of tetracyclic hetarenes of the triphenylene type

The UV photoelectron spectra of several tetracyclic heteroaromatic compounds (2-9) which are pi-isoelectronic with triphenylene (1) have been recorded and analysed making use of semiempirical AM1 and PM3 as well as ab initio/DFT B3LYP calculations. In one series of compounds (2-7), the peripheral benzene rings of 1 are successively substituted by thiophene rings that are either [b]- or [c]-annellated with the central benzene unit. In 2-7 only marginal shifts are found for most of the IPs of electrons. In the benzotrithiophenes 5-7, a systematic variation is displayed by IP(pi7). Compared to 1, the pi electron system of benzo[c]trithiophene (7) is approximately two times as much destabilized as in the isomers 5 and 6 with [b]annellated thiophene rings. The IP[n(S)] values of the thiophene derivatives 2-7 indicate that these orbitals are clearly destabilized relative to thiophene. The same holds for the n(O) orbital of the furane derivative 9 in comparison with that of furane. In 9, only the higher pi MOs (pi7-pi9) are destabilized whereas the lower levels (pi1-pi4) are stabilized, and those in between (pi5-pi6) remain essentially unshifted. In the pyrrole derivative 8, all pi MOs are substantially destabilized by about 0.5-1.6 eV relative to 1.     

Comparison of SCC-DFTB and NDDO-based semiempirical molecular orbital methods for organic molecules

Extensive testing of the SCC-DFTB method has been performed, permitting direct comparison to data available for NDDO-based semiempirical methods. For 34 diverse isomerizations of neutral molecules containing the elements C, H, N, and O, the mean absolute errors (MAE) for the enthalpy changes are 2.7, 3.2, 5.0, 5.1, and 7.2 kcal/mol from PDDG/PM3, B3LYP/6-31G(d), PM3, SCC-DFTB, and AM1, respectively. A more comprehensive test was then performed by computing heats of formation for 622 neutral, closed-shell H, C, N, and O-containing molecules; the MAE of 5.8 kcal/mol for SCC-DFTB is intermediate between AM1 (6.8 kcal/mol) and PM3 (4.4 kcal/mol) and significantly higher than for PDDG/PM3 (3.2 kcal/mol). Similarly, SCC-DFTB is found to be less accurate for heats of formation of ions and radicals; however, it is more accurate for conformational energetics and intermolecular interaction energies, though none of the methods perform well for hydrogen bonds with strengths under ca. 7 kcal/mol. SCC-DFTB and the NDDO methods all reproduce MP2/cc-pVTZ molecular geometries with average errors for bond lengths, bond angles, and dihedral angles of only ca. 0.01 A, 1.5 degrees , and 3 degrees . Testing was also carried out for sulfur containing molecules; SCC-DFTB currently yields much less accurate heats of formation in this case than the NDDO-based methods due to the over-stabilization of molecules containing an SO bond.     

Molecular orbital studies of gas-phase interactions between complex molecules

Describing interactions among large molecules theoretically is a challenging task. As an example, we investigated gas-phase interactions between a linear nonionic oligomer and various model compounds (cofactors), which have been reported to associate experimentally, using PM3 semiempirical molecular orbital theory. As oligomer, we studied the hexamer of poly(ethylene oxide) (PEO), and as cofactors, we studied corilagin and related compounds containing phenolic groups (R-OH). These systems are of interest because they are models for PEO/cofactor flocculation systems, used in industrial applications. The PM3 delocalized molecular orbitals (DLMO) describe the bonding between (PEO)6 and cofactors, and some of them cover the complete complex. The DLMOs which cover the traditionally considered hydrogen bonds R-OH...O or R-CH...O show a distinct "pinch", a decrease of the electron density, between the H...O atoms. Calculations of Gibbs free energy, entropy, and enthalpy show that the PEO/cofactor complexes do not form at room temperature, because the loss of entropy exceeds the increase in enthalpy. The change in enthalpy is linearly related to the change in entropy for the different complexes. Even though bond lengths, bond angles, DLMOs, and electron densities for the PEO/cofactor complexes are consistent with the definition of hydrogen bonds, the number of intermolecular R-OH...O and R-CH...O bonds does not correlate with the enthalpy of association, indicating that the bonding mechanism for these systems is the sum of many small contributions of many delocalized orbitals.     

Photochromic Dithienylethene‐Containing Triarylborane Derivatives: Facile Approach to Modulate Photochromic Properties with Multi‐addressable Functions

A series of dithienylethene‐containing triarylboranes has been designed, synthesized, and characterized. The electrochemistry, photophysics, and photochromic behavior have also been studied. The photophysical and photochromic properties could be facilely tuned in this system by varying the thiophene spacers (thiophene, thienothiophene, and bithiophene) between the dithienylethene and the dimesitylboron (BMes₂) or the position of the BMes₂ substitution in the thiophene spacers. The absorption of closed form has been found to be more sensitive towards the structural modification upon incorporation of the BMes₂ unit. Moreover, multi‐addressable photochromic reactivity is obtained upon addition of Lewis base (F^?), which is due to the formation of boron–Lewis base adduct. The dependence of the photophysical and photochromic properties on the thiophene spacers and the position of the BMes₂ substitution has been further supported by computational studies.     

Theoretical studies on heats of formation for cubylnitrates using density functional theory B3LYP method and semiempirical MO methods

The heats of formation (HOF) have been calculated for all the 21 cubylnitrate compounds using the semiemprical molecular orbital (MO) methods (MINDO/3, MNDO, AM1, and PM3) and for 8 of 21 cubylnitrates containing 1–4 ? ONO₂ groups using the density functional theory (DFT) method at the B3LYP/6‐31G* level by means of designed isodesmic reactions. The cubane cage skeletons in cubylnitrate molecules have been kept in setting up isodesmic reactions to produce more accurate and reliable results. It is found that there are good linear relationships between the HOFs of the 8 cubylnitrates calculated using B3LYP/6‐31G* and two semiempirical MO (PM3 and AM1) methods, and the linear correlation coefficients of PM3 and AM1 methods are 0.9901 and 0.9826, respectively. Subsequently, the accurate HOFs at B3LYP/6‐31G* level of other 13 cubylnitrates containing 4–8 ? ONO₂ groups are obtained by systematically correcting their PM3‐calculated HOFs. Compared with noncaged nitrates, all the 21 cubylnitrates have high heats of formation implying that they may be very powerful energetic materials and have highly exploitable value. The relationship between the HOFs and the molecular structures of cubylnitrates has been discussed. © 2001 John Wiley & Sons, Inc. Int J Quantum Chem, 2001     

Luminescent digold ethynyl thienothiophene and dithienothiophene complexes; their synthesis and structural characterisation

A series of protected and terminal dialkynes with extended pi-conjugation through the fused oligothienyl linker unit in the backbone, 2,5-bis(trimethylsilylethynyl)thieno[3,2-b]thiophene 1a, 5,5'-bis(trimethylsilylethynyl)dithieno[3,2-b:2',3'-d]thiophene 1b, 2,5-bis(ethynyl)thieno[3,2-b]thiophene 2a, 5,5'-bis(ethynyl)dithieno[3,2-b:2',3'-d]thiophene 2b, has been synthesized and characterised. The digold alkynyl complexes [(Ph3P)Au(C[triple bond]C)(C6H2S2)(C[triple bond]C)Au(PPh3)] 3a and [(Ph3P)Au(C[triple bond]C)(C8H2S3)(C[triple bond]C)Au(PPh3)] 3b have then been prepared by the reaction of two equivalents of Ph3PAuCl and a methanolic KOH solution of 1a and 1b, respectively. The complexes have been characterised spectroscopically. The crystal structures show that the gold centres adopt a linear two-coordinate geometry appropriate for Au(i) complexes. Within the crystals adjacent molecules are linked by Au...S intermolecular interactions in the range 3.48-3.89 A, but there are no short Au...Au contacts. The absence of Au...Au interactions in solution is confirmed by UV/visible absorption and emission spectroscopy, the spectra being dominated by ligand-centred pi-pi* interactions.     

Structural chemistry of polycyclic heteroaromatic compounds. Part 13. Photoelectron spectra and electronic structures of tricyclic hetarenes of the anthracene type.

The ultraviolet photoelectron spectra of two tricyclic heteroaromatic compounds (2,3) that are pi-isoelectronic with anthracene (1) have been recorded and analysed making use of semi-empirical AM1 and PM3, as well as density functional theory (DFT) B3LYP calculations. In compounds 2 and 3, one peripheral benzene ring of compound 1 is substituted by a thiophene ring that is either [b]- or [c]-annellated. In compounds 2 and 3, only small shifts are found for most of the ionization potentials of pi electrons. Since the ionization energies of all occupied pi molecular orbitals of compounds 1-3 could be assigned, a direct comparison of their pi electron energy is possible. Compared with compound 1, the pi-electron system of naphtho[2,3-b]thiophene (2) is stabilized by 0.6 eV, while that of naphtho[2,3-c]thiophene (3) is destabilized by 0.2 eV. [b]-Annellation of the thiophene ring is thus favourable while [c]-annellation is unfavourable.     

Thiophene–phenylene/naphthalene‐based step‐ladder copolymers

A series of step‐ladder copolymers based on thiophene–phenylene–thiophene SL1 ‐ SL3 and thiophene–naphthylene–thiophene SL4 repeat units with varying lengths of the oligothiophene segment has been designed and synthesized via a microwave‐assisted Stille‐type cross‐coupling reaction followed by a polymer‐analogous cyclization reaction. The optical properties of the step‐ladder copolymers have been investigated in detail, in particular at low temperature and in the solid‐state. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 7342–7353, 2008     

Quantum-chemical simulation of the synthesis of structural fragments of humic substances analogs

Semiempirical calculations by the PM3 method were used to optimize the structural fragments of the precursors of synthetic humic and fulvic acids. Changes in the thermodynamic parameters (enthalpy of formation, entropy, and Gibbs energy) were determined and a conclusion was drowm if the postulated processes are thermodynamically possible.     

The gaseous enthalpy of formation of the ionic liquid 1-butyl-3-methylimidazolium dicyanamide from combustion calorimetry, vapor pressure measurements, and ab initio calculations

Ionic liquids are attracting growing interest as alternatives to conventional molecular solvents. Experimental values of vapor pressure, enthalpy of vaporization, and enthalpy of formation of ionic liquids are the key thermodynamic quantities, which are required for the validation and development of the molecular modeling and ab initio methods toward this new class of solvents. In this work, the molar enthalpy of formation of the liquid 1-butyl-3-methylimidazolium dicyanamide, 206.2 +/- 2.5 kJ.mol-1, was measured by means of combustion calorimetry. The molar enthalpy of vaporization of 1-butyl-3-methylimidazolium dicyanamide, 157.2 +/- 1.1 kJ.mol-1, was obtained from the temperature dependence of the vapor pressure measured using the transpiration method. The latter method has been checked with measurements of 1-butyl-3-methylimidazolium bis(trifluoromethylsulfonyl) imide, where data are available from the effusion technique. The first experimental determination of the gaseous enthalpy of formation of the ionic liquid 1-butyl-3-methylimidazolium dicyanamide, 363.4 +/- 2.7 kJ.mol-1, from thermochemical measurements (combustion and transpiration) is presented. Ab initio calculations of the enthalpy of formation in the gaseous phase have been performed for 1-butyl-3-methylimidazolium dicyanamide using the G3MP2 theory. Excellent agreement with experimental results has been observed. The method developed opens a new way to obtain thermodynamic properties of ionic liquids which have not been available so far.     

HIGH TEMPERATURE REACTIONS OF HYDROGEN SULFIDE AND THIOLS WITH ORGANIC COMPOUNDS

Abstract

The high temperature reaction of hydrogen sulfide with chloro- and bromosubstituted aromatic and heteroaromatic compounds is a convenient method for synthesis of the corresponding thiols and sulfides. The reaction of hydrogen sulfide with ortho-dihalosubstituted aromatic compounds may be directed toward the formation of thianthrene or dibenzo thiophene and their derivatives. The high temperature reaction of thiophenol with chloro- and bromoderivatives of aromatic and heteroaromatic compounds affords the corresponding mixed sulfides. The reaction with ortho-substituted halogen derivatives leads to formation of the sulfur heterocycles of the thianthrene, thioxanthene and dibenzothiophenene series.

The high temperature reaction of hydrogen sulfide with vinyl chloride gives vinylthiol and thiophene. Hydrogen sulfide initiates pyrolytic transformations of thiophene, aniline and benzaldehyde into dithienyls, 5.10-dihydrophenazine and stilbene, respectively. The reaction mechanism has been discussed.