From tropos to atropos: 5,5′-bridged 2,2′-bis(diphenylphosphino)biphenyls as chiral ligands for highly enantioselective palladium-catalyzed hydrogenation of α-phthalimide ketones

A class of atropisomeric diphosphine ligands with a wide range of dihedral angles has been developed. X-ray study of the Pd(II) complexes of these ligands showed that as the bridge length increased, the dihedral angles and the ligand bite angles increased as well, while an excessive increase in bridge length had a reverse effect. It was found that there was a correlation between the ligand dihedral angles and the enantioselectivity in Pd-catalyzed asymmetric hydrogenation of α-phthalimide ketones, and excellent enantioselectivities of up to 99% ee were afforded.     

Leveraging Fluorescent Emission to Unitary Yield: Dimerization of Polycyclic Aromatic Hydrocarbons

We report on the synthesis and characterization of novel substituted 1,1′‐biperylene‐2,2′‐diols in which the dihedral angle between the two polycyclic aromatic hydrocarbon (PAH) units is tailored from ca. 60° to ca. 90° in the solid state by introduction of cyclo‐etheric straps or sterically hindered groups such as the triisopropylsilyl (TIPS) group. Depending on the type of substitution, we lock the dihedral angle between the perylenyl moieties enabling fine‐tuning of the molecular optoelectronic properties, with the molecules displaying the smallest angles acting as exceptionally strong emitters with unitary quantum yields.     

Intricacies of ligand coordination in tricarbonylchromium(0) complexes with ortho‐ and para‐fluorobiphenyls

The steric and electronic factors that influence which of the two rings of a substituted biphenyl ligand coordinates to chromium are of interest and it has been suggested that haptotropic rearrangements within these molecules may be limited if the arene–arene dihedral angle is too large. Two tricarbonylchromium(0) complexes and their respective free ligands have been characterized by single‐crystal X‐ray diffraction. In the solid state, tricarbonyl[(1′,2′,3′,4′,5′,6′‐η)‐2‐fluoro‐1,1′‐biphenyl]chromium(0), [Cr(C₁₂H₉F)(CO)₃], (I), exists as the more stable isomer with the nonhalogenated arene ring ligated to the metal center. Similarly, tricarbonyl[(1′,2′,3′,4′,5′,6′‐η)‐4‐fluoro‐1,1′‐biphenyl]chromium(0) crystallizes as the more stable isomer with the phenyl ring bonded to the Cr⁰ center. The arene–arene dihedral angles in these complexes are 55.77 (4) and 52.4 (5)°, respectively. Structural features of these complexes are compared to those of the DFT‐optimized geometries of ten tricarbonyl[(η⁶‐C₆H₅)(4‐F‐C₆H₄)]chromium model complexes. The solid‐state structures of the free ligands 2‐fluoro‐1,1′‐biphenyl and 4‐fluoro‐1,1′‐biphenyl, both C₁₂H₉F, exhibit arene–arene dihedral angles of 54.83 (7) and 0.71 (8)°, respectively. The molecules of the free ligands occupy crystallographic twofold axes and exhibit positional disorder. Weak intermolecular C—H…F interactions are observed in all four structures.     

A New Class of Modular P,N‐Ligand Library for Asymmetric Pd‐Catalyzed Allylic Substitution Reactions: A Study of the Key Pd–π‐Allyl Intermediates

A new class of modular P,N‐ligand library has been synthesized and screened in the Pd‐catalyzed allylic substitution reactions of several substrate types. These series of ligands can be prepared efficiently from easily accessible hydroxyl–oxazole/thiazole derivatives. Their modular nature enables the bridge length, the substituents at the heterocyclic ring and in the alkyl backbone chain, the configuration of the ligand backbone, and the substituents/configurations in the biaryl phosphite moiety to be easily and systematically varied. By carefully selecting the ligand components, therefore, high regio‐ and enantioselectivities (ee values up to 96 %) and good activities are achieved in a broad range of mono‐, di‐, and trisubstituted linear hindered and unhindered substrates and cyclic substrates. The NMR spectroscopic and DFT studies on the Pd–π‐allyl intermediates provide a deeper understanding of the effect of ligand parameters on the origin of enantioselectivity.     

Synthesis of Aminophosphine Ligands with Binaphthyl Backbones for Silver(I)-catalyzed Enantioselective Allylation of Benzaldehyde

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Comparative Study of Ruthenium(II) and Ruthenium(III) Complexes with the Ligand dmbpy (dmbpy = 4, 4′‐Dimethyl‐2, 2′‐bipyridine)

The complex cis‐[Ru^III(dmbpy)₂Cl₂](PF₆) ( 2 ) (dmbpy = 4, 4′‐dimethyl‐2, 2′‐bipyridine) was obtained from the reaction of cis‐[Ru^II(dmbpy)₂Cl₂] ( 1 ) with ammonium cerium(IV) nitrate followed by precipitation with saturated ammonium hexafluoridophosphate. The ¹H NMR spectrum of the Ru^III complex confirms the presence of paramagnetic metal atoms, whereas that of the Ru^II complex displays diamagnetism. The ³¹P NMR spectrum of the Ru^III complex shows one signal for the phosphorus atom of the PF₆^– ion. The perspective view of each [Ru^II/III(dmbpy)₂Cl₂]^0/+ unit manifests that the ruthenium atom is in hexacoordinate arrangement with two dmbpy ligands and two chlorido ligands in cis position. As the oxidation state of the central ruthenium metal atom becomes higher, the average Ru–Cl bond length decreases whereas the Ru–N (dmbpy) bond length increases. The cis‐positioned dichloro angle in Ru^III is 1.3° wider than that in the Ru^II. The dihedral angles between pair of planar six‐membered pyridyl ring in the dmbpy ligand for the Ru^II are 4.7(5)° and 5.7(4)°. The observed inter‐planar angle between two dmbpy ligands in the Ru^II is 89.08(15)°, whereas the value for the Ru^III is 85.46(20)°.     

Secondary Interactions or Ligand Scrambling? Subtle Steric Effects Govern the Iridium(I) Coordination Chemistry of Phosphoramidite Ligands

The like and unlike isomers of phosphoramidite (P*) ligands are found to react differently with iridium(I), which is a key to explaining the apparently inconsistent results obtained by us and other research groups in a variety of catalytic reactions. Thus, the unlike diastereoisomer (aR,S,S)‐[IrCl(cod)( 1 a )] ( 2 a ; cod=1,5‐cyclooctadiene, 1 a =(aR,S,S)‐(1,1′‐binaphthalene)‐2,2′‐diyl bis(1‐phenylethyl)phosphoramidite) forms, upon chloride abstraction, the monosubstituted complex (aR,S,S)‐[Ir(cod)(1,2‐η‐ 1 a ,κP)]⁺ ( 3 a ), which contains a chelating P* ligand that features an η² interaction between a dangling phenyl group and iridium. Under analogous conditions, the like analogue (aR,R,R)‐ 1 a′ gives the disubstituted species (aR,R,R)‐[Ir(cod)( 1 a′ ,κP)₂]⁺ ( 4 a′ ) with monodentate P* ligands. The structure of 3 a was assessed by a combination of X‐ray and NMR spectroscopic studies, which indicate that it is the configuration of the binaphthol moiety (and not that of the dangling benzyl N groups) that determines the configuration of the complex. The effect of the relative configuration of the P* ligand on its iridium(I) coordination chemistry is discussed in the context of our preliminary catalytic results and of apparently random results obtained by other groups in the iridium(I)‐catalyzed asymmetric allylic alkylation of allylic acetates and in rhodium(I)‐catalyzed asymmetric cycloaddition reactions. Further studies with the unlike ligand (aS,R,R)‐(1,1′‐binaphthalene)‐2,2′‐diyl bis{[1‐(1‐naphthalene‐1‐yl)ethyl]phosphoramidite} ( 1 b ) showed a yet different coordination mode, that is, the η⁴‐arene–metal interaction in (aS,R,R)‐[Ir(cod)(1,2,3,4‐η‐ 1 b ,κP)]⁺ ( 3 b ).     

Enantioselective Palladium‐Catalyzed C?H Functionalization of Indoles Using an Axially Chiral 2,2′‐Bipyridine Ligand

A palladium‐catalyzed enantioselective C H functionalization of indoles was achieved with an axially chiral 2,2′‐bipyridine ligand, thus providing the desired indol‐3‐acetate derivatives with up to 98 % ee. Moreover, the reaction protocol was also effective for asymmetric O H insertion reaction of phenols using α‐aryl‐α‐diazoacetates. This represents the first successful application of bipyridine ligands with axial chirality in palladium‐catalyzed carbene migratory insertion reactions.     

A new one‐dimensional cadmium(II) coordination polymer incorporating 4‐[4‐(1H‐imidazol‐1‐yl)phenyl]pyridine and 5‐hydroxybenzene‐1,3‐dicarboxylate ligands

The design and synthesis of new organic lgands is important to the rapid development of coordination polymers (CPs). However, CPs based on asymmetric ligands are still rare, mainly because such ligands are usually expensive and more difficult to synthesize. The new asymmetric ligand 4‐[4‐(1H‐imidazol‐1‐yl)phenyl]pyridine (IPP) has been used to construct the title one‐dimensional coordination polymer, catena‐poly[[[aqua{4‐[4‐(1H‐imidazol‐1‐yl‐κN³)phenyl]pyridine}cadmium(II)]‐μ‐5‐hydroxybenzene‐1,3‐dicarboxylato‐κ³O¹,O^1′:O³] monohydrate], {[Cd(C₈H₄O₅)(C₁₄H₁₁N₃)₂(H₂O)]·H₂O}_n, under hydrothermal reaction of IPP with Cd^II in the presence of 5‐hydroxyisophthalic acid (5‐OH‐H₂bdc). The Cd^II cation is coordinated by two N atoms from two distinct IPP ligands, three carboxylate O atoms from two different 5‐OH‐bdc²⁻ dianionic ligands and one water O atom in a distorted octahedral geometry. The cationic [Cd(IPP)₂]²⁺ nodes are linked by 5‐OH‐bdc²⁻ ligands to generate a one‐dimensional chain. These chains are extended into a two‐dimensional layer structure via O—H…O and O—H…N hydrogen bonds and π–π interactions.     

SYNPHOS®, a new chiral diphosphine ligand: synthesis, molecular modeling and application in asymmetric hydrogenation

A new optically active diphosphine ligand, [(5,6),(5′,6′)-bis(ethylenedioxy)biphenyl-2,2′-diyl]bis(diphenylphosphine) (SYNPHOS®) has been synthesized and used in ruthenium-catalyzed asymmetric hydrogenation. This new ligand has been compared to other diphosphines (BINAP and MeO-BIPHEP), regarding their dihedral angles and the enantioselectivity in the ruthenium mediated hydrogenation reaction.     

Bis(2‐{1‐[(2,4,6‐trimethylphenyl)imino]ethyl}pyrrol‐1‐ido‐κ2N,N′)nickel(II): a supramolecular structure formed by C—H...π(arene) hydrogen bonds

<!?tlsb=‐0.2pt>Nitrogen‐based polydentate ligands are of interest owing to their flexible complexation to transition metal atoms. For the title compound, [Ni(C₁₅H₁₇N₂)₂], a transition metal complex formed by the coordination of two identical N,N′‐bidentate mono(imino)pyrrolyl ligands to an Ni^II centre, an X‐ray crystal diffraction study indicates that the two ligands show an inverted arrangement with respect to one another around the Ni^II centre, which is located on a crystallographic inversion centre. The planes of the aromatic substituents at the imine N atoms of the ligands show dihedral angles of 85.91 (5)° with respect to the NiN₄ plane. The Ni—N bond lengths are in the range 1.9072 (15)–1.9330 (15) Å and the N_imino—Ni—N_pyrrole bite angles are 83.18 (6)°. The Ni—N_pyrrole bond is substantially shorter than the Ni—N_imino bond. Molecules are linked into an extensive network by means of intermolecular C—H...π(arene) hydrogen bonds in which every molecule acts both as hydrogen‐bond donor and acceptor. The supramolecular assembly takes the form of an infinite two‐dimensional sheet.     

Highly Modular P?OP Ligands for Asymmetric Hydrogenation: Synthesis,Catalytic Activity,and Mechanism

A library of enantiomerically pure P? OP ligands (phosphine–phosphite), straightforwardly available in two synthetic steps from enantiopure Sharpless epoxy ethers is reported. Both the alkyloxy and phosphite groups can be optimized for maximum enantioselectivity and catalytic activity. Their excellent performance in the Rh‐catalyzed asymmetric hydrogenation of a wide variety of functionalized alkenes (26 examples) and modular design makes them attractive for future applications. The lead catalyst incorporates an (S)‐BINOL‐derived (BINOL=1,1′‐bi‐2‐naphthol) phosphite group with computational studies revealing that this moiety has a dual effect on the behavior of our P? OP ligands. On one hand, the electronic properties of phosphite hinder the binding and reaction of the substrate in two out of the four possible manifolds. On the other hand, the steric effects of the BINOL allow for discrimination between the two remaining manifolds, thereby elucidating the high efficiency of these catalysts.     

Local deformations of polymers with nonplanar rigid main‐chain internal coordinates

A procedure for local deformation of a polymer by concerted rotation of several main‐chain dihedral angles has been adapted recently to be an elementary move in Monte Carlo simulations. We expand the applicability of the move by generalizing the formalism to allow fixed dihedral angles that sequentially interrupt the rotatable bonds to be nonplanar. The method is applied to the simulation of a small protein in which the dihedral angles of the peptide bonds are allowed to deviate from their ideal values and to the simulation of an RNA hairpin loop in which the main chain (C3′ C4′) bonds that are constrained by the sugar rings are rigid but nonplanar. The move is found to increase the rate at which the systems explore their accessible configuration spaces. The relation of the results to previous studies and possible enhancements of the method are discussed. © 2000 John Wiley & Sons, Inc. J Comput Chem 21: 1132–1144, 2000     

Diamine‐Catalyzed Addition of ZnEt2 to PhC(O)CF3: Two Mechanisms and Autocatalytic Asymmetric Enhancement

NMR spectroscopic studies of the catalytic addition reaction of ZnEt₂ to PhC(O)CF₃ in the presence of three very efficient catalysts [TMEDA, tBuBOX, and L ; where L is a chiral diamine synthesized from optically pure (R,R)‐1,2‐diphenylethylenediamine and (S)‐2,2′‐bis‐(bromomethyl)‐1,1′‐binaphthalene] reveal large differences in their behavior. For the ligands TMEDA and tBuBOX, the catalysis shows no unusual features and proceeds via [(N?N)Zn(Et){OC(CF₃)(Et)Ph}]. For N?N? L , the observation of autocatalytic asymmetric enhancement during the catalysis, and unusual inverse concentration dependence on the reaction rate, indicate the participation of an additional novel catalytic cycle that goes through a dinuclear intermediate containing one ZnEt₂ and one ZnEt fragment connected by N?N and OR bridges. Interestingly, the ¹⁹F NMR signals of the main product of the reaction ([Zn(Et){OC*(CF₃)(Et)Ph}]₂) allowed us to assess the enantioselectivity of the processes in situ without the assistance of chiral chromatography.     

Adaptative Biaryl Phosphite–Oxazole and Phosphite–Thiazole Ligands for Asymmetric Ir‐Catalyzed Hydrogenation of Alkenes

A library of readily available phosphite–oxazole/thiazole ligands ( L1 a – g – L7 a – g ) was applied in the Ir‐catalyzed asymmetric hydrogenation of several largely unfunctionalized E‐ and Z‐trisubstituted and 1,1‐disubstituted terminal alkenes. The ability of the catalysts to transfer chiral information to the product could be tuned by choosing suitable ligand components (bridge length, the substituents in the heterocyclic ring and the alkyl backbone chain, the configuration of the ligand backbone, and the substituents/configurations in the biaryl phosphite moiety), so that enantioselectivities could be maximized for each substrate as required. Enantioselectivities were therefore excellent (enantiomeric excess (ee) values up to >99 %) for a wide range of E‐ and Z‐trisubstituted and 1,1‐disubstituted terminal alkenes. The biaryl phosphite moiety was a very advantageous ligand component in terms of substrate versatility.     

Solvent Extraction of Ag(I) and Cu(II) with New Macrocyclic Schiff Bases

Two new macrocyclic Schiff bases (II) and (III) containing nitrogen ‐ oxygen donor atoms were synthesized by reaction between diethylene triamine or 2,2′‐(ethylenedioxy)bis(ethylamine) and the intermediate compound: 1,4‐bis(6‐methoxy‐2‐formylphenyl)‐1,4‐dioxabutane (I). Identification of these macrocyclic Schiff bases: 1,12, 15,18, 29,32 ‐ hexaaza ‐ [3,4;8,9;20,21;26,27‐tetra‐(6′‐methoxyphenyl)]‐5,8,22,25‐tetraoxa cyclo tetratriacosine‐1,11,18,28‐tetraene. (II) 1,12,21,32‐tetraaza‐[3,4;9,10;23,24;29, 30‐tetra‐(6′‐methoxyphenyl)]‐5,8,15,18,25,28,35,38‐octaoxa cyclo ‐ tetracontane‐1,11,21,31‐tetraene. (III) were determined by elemental analysis (LC‐MS), (IR) and (¹H and ¹³C‐NMR) spectroscopy. The liquid‐liquid extraction of metal picrates such as Ag⁺ and Cu²⁺ from aqueous phase to organic phase was carried out using these ligands. The effect of chloroform and dichloromethane as organic solvents over the metal picrate extractions were investigated at 25 ± 0.1 °C by using atomic absorption spectrometer.     

Bis[μ‐1,2‐bis(2‐pyridyl)ethyne‐κ2N:N′]bis[aquadinitratocadmium(II)]

Two twisted 1,2‐bis(2‐pyridyl)­ethyne ligands bridge two Cd²⁺ centers in the C₂‐symmetric title complex, [Cd₂(NO₃)₄(μ‐C₁₂H₈N₂)₂(H₂O)₂]. The bridging ligands arch across one another creating a `zigzag loop' molecular geometry. Two nitrate ions and a water mol­ecule complete the irregular seven‐coordinate Cd‐atom environment. The dihedral angles between the equivalent pyridyl ring planes of the two independent ligands are 67.2 (1)°. O_water—H⃛O_nitrate hydrogen bonding creates two‐dimensional layers parallel to the ab plane.     

Quantitative and in situ Detection of Oxidatively Generated DNA Damage 8,5′‐Cyclo‐2′‐Deoxyadenosine Using an Immunoassay with a Novel Monoclonal Antibody

Xeroderma pigmentosum (XP) is a genetic disorder associated with defects in nucleotide excision repair, which eliminates a wide variety of helix‐distorting types of DNA damage including sunlight‐induced pyrimidine dimers. In addition to skin disease, approximately 30% of XP patients develop progressive neurological disease, which has been hypothesized to be associated with the accumulation of a particular type of oxidatively generated DNA damage called purine 8,5′‐cyclo‐2′‐deoxynucleosides (purine cyclonucleosides). However, there are no currently available methods to detect purine cyclonucleosides in DNA without the need for DNA hydrolysis. In this study, we generated a novel monoclonal antibody (CdA‐1) specific for purine cyclonucleosides in single‐stranded DNA that recognizes 8,5′‐cyclo‐2′‐deoxyadenosine (cyclo‐dA). An immunoassay using CdA‐1 revealed a linear dose response between known amounts of cyclo‐dA in oligonucleotides and the antibody binding to them. The quantitative immunoassay revealed that treatment with Fenton‐type reagents (CuCl₂/H₂O₂/ascorbate) efficiently produces cyclo‐dA in DNA in a dose‐dependent manner. Moreover, immunofluorescent analysis using CdA‐1 enabled the visualization of cyclo‐dA in human osteosarcoma cells, which had been transfected with oligonucleotides containing cyclo‐dA. Thus, the CdA‐1 antibody is a valuable tool for the detection and quantification of cyclo‐dA in DNA, and may be useful for characterizing the mechanism(s) underlying the development of XP neurological disease.     

Enantioselective addition of diethylzinc to aldehydes catalyzed by 3,3′‐bis(2‐oxazolyl)‐1,1′‐bi‐2‐naphthol (BINOL‐Box) ligands derived from 1,1′‐bi‐2‐naphthol

With 3,3′‐bis(2‐oxazolyl)‐1,1′‐bi‐2‐naphthols (BINOL‐Box) synthesized from 1,1′‐bi‐2‐naphthol (BINOL), the enantioselective addition of diethylzinc to aryl aldehydes proceeded smoothly to give secondary aryl alcohols in good yield with good enantioselectivity. Interestingly, the yields and enantioselectivities were affected by the mixing sequence of the reactants. Furthermore, the synthesis of both enantiomers of the addition products has been achieved using the same ligands by choosing achiral additives, Ti(O‐iPr)₄ and 4A molecular sieves. Copyright © 2000 John Wiley & Sons, Ltd.