辅酶NADH模型物还原活化烯烃反应机理研究

对本课题组近年来研究的辅酶NADH模型物还原活化烯烃的反应机理进行了综述。对于辅酶模型物还原2-溴-1-苯基亚乙基丙二腈类化合物的反应,依赖辅酶模型物和底物的结构,反应可以按一步的负氢转移机理或按电子转移机理进行。用手性辅酶模型物进行这一反应,可得到具有中等光学活性的环丙烷衍生物。实验结果表明辅酶模型物BNAH与1,1-二苯基-2,2-二硝基乙烯的反应的过渡态具有部分双自由基和部分共价键形成的特征,为Pross-Shaik“曲线交叉模型”所预测的“中间机理”提供了直接的证据。BNAH与9-亚芴基丙二腈的反应经历电子转移和负电荷在9-位碳上的碳负离子中间体,动力学同位素效应为2.6。     

NO供体亚硝酸异戊酯作用下汉斯酯的芳香化反应研究

汉斯酯1,4-二氢吡啶衍生物作为NADH辅酶重要的模型化合物[1-2],因为其与生物过程中NADH辅酶氧化还原过程[3-4]极其相似而吸引了众多极其相似而吸引了众多.     

烟酰胺辅酶反应中心结构选择1,4-二氢烟酰胺的热力学和动力学根源

合成了对位取代的1-苯基-1,4-二氢烟酰胺和对位取代的1-苯基-1,2-二氢烟酰胺作为烟酰胺辅酶两种模型物, 分别测定了它们与N-甲基吖啶正离子反应热和活化吉布斯自由能. 通过对其热力学参数和动力学参数的比较发现, 虽然1,2-二氢烟酰胺辅酶模型物与吖啶正离子反应热力学驱动力大于相应的1,4-二氢烟酰胺辅酶模型物与吖啶正离子反应热力学驱动力, 但前者具有很高的活化熵, 从而导致其活化吉布斯自由能反而大于后者. 表明烟酰胺辅酶NADH反应中心结构在其氧化还原循环进化过程中选择1,4-二氢烟酰胺而不是1,2-二氢烟酰胺的根本原因是烟酰胺辅酶反应中心结构二氢吡啶环2位上的氢原子较4位上的氢原子有较大的空间位阻.     

类芳香金属配合物-[Ni(PnAO)-6H]~0的生成反应动力学及机理研究

用紫外可见光谱法研究了在碱性溶液中[Ni(PnAO)-H]~++H_2O_2→[Ni(PnAO)-6H]~0的反应动力学并提出了包含自由基·OH的复杂反应机理。采用经典确定反应机理的方法及Gauss-Newton-Marquardt非线性拟合和Runge-Kutta解一次微分方程组程序处理数据并获得了良好的结果。改变碱浓度及双氧水浓度所得结果支持所拟机理。     

两种异马来二氰基二硫烯镍(II)-取代苄基喹啉鎓盐的制备及其光谱性质和晶体结构

以甲醇为溶剂,将异马来二氰基二硫烯酸钾[K2(i-mnt)]和六水氯化镍分别与溴化4-溴苄基喹啉盐([4-BrBzQl]Br)或溴化4-硝基苄基喹啉盐([4-NO2BzQl]Br)直接反应,得到两种新的离子对配合物[4-BrBzQl]2[Ni(i-mnt)2](1)和[4-NO2BzQl]2[Ni(i-mnt)2](2);测定了其红外光谱和紫外-可见光谱,并利用X射线衍射表征了配合物1的晶体结构.结果表明,配合物[4-BrBzQl]2[Ni(i-mnt)2]为三斜晶系,P-1空间群,其每个不对称单元含半个[Ni(i-mnt)2]2-阴离子和1个[4-BrBzQl]+阳离子,晶体中的阴、阳离子通过静电作用和C-H…S、C-H…N氢键作用形成网络结构.     

NAD(P)H模型引发的还原环化——2,2-双取代1,2-二氢茚的合成

辅酶NAD(P)H在生物氧化还原反应中起着重要作用[1].1-苄基-1,4-二氢尼古丁酰胺(BNAH)作为其模型物,被广泛用于物理有机和生物化学的研究之中[2].虽然绝大多数的研究都集中于还原反应机理方面[3,4],BNAH作为还原剂在有机合成中的应用也是值得注意的.我们曾用BNAH还原2-溴-1-苯亚乙基丙二腈及其类似物合成取代环丙烷[5～7],方法简便.五元环结构广泛存在于萜类和甾体等天然产物中.对于茚等苯并五元环结构的合成已有许多方法[8～11]. 其中,2,2-双取代1,2-二氢茚(1)(吸电子取代基)是用邻-二溴甲基苯与丙二腈等活泼亚甲基化合物在DMSO中,NaH存在下双分子缩合制备的[12].     

金属卟啉MTPPS对NADH氧化的催化作用

中位-四(对-磺基苯基)卟啉的铁、锰配合物(FeTPPS和MnTPPS)用作NADH氧化的催化剂,均相溶液中的反应动力学用紫外可见光谱测定。结果表明,在除氧的中性溶液中FeTPPS和MnTPPS降低了NADH在玻碳电极上氧化的过电位,过程用EC再生机理解释。在氧饱和的溶液中MTPPS起电子转移中介体的作用促进NADH氧化,其还原态被O~2氧化而生。测得FeTPPS和NADH反应的速率常数为3.3mol^-^1.L.s^-^1,而MnTPPS和NADH反应的速率常数约为FeTPPS的1/2。讨论了MTPPS作为NADH仿生氧化催化剂的前景。     

双核铜蛋白模型化合物的合成、氧合和催化苯偶姻的氧化

在碱的作用下,2,4-双(N-咪唑甲基)-6-取代苯酚(1)和2,6-双(N-咪唑甲基)-4-氯苯酚(2)与1,2-二溴乙烷、1,3-二溴丙烷、1,4-二溴丁烷或α,α'-二溴间二甲苯反应,合成了新型的模型配体(3～9)。配体与[Cu(CH~3CN)~4]ClO~4反应,得到两个咪唑基与铜配位的双核铜蛋白模型化合物(10～16)。研究了模型物的氧合作用,发现模型物15和氧气反应,发生分子内的羟化,生成μ-酚氧基-μ-羟基的双核铜(Ⅱ)配合物,其它模型与氧气反应,生成双(μ-羟基)双核铜(Ⅱ)配合物。以4为例,详细研究了其模型物催化氧化苯偶姻的反应及反应动力学。考查了碱、外加配体、金属离子等对氧化反应的影响,发现模型物的活性是铜盐或单核铜配合物活性的近六倍。求出了反应的动力学参数V~m~a~x、k~m分别为9.47×10^-^5mol·dm^-^3·s^-^1和0.0418mol·dm^-^3,表明模型物催化的苯偶姻反应,遵从Michaelis-Menten动力学规律。     

Hantzsch ester衍生物及其离子基N(C)-H键断裂能量及在其反应机理研究中的应用

NAD(P)H辅酶氧化还原反应模拟研究在生物有机化学中一直占有显著的位置。Hantzsch 1,4-二氢吡啶作为NAD(P)H辅酶的一种类似物,不仅在有机合成、医药、生化等方面,而且在辅酶NAD(P)H模拟反应研究中均具有广泛的应用^[1]。虽然Hantzsch 1,4-二氢吡啶与生物活性分子的反应已进行了大量的研究,但其反应机理即Hantzsch 1,4-二氢吡啶中1位N-H键和4位C-H键孰先孰后断裂仍存在较大争议。若能测得Hantzsch 1,4-二氢吡啶及其离子基中N-H和C-H键的断裂能,应能为阐释其反应机理提供有说服力的依据。     

超临界二氧化碳中卟啉与钴(II)、镍(II)、锌(II)配合物反应动力学

用紫外-可见光谱研究了钴(II)、镍(II)、锌(II)的1, 1, 1, 5, 5, 5-六氟-2, 4-戊二酮-二水配合物[M(hfac)2(H₂O)₂, M=Co、Ni、Zn]与5, 10, 15, 20-四(五氟苯基)卟啉[H2tpfpp]在超临界二氧化碳中反应生成金属卟啉[M(tpfpp)]的反应动力学. 在金属配合物大大过量时, 反应对卟啉为一级. 其表观一级速率常数随钴(II)、镍(II)配合物的浓度增加先增加、而后趋于稳定, 而表观一级速率常数随锌(II)配合物的浓度增加线形增加. 根据实验事实, 讨论了反应的机理, 得到了相应的热力学和动力学参数.     

Choice of solvent (MeCN vs H(2)O) decides rate-limiting step in S(N)Ar aminolysis of 1-fluoro-2,4-dinitrobenzene with secondary amines: importance of Brønsted-type analysis in acetonitrile

A kinetic study is reported for nucleophilic substitution reactions of 2,4-dinitro-1-fluorobenzene (DNFB) with a series of secondary amines in MeCN and H2O at 25.0 degrees C. The reaction in MeCN results in an upward curvature in the plot of k(obsd) vs [amine], indicating that the reaction proceeds through a rate-limiting proton transfer (RLPT) mechanism. On the contrary, the corresponding plot for the reaction in H2O is linear, implying that general base catalysis is absent. The ratios of the microscopic rate constants for the reactions in MeCN are consistent with the proposed mechanism, e.g., the facts that k2/k(-1) < 1 and k3/k2 > 10(2) suggest that formation of a Meisenheimer complex occurs before the rate-limiting step and the deprotonation by a second amine molecule becomes dominant when [amine] > 0.01 M, respectively. The Br?nsted-type plots for k1k2/k(-1) and k1k3/k(-1) are linear with betanuc values of 0.82 and 0.84, respectively, which supports the proposed mechanism. The Br?nsted-type plot for the reactions in H2O is also linear with betanuc = 0.52 which has been interpreted to indicate that the reaction proceeds through rate-limiting formation of a Meisenheimer complex. DNFB is more reactive toward secondary amines in MeCN than in H2O. The enhanced basicity of amines as well as the increased stability of the intermediate whose charges are delocalized through resonance are responsible for the enhanced reactivity in the aprotic solvent.     

Hydrolysis of 1-(X-substituted-benzoyl)-4-aminopyridinium ions: effect of substituent X on reactivity and reaction mechanism

A kinetic study is reported for hydrolysis of 1-(X-substituted-benzoyl)-4-aminopyridinium ions 2a-i, which were generated in situ from the nucleophilic substitution reaction of 2,4-dinitrophenyl X-substituted-benzoates 1a-i with 4-aminopyridine in 80 mol% H(2)O/20 mol% DMSO at 25.0 ± 0.1 °C. The plots of pseudo-first-order rate constants k(obsd) vs. pyridine concentration are linear with a large positive intercept, indicating that the hydrolysis of 2a-i proceeds through pyridine-catalyzed and uncatalyzed pathways with the rate constant k(cat) and k(o), respectively. The Hammett plots for k(cat) and k(o) consist of two intersecting straight lines, which might be taken as evidence for a change in the rate-determining step (RDS). However, it has been proposed that the nonlinear Hammett plots are not due to a change in the RDS but are caused by stabilization of 2a-i in the ground state through a resonance interaction between the π-electron-donor substituent X and the carbonyl functionality. This is because the corresponding Yukawa-Tsuno plots exhibit excellent linear correlations with ρ(X) = 1.45 and r = 0.76 for k(cat) while ρ(X) = 1.39 and r = 0.72 for k(o). A possibility that the hydrolysis of 2a-i proceeds through a concerted mechanism has been ruled out on the basis of the large ρ(X) values. Thus, the reaction has been concluded to proceed through a stepwise mechanism in which the leaving group departs after the RDS since OH(-) is more basic and a poorer nucleofuge than 4-aminopyridine.     

Electronic nature of substituent X governs reaction mechanism in aminolysis of 4-pyridyl X-substituted-benzoates in acetonitrile

A kinetic study is reported for aminolysis of 4-pyridyl X-substituted-benzoates 5a-i. Plots of pseudo-first-order rate constants (k(obsd)) vs [amine] curve upward for the reactions of substrates possessing a strong electron-withdrawing group in the benzoyl moiety (5a-d) but are linear for the reactions of those bearing an electron-donating group (5e-i), indicating that the electronic nature of substituent X governs the reaction mechanism. The k(1)k(2)/k(-1) and k(1)k(3)/k(-1) values were calculated from the intercept and slope of the linear plots of k(obsd)/[amine] vs [amine], respectively. The Hammett plot for k(1)k(2)/k(-1) consists of two intersecting straight lines, while the Yukawa-Tsuno plot exhibits an excellent linear correlation with ρ(X) = 0.41 and r = 1.58, implying that the nonlinear Hammett plot is not due to a change in rate-determining step but is caused by stabilization of substrates possessing an electron-donating group through resonance interactions. The small ρ(X) suggests that the k(2)/k(-1) ratio is little influenced by the nature of substituent X. The Br?nsted-type plots for aminolysis of 4-pyridyl 3,5-dinitrobenzoate 5a are linear with β(nuc) = 0.98 and 0.79 for k(1)k(2)/k(-1) and k(1)k(3)/k(-1), respectively. The effect of amine basicity on the microscopic rate constants is also discussed.     

Effect of amine nature on reaction mechanism: aminolyses of o-4-nitrophenyl thionobenzoate with primary and secondary amines

Pseudo-first-order rate constants (k(obs)) have been measured spectrophotometrically for reactions of O-4-nitrophenyl thionobenzoate (2) with a series of primary and acyclic secondary amines. The plots of k(obs) vs amine concentration are linear for the reaction of 2 with primary amines. The slope of the Br?nsted-type plot for the reaction of 2 with primary amines decreases from 0.77 to 0.17 as the amine basicity increases, indicating that the reaction proceeds through a zwitterionic addition intermediate in which the rate-determining step changes from the breakdown of the intermediate to the reaction products to the formation of the intermediate as the amine basicity increases. On the other hand, for reactions with all the acyclic secondary amines studied, the plot of k(obs) vs amine concentration exhibits an upward curvature, suggesting that the reaction proceeds through two intermediates, e.g., a zwitterionic addition intermediate and an anionic intermediate. The microscopic rate constants (k(1), k(-)(1), k(2), and k(3) where available) have been determined for the reactions of 2 with all the primary and secondary amines studied. The k(1) value is larger for the reaction with the primary amine than for the reaction with the isobasic acyclic secondary amines, while the k(-)(1) value is much larger for the latter reaction than for the former reaction. The k(3) value for the reaction with secondary amine is independent of the amine basicity. The small k(2)/k(-)(1) ratio is proposed to be responsible for the deprotonation process observed in aminolyses of carbonyl or thiocarbonyl derivatives.     

Solvolysis of 1,1-dimethyl-4-alkenyl chlorides: evidence for pi-participation

Tertiary 1,1-dimethyl-4-alkenyl chloride (1) solvolyzes with significantly reduced secondary beta-deuterium kinetic isotope effect (substrate with two trideuteromethyl groups) and has a lower entropy and enthalpy of activation than the referent saturated analogue 4 (k(H)/k(D) = 1.30 +/- 0.03 vs k(H)/k(D) = 1.79 +/- 0.01; Delta Delta H(++) = -9 kJ mol(-1), Delta Delta S(++) = -36 J mol(-1) K(-1), in 80% v/v aqueous ethanol), indicating participation of the double bond in the rate-determining step. Transition structure 1-TS computed at the MP2(fc)/6-31G(d) level of theory revealed that the reaction proceeds through a late transition state with considerably pronounced double bond participation and a substantially cleaved C-Cl bond. The doubly unsaturated compound 3 (1,1-dimethyl-4,8-alkadienyl chloride) solvolyzes with further reduction of the isotope effect, and a drastically lower entropy of activation (k(H)/k(D) = 1.14 +/- 0.01; DeltaS(++) = -152 +/- 12 J mol(-1) K(-1), in 80% v/v aqueous ethanol), suggesting that the solvolysis of 3 proceeds by way of extended pi-participation, i.e., the assistance of both double bonds in the rate-determining step.     

The hydrolysis process of the anticancer complex [ImH][trans-RuCl4(Im)2]: a theoretical study

A hydrolysis process of the anticancer drug [ImH][trans-RuCl4(Im)2] (ICR, Im=imidazole) has been investigated using density functional theory (DFT), and the aqueous solution effect has been considered and calculated by the conductor-like polarizable calculation model (CPCM). The stationary points on the potential energy surfaces for the first and second hydrolysis steps (including two different paths) were fully optimized and characterized. The results show that the computed values of free energy barriers DeltaG degrees (aq) and rate constants (k) in aqueous solution, in particular for the first hydrolysis step, are in excellent agreement with the experimental results. The analysis of electronic characteristics of species in the hydrolysis process suggests that the nucleophilic attack abilities (A) of hydrolysis products by biomolecular targets is in the sequence of A()相似文献   

Bimetallo-radical carbon-hydrogen bond activation of methanol and methane

Carbon-hydrogen bond cleavage reactions of CH3OH and CH4 by a dirhodium(II) diporphyrin complex with a m-xylyl tether (.Rh(m-xylyl)Rh.(1)) are reported. Kinetic-mechanistic studies show that the substrate reactions are bimolecular and occur through the use of two Rh(II) centers in the molecular unit of 1. Second-order rate constants (T = 296 K) for the reactions of 1 with methanol (k(CH3OH) = 1.45 x 10-2 M-1 s-1) and methane (k(CH4) = 0.105 M-1 s-1) show a clear kinetic preference for the methane activation process. The methanol and methane reactions with 1 have large kinetic isotope effects (k(CH3OH)/k(CD3OD) = 9.7 +/- 0.8, k(CH4)/k(CD4) = 10.8 +/- 1.0, T = 296 K), consistent with a rate-limiting step of C-H bond homolysis through a linear transition state. Activation parameters for reaction of 1 with methanol (DeltaH = 15.6 +/- 1.0 kcal mol-1; DeltaS = -14 +/- 5 cal K-1 mol-1) and methane (DeltaH = 9.8 +/- 0.5 kcal mol-1; DeltaS = -30 +/- 3 cal K-1 mol-1) are reported.     

Aminolysis of 4-nitrophenyl phenyl carbonate and thionocarbonate: effects of amine nature and modification of electrophilic center from C[double bond]O to C[double bond]S on reactivity and mechanism

A kinetic study is reported for the reactions of 4-nitrophenyl phenyl carbonate (5) and thionocarbonate (6) with a series of alicyclic secondary amines in 80 mol% H(2)O-20 mol% DMSO at 25.0 +/- 0.1 degrees C. The plots of k(obsd) vs. amine concentration are linear for the reactions of 5. On the contrary, the plots for the corresponding reactions of 6 curve upward as a function of increasing amine concentration, indicating that the reactions proceed through two intermediates (i.e., a zwitterionic tetrahedral intermediate T(+/-) and its deprotonated form T(-)). The Br?nsted-type plot for 5 the reactions of with secondary amines exhibits a downward curvature, i.e., the slope decreases from 0.98 to 0.26 as the pK(a) of the conjugate acid of amines increases, implying that the reactions proceed through T(+/-) with a change in the rate-determining step (RDS). The k(N) values are larger for the reactions of with secondary amines than for those with primary amines of similar basicity. Dissection of k(N) values for the reactions of 5 into the microscopic rate constants (i.e., k(1) and k(2)/k(-1) ratio) has revealed that k(1) is larger for the reactions with secondary amines than for those with isobasic primary amines, while the k(2)/k(-1) ratio is nearly identical. On the other hand, for reactions of 6, secondary amines exhibit larger k(1) values but smaller k(2)/k(-1) ratios than primary amines. The current study has shown that the reactivity and reaction mechanism are strongly influenced by the nature of amines (primary vs. secondary amines) and electrophilic centers (C[double bond]O vs. C[double bond]S).     

Kinetics and mechanism of the aminolysis of 4-methylphenyl and 4-chlorophenyl 4-nitrophenyl carbonates in aqueous ethanol

Reactions of 4-methylphenyl 4-nitrophenyl carbonate (MPNPC) and 4-chlorophenyl 4-nitrophenyl carbonate (ClPNPC) with a series of quinuclidines (QUIN) and the latter carbonate with a series of secondary alicyclic amines (SAA) are subjected to a kinetic investigation in 44 wt % ethanol-water, at 25.0 degrees C and an ionic strength of 0.2 M. The reactions were followed spectrophotometrically at 330 or 400 nm (4-nitrophenol or 4-nitrophenoxide anion appearance, respectively). Under excess amine, pseudo-first-order rate coefficients (k(obsd)) are found. For all these reactions, plots of k(obsd) vs free amine concentration at constant pH are linear, the slope (k(N)) being independent of pH. The Br?nsted-type plots (log k(N) vs pK(a) of the conjugate acids of the amines) for the reactions of the series of QUIN with MPNPC and ClPNPC are linear with slopes (beta(N)) 0.88 and 0.87, respectively, which are explained by a stepwise process where breakdown of a zwitterionic tetrahedral intermediate (T(+/-)) to products is rate limiting. The Br?nsted-type plot for the reactions of the series of SAA with ClPNPC is biphasic with slopes beta(1) = 0.2 (high pK(a) region) and beta(2) = 0.9 (low pK(a) region) and a curvature center at pK(a)(0) = 10.6. This plot is in accordance with a stepwise mechanism through T(+/-) and a change in the rate-determining step, from T(+/-) breakdown to T(+/-) formation as the basicity of the SAA increases. Two conclusions arise from these results: (i) QUIN are better leaving groups from T(+/-) than isobasic SAA, and (ii) the non-leaving group effect on k(N) for these reactions is small, since beta(nlg) ranges from -0.2 to - 0.3. From these values, it is deduced that ClPNPC is ca. 70% more reactive than MPNPC toward SAA and QUIN, when expulsion of the leaving group from T(+/-) is the rate determining step.     

Kinetic and mechanistic investigation of the aminolysis of 3-methoxyphenyl 3-nitrophenyl thionocarbonate, 3-chlorophenyl 3-nitrophenyl thionocarbonate,and bis(3-nitrophenyl) thionocarbonate

The reactions of the title thionocarbonates (6, 7, and 8, respectively) with a series of secondary alicyclic amines are subjected to a kinetic investigation in 44 wt % ethanol-water, 25.0 degrees C, ionic strength 0.2 M (KCl). Under excess amine, pseudo-first-order rate coefficients (k(obsd)) are obtained for all reactions. Reactions of substrates 6 and 7 with piperidine and of thionocarbonate 8 with the same amine and piperazine, 1-(2-hydroxyethyl)piperazine, and morpholine show linear k(obsd) vs [amine] plots, with slopes (k(1)) independent of pH. On the other hand, these plots are nonlinear upward for the reactions of substrates 6 and 7 with all the amines, except piperidine, and also for the reactions of compound 8 with 1-formylpiperazine and piperazinium ion. For all these reactions a mechanistic scheme is proposed with the formation of a zwitterionic tetrahedral intermediate (T(+/-)), which can transfer a proton to an amine to give an anionic intermediate (T(-)). Rate and equilibrium microcoefficients of this scheme, k(1), k(-)(1), K(1) (= k(1)/k(-)(1)), and k(2), are obtained by fitting the nonlinear plots through an equation derived from the scheme. The Br?nsted-type plots for k(1) are linear with slopes beta(1) = 0.19, 0.21, and 0.26 for the aminolysis of 6, 7, and 8, respectively. This is consistent with the hypothesis that the formation of T(+/-) (k(1) step) is the rate-determining step. The k(1) values for these reactions follow the sequence 8 > 7 > 6, consistent with the sequence of the electron-withdrawing effects from the substituents on the "nonleaving" group of the substrates. The k(1) values for the aminolysis of 6, 7, and 8 are smaller than those for the same aminolysis of 3-methoxyphenyl, 3-chlorophenyl, and 4-cyanophenyl 4-nitrophenyl thionocarbonates (2, 3, and 4, respectively). The k(2) values (expulsion of the nucleofuge from T(+/-)) increase as the electron withdrawal from the nonleaving group increases. These values are smaller for the aminolysis of 6, 7, and 8 compared to those for the same aminolysis of 2, 3, and 4, respectively.