Ring-rearrangement metathesis of substituted dihydropyrans and dihydrofurans

The rearrangement of dihydropyrans and dihydrofurans featuring appending olefins has been studied. The rearranged products bear resemblance with polyunsaturated di- and trisaccharides. Examples of functionalization prior to, or following, rearrangement are provided suggesting that the method should be useful for the synthesis of nonclassical saccharides. This work also illustrates the power of cascade methatetic processes for increasing molecular complexity starting from relatively simple heterocycles.     

Relative thermodynamic stabilities of isomeric 1,2-dialkoxyethenes

The relative thermodynamic stabilities of the geometrical isomers of a number of 1,2-dialkoxyethenes have been determined by chemical equilibration in the neat liquid and in 1,4-dioxane solution with mercuric acetate as catalyst. From the variation of the value of the equilibrium constant with temperature, the thermodynamic parameters G , H , and S of theE Z isomerization were evaluated. In all cases theZ isomer proved to be thermodynamically the more stable species, its favor increasing with the bulkiness of the alkoxy groups. The thermodynamic data obtained for theEZ isomerization of 1,2-dimethoxyethene differ significantly from those reported in the literature. An attempt to correlate the experimental thermodynamic data with MM2 calculations for the title compounds as well as for 1,2-dimethoxypropenes is presented.     

Relative thermodynamic stabilities of allyl vinyl and propenyl vinyl ethers

The relative thermodynamic stabilities of a number of isomeric allyl vinyl and propenyl vinyl ethers were determined by chemical equilibration in DMSO solution with KOBu-t as catalyst. From the temperature dependence of the values of the equilibrium constant the parameters G _m , H _m and S _m of isomerization at 298.15 K were evaluated. Propenyl vinyl ethers, owing to their low enthalpy contents, are much more stable than the isomeric allyl vinyl ethers. It appears that in the parent propenyl vinyl ether, the Me group attached to C- of the divinyl ether skeleton has a strong stabilizing effect, comparable to that of alkyl groups in ordinary olefins, on the unsaturated system. In more heavily alkyl-substituted divinyl ethers, however, the stabilizing effects of alkyl groups are less prominent, being comparable to the low stabilization energies of alkyl groups in vinyl ethers, and depend moreover, on the pattern of substitution.     

Relative thermodynamic stabilities of 2-substituted 4-methylene-1,3-dioxolanes and 4-methyl-1,3-dioxoles

The relative thermodynamic stabilities of 24 pairs of carbon-carbon double-bondexo-endo isomeric 2-substituted 4-methylene-1,3-dioxolanes (a) and 4-methyl-1,3-dioxoles (b) have been determined by base-catalyzed chemical equilibration in DMSO solution. In all cases, theendo isomer (b) is the favored species at thermodynamic equilibrium. A single alkyl substitutent on C-2 gives only a negligible contribution to the relative stability of the isomeric forms, but the presence of two alkyl groups on C-2 increases the relative stability of theendo isomer by 2–3 kL mol^–1. A still higher effect in favor of theendo isomer is produced by introduction of a single alkoxy group on C-2; this effect is further slightly accentuated by 2,2-dialkoxy substitution at C-2. The origin of the favorable effect of 2-alkoxy substitution on the relative stability of theendo isomer is not clear, but it seems to arise from an unexpected stability of theendo isomer rather than from an enhanced destabilization of theexo form.     

Relative Stabilities and Molecular Structures of Isomeric Dihalobenzenes. A DFT Study

The molecular structures, total energies, and other computational data of benzene, and its monoand dihalogenated derivatives (halogen = F, Cl, Br) have been studied by DFT calculations. The main aim of the study was to estimate the relative stabilities (energies) of the ortho, meta, and para isomers of the six series of dihalobenzenes investigated. The computational data show that the ortho isomers always have the highest, and the meta isomers usually, but not always, the lowest total energies. Thus, 1,2-difluorobenzene is ca. 16.6 kJ mol^–1, and 1,4-difluorobenzene 2.5 kJ mol^–1 less stable than 1,3-difluorobenzene. Among the other isomeric dihalobenzenes, the differences in stability are less pronounced. For the dibromo-, dichloro-, and bromochlorobenzenes, the para compounds are calculated to be slightly (0.2–0.4 kJ mol^–1) more stable than their meta isomers. In addition to the thermochemical aspect of the study, the computational molecular structures of the halobenzenes are compared with available experimental data and discussed in terms of the substituent-induced deformation of the ideal geometry of the benzene ring. The computational electric dipole moments, especially for the fluorine-containing compounds, compare favorably with the respective experimental (gas-phase) values.     

A DFT study of the polar Diels-Alder reaction between 4-aza-6-nitrobenzofuroxan and cyclopentadiene

The polar Diels-Alder reaction between 4-aza-6-nitrobenzofuroxan (ANBF) and cyclopentadiene has been studied using DFT procedures at the B3LYP/6-31G* level. Only one highly asynchronous transition state structure associated to the formation of the [4+2] adduct 13 is found. A further [3,3] sigmatropic shift on the [4+2] cycloadduct 13 allows its conversion into the thermodynamically more stable [2+4] cycloadduct 14. The analysis of the global and local electrophilicities of the reagents correctly explain the behaviour of ANBF as a strong electrophile in polar cycloadditions.     

A DFT study on pyridine-derived N-heterocyclic carbenes

To appreciate the chemistry of N-heterocyclic carbenes (NHCs), eight carbenic tautomers of pyridine (azacyclohexadienylidenes) are studied at B3LYP/AUG-cc-pVTZ//B3LYP/6-31+G^∗ and B3LYP/6-311++G^∗∗//B3LYP/6-31+G^∗ levels of theory. Various thermodynamic parameters are calculated for these minima, along with a kinetic focus on carbene-pyridine tautomerization. Appropriate isodesmic reactions show stabilization energies of 2-azacyclohexa-3,5-dienylidene (1) and 4-azacyclohexa-2,5-dienylidene (6) as 119.4 and 104.1 kcal/mol, rather close to that of the synthesized 1,3-dimethylimidazol-2-ylidene (129.2 kcal/mol). Three different mechanisms are suggested for the tautomerizations including: [1,2]-H shift, [1,4]-H shift, and three sequential [1,2]-H shifts. The calculated energy barrier for [1,2]-H shift of 1 is 44.6 kcal/mol, while the first [1,2]-H shift for the proposed sequential mechanism of 6 requires 65.1 kcal/mol. Three preliminary minimum templates are introduced, which may possess the potential of synthetic consideration: 2,6-di(X)-3,5-dichloro-4-azacyclohexa-2,5-dienylidene for X=Mes, t-Bu, and Ad.     

Mechanism and origin of diastereoselectivity of N-heterocyclic carbene-catalyzed cross-benzoin reaction: A DFT study

Herein,the origin of the diastereoselectivity of N-heterocyclic carbene(NHC)-catalyzed cross-benzoin reactions between an a-amino aldehyde and furfural was studied by density functional theory.The computational results showed that the reaction proceeded through four steps:nucleophilic addition of NHC onto furfural,formation of a Breslow intermediate,cross-coupling reaction between Breslow intermediate and a-amino alde hyde,and dissociation of the catalyst.The cross-coupling was identified as the diaste reoselectivity-determining step,with the R-configured product generated preferentially.Noncovalent inte raction(NCI)analysis showed that the C-H…O and C-H…F inte ractions were responsible for determining the diastereoselectivity.     

A DFT study of the origins of the stereoselectivity in the aldol reaction of bicyclic amino ketones in the presence of water

Experimental diastereoselectivities of the direct solvent-less (neat) aldol reactions of tropinone (8-methyl-8-azabicyclo[3.2.1]octan-3-one) and granatanone (pseudopelletierine, 9-methyl-9-azabicyclo[3.3.1]nonan-3-one) in the presence of catalytic amounts of water are most accurately reproduced by thermodynamic distributions of isomeric products calculated in the gas phase at the B3LYP/6-31g(d) level of theory. Less than 30% systematic errors, on average, exist in the predicted anti/syn-diastereomeric ratio (dr) for the solvent-less reaction of tropinone with several aromatic aldehydes. The CPCM-B3LYP/6-31g(d) method reproduces the anti/syn-diastereomeric ratio of the aqueous aldol reaction of tropinone with several aromatic aldehydes with reasonable deviation (0-88%), excellent (0-10)% agreement was found for the reactions of tropinone and granatanone with benzaldehyde. Qualitatively satisfactory agreement was also found for dr values in different solvents (DMF, THF, and Et₃N). The density functional theory (DFT) results support the notion of the thermodynamic control of the reaction.     

Relative Stabilities of the Geometrical and Conformational Isomers of 2-Alkylideneoxacycloalkanes. A DFT Study

The relative stabilities of the geometrical and rotational isomers of 2-alkylideneoxacycloalkanes (-oxiranes, -oxetanes, -tetrahydrofurans, and -tetrahydropyrans; alkyl = Et, Pr, i-Bu, 2,2-dimethylpropyl) have been studied by DFT calculations. Independent of the size of the alkyl group, the E and Z isomers of alkylideneoxiranes have almost comparable stabilities (the Z form, however, being slightly favored), but, with increasing size of the heterocyclic ring, the relative stability of the E isomer decreases. This is particularly prominent for the tetrahydropyran derivatives with alkyl = 2,2-dimethylpropyl, in which marked repulsive interactions between the t-Bu group and the 3-CH₂ group of the tetrahydropyran ring make the E form, ca. 13 kJ mol^–1 less stable than the Z isomer. On the other hand, for alkyl = Et, Pr, and i-Bu, the relative stabilities of the geometrical isomers are almost independent of the alkyl group. Besides the relative stabilities of the geometrical isomers, energetics of the rotational isomerism of the alkyl group about the C(sp ³)—C(sp ²) bond is also surveyed.     

Relative Thermodynamic Stabilities of Isomeric Vinyl Ethers Derived from 2-Acetyland 2-Isobutyryltetrahydrofurans. An Experimental and DFT Study

The relative thermodynamic stabilities of four isomeric vinyl ethers obtained by acid-catalyzed cleavage of MeOH from the dimethyl acetals of both 2-acetyltetrahydrofuran and 2-isobutyryltetrahydrofuran have been determined by chemical equilibration in cyclohexane solution. In addition, the structures and relative energies of many of these compounds have also been studied theoretically by DFT calculations. In each series of compounds, the endocyclic isomers, 5-(1-methoxyethyl)-2,3-dihydrofuran and 5-(1-methoxy-2-methylpropyl)-2,3-dihydrofuran, respectively, show the highest thermodynamic stabilities. This is particularly prominent for the vinyl ethers derived from 2-isobutyryltetrahydrofuran in which the equilibrium mixture consists of 90% of the endocyclic isomer at room temperature. The geometrical (exocyclic) isomers of the latter series of compounds show unexpected relative thermodynamic stabilities, but on the basis of the geometry-optimized structures provided by the DFT calculations, a reasonable explanation can be found.     

DFT study on the effects of substituents on the structure and properties of dithiophosphate collectors

The structures and properties of seven substituted dithiophosphate (DTP) collectors containing three types of functional groups (O₂PS₂, C₂PS₂, and N₂PS₂) were studied using density functional theory. The collectors studied were dibutyl dithiophosphate (DNBDTP), diisobutyl dithiophosphate (DIBDTP), dibutoxyethyl dithiophosphate (DBOEDTP), xylenol dithiophosphate (DMPDTP), diisobutyl dithiohypophosphite (3418A), diphenylamine dithiophosphate (DTADTP), and dicyclohexylamine dithiophosphate (DCADTP). The structural analysis showed that the P S bond lengths in the C₂PS₂ and N₂PS₂ types are longer than those in the O₂PS₂ type, indicating that the strength of the P S bond is weaker in the former two. The frontier molecular orbital studies showed that the energy differences between the highest occupied molecular orbitals (HOMO) of 3418A (C₂PS₂ type) and DCADTP (N₂PS₂ type) and the lowest unoccupied molecular orbital (LUMO) of galena are significantly lower than those of the other collectors, suggesting that C₂PS₂ type and N₂PS₂ type with cyclohexane could enhance the interaction with galena. Using the Fukui function to calculate the nucleophilicity and electrophilicity of the sulfur atom indicated that the S atom exhibits nucleophilicity, especially in DMPDTP and DTADTP, which contain benzene rings, and the S atom exhibits strong nucleophilicity without electrophilicity. However, due to the lack of contribution from S atoms to the LUMO orbitals, the S atoms in these two compounds are not participate in any LUMO reactions. The adsorption results demonstrated that 3418A (C₂PS₂ type) and DCADTP (N₂PS₂ type) exhibit the strongest adsorption on Pb²⁺ ions, while DMPDTP (C₂PS₂ type) and DTADTP (O₂PS₂ type) which contain benzene rings, as well as DBOEDTP (C₂PS₂ type) which does not contain a benzene ring, exhibit weaker interaction compared to the other compounds. These are consistent with the results of the frontier molecular orbital and electrophilic nucleophilicity calculations.     

A DFT study of the hydrolysis of hydantoin

Density functional theory (DFT) calculations were made on the hydrolysis of hydantoin (2,4-imidazolidinedione). In the neutral hydrolysis, reacting systems composed of hydantoin and (H₂O)_n with n = 1+3, 2+3, 3+3, and 4+3 were adopted. Three water molecules (“+3”) participate in the in-plane hydrogen-bond circuit, and the n–3 = 1, 2, 3 or 4 water cluster works for the out-of-plane nucleophilic attack onto the carbonyl carbon of hydantoin. Transition states (TSs) involving bond interchanges prompted by proton transfers were determined. The reaction path with n = 3+3 containing N-carbamoyl glycine, N-carboxy glycine and three tetrahedral intermediates was found to be most likely. In the acid-catalyzed hydrolysis, a reacting system composed of hydantoin and H₃O⁺(H₂O)₇ was employed. Ten TSs and nine intermediates were obtained. N-carbamoyl glycine and N-carboxy glycine were confirmed to be detectable stable species. The product consists of glycine, carbonic acid (not CO₂), NH₄⁺, and (H₂O)₅. It has the exothermic energy, whereas the product in the neutral hydrolysis is of the endothermic one for all n values. For both neutral (n = 3+3) and acid-catalyzed hydrolyses, the rate-determining steps were calculated to be for formation of the tetrahedral intermediate, HOOC-CH₂-NH-C(OH)₂NH₂. The pattern of proton transfers along hydrogen bonds was carefully investigated.     

Regio- and diastereoselectivity of the cycloaddition of aldonitrones with benzylidenecyclopropane: An experimental and theoretical study

1,3-Dipolar cycloaddition of benzylidenecyclopropane with various aldonitrones proceeds regioselectively giving good yields of 4-spirocyclopropane isoxazolidines. In the case of aldonitrones, bearing carbamoyl- or aryl-groups on the carbon atom, only the cis-isomer is formed. The compounds synthesized were tested for their virus-inhibiting activity.     

Relative Thermodynamic Stabilities of Isomeric Dimethyl Acetals Derived from 2-Acetyltetrahydrofuran. An Experimental and Computational Study

In the presence of an acid catalyst, the dimethyl acetal of 2-acetyltetrahydrofuran (1) is converted into a mixture of three isomeric acetals composed of the reactant and two diastereomers of 2-methoxy-2-(1-methoxyethyl)tetrahydrofuran (2). The relative thermodynamic stabilities of these acetals have now been determined by chemical equilibration. The least stable isomer is 1, in the liquid phase 4–6 kJ mol^–1 less stable than the two diastereomers. The geometry-optimized structures and relative energies of the title compounds were also studied by theoretical calculations (ab initio and DFT). Comparison of the theoretically determined relative stabilities of the diastereomers with the corresponding experimental data suggests the more volatile (and more stable) diastereomer to exist as a racemic mixture of the (R,S) and (S,R) configurations.     

Density functional study of the l-proline-catalyzed α-aminoxylation of aldehydes reaction: The reaction mechanism and selectivity

The reaction mechanism of the l-proline-catalyzed α-aminoxylation reaction between aldehyde and nitrosobenzene has been investigated using density functional theory (DFT) calculation. Our calculation results reveal following conclusions [1]. The first step that corresponds to the formation of C–O bond, is the stereocontrolling and rate-determining step [2]. Among four reaction channels, the syn-attack reaction channel is more favorable than that of the anti one, and the TS-ss channel dominates among the four channels for this reaction in the step of C–O bond formation [3]. The intermolecular hydrogen bond between the acidic hydrogen of l-proline and the N atom of the nitrosobenzene in an early stage of the process catalyzes very effectively the C–O bond formation by a large stabilization of the negative charge that is developing at the O atom along the electrophilic attack [4]. The effect of solvent decreases the activation energy, and also, the calculated energy barriers are decrease with the enhancement of dielectric constants for C–O bond formation step. These results are in good agreement with experiment, and allow us to explain the origin of the catalysis and stereoselectivity for l-proline-catalyzed α-aminoxylation of aldehyde reaction. The addition of H₂O to substituted imine proline, intermolecular proton-transfer steps, and the l-proline elimination process were also studied in this paper.     

A 45Sc-NMR and DFT calculation study of crystalline scandium compounds

A series of scandium compounds, namely ScPO₄, ScOF, Li₃Sc(BO₃)₂, and CaSc₂O₄, were prepared according to procedures described in the literature, and then characterised by powder X-ray diffraction and solid-state ⁴⁵Sc-NMR spectroscopy. By computer fitting, the quadrupolar interaction parameters χ and η, as well as the isotropic chemical shifts δ_iso were extracted from the NMR spectra. For comparison and site assignment of ⁴⁵Sc, density functional theory (DFT) calculations of the EFG tensor were carried out with the Castep code. For the compounds with a well-defined formal coordination number (CN), a convincing linear correlation between CN and isotropic chemical shift could be established.     

Lateral substituent effects on UV stability of high-birefringence liquid crystals with the diaryl-diacetylene core: DFT/TD-DFT study

To study the effect of the lateral substituents on the UV stability of high birefringence liquid crystals (LCs), computational chemistry was used to examine a series of high birefringence LCs based on a diphenyl-diacetylene (DPDA) central core, thiophene segments as elongated π-conjugated units and four electron-withdrawing groups (-F, -CF₃, -OCF₃, -CN) as lateral substituents. In the present study, geometry optimisations have been performed using the DFT/B3LYP/6-311G (d, p) method. Out of a series of functional and basis sets examined, the functional ωB97X-D and basis set 6-31G (d, p) are most successful in predicting charge transfer absorption. The theoretical study indicates that the enhancement of UV stability is related with the types, numbers and positions of the lateral substituents. The calculated results indicate that the electron-withdrawing groups can shorten triple bond length, decrease energy gap value and increase the absorption maxima of the high-Δn LCs, which is beneficial for good UV stability. With the introduction of increasing lateral electron-withdrawing substituent numbers, the DPDA derivatives would further improve UV stability. This work may provide an effective solution for the obstacle existed in the high-Δn LCs with DPDA structures and pave a way for their applications in LC photonics.