Single-molecule conductance of redox molecules in electrochemical scanning tunneling microscopy

Experimental data and theoretical notions are presented for 6-[1'-(6-mercapto-hexyl)-[4,4']bipyridinium]-hexane-1-thiol iodide (6V6) "wired" between a gold electrode surface and tip in an in situ scanning tunneling microscopy configuration. The viologen group can be used to "gate" charge transport across the molecular bridge through control of the electrochemical potential and consequently the redox state of the viologen moiety. This gating is theoretically considered within the framework of superexchange and coherent two-step notions for charge transport. It is shown here that the absence of a maximum in the Itunneling versus electrode potential relationship can be fitted by a "soft" gating concept. This arises from large configurational fluctuations of the molecular bridge linked to the gold contacts by flexible chains. This view is incorporated in a formalism that is well-suited for data analysis and reproduces in all important respects the 6V6 data for physically sound values of the appropriate parameters. This study demonstrates that fluctuations of isolated configurationally "soft" molecules can dominate charge transport patterns and that theoretical frameworks for compact monolayers may not be directly applied under such circumstances.     

Determination of relative binding affinities of labeling molecules with amino acids by using scanning tunneling microscopy

The binding behaviour of labeling molecule copper phthalocyanine tetrasulfonate sodium (PcCu(SO(3)Na)(4)) on the assemblies of representative polyamino acids has been studied by using scanning tunneling microscopy (STM). By directly visualizing the adsorption and distribution of the labeling species on the peptide assemblies in STM images, one could obtain relative binding affinities of the labeling molecule with different amino acid residues.     

Optoeletronic investigation of Cu2ZnSn(S,Se)4 thin-films & Cu2ZnSn(S,Se)4/CdS interface with scanning probe microscopy

The kesterite-structured semiconductor Cu₂ZnSn(S,Se)₄ (CZTSSe) is prepared by spin coating a non-hydrazine precursor and annealing at Se atmosphere. Local electrical and optoelectronic properties of the CZTSSe thin-film are explored by Kelvin probe force microscopy and conductive atomic force microscopy. Before and after irradiation, no marked potential bending and very low current flow are observed at GBs, suggesting that GBs behave as a charge recombination site and an obstacle for charge transport. Furthermore, CdS nano-islands are synthesized via successive ionic layer adsorption and reaction (SILAR) method on the surface of CZTSSe. By comparing the work function and current flow change of CZTSSe and CdS in dark and under illumination, we demonstrate photo-induced electrons and holes are separated at the interface of p-n junction and transferred in CdS and CZTSSe, respectively.     

Measuring the ionic flux of an electrochemically actuated conducting polymer using modified scanning ion conductance microscopy

We propose a modification of a scanning ion conductance microscope suitable for probing an electrode in an operating electrochemical cell. We demonstrate its use by measuring salt concentration variations near a conducting polymer electrode as the polymer is electrochemically oxidized and reduced. The electrochemical control circuit is opened to isolate the working electrode, at a frequency sufficiently high that the electrode capacitance maintains the electrode potential. The local solution conductivity variations are detected through the probe current during the open-circuit time. We demonstrate two-stage ion exchange during oxidation and reduction of poly(3,4-ethylenedioxythiophene) films that develops strongly with repeated cycling and is correlated with actuation changes. Spatial composition variations of the film, caused by redox current distribution over the surface, and electromigration to the probe tip, causing local solution composition changes, have clear and characteristic effects on the measured transients.     

Bridging the pressure gap in model systems for heterogeneous catalysis with high-pressure scanning tunneling microscopy

A high-pressure scanning tunneling microscope (HP-STM) enabling imaging with atomic resolution over the entire pressure range from ultrahigh vacuum (UHV) to one bar has been developed. By means of this HP-STM we have studied the adsorption of hydrogen on Cu(110), CO on Pt(110) and Pt(111), and NO on Pd(111) at high pressures. For all of these adsorption systems we find that the adsorption structures formed at high pressures are identical to high-coverage structures formed at lower pressures and temperatures. We thus conclude that for these systems the so-called pressure gap can be bridged, i.e. the results obtained under conventional surface science conditions can be extrapolated to higher pressures. Finally, we use the HP-STM to image the CO-induced phase separation of a Au/Ni(111) surface alloy in real time, whereby demonstrating the importance of catalyst stability in the study of bimetallic systems.     

Quantitative determination of the single-molecule detection regime in fluorescence fluctuation microscopy by means of photon counting histogram analysis

Fluorescence fluctuation experiments are performed in single-molecule detection regime if the fluorescence of at most one molecule is registered at a time. Although the significance of such experiments for investigations of complex nonergodic systems like those met in the biosciences has been stressed out by many scientists, the quantitative and accurate determination of the single-molecule detection regime received rather little attention. In this work we present a method based on the photon counting histogram (PCH) analysis, which enables the determination of the average number N of molecules within the observation volume, for which only the fluorescence of individual molecules is detected at a time. Thus, the accurate design of fluorescence fluctuation experiments performed in single-molecule detection regime is possible. Demonstrative fluorescence fluctuation experiments based on two-photon excitation are performed on diluted solutions of coumarin 153, in order to verify the potential of the PCH analysis in experiments on the single-molecule detection level. If the mean number N of molecules within the excitation volume is larger than 0.048, the probability to simultaneously detect the fluorescence of two or more molecules is no longer negligible, i.e., no single-molecule detection regime. If the mean number N of molecules is lower than 0.0057, the detection limit of the method is reached, i.e., the fluorescence signal cannot be distinguished from the background. Consequently, the concentration of coumarin 153 characteristic for the single-molecule detection regime lies in the range 13-110 pmol/l for the given experimental conditions. We also investigate the influence of the molecular brightness, i.e., detected photons per fluorophore molecule and sampling time, on the single-molecule detection regime.     

The reorganization energy of azurin in bulk solution and in the electrochemical scanning tunneling microscopy setup

The total reorganization energy lambda of azurin is theoretically studied both for the electron self-exchange reaction and for the protein in the electrochemical scanning tunneling microscopy (ECSTM) setup. The results demonstrate the importance of the proximity between the active sites in the encounter complex to reduce lambda for the electron self-exchange reaction and quantifies the effects of the presence of an STM environment (tip and substrate) on lambda. A comparison of the calculated results with experimental data is performed, and the relative magnitudes of the inner and outer contributions to lambda are discussed.     

Dynamics in physisorbed monolayers of 5-alkoxy-isophthalic acid derivatives at the liquid/solid interface investigated by scanning tunneling microscopy

Monolayers of isophthalic acid derivatives at the liquid/solid interface have been studied with scanning tunneling microscopy (STM). We have investigated the dynamics related to the phenomenon of solvent co-deposition, which was previously observed by our research group when using octan-1-ol or undecan-1-ol as solvents for 5-alkoxy-isophthalic acid derivatives. This solvent co-deposition has now been visualized in real-time (two frames per second) for the first time. Dynamics of individual molecules were investigated in mixtures of semi-fluorinated molecules with video-STM. The specific contrast arising from fluorine atoms in STM images allows us to use this functionality as a probe to analyze the data obtained for the mixtures under investigation. Upon imaging the same region of a monolayer for a period of time we observed that non-fluorinated molecules progressively substitute the fluorinated molecules. These findings illustrate the metastable equilibrium that exists at the liquid/solid interface, between the physisorbed molecules and the supernatant solution.     

Electron spectroscopy and scanning tunneling microscopy study of quasi-two-dimensional freezing at the liquid/vapor interface of Ga-Bi alloys

We have studied the interfacial characteristics of Ga-rich liquid Ga-Bi alloys at various compositions and temperatures up to 300 degrees C by different electron spectroscopies under ultrahigh vacuum conditions. In particular, the thickness and thickness profiles of Bi-rich wetting and surface freezing films have been measured. It is found that at the surface freezing transition the Bi film thickness jumps from approximately 5 A to macroscopic values of over 100 A. This distinct behavior is discussed in comparison with the results in Ga-Pb. In addition, we report first scanning tunneling microscopy observations of the surface structure of a solidified Ga(0.989)Bi(0.011) alloy after passing a surface freezing transition. The topology at room temperature is characterized by extended, atomically flat Bi terraces covered by nanosized triangular two-dimensional Bi islands.     

Significance of local density of states in the scanning tunneling microscopy imaging of alkanethiol self-assembled monolayers

A systematic scanning tunneling microscopy (STM) study of alkanethiol self-assembled monolayers (SAMs) is presented as a function of the bias voltage, tunneling current, and tip-termini separation. Stable and etch-pit free SAMs of close-packed undecanethiol/Au(111) were obtained after annealing in ultrahigh vacuum. STM revealed two distinct c(4x2) structures with four nonequivalent molecules per unit cell. For both structures, reversible contrast variations occur upon systematically tuning the bias voltage, the current, and the tip-termini distance. These contrast transitions originate from probing the corresponding local density of states (LDOS) of each molecule and not from the reorientation of the alkanethiol chains. The STM contrast is particularly sensitive to the tip-termini separation in the range of 0.5-2.5 A, reflecting the distance-dependence of LDOS. At a fixed tip elevation, the STM contrast is less sensitive to changes in bias within 0.1-1.2 V. For the first time, we demonstrate that LDOS may override the physical height variations in the STM topographic contrast for alkanethiol SAM systems.     

Light-induced structural transformation in self-assembled monolayer of 4-(amyloxy)cinnamic acid investigated with scanning tunneling microscopy

UV light irradiation effect on the structural transformation in a self-assembled monolayer of 4-(amyloxy)cinnamic acid (AOCA) on Au(111) has been investigated by using electrochemical scanning tunneling microscopy (ECSTM), cyclic voltammetry, and infrared (IR) spectroscopy. A well-defined 4-(amyloxy)cinnamic acid adlayer with a (4 x 11) symmetry was first prepared on Au(111). After UV-light irradiation onto the adlayer, a new adlayer is observed with different molecular arrangement and a symmetry of (5 x 8). On the basis of the results from high-resolution STM image and photochemical reaction, a dimerizaion of AOCA molecules in the adlayer with structural transformation is concluded. Schematic models have been proposed for the unirradiated and irradiated adlayers, respectively. The direct evidence at molecular level about photodimerization of cinnamic acid on metal substrate is presented.     

Quantitative determination of surface energy using atomic force microscopy: the case of hydrophobic/hydrophobic contact and hydrophilic/hydrophilic contact

Atomic force microscopy (AFM) has been used to determine the surface energy of chemically modified surfaces at a local scale. In order to achieve this aim, it was necessary to graft both the AFM tip and the substrate with the same chemical functional groups. Two different organothiols terminated either by hydrophilic or hydrophobic chemical functionalities were used. Grafting process classically reported shows that after UV/ozone treatment for 30 min, the tip is coated by thermal deposition with 4‐5‐nm‐thick titanium layer followed by a 30‐nm‐thick gold layer. Finally, the tip is grafted by organothiols. The thickness of the layer deposited on the tip is of the same order of magnitude as the tip radius. To avoid the use of Ti and to decrease the thickness of the gold layer, we have developed a new way of grafting by using organic molecules like (3‐mercaptopropyl)triethoxysilane (MPS) as a linkage agent. Then this way of grafting was checked. Finally, AFM force‐distance curves, between grafted tips and chemically modified surface, were carried out in contact mode. Calibration of the various parts of the apparatus and especially of the cantilever (spring constant and tip radius) is of major importance to reach quantitative data. Finally, by applying a suitable theory of contact, we were able to determine the surface energy of our system. Copyright © 2005 John Wiley & Sons, Ltd.     

Determination of the surface anchoring potential of a nematic in contact with a substrate

We have developed a method for determining the surface anchoring potential for nematics in contact with a substrate that provides director alignment. Our main result is that the surface torque and hence the anchoring potential may be determined from either dielectric or optical phase response of a nematic undergoing a Freedericksz transition. The method is based on the Frank-Oseen continuum theory, and makes no assumptions about the functional form of the potential. We have measured the surface anchoring potential of two types of substrate in contact with the nematic liquid crystal 4-n-pentyl-4′-cyanobiphenyl. The surfaces were ITO-coated float glass, coated either with obliquely evaporated SiO or a buffed polymer film. Comparison of the results obtained from capacitance and optical measurements provides an estimate of the goodness of the method.     

Mercury adsorption on gold surfaces employed in the sampling and determination of vaporous mercury: a scanning tunneling microscopy study

To clarify the mechanism of mercury adsorption on gold surfaces thin epitaxial gold films have been exposed to trace amounts of gaseous mercury under laboratory conditions for different periods of time. The changes in the surface morphology of the thin films caused by the exposure have been studied by scanning tunneling microscopy (STM). The evolution of the surface structures with time has been also investigated, in the course of a few days after the exposure. The adsorption of mercury on the gold surfaces has caused drastic changes in the morphology of the surfaces. Pits and islands of 2 to 30 nm in diameter have appeared on the surface, their size and density per unit area depending on the amount of exposure to mercury. The formation of pits and islands followed a certain path of events.     

Mercury adsorption on gold surfaces employed in the sampling and determination of vaporous mercury: a scanning tunneling microscopy study

To clarify the mechanism of mercury adsorption on gold surfaces thin epitaxial gold films have been exposed to trace amounts of gaseous mercury under laboratory conditions for different periods of time. The changes in the surface morphology of the thin films caused by the exposure have been studied by scanning tunneling microscopy (STM). The evolution of the surface structures with time has been also investigated, in the course of a few days after the exposure. The adsorption of mercury on the gold surfaces has caused drastic changes in the morphology of the surfaces. Pits and islands of 2 to 30 nm in diameter have appeared on the surface, their size and density per unit area depending on the amount of exposure to mercury. The formation of pits and islands followed a certain path of events.     

Elucidation of the deposition processes and spatial structures of alkanethiol and arylthiol molecules adsorbed on Pt111 electrodes with in situ scanning tunneling microscopy

In situ scanning tunneling microscopy (STM) was used to examine the spatial structures of n-alkane thiols (1-hexanethiol, 1-nonanethiol, and 1-octahexanethiol) and arylthiols (benzenethiol and 4-hydroxybenzenethiol) adsorbed on well-ordered Pt111 electrodes in 0.1 M HClO4. The electrochemical potential and molecular flux were found to be the dominant factors in determining the growth mechanisms, final coverages, and spatial structures of these organic adlayers. Depending on the concentrations of the thiols, deposition of self-assembled monolayers (SAMs) followed either the nucleation-and-growth mechanism or the random fill-in mechanism. Low and high thiol concentrations respectively produced two ordered structures, (2 x 2) and (square root of 3 x square root of 3)R30 degrees , between 0.05 and 0.3 V. On average, an ordered domain spanned 500 A when the SAMs were made at 0.15 V, but this dimension shrank substantially once the potential was raised above 0.3 V. This potential-induced order-to-disorder phase transition resulted from a continuous deposition of thiols, preferentially at domain boundaries of (square root of 3 x square root of 3 x )R30 degrees arrays. All molecular adlayers were completely disordered by 0.6 V, and this restructuring event was irreversible with potential modulation. Since all thiols were arranged in a manner similar to that adopted by sulfur adatoms (Sung et al. J. Am. Chem. Soc. 1997, 119, 194), it is likely that they were adsorbed mainly through their sulfur headgroups in a tilted configuration, irrespective of the coverage. Both the sulfur and phenyl groups of benzenethiol admolecules gave rise to features with different corrugation heights in the molecular-resolution STM images. All thiols were adsorbed strongly enough that they remained intact at a potential as negative as -1.0 V in 0.1 M KOH.     

扫描电镜-能谱法测定生活饮用水中石棉

建立了扫描电镜-能谱法(SEM-EDS)测定生活饮用水中石棉(≥10μm)的方法,使用场发射扫描电镜可对宽度大于0.050~0.124μm的石棉纤维进行定性和计数。若生活饮用水中存在以藻类为主的有机质干扰,使用紫外-过硫酸钾消解可消除相应干扰。配置低、中、高3个浓度的石棉悬浊液模拟水样交由国内不同地区的6家实验室进行方法学验证,结果表明,方法实验室内RSD为10%~37%,实验室间RSD为10%~39%,蓝藻干扰消除实验回收率平均值为98.1%,RSD为11%。方法检出限为5.0×10^4~11.6×10^4个/L,低于GB 5749限量规定的700×10^4个/L。     

Understanding the contrast mechanism in scanning tunneling microscopy (STM) images of an intermixed tetraphenylporphyrin layer on Ag(111)

The appearance of tetraphenylporphyrins in scanning tunneling micrographs depends strongly on the applied bias voltage. Here, we report the observation and identification of certain features in scanning tunneling microscopy (STM) images of intermixed layers of tetraphenylporphyrin (2HTPP) and cobalt-tetraphenylporphyrin (CoTPP) on Ag(111). A significant fraction of an ordered monolayer of commercially available CoTPP appears as "pits" at negative bias voltages around -1 V. The obvious possibility that these pits are missing molecules within the ordered layer could be ruled out by imaging the molecules at reduced bias voltages, at which the contrast of the pits fades, and at positive bias voltages around +1 V, at which the image contrast is inverted. With the investigation of the electronic structure, in particular the density of states (DOS) close to the Fermi level, of CoTPP and 2HTPP layers by means of ultraviolet photoelectron spectroscopy (UPS) and scanning tunneling spectroscopy (STS), the contrast mechanism was clarified. The correlation of the bias dependent contrast with the UPS data enabled us to interpret the "pits" as individual 2HTPP molecules. Additional evidence could be provided by imaging layers of different mixtures of 2HTPP and CoTPP and by high-resolution STM imaging of the features in CoTPP.     

Investigation on the surface orientation of cylindrical microdomains in styrene-butadiene-styrene triblock copolymers by scanning force microscopy/transmission electron microscopy

The orientation of the microdomains at the free surface of solvent-cast films of a polystyrene-block-polybutadiene-block-polystyrene triblock copolymer with cyclindrical morphology was studied by coupling transmission electron and scanning force microscopies (SFM-TEM). It was found that the cylinders of polystyrene, which are assembled in grains randomly oriented in the bulk, tend to reorient with the main axis perpendicular to the surface. SFM investigation indicates that the hexagonal symmetry of the cylinders is also maintained at the free surface which is characterized by protrusions and corrugation with size and characteristic distances closely related to the cylindrical morphology visible in the bulk. Good quantitative agreement between TEM and SFM measurements is observed.