From molecular to macroscopic engineering: shaping hydrogen-bonded organic nanomaterials

The self‐assembly and self‐organization behavior of chromophoric acetylenic scaffolds bearing 2,6‐bis(acetylamino)pyridine ( 1 , 2 ) or uracyl‐type ( 3 – 9 ) terminal groups has been investigated by photophysical and microscopic methods. Systematic absorption and luminescence studies show that 1 and 2 , thanks to a combination of solvophilic/solvophobic forces and π–π stacking interactions, undergo self‐organization in apolar solvents (i.e., cyclohexane) and form spherical nanoparticles, as evidenced by wide‐field optical microscopy, TEM, and AFM analysis. For the longer molecular module, 2 , a more uniform size distribution is found (80–200 nm) compared to 1 (20–1000 nm). Temperature scans in the range 283–353 K show that the self‐organized nanoparticles are reversibly formed and destroyed, being stable at lower temperatures. Molecular modules 1 and 2 were then thoroughly mixed with the complementary triply hydrogen‐bonding units 3 – 9 . Depending on the specific geometrical structure of 3 – 9 , different nanostructures are evidenced by microscopic investigations. Combination of modules 1 or 2 with 3 , which bears only one terminal uracyl unit, leads to the formation of vesicular structures; instead, when 1 is combined with bis‐uracyl derivative 4 or 5 , a structural evolution from nanoparticles to nanowires is observed. The length of the wires obtained by mixing 1 and 4 or 1 and 5 can be controlled by addition of 3 , which prompts transformation of the wires into shorter rods. The replacement of linear system 5 with the related angular modules 6 and 7 enables formation of helical nanostructures, unambiguously evidenced by AFM. Finally, thermally induced self‐assembly was studied in parallel with modules 8 and 9 , in which the uracyl recognition sites are protected with tert‐butyloxycarbonyl (BOC) groups. This strategy allows further control of the self‐assembly/self‐organization process by temperature, since the BOC group is completely removed on heating. Microscopy studies show that the BOC‐protected ditopic modules 8 self‐assemble and self‐organize with 1 into ordered linear nanostructures, whereas BOC‐protected tritopic system 9 gives rise to extended domains of circular nano‐objects in combination with 1 .     

Micro‐ and Nanometer‐Scale Porous,Fibrous, and Sheet Architectures Constructed by Supramolecular Assemblies of Dipyrrolyldiketones

X‐ray analysis of some 1,3‐dipyrrolyl‐1,3‐propanediones synthesized from pyrroles and malonyl chloride derivatives revealed 1D supramolecular networks formed by N? H???O?C interactions in the solid state. Micro‐ and nanometer‐scale morphologies of porous, fibrous, and sheet structures were fabricated by hydrogen‐bonding interactions and determined by fine‐tuning the substituents and the solvents used. Of the unique polymorphs, ordered 2D lamellar sheet structures of the derivatives with long alkyl chains (C₁₆H₃₃, C₁₄H₂₉, and so on) were constructed by van der Waals hydrophobic effects between aliphatic chains as well as hydrogen bonding.     

Smart materials based on self-assembled hydrogen-bonded comb-shaped supramolecules

Block copolymer self-assembly and supramolecular chemistry can be combined most naturally to prepare smart polymer nanomaterials. An attractive route is based on comb-shaped supramolecules, obtained by attaching side chains to (co)polymers by physical (non-covalent) interactions. Hydrogen bonding is a key element of our approach. It combines an ease of synthesis with other important approach-specific elements, such as hierarchical self-assembly, strongly enhanced processability, swelling, and cleaving. Functional properties discussed include anisotropic proton conductivity, switching proton conductivity, electronically conducting nanowires, polarized luminance, dielectric stacks (optical reflectivity), functional membranes, and nano objects.     

Syntheses and energy transfer in multiporphyrinic arrays self-assembled with hydrogen-bonding recognition groups and comparison with covalent steroidal models

A number of new porphyrins equipped with complementary triple hydrogen-bonding groups were synthesized in good yields. Self-assembly was investigated by NMR spectroscopy, dynamic light scattering (DLS), and atomic force microscopy (AFM). These artificial antenna systems were further characterized by stationary and time-resolved fluorescence techniques to investigate several yet unsolved questions on the mechanism of excitation energy transfer (EET) in supramolecular systems. For example, the photophysics of a simple D--U[triple chemical bond]P--A dyad was studied, in which donor D and acceptor A are ZnII- metalated and free-base porphyrins, respectively, and U (uracyl) and P (2,6-diacetamidopyridyl) are complementary hydrogen-bonding groups linked by flexible spacers. In this dyad, the EET occurs with about 20 % efficiency with a lifetime of 14 ps. Reversal of the nonsymmetric triple hydrogen-bonding groups to give a A--U[triple chemical bond]P--D construct results in an EET efficiency of about 25 % and a lifetime of 19 ps. Thus, there is a slight directionality of EET mediated by these asymmetric triple hydrogen-bonding units tethered to flexible spacers. In polymeric systems of the type P-D-P[triple chemical bond]U-A-U[triple chemical bond]P-D-P, or U-D-U[triple chemical bond]P-A-P[triple chemical bond]U-D-U, the EET efficiency doubles as each donor is flanked by two acceptors. Because doubling the probability of photon capture doubles the EET efficiency, there is no energy amplification, which is consistent with the "antenna effect". For these polymeric systems, AFM images and DLS data indicate large rodlike assemblies of a few hundred nanometers, whereas the components form much smaller aggregates under the same conditions. To understand the importance of the flexible hydrogen-bonding zipper, three different covalently bridged D-B-A molecules were synthesized in which the bridge B is a rigid steroidal system and the same ester chemistry was used to link the porphyrins to each end of the steroid. The geometry inferred from molecular modeling of D-B-A indicates geometric similarities between B and some conformations of the --P[triple chemical bond]U-- supramolecular bridge. Although the EET efficiency is a factor of two greater for the steroidal systems relative to the supramolecular dyads, the rate is 50-80 times slower, but still slightly faster than that predicted by F?rster-type mechanisms. Circular dichrosim (CD) spectra provide a conformational sampling of the porphyrin groups appended on the steroidal skeleton, thus allowing an estimation of the orientation factor kappa for the transition dipole moments, which significantly affects the EET rate. We conclude that the flexible hydrogen-bonded linked systems are adaptive and have variable geometries with foldamers in which the D and A groups can approach well under 1 nm. In these folded conformations, a rapid EET process occurs, probably also involving a Dexter-type exchange mechanism, thus explaining the fast EET relative to the rigid steroidal compounds. This study predicts that it is indeed possible to build large supramolecular antennas and the component design and supramolecular dynamics are essential features that dictate EET rates and efficiencies.     

Sterically and guest-controlled self-assembly of calix[4]arene derivatives

In solvents such as chloroform or benzene, tetraurea calix[4]arenes 1 form dimeric capsules in which one solvent molecule is usually included as guest. To explore the structural requirements for the formation of such hydrogen-bonded dimers we replaced one p-tolylurea residue by a simple acetamide function. The resulting calix[4]arene 2 a, substituted at its wide rim with one acetamide and three p-tolylurea functions, assumes a C(1)-symmetrical conformation in apolar solvents as shown by (1)H NMR, which is not compatible with the usual capsule. In the crystalline state, four molecules of 2 a, adopting a pinched cone conformation, assemble into a quasi S(4)-symmetrical tetramer stabilized by a cyclic array of 24 NH.O==C hydrogen bonds and four NH.pi interactions. Four acetamide groups are hydrogen-bonded to each other and pack tightly in the center of the assembly. All polar residues are buried inside the tetramer, the surface of which is lipophilic. Extensive NMR studies revealed similar structures in apolar solvents such as [D]chloroform or [D(6)]benzene for calixacetamides 2 a-c. The formation of these tetramers in solution is critically dependent on the size of the amide fragment, so that propionamide 2 d, butyramide 2 e, and p-tolylamide 2 f form only ill-defined aggregates. This is caused by steric crowding inside the tetrameric assembly. The tetramers persist during molecular dynamics simulations, and the optimized average structure of the MD run is similar to that found in the crystalline state. Theoretical studies revealed that cooperation of hydrogen bonds with multiple NH.pi, C--H.pi, and pi.pi attractions make the tetramer more stable than the capsular dimer with the solvent as guest. In the presence of tetraethylammonium salts, however, compounds 2 a-e form dimeric capsular assemblies, each incorporating a single ammonium cation. Only one of two possible regioisomeric dimers is formed, in which both acetamide groups are surrounded by two urea residues. These examples give striking evidence of how self-assembly in solution can be strongly dependent on subtle structural factors and of how the formation of dimeric capsules can be induced by the presence of an appropriate guest.     

A Self‐Sorting Scheme Based on Tetra‐Urea Calix[4]arenes

Size and shape do matter : When dimerized in nonpolar solvents, an equimolar mixture of eleven tetra‐urea calix[4]arenes with different wide‐rim substituents self‐sorts into only six out of 35 different homo‐ and heterodimers (see picture). Since the calixarene scaffold and the four urea units are the same in all cases, the self‐sorting process is driven only by the cooperative action of steric requirements and stoichiometry.

     

A Halogen‐Bonded Dimeric Resorcinarene Capsule

Iodine (I₂) acts as a bifunctional halogen‐bond donor connecting two macrocyclic molecules of the bowl‐shaped halogen‐bond acceptor, N‐cyclohexyl ammonium resorcinarene chloride 1 , to form the dimeric capsule [(1,4‐dioxane)₃@ 1 ₂(I₂)₂]. The dimeric capsule is constructed solely through halogen bonds and has a single cavity (V=511 ų) large enough to encapsulate three 1,4‐dioxane guest molecules.     

Hierarchical self-assembly of a bow-shaped molecule bearing self-complementary hydrogen bonding sites into extended supramolecular assemblies

The bow-shaped molecule 1 bearing a self-complementary DAAD-ADDA (D=donor A=acceptor) hydrogen-bonding array generates, in hydrocarbon solvents, highly ordered supramolecular sheet aggregates that subsequently give rise to gels by formation of an entangled network. The process of hierarchical self-assembly of compound 1 was investigated by the concentration and temperature dependence of UV-visible and (1)H NMR spectra, fluorescence spectra, and electron microscopy data. The temperature dependence of the UV-visible spectra indicates a highly cooperative process for the self-assembly of compound 1 in decaline. The electron micrograph of the decaline solution of compound 1 (1.0 mM) revealed supramolecular sheet aggregates forming an entangled network. The selected area electronic diffraction patterns of the supramolecular sheet aggregates were typical for single crystals, indicative of a highly ordered assembly. The results exemplify the generation, by hierarchical self-assembly, of highly organized supramolecular materials presenting novel collective properties at each level of organization.     

Autoamplification of Molecular Chirality through the Induction of Supramolecular Chirality

The novel concept for the autoamplification of molecular chirality, wherein the amplification proceeds through the induction of supramolecular chirality, is presented. A solution of prochiral, ring‐open diarylethenes is doped with a small amount of their chiral, ring‐closed counterpart. The molecules co‐assemble into helical fibers through hydrogen bonding and the handedness of the fibers is biased by the chiral, ring‐closed diarylethene. Photochemical ring closure of the open diarylethene yields the ring‐closed product, which is enriched in the template enantiomer.     

Coadsorption-induced reconstruction of supramolecular assembly characteristics.

A host supramolecular structure consisting of bis-(2,2':6',2"-terpyridine)-4'-oxyhexadecane (BT-O-C16) is shown to respond to coadsorbed molecules in dramatic ways, as observed by scanning tunneling microscopy (STM) on a highly oriented pyrolytic graphite (HOPG) surface under ambient conditions. Interestingly, the lattice parameter of the triphenylene-filled complex differs significantly from that of the coronene-filled one, although the triphenylene and coronene molecules are nearly the same size. The STM study and density functional theory calculations reveal that intermolecular hydrogen-bond interactions play an essential role in forming the assembly structures. The different electronic properties of coronene and triphenylene molecules are responsible for the difference in lattice parameters and consequently for the difference in filling behaviors in the coronene/BT-O-C16 and triphenylene/BT-O-C16 binary systems.     

Dimeric capsules with a nanoscale cavity for [60]fullerene encapsulation

The acid-assisted and guest-induced formation of superstructures was achieved by the addition of haloacetic acids to a toluene solution of the resorcin[4]arene derivatives 1 and [60]fullerenes. The formation of dimeric superstructures that encapsulated a nanosized guest molecule was observed when appropriate acids, such as haloacetic acids, and suitable guest molecules, such as [60]fullerenes, were co-added to a toluene solution of cavitand 1 that has four pyridine units, whereas a complicated equilibrium between several species was detected without [60]fullerenes, and the formation of discrete superstructures was not monitored in the absence of haloacetic acids. The spectroscopic data indicate that the formed [60]fullerene-encapsulated complexes have the structure of 2. These complexes are self-assembled through pyridinium-anion-pyridinium interactions and by pi-pi and van der Waals interactions. The rate of decomplexation of 2 is estimated to be 3.1 s(-1) from a 2D exchange NMR spectrum. The [60]fullerene encapsulation process can be controlled by modifying the amounts of acids used, changing the temperature of the system, altering the ratio of acid/base, and even through varying the solvent polarity. Moreover, the fluorescence spectra show band-narrowing spectral changes and a retardation of the relaxation characteristics of isolated and isotropic [60]fullerenes, which indicates that the environmental change around [60]fullerene is induced upon its encapsulation.