Atomic and molecular adsorption on Pt(1 1 1)

The adsorption of several atomic (H, O, N, S, and C) and molecular (N₂, HCN, CO, NO, and NH₃) species and molecular fragments (CN, CNH₂, NH_2, NH, CH₃, CH₂, CH, HNO, NOH, and OH) on the (1 1 1) facet of platinum, an important industrial and fuel cell catalyst, was studied using self-consistent periodic density functional theory (DFT-GGA) calculations at a coverage of 1/4 ML. The best binding site, energy, and position, as well as an estimated diffusion barrier, of each species were determined. The binding strength for all the species can be ordered as follows: N₂ < NH₃ < HCN < NO < CO < CH₃ < OH < NH₂ < H < CN < NH < O < HNO < CH₂ < NOH < CNH₂ < N < S < CH < C. Although the atomic species generally preferred fcc sites, there was no clear trend in site preference by the molecular species or molecular fragments. The vibrational frequencies of all the stable adsorbates in their best and second best adsorption sites were calculated and found to be in good agreement with experimental values reported in the literature. Finally, the decomposition thermochemistry of NOH, HNO, NO, NH₃, N₂, CO, and CH₃ was analyzed.     

Theoretical simulation of butane isomers adsorption on a Pt(1 0 0) surface

The adsorption of the two butane isomers on Pt(1 0 0) has been characterised with use of density functional simulations. The adsorption energies corresponding to various adsorption configurations were evaluated in good agreement with experimental values. Limited changes of the molecular structure were evidenced. The C-H bond length increases at a degree depending on the surface-hydrogen distance, while the C-C bond length remains similar to that of the free molecule. The surface on-top Pt sites exert a preferential attraction on the molecule, probably through the interaction with the H atoms. The local density of states curves around H as well as C of the adsorbed molecules show dispersed states below the metal Fermi level indicating a molecule-Pt mixing demonstrating a chemical interaction.     

DFT study of Pt adsorption on low index SrTiO3 surfaces: SrTiO3(1 0 0), SrTiO3(1 1 1) and SrTiO3(1 1 0)

Density Functional Theory has been used to determine the energetically preferred structures of submonolayer, monolayer, and multilayer Pt films on both ideal terminations of SrTiO₃(1 0 0), SrTiO₃(1 1 1), and SrTiO₃(1 1 0). The strength of the resulting metal/metal oxide interfaces was characterized by the adsorption energy of the film and the film’s work of separation. The two polar surfaces, SrTiO₃(1 1 1) and SrTiO₃(1 1 0), form significantly stronger interfaces than the non-polar SrTiO₃(1 0 0) surface. Approximate criteria were applied to predict the growth mode of Pt on each surface.     

Initial incorporation of sulfur into the Pd(1 1 1) surface: A theoretical study

Density functional theory is used to investigate the initial inclusion of sulfur into the subsurface interstitial sites of Pd(1 1 1) surface. Pure subsurface adsorption is found to be less energetically favorable than on-surface adsorption. The incorporation of sulfur into the metal becomes more favorable than continuous adsorption on the surface after a critical on-surface sulfur coverage. We find subsurface sulfur occupation to be energetically favorable after adsorption of more than half a monolayer on the surface. Occupation of subsurface sites induces a pronounced structural distortion of the Pd(1 1 1) surface. We find significant expansion of interplanar spacing between the uppermost surface metal layers and rearrangement of the S overlayer. The interplay between the energy cost due to structural distortion of Pd(1 1 1) and the energy gain due to bond formation for different structures is discussed.     

First-principles studies of the oxygen adsorption on unreconstructed and reconstructed Ni(1 1 0) surfaces

First-principles calculations have been performed to investigate the adsorption of oxygen on unreconstructed and reconstructed Ni(1 1 0) surfaces. The energetics, structural, electronic and magnetic properties are given in detail. For oxygen adsorption on unreconstructed surface, (n×1)(n=2,3) substrate with oxygen atom on short-bridge site is found to be the most stable adsorption configuration. Whereas energetically most favorable adsorption phase of reconstructed surface is p(n×1) substrate with oxygen atom located at long-bridge site. Our calculations suggest that the surface reconstruction is induced by the oxygen adsorption. We also find there are redistributions of electronic structure and electron transfer from the substrate to adsorbate. Our calculations also indicate surface magnetic moment is enhanced on clean surfaces and oxygen atoms are magnetized weakly after oxygen adsorption. Interestingly, adsorption on unreconstructed surface does not change surface magnetic moment. However, adsorbate leads to reduction of surface magnetic moment in reconstructed system remarkably.     

CO and hydrogen adsorption on Pd(2 1 0)

We have studied the adsorption of CO on Pd(2 1 0) by performing density functional theory (DFT) calculations within the generalized gradient approximation. We find a relatively small corrugation in the CO adsorption energies with the two bridge sites being energetically almost degenerate. CO is furthermore known as a strong poison in heterogeneous catalysis. We have therefore also addressed the coadsorption of CO with atomic hydrogen. There is a significant inhibition of the hydrogen adsorption due to the presence of CO which is analysed in terms of the electronic structure of the adsorbate system.     

Intermediates in the hydrogenation of benzene to cyclohexene on Pt(1 1 1) and Pd(1 1 1): A comparison from DFT calculations

Catalytic hydrogenation of aromatic compounds is an important process in petroleum industry. Understanding it through experimental or theoretical research can help to improve its efficiency. This work presents a first principles density functional theory study of the intermediates for the first four hydrogenations steps of the smallest aromatic compound, benzene, into C₆H₁₀ species, on two popular catalytic metals, palladium and platinum, described by periodic models. Different structures have been studied for the intermediate C₆H_6+n species, with a various degree of conservation of the conjugation. Some intermediates would present in gas phase a closed-shell conjugated structure, while other would correspond to multiple radicals with a massive destruction of the benzene π system. The Pd and Pt(1 1 1) surfaces strongly differ in terms of most stable structure for the intermediates. On Pd the most conjugated intermediates, i.e. the most stable in gas phase, is clearly preferred. In contrast, on Pt, multiple radical species, highly unstable in gas phase, are strongly stabilized by coupling with the surface. This thermodynamic study indicates a different trend for the hydrogenation mechanism: a clear successive 1-2-3… hydrogenation of neighboring carbon atoms on Pd keeping the largest conjugated fragment, and a nonconsecutive attack, with a maximum breaking of benzene conjugation on Pt.     

Molecular precursor-mediated methanol dissociation on Si(1 1 1)7 × 7: ab initio study

We present an ab initio study of methanol interaction with the Si(1 1 1)7 × 7 surface using a Si(1 1 1)4 × 2 model. The study of the methanol dissociation on Si(1 1 1)4 × 2 shows that pair dissociation on adatom-restatom dangling bonds is largely favoured, in agreement with the experimental observations. The “center” type adatom is slightly more reactive than the “corner” type one, although the difference is weak. Similar behaviour is observed in both adatom types. Our results for a direct CH₃OH dissociation favouring a basic cleavage (adsorption of OH and CH₃ fragments) rather than an acidic one (adsorption of H and OCH₃ fragments), we are finally led to take a kinetic effect into consideration to reconcile theory with experiment. We show that the presence of molecular precursor states is possible. Different orientations with respect to the silicon dangling bonds of these molecular precursors are investigated. However, the corresponding energies are very close and, considering their relative energies, it is finally difficult to discriminate between acidic and basic cleavages.     

Quantum states of hydrogen (H, D, T) atoms on Cu(1 0 0) and (1 1 0) surfaces

We investigate the quantum mechanical behavior of adsorbed hydrogen (H, D, T) on Cu(1 0 0) and (1 1 0) surfaces. We construct potential energy surfaces (PESs) for the motion of the hydrogen H atom on Cu(1 0 0) and (1 1 0) surfaces within the framework of density functional theory. The potential energy takes a minimum value on the hollow site of Cu(1 0 0) and on the short bridge site of Cu(1 1 0). Moreover, we calculate the quantum states of hydrogen atom motion on these calculated PESs. The ground state wave function of the hydrogen atom motion is strongly localized around the hollow site on the Cu(1 0 0) surface. On the other hand, the ground state wave function of the hydrogen atom motion on Cu(1 1 0) is distributed from the short bridge site to two neighboring pseudo-threefold sites. We finally show isotope effects on the quantum states of the motion of hydrogen on both surfaces.     

Adsorption of cyclohexadiene, cyclohexene and cyclohexane on Pt(1 1 1)

The adsorption of 1,3-cyclohexadiene, 1,4-cyclohexadiene, cyclohexene and cyclohexane on Pt(1 1 1) was studied using ab initio density functional theory. For 1,3-cyclohexadiene three adsorption modes were distinguished: bridge 1,2-di-σ/3,4-π, hollow 1,4-di-σ/2,3-π and bridge 1,4-di-σ/2,3-π with adsorption energies of −155, −147 and −75 kJ/mol, respectively. Three stable adsorption modes were also identified for 1,4-cyclohexadiene: bridge quadra-σ, hollow di-σ/π and bridge di-π with adsorption energies of −146 kJ/mol, −142 kJ/mol and −88 kJ/mol, respectively. Cyclohexene was found to adsorb in six modes: 4 di-σ and 2 π-adsorption modes. The preferred configuration was found to be boat di-σ with an adsorption energy of −81 kJ/mol. The three other di-σ adsorption modes have comparable adsorption energies, ranging from −64 to −69 kJ/mol. Molecular strain and CPt bonding energies are used to elucidate stability trends. Cyclohexane is found to adsorb only at the hollow site whereby the axial hydrogen atoms are positioned over surface Pt-atoms with an adsorption energy of −37 kJ/mol. The calculations correctly predict the weakening of the axial CH bonds and provide a possible explanation for the large shift in the vibrational frequencies.     

O2 dissociation on Pd(2 1 1) and Cu(2 1 1) surfaces

We have performed ab initio Density Functional Theory (DFT) based calculations to observe the reactivity of the Pd(2 1 1) and Cu(2 1 1) surfaces towards O₂. In order to properly address the adsorption dynamics, the static potential energy surface calculations have been complemented with first principles molecular dynamics calculations, which reveal interesting steering effects that complicate the dissociation dynamics. We have found that on both surfaces the step microfacets are very reactive and the dissociation of the O₂ molecule at room temperature occurs mostly on those sites.     

Theoretical studies on the adsorption and decomposition of H2O on Pd(1 1 1) surface

To provide information about the chemistry of water on Pd surfaces, we performed density functional slab model studies on water adsorption and decomposition at Pd(1 1 1) surface. We located transition states of a series of elementary steps and calculated activation energies and rate constants with and without quantum tunneling effect included. Water was found to weakly bind to the Pd surface. Co-adsorbed species OH and O that are derivable from H₂O stabilize the adsorbed water molecules via formation of hydrogen bonds. On the clean surface, the favorable sites are top and bridge for H₂O and OH, respectively. Calculated kinetic parameters indicate that dehydrogenation of water is unlikely on the clean regular Pd(1 1 1) surface. The barrier for the hydrogen abstraction of H₂O at the OH covered surface is approximately 0.2-0.3 eV higher than the value at the clean surface. Similar trend is computed for the hydroxyl group dissociation at H₂O or O covered surfaces. In contrast, the O-H bond breaking of water on oxygen covered Pd surfaces, H₂O_ad + O_ad → 2OH_ad, is predicted to be likely with a barrier of ∼0.3 eV. The reverse reaction, 2OH_ad → H₂O_ad + O_ad, is also found to be very feasible with a barrier of ∼0.1 eV. These results show that on oxygen-covered surfaces production of hydroxyl species is highly likely, supporting previous experimental findings.     

First-principles study on field evaporation of surface atoms from W(0 1 1) and Mo(0 1 1) surfaces

The simulations of field-evaporation processes for surface atoms on W(0 1 1) and Mo(0 1 1) surfaces are implemented using first-principles calculations based on the real-space finite-difference method. The threshold values of the external electric field for evaporation of the surface atoms, which are ∼6 V/Å for tungsten and ∼5 V/Å for molybdenum, are in agreement with the experimental results. While the threshold value of the electric field and the local-field enhancement around the evaporating atoms agree with those expected from the conclusion of the previous study using structureless jellium, the induced charge around the surface atom has a significant difference from that obtained by the jellium model.     

First principle calculations of benzotriazole adsorption onto clean Cu(1 1 1)

The adsorption of benzotriazole (BTAH or C₆N₃H₅) on a Cu(1 1 1) surface is investigated by using first principle density functional theory calculations (VASP). It is found that BTAH can be physisorbed (<0.1 eV) or weakly chemisorbed (∼0.43 eV) onto Cu(1 1 1), and the chemical bond is formed through nitrogen sp² lone pairs. The weak chemisorption can be stabilized by reaction with neighboring protonphilic radicals, like OH⁻. Furthermore, the geometries and associated energies of intermolecular hydrogen bonds between adsorbates on Cu(1 1 1) are also calculated. A model of the first layer of BTAH/BTA⁻ on Cu(1 1 1) surface is developed based on a hydrogen bond network structure.     

The adsorption of methylcyclopentane on Pt(1 1 1)

The adsorption of methylcyclopentane (MCP) on Pt(1 1 1) has been studied using the atom superposition and electron delocalization (ASED-MO) molecular orbital method. Results show a weak interaction with the metallic surface. The adsorption energy is rather independent of the adsorption site coordination number. We find that Pt 6s, 6p_z and 5d_z² orbitals are involved in the bonding with MCP. There is no bonding between the carbon ring and the Pt surface and the interaction comes from the hydrogen atoms to the surface.     

A DFT study of the chemisorption of methoxy on clean and low oxygen precovered Ru(0 0 0 1) surfaces

Adsorption of the methoxy radical on clean and on low oxygen precovered Ru(0 0 0 1) metallic surfaces has been studied by density-functional theory cluster calculations. Methoxy is predicted to be preferentially chemisorbed on both hollow sites (hcp and fcc) of such surfaces, and adopts an upright orientation (C_3ν local symmetry). Such prediction is supported by the good agreement found between the calculated vibrational frequencies and the experimentally observed RAIRS spectra. Regarding the charge transfer process between the adsorbate and the surface, our results suggest that the bonding is dominantly polar covalent which arises from a charge donation from the ruthenium surface to the radical, and the co-adsorbed electronegative oxygens deplete slightly the surface electron density. However, the major difference is not induced through much O-Ru bonding, but indirectly, by lowering the valence d-band center of the system. This results in a lower adsorption energy for methoxy than on the clean Ru(0 0 0 1) surface, in accordance with experimental data. Further, accordingly to the present calculations, the radical is expected to dissociate or desorb more easily on the modified surface but with no participation from the co-adsorbed oxygen atoms.     

CO adsorption on the Pt(1 1 1) surface: a comparison of a gradient corrected functional and a hybrid functional

The adsorption of CO on the Pt(1 1 1) surface in a pattern has been studied with the gradient corrected functional of Perdew and Wang and the B3LYP hybrid functional. A slab which is periodic in two dimensions is used to model the system. The Perdew-Wang functional incorrectly gives the fcc site as the most favorable adsorption site, in accord with a set of previous studies. The B3LYP functional gives the top site as the preferred site. This confirms results from cluster studies where it was suggested that the different splitting, dependent on the functional, between highest occupied and lowest unoccupied molecular orbital, could be the reason for this change of the adsorption site. This is supported by an analysis based on the projected density of states and the Mulliken population.     

SiO adsorption on a p(2 × 2) reconstructed Si(1 0 0) surface

We have investigated the adsorption mechanism of SiO molecule incident on a clean Si(1 0 0) p(2 × 2) reconstructed surface using density functional theory based methods. Stable adsorption geometries of SiO on Si surface, as well as their corresponding activation and adsorption energies are identified. We found that the SiO molecule is adsorbed on the Si(1 0 0) surface with almost no activation energy. An adsorption configuration where the SiO binds on the channel separating the dimer rows, forming a Si-O-Si bridge on the surface, is the energetically most favourable geometry found. A substantial red-shift in the calculated vibrational frequencies of the adsorbed SiO molecule in the bridging configurations is observed. Comparison of adsorption energies shows that SiO adsorption on a Si(1 0 0) surface is energetically less favourable than the comparable O₂ adsorption. However, the role of SiO in the growth of silicon sub-oxides during reactive magnetron plasma deposition is expected to be significant due to the relatively large amount of SiO molecules incident on the deposition surface and its considerable sticking probability. The stable adsorption geometries found here exhibit structural properties similar to the Si/SiO₂ interface and may be used for studying SiO_x growth.     

Conformation-selective adsorption of 2,3-butanediol on Si(0 0 1)

The adsorption of 2,3-butanediol on the Si(0 0 1) surface is studied by means of first-principles pseudopotential calculations. Molecular adsorption on top of the Si dimers resulting in a 6-membered ring of the O-C-C-O segment with the dimer atoms is energetically favored, in agreement with the interpretation of recent experiments. The adsorption energy difference for butanediol adsorbed in either gauche or anti conformation is nearly one order of magnitude larger than the energy difference between the respective conformers in gas phase, pointing to a conformation-selective adsorption.     

Surface structure of K/Pd(1 0 0) and the effect of H coadsorption: Density functional theory calculations

We have performed density-functional theory calculations to study the atomic structure of the K/Pd(1 0 0)-p(2 × 2) and -c(2 × 2) surfaces formed at 0.25 ML and 0.5 ML, respectively. We find that K atoms prefer the hollow site with the K adsorption height 2.44 Å for p(2 × 2) and 2.50 Å c(2 × 2). The first interlayer spacing (d₁₂) of the Pd(1 0 0) substrate appears slightly contracted from the bulk value as Δd₁₂ = −0.8% and −0.3% for p(2 × 2) and c(2 × 2), respectively. The calculated contraction Δd₁₂ = −0.3% for c(2 × 2) is not in accord with the expansion Δd₁₂ = +1.3% reported by a low-energy electron diffraction (LEED) study. As the origin of this difference, a possibility of hydrogen contamination of the surface sample used in the LEED study is suggested: Our calculations show that the d₁₂ of K/Pd(1 0 0)-c(2 × 2) increases linearly with the coverage of H coadsorption, which leads to an estimation for the H coverage of the surface sample as 0.1-0.4 ML.