Vibrational circular dichroism and absolute configuration of chiral sulfoxides: tert-butyl methyl sulfoxide

Mid-infrared vibrational unpolarised absorption and vibrational circular dichroism (VCD) spectra of CCl4 solutions of tert-butyl methyl sulfoxide (1) are reported. The spectra are compared to ab initio density functional theory (DFT) calculations carried out using two functionals, B3PW91 and B3LYP, and two basis sets, 6-31G* and TZ2P. The VCD spectra are calculated using Gauge-invariant atomic orbitals (GIAOs). The analysis of the VCD spectrum confirms the R(-)/S(+) absolute configuration of 1. The advantages and disadvantages of VCD spectroscopy in determining the absolute configurations of chiral sulfoxides are discussed.     

Determination of absolute configuration using vibrational circular dichroism spectroscopy: the chiral sulfoxide 1-(2-methylnaphthyl) methyl sulfoxide

We report the determination of the absolute configuration (AC) of the chiral sulfoxide, 1-(2-methylnaphthyl) methyl sulfoxide, 1, using vibrational circular dichroism (VCD) spectroscopy. The VCD of 1 has been measured in the mid-IR spectral region in CCl(4) solution. Analysis employs the ab initio DFT/GIAO methodology. DFT calculations predict two stable conformations of 1, E and Z, Z being lower in energy than E by <1 kcal/mol. In both conformations the S-O bond is rotated from coplanarity with the naphthyl moiety by 30-40 degrees. The predicted unpolarized absorption ("IR") spectrum of the equilibrium mixture of the two conformations permits assignment of the experimental IR spectrum in the mid-IR spectral region. The presence of both E and Z conformations is clearly evident. The VCD spectrum predicted for S-1 is in excellent agreement with the experimental spectrum of (-)-1, unambiguously defining the AC of 1 as R(+)/S(-).     

Determination of absolute configuration using vibrational circular dichroism spectroscopy: the chiral sulfoxide 1-thiochroman S-oxide

We have determined the absolute configuration of the chiral sulfoxide 1-thiochroman S-oxide 1 using vibrational circular dichroism (VCD) spectroscopy. The VCD spectrum of a CCl₄ solution of 1 was analyzed using density functional theory (DFT), which predicts three stable conformations of 1, separated by <1 kcal/mol. The VCD spectrum predicted using the DFT/GIAO methodology for the equilibrium mixture of the three conformations of (S)-1 is in excellent agreement with the experimental spectrum of (+)-1. The absolute configuration of 1 is therefore (R)-(−)/(S)-(+). (+)-1 and (−)-1 of high enantiomeric excess (e.e.) were synthesized in high yields via asymmetric oxidation of 1-thiochroman 2 using Ti(iso-PrO)₄/(R,R)-1,2-diphenylethane-1,2-diol/H₂O/tert-butyl hydroperoxide and Ti(iso-PrO)₄/l-diethyl tartrate/H₂O/cumene hydroperoxide, respectively.     

Electronic Structures of 5d Transition Metal Monoxides by Density Functional Theory

Bond distances, vibrational frequencies, electron affinities, ionization potentials, and dissociation energies of the diatomic 5d transition metal (except La) monoxides and their positively and negatively charged ions were studied by use of density functional methods B3LYP, BLYP, B3PW91, BPW91, B3P86, BP86, MPW1PW91, PBE1PBE, and SVWN. Our calculation shows that for each individual species, the calculated properties are quite sensitive to the method used. Compared with hybrid density functional method B3PW91 (B3P86), pure density functional method BPW91 (BP86) gives longer bond distance (lower vibrational frequency) from HfO to PtO for neutral species, HfO⁺ to IrO⁺ for cationic species, and HfO⁻ to AuO⁻ for anionic species. While for B3LYP and BLYP, the trend was observed for cationic species from HfO⁺ to IrO⁺ and anionic species from HfO⁻ to AuO⁻ (except TaO⁻), but not for neutrals. Pure density function methods BLYP, BPW91, and BP86 give larger dissociation energy compared with hybrid density functional methods B3LYP, B3PW91, and B3P86. SVWN in most cases gives the smallest bond distance, while BLYP gives the largest value. MPW1PW91 and PBE1PBE show the same performance in predicting the spectroscopic constants. In addition, useful empirical criteria that one has obtained the ground states of a species and its ions are the spin multiplicities of a neutral and its single charged ions which differs by ±1.     

Determination of the absolute configuration of a chiral oxadiazol-3-one calcium channel blocker, resolved using chiral chromatography, via concerted density functional theory calculations of its vibrational circular dichroism, electronic circular dichroism, and optical rotation

The chiral oxadiazol-3-one 2 has recently been shown to exhibit myocardial calcium entry channel blocking activity, substantially higher than that of diltiazem. To determine the enantioselectivity of this activity, the enantiomers of 2 have been resolved using chiral chromatography. The absolute configuration (AC) of 2 has been determined by comparison of density functional theory (DFT) calculations of its vibrational circular dichroism (VCD) spectrum, electronic circular dichroism (ECD) spectrum, and optical rotation (OR) to experimental VCD, ECD, and OR data. All three chiroptical properties yield identical ACs; the AC of 2 is unambiguously determined to be S(+)/R(-).     

DFT studies of the phosphinidene derivative HPNaF and its insertion reaction with R–H(R=F,OH, NH<Subscript>2</Subscript>, CH<Subscript>3</Subscript>)

The formations of the phosphinidene derivative HPNaF and its insertion reactions with R–H (R=F, OH, NH₂, CH₃) have been systematically investigated employing the density functional theory (DFT), such as the B3LYP and MPW1PW91 methods. A comparison with the results of MP2 calculations shows that MPW1PW91 underestimates the barrier heights for the four reactions considered. Similarly, the same is also true for the B3LYP method depending on the selected reactions, but by much less than MPW1PW91, where the barrier heights of the four reactions are 25.2, 85.7, 119.0, and 142.4 kJ/mol at the B3LYP/6-311+G* level of theory, respectively. All the mechanisms of the four reactions are identical to each other, i.e., an intermediate has been located during the insertion reaction. Then, the intermediate could dissociate to substituted phosphinidane(H₂RP) and NaF with a barrier corresponding to their respective dissociation energies. Correspondingly, the reaction energies for the four reactions are −92.2, −68.1, −57.2, and −44.3 kJ/mol at the B3LYP/6-311+G* level of theory, respectively, where both the B3LYP and MPW1PW91 methods underestimate the reaction energies compared with the MP2 results. The linear correlations between the calculated barrier heights and the reaction energies have also been observed. As a result, the relative reactivity among the four insertion reactions should be as follows: H–F > H–OH > H–NH₂ > H–CH₃.     

Analysis of the major chiral compounds of Artemisia herba-alba essential oils (EOs) using reconstructed vibrational circular dichroism (VCD) spectra: En route to a VCD chiral signature of EOs

An unprecedented methodology was developed to simultaneously assign the relative percentages of the major chiral compounds and their prevailing enantiomeric form in crude essential oils (EOs). In a first step the infrared (IR) and vibrational circular dichroism (VCD) spectra of the crude essential oils were recorded and in a second step they were modelized as a linear weighted combination of the IR and VCD spectra of the individual spectra of pure enantiomer of the major chiral compounds present in the EOs. The VCD spectra of enantiomer of known enantiomeric excess shall be recorded if they are not yet available in a library of VCD spectra. For IR, the spectra of pure enantiomer or racemic mixture can be used. The full spectra modelizations were performed using a well known and powerful mathematical model (least square estimation: LSE) which resulted in a weighting of each contributing compound. For VCD modelization, the absolute value of each weighting represented the percentage of the associate compound while the attached sign addressed the correctness of the enantiomeric form used to build the model. As an example, a model built with the non-prevailing enantiomer will show a negative sign of the weighting value. For IR spectra modelization, the absolute value of each weighting represented the percentage of the compounds without of course accounting for the chirality of the prevailing enantiomers. Comparison of the weighting values issuing from IR and VCD spectra modelizations is a valuable source of information: if they are identical, the EOs are composed of nearly pure enantiomers, if they are different the chiral compounds of the EOs are not in an optically pure form. The method was applied on four samples of essential oil of Artemisia herba-alba in which the three major compounds namely (−)-α-thujone, (+)-β-thujone and (−)-camphor were found in different proportions as determined by GC–MS and chiral HPLC using polarimetric detector. In order to validate the methodology, the modelization of the VCD spectra was performed on purpose using the individual VCD spectra of (−)-α-thujone, (+)-β-thujone and (+)-camphor instead of (−)-camphor. During this work, the absolute configurations of (−)-α-thujone and (+)-β-thujone were confirmed by comparison of experimental and calculated VCD spectra as being (1S,4R,5R) and (1S,4S,5R) respectively.     

Identification of Anionic Supramolecular Complexes of Sulfonamide Receptors with Cl<Superscript>−</Superscript>, NO<Stack><Subscript>3</Subscript><Superscript>−</Superscript></Stack>, Br<Superscript>−</Superscript>, and I<Superscript>−</Superscript> by APCI-MS

As part of a mass spectrometric investigation of the binding properties of sulfonamide anion receptors, an atmospheric pressure chemical ionization mass spectrometric (APCI-MS) method involving direct infusion followed by thermal desorption was employed for identification of anionic supramolecular complexes in dichloromethane (CH₂Cl₂). Specifically, the dansylamide derivative of tris(2-aminoethyl)amine (tren) (1), the chiral 1,3-benzenesulfonamide derivatives of (1R,2S)-(+)-cis-1-amino-2-indanol (2), and (R)-(+)-bornylamine, (3), were shown to bind halide and nitrate ions in the presence of (n−Bu)₄N⁺X⁻ (X⁻ = Cl⁻, NO₃⁻, Br⁻, I⁻). Solutions of receptors and anions in CH₂Cl₂ were combined to form the anionic supramolecular complexes, which were subsequently introduced into the mass spectrometer via direct infusion followed by thermal desorption. The anionic supramolecular complexes [M+X]⁻, (M=1–3, X⁻=Cl⁻, NO₃⁻, Br⁻, I⁻) were observed in negative mode APCI-MS along with the deprotonated receptors [M−H]⁻. Full ionization energy of the APCI corona pin (4.5 kV) was necessary for obtaining mass spectra with the best signal-to-noise ratios.     

Optical rotation and two chiral C atoms of aliphatic cyclic dipeptides

Accurate geometries structures and total energies have been determined for the conformers of cyclo(L-Pro-Gly), cyclo(L-Ala-L-Ala), and cyclo(L-Pro-Ala) in the gaseous phase, using HF and B3LYP correlation methods at 6−31++G(d), 6−311++G(d, p), 6−311++G(2d, 2p) and aug-cc-pvdz basis sets. High level computations MP2 with 6−311++G(2d, 2p) basis set indicate that the relative stabilities of the available conformers can be determined correctly at the B3LYP/6−311++g(2d, 2p) level of theory. We have also described the implementation of DFT and HF theory for calculations of the optical rotation at 589.3 nm. In L-Ala-L-Ala, and L-Pro-Ala molecules, they have two chiral C (C*), so we discuss the different effect of two chiral C to optical activity of cydo(L-Pro-Gly), cyclo(L-Ala-L-Ala), and cyclo(L-Pro-Ala).     

Structures and stability of N9, N9 − and N9 + clusters

 Ab initio molecular orbital calculations for N₉, N⁻ ₉ and N⁺ ₉ isomers were carried out at the HF/ 6-31G*, B3PW91/6-31G*, B3LYP/6-31G* and MP2/ 6-31G* levels of theory. Stable equilibrium geometric structures were determined by harmonic vibrational frequency analyses at the HF/6-31G*, B3PW91/6-31G* and B3LYP/6-31G* levels of theory. The most stable free-radical N₉ cluster is structure 1 with C _{2 v} symmetry and that of anion N⁻ ₉ is structure 3 with C _s symmetry. Only one stable structure of the N⁺ ₉ cation with C _{2 v} symmetry was predicted. Their potential application as high-energy-density materials has been examined. Received: 15 June 1999 / Accepted: 11 October 1999 / Published online: 14 March 2000     

Absolute configurations of endoperoxides determined by vibrational circular dichroism (VCD)

Diastereomeric mixture on the peroxide portion of an endoperoxide acetylmajapolene A (1) was efficiently separated by HPLC on a chiral column, submitting to vibrational circular dichroism (VCD) investigation. The ab initio theoretical VCD and IR calculations of 1a and 1b were performed by density functional theory (DFT) using the B3PW91/6-31G(d,p) level of theory. Focusing on an isolated characteristic peroxide vibrational band, absolute configurations of 1a and 1b were unambiguously determined as (1R,4R,7S,10S) and (1S,4S,7S,10S), respectively. This is the first VCD application to endoperoxides which exist abundantly in nature.     

Theoretical investigation of differences of optical rotation,electronic circular dichroism and vibrational circular dichroism of α-hydroxyl cyclic ketones and esters as monomers or dimers in solution

To understand or identify whether a dimer forms or not derived from a chiral compound via H-bonds in solution is critically important. In our previous study, sotolon 1 has two methyl groups, it can form dimers in solution, but maple furanone 2, derived from 1, has one ethyl group and one methyl group, it cannot form dimer. This could be checked by using chiroptical spectroscopies of optical rotation (OR), electronic circular dichroism (ECD) and vibrational circular dichroism (VCD). In this study, four methods was used for the chiral α-hydroxyl ketones and esters (3–8). B3LYP and MPW1PM91 methods with four sets were used to calculate OR, ECD and VCD. The theoretical results exhibited that VCD method could provide more details and promises to ultimately distinguish between the presence of monomer or dimer in solution.     

Hydrosilylation of acetophenone with diphenylsilane in the presence of rhodium(I) complexes with chiral amines

New chiral rhodium complexes cis-[Rh(CO)₂(RNH₂)Cl] [RNH₂ = (R)-(−)-cis-MyrtNH₂, (R)-(−)-MenthylNH₂, (R)-(+)-BornylNH₂] were synthesized and their catalytic properties in reactions of hydrosilylation of acetophenone with diphenylsilane were studied. It was shown that the reaction products were diphenyl-1-phenylethoxysilane, diphenyl-1-phenylvinyloxysilane and 1,1,3,3-tetraphenyldisiloxane. The best catalytic activity displayed (−)-cis-[Rh(CO)₂(MenthNH₂)Cl]. The hydrosilylation of acetophenone with diphenylsilane in the presence of [Rh(CO)₂(μ-Cl)]₂ and [Rh(cod)Cl]₂ and amines in situ was studied. The best ratio amine:complex = 5:1 was established. With the catalytic systems based on [Rh(cod)Cl]₂ or [Rh(CO)₂(μ-Cl)]₂ the activity increased in the series of amines: (R)-(−)-cis-MyrtNH₂ < (R)-(−)-MenthylNH₂ < (R)-(+)-BornylNH₂, and (R)-(−)-MenthylNH₂ < (R)-(+)-BornylNH₂ < (R)-(−)-cis-MyrtNH₂, respectively. The chemoselectivity maximum was observed in the presence of [Rh(cod)Cl]₂ with (R)-(−)-MenthylNH₂ and [Rh (CO)₂(μ-Cl)]₂ with (R)-(+)-BornylNH₂; maximum asymmetric induction was 43.5% ee at the use of [Rh(CO)₂ (μ-Cl)]₂ and (R)-(+)-BornylNH₂.     

The C−NO2 bond dissociation energies of some nitroaromatic compounds: DFT study

The C−NO₂ bond dissociation energies in nitrobenzene; 3-amino-nitrobenze; 4-amino-nitrobenze; 1,3-dinitrobenzene; 1,4-dinitrobenzene; 2-methyl-nitrobenzene; 4-methyl-nitrobenzene; and 1,3,5-trinitrobenzene nitroaromatic molecules, are computed using B3LYP, B3PW91, B3P86 three-parameter hybrid Density Functional Theory (DFT) methods in conjunction with 6-31G^** basis set. By comparing the computed energies and experimental ones, it is found that B3P86/6-31G^** is not capable of predicting the satisfactory bond dissociation energy (BDE). The BDEs computed with both B3LYP/6-31G^** and B3PW91/6-31G^** for the nitroaromatic molecules are closer to the experimental ones than those obtained with B3P86/6-31G^**. But, when compared with the experimental one, the BDE from the B3LYP/6-31G^** has the maximum deviation, which is completely outside our desired target accuracy for chemical predictions (less than 2.00 kcal mol⁻¹). Therefore, we suggest B3PW91/6-31G^** method as a reliable method of computing the BDE for removal of the nitrogen dioxide group in the nitroaromatic compounds. In addition, the C−NO₂ BDEs for 2,4,6-trinitrotoluene (TNT), triaminotrinitrobenzene (TATB), diaminotrinitrobenzene (DATB), and picramide are studied with B3PW91/6-31G^** method.     

Simple synthesis of new chiral oxindole derivative

A synthesis of chiral optically active 3-hydroxyoxindoles with 1,3-disubstituted 2,2-dimethyl-cyclobutane structural fragment by the Et₂NH-catalyzed aldol reaction of indoline-2,3-diones with (−)-(1S,3S)-pinonic acid derivatives is described. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 7, pp. 1540–1543, July, 2008.     

Prototropic acetylene-allene isomerization in planarly chiral ferrocenes. Intramolecular acymmetric induction in the course of the formation of chiral axis

Racemic 2-trimethylsilyl- and 2-trimethylstannyl-1-(3-phenyl-2-propynyl)ferrocene (rac-1a,b) as well as the dextrorotatory specimen of the latter, (+)-1b, were synthesized in two steps from racemic 1-formyl-2-trimethylsilyl- and 1-formyl-2-trimethylstannylferrocenes (2a,b) or from the levorotatory specimen of the latter, (–)-2b, respectively. On the contact with strongly alkaline alumina compounds1a,b and (+)-1b undergo diastereoselective prototropic acetylene-allene rearrangement to give predominantly one of the two possible stereoisomers of 2-trimethylsilyl- or 2-trimethylstannyl-1-(3-phenyl-1,2-propadienyl)ferrocenes,rac-4a,b or (+)-4b, depending on the starting material (d. e. 30–40 %). The extent of intramolecular asymmetric induction in the formation of the axially chiral fragment during the transformation of (+)-1b to (+)-4b is estimated at 38 %.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 6, pp. 1111– 1115, June, 1994.The work was carried out with financial support from the Russian Fundamental for Basic Research (Project No.93-03-5827).     

Chiral terpenes in different phases: <Emphasis Type="Italic">R</Emphasis>-(−)-camphorquinone studied by IR–Raman–VCD spectroscopies and theoretical calculations

R-(−)-camphorquinone is a bicyclical terpenoid with many usages and application in different fields. Different experimental and theoretical works reveal that there is only one stable conformer of this chiral chemical species in agreement to the sterical restriction that the bicycle introduces. In the current work, from a complete assignment of the vibrational IR and Raman spectra, we are able to explain the VCD spectrum of the title compound. The recorded spectra of R-(−)-camphorquinone in different phases have been analyzed and compared: the first one in CCl₄ solution, the second one using Nujol and Fluorolube suspensions and the third one using thin films. Finally, to study the coupling between the two C=O stretching normal modes, a NBO analysis is performed. The present work reveals that IR, Raman and VCD, combined with quantum chemical calculations, are helpful complementary techniques to characterize chiral systems, as terpenes, in different phases.     

Circular dichroism thermal lens microscope in the UV wavelength region (UV-CD-TLM) for chiral analysis on a microchip

We have developed a circular-dichroism thermal lens microscope for UV wavelengths (UV-CD-TLM), for the first time, to realize sensitive chiral analysis on a microchip. Quasi-continuous-wave phase modulation of a pulsed UV laser was used to generate left-circularly polarized light and right-circularly polarized light and to detect the generated TL signal amplitude and phase with a lock-in amplifier. The amplitude and phase were used to determine the concentration and chirality, respectively, of a sample. The basic principle of UV-CD-TLM for chiral analysis on a microchip was verified by measuring aqueous solutions of optically active camphorsulfonic acids (CSA). Lower limits of detection (LOD) were calculated at S/N = 2 and were 8.7 × 10⁻⁴ mol L⁻¹ (ΔA = 5.2 × 10⁻⁶ Abs.) for (+)-CSA and 8.4 × 10⁻⁴ mol L⁻¹ (ΔA = 5.0 × 10⁻⁶ Abs.) for (−)-CSA. In terms of number of molecules, LODs for UV-CD-TLM were calculated to be 8.7 fmol and 8.4 fmol, respectively. This is at least three orders of magnitude lower than previously obtained. The applicability of UV-CD-TLM for chiral analysis on a microchip was verified. Figure Sensitive chiral analysis by thermal lens microscope (TLM)     

Complete basis set,hybrid-DFT study,and NBO interpretations of the conformational behavior of 1,2-dihaloethanes

The conformational behavior of 1,2-difluoroethane (1), 1,2-dichloroethane (2), 1,2-dibromoethane (3), and 1,2-diiodoethane (4) have been analyzed by means of complete basis set CBS-QB3, hybrid-density functional theory (B3LYP/Def2-TZVPP) based methods and natural bond orbital (NBO) interpretation. Both methods showed the expected greater stability of the gauche conformation of compound 1 compared to its anti conformation. Contrary to compound 1, the anti conformations of compounds 2–4 are more stable than their gauche conformation. The stability of the anti conformation compared to the gauche conformation increases from compound 1 to compound 4. The NBO analysis of donor–acceptor (σ → σ*) interactions showed that the generalized anomeric effect (GAE) is in favor of the gauche conformation of compound 1. Contrary to compound 1, GAE is in favor of the anti conformations of compounds 2–4. The GAE values calculated (i.e., GAE_anti − GAE_gauche) increase from compound 1 to compound 4. On the other hand, the calculated dipole moment values for the gauche conformations decrease from compound 1 to compound 4. In the conflict between the GAE and dipole moments, the former succeeded in accounting for the increase of the anti conformation stability from compound 1 to compound 4. There is a direct correlation between the calculated GAE, ∆[r _c–c(G) − r _c–c(A)] and ∆[r _c–x(A) − r _c–x(G)] parameters. The correlations between the GAE, bond orders, total steric exchange energies (TSEEs), ΔG _{Anti–Gauche}, ΔG ^‡(Gauche → Gauche′, C _2v), ΔG ^‡(Anti → Gauche, C ₂), dipole–dipole interactions, structural parameters, and conformational behaviors of compounds 1–4 have been investigated.     

New chiral Schiff bases derived from (+)- and (−)-α-pinenes in the metal complex catalyzed asymmetric oxidation of sulfides

New chiral Schiff bases were derived from (+)- and (−)-α-pinenes for the first time. Coordinated to vanadium ions, they can be used as ligands in catalytic oxidation of sulfides into chiral sulfoxides. Conditions for the asymmetric oxidation of thioanisole to methyl phenyl sulfoxide in optical purity up to 32% were found. Variation of substituents in the ligand has a significant effect not only on enantioselectivity of the reaction, but also on absolute configuration of the sulfoxide formed. Dedicated to Academician G. A. Tolstikov in honor of his 75th anniversary. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 105–113, January, 2008.