Femtomolar Ln(III) affinity in peptide-based ligands containing unnatural chelating amino acids

The incorporation of unnatural chelating amino acids in short peptide sequences leads to lanthanide-binding peptides with a higher stability than sequences built exclusively from natural residues. In particular, the hexadentate peptide P(22), which incorporates two unnatural amino acids Ada(2) with aminodiacetate chelating arms, showed picomolar affinity for Tb(3+). To design peptides with higher denticity, expected to show higher affinity for Ln(3+), we synthesized the novel unnatural amino acid Ed3a(2) which carries an ethylenediamine triacetate side-chain and affords a pentadentate coordination site. The synthesis of the derivative Fmoc-Ed3a(2)(tBu)(3)-OH, with appropriate protecting groups for direct use in the solid phase peptide synthesis (Fmoc strategy), is described. The two high denticity peptides P(HD2) (Ac-Trp-Ed3a(2)-Pro-Gly-Ada(2)-Gly-NH(2)) and P(HD5) (Ac-Trp-Ada(2)-Pro-Gly-Ed3a(2)-Gly-NH(2)) led to octadentate Tb(3+) complexes with femtomolar stability in water. The position of the high denticity amino acid Ed3a(2) in the hexapeptide sequence appears to be critical for the control of the metal complex speciation. Whereas P(HD5) promotes the formation of polymetallic species in excess of Ln(3+), P(HD2) forms exclusively the mononuclear complex. The octadentate coordination of Tb(3+) by both P(HD) leads to total dehydration of the metal ion in the mononuclear complexes with long luminescence lifetimes (>2 ms). Hence, we demonstrated that unnatural amino acids carrying polyaminocarboxylate side-chains are interesting building blocks to design high affinity Ln-binding peptides. In particular the novel peptide P(HD2) forms a unique octadentate Tb(3+) complex with femtomolar stability in water and an improvement of the luminescence properties with respect to the trisaquo TbP(22) complex by a factor of 4.     

Novel Zn（Ⅱ） ladder-like coordination polymer constructed from designed ferrocenyl ligand

Reaction of Zn（NO3）2·6H2O with 3-（4-carboxylphenylamino）-l-ferrocenyl-2-butylen-l-one （HL） and 4,4′-bipyfidine （4,4′- bipy） in methanol solution resulted in a novel ladder-like coordination polymer {[Zn2L2（μ2-L）2（4,4′-bipy）2]·MeOH}n （1）. Its crystal structure, thermal and electrochemical properties are presented.     

Synthesis and characterization of mixed ligand complexes of Zn(II) and Co(II) with amino acids: Relevance to zinc binding sites in zinc fingers

Mixed ligand complexes of Zn(II) and Co(II) with cysteine, histidine, cysteinemethylester, and histidinemethylester have been synthesized and characterized by elemental analysis, conductivity, magnetic susceptibility measurements, and infrared,¹H NMR, TGA and FAB mass spectra. In these complexes, histidine, and histidinemethylester act as bidentate ligands involving amino and imidazole nitrogens in metal coordination. Similarly, cysteine, and cysteinemethylester also act as bidentate ligands coordinating through thiol sulphur and amino nitrogen. Tetrahedral geometry has been proposed for Zn(II) and Co(II) complexes based on experimental evidence.     

One- and two-photon induced emission in heterobimetallic Zn(II)-Sm(III) and Zn(II)-Tb(III) complexes with a side-off compartmental ligand

Heterobimetallic [Zn(II)Ln(III)] complexes have been obtained using a compartmental Schiff-base ligand, H(2)valdmpn, resulting from the 2:1 condensation between o-vanillin and 2,2-dimethyl-propilenediamine: [Zn(H(2)O)(valdmpn)Sm(O(2)NO)(3)] 1, [Zn(H(2)O)(valdmpn)Tb(O(2)NO)(3)] 2a, [Zn(H(2)O)(valdmpn)Tb(O(2)NO)(3)]·H(2)O 2b, and [Zn(H(2)O)(valdmpn)Gd(O(2)NO)(3)]·H(2)O 3. The crystal structures of 1, 2b, and 3 have been solved. Compounds 1 and 2a crystallize in a non-centrosymmetric space group (P2(1)2(1)2(1)), being isomorphous. Crystals 2b and 3 are also isomorphous (space group P1[combining macron]). The complex entities in the four crystals are similar and their structures consist of binuclear species with the pentacoordinated zinc(II) ion hosted into the N(2)O(2) compartment and the lanthanide(III) ion in the large, open compartment, with a coordination number of 10. The photophysical properties of the four compounds have been investigated. Strong visible excited (excitation tails extend up to 420-430 nm) one photon antenna sensitization was obtained with the samarium(III) and terbium(III) derivatives. Following femtosecond Ti:Sapphire laser at λ(ex) = 775 nm, both second-harmonic generation at λ(em) = 775/2 nm and two-photon induced emission in the VIS range were obtained, extending thus the excitation range of these complexes from the VIS to the NIR spectral range. The two-photon induced emission and second harmonic generation effect for a samarium(III) complex are reported for the first time.     

Synthesis,pyrolytic and bioassay studies of complexes Ni(II), Cu(II) and Zn(II) bromides with a chelating ligand of N,N donor sites

Coordination complexes of modified hydrazine are prepared with Ni(II), Cu(II), and Zn(II) metal ions. The ligand is synthesized by removing the methoxy moiety of methyl anthranilate with nitrogen of hydrazine hydrate, creating new coordination site. The coordination complexes are synthesized by reacting the ABH ligand with dehydrated M(II) [Cu²⁺, Zn²⁺ and Ni²⁺] bromide in an inert environment. The structures of the coordination complexes are elucidated basing on the physical measurements including elemental analysis, NMR, IR, UV–Vis spectra, magnetic and conductance measurements. These results reflect the M(ABH)Br₂ composition of the corresponding complexes. Thermal studies show the Irving William trend for the stability of complexes. Antibacterial activities and antifungal studies are also carried out in order to investigate the biological activity upon complexation.     

Iron(II) and zinc(II) complexes with designed pybox ligand for asymmetric aqueous Mukaiyama-aldol reactions

An iron(II) complex with a hindered hydroxyethyl-pybox (he-pybox) ligand shows improved catalytic activity and enantioselectivity for asymmetric Mukaiyama-aldol reactions in aqueous media. This water-stable chiral Lewis acid promotes condensation of aromatic silyl enol ethers with a range of aldehydes with good yields, excellent syn-diastereoselectivity and up to 92% ee. The combination of the same ligand with ZnII salt is also demonstrated as a remarkably efficient and water-compatible chiral Lewis acid.     

Co(II), Cu(II) and Zn(II) dinuclear complexes of a polypodal ligand containing phenolate and pyridyl donor groups

Acetate and perchlorate dinuclear metal complexes of Co(II), Cu(II) and Zn(II) with the cresolate polypodal ligand having mixed phenolate and pyridyl pendant functionalities, H₃L, have been synthesized. The complexes were characterized by microanalysis, LSI mass spectrometry, IR, UV–Vis spectroscopy, magnetic studies and conductivity measurements. Crystal structures of H₃L, [Cu₂(HL)(OAc)(H₂O)₂](OAc)·1.5H₂O and [Zn₂L(CH₃OH)₃](ClO₄)CH₃OH·2H₂O complexes, have been also determined.     

Synthesis and characterization of a Zn(II) complex of a pyrazole-based ligand bearing a chiral l-alaninemethylester

Reaction of ZnCl₂ with a new ligand N,N-bis(3,5-dimethylpyrazolylmethyl)-l-alaninemethylester (bdmpame) in methanol gives [ZnCl₂(bdmpame)]. The structure of [ZnCl₂(bdmpame)]·CH₂Cl₂ has been resolved by X-ray crystallographic analysis. The Zn atom has a distorted tetrahedral geometry involving a nitrogen atom from each pyrazole in bdmpame and two chloro ligands with bond lengths in the range 2.037(4)–2.237(2) Å. The nitrogen atom of the l-alaninemethylester group in the compound was not coordinated to the metal center, giving an eight-membered ring in which the nitrogen atoms of each pyrazole in bdmpame are coordinated to the metal center. The results of the catalytic enantioselective reduction of acetophenone promoted by ligand/Zn(OTf)₂=1:1 mole ratio in the presence of catecholborane for 48 h at 0°C gives (S)-(−)-1-phenylethanol in 21% ee with 68% yield.     

Synthesis,characterization and fluorescence spectra of mixed ligand Zn(II), Cd(II) and Hg(II) complexes with 1,10-phenanthroline-5,6-dione ligand

The novel mixed ligand complexes [M(bpy)(phen-dione)](PF₆)₂ (M?=?Zn(II), Cd(II) and Hg(II), bpy?=?2,2^′-bipyridine and phen-dione?=?1,10-phenanthroline-5,6-dione) have been synthesized and characterized by elemental analysis, IR, ¹H NMR and electronic absorption spectroscopies. The ν(C=O) of coordinated phen-dione in these complexes are very similar to the free phen-dione ligand showing that phen-dione is not coordinated to metal ion from its C=O sites. Absorption spectra of the complexes show two absorption bands for intraligand transitions. These absorption bands show dependence to the dielectric constant of solvent. These complexes exhibit an intensive fluorescence band around 535?nm in DMF when the excitation wavelength is 260?nm at room temperature. The fluorescence intensity of these complexes is larger than that of the free ligand.     

Ternary chelates of Zn(II) with some biological active ligands

The mixed-ligand chelates of Zn(II) with aminobutanedioic (aspartic), 2-aminopropanedioic (glutamic), pyridine 2,3-dicarboxylic (quinolinic), pyridine 2,6 dicarboxylic (diplicolinic), mercapto butanedioic (thiomalic) and thiodiacetic (thiodiglycolic), acids have been investigated potentiometrically at 30°C and 0.1 M (NaClO₄) ionic strength. The mixed-ligand chelate is formed by a stepwise equilibria when quinolinic and dipicolinic acids are used as primary ligands. The mixed-ligand chelate formation is occured in aspartic-thiomalic, aspartic-thiodiglycolic, glutamic-thiomalic, glutamic-thiodiglycolic acid systems by simultaneous equilibrium. The high stability of mixed-ligand chelate is explained on the considerations of structural aspects. It is concluded that in the mixed-ligand chelation, the coordination number six of Zn(II) is fulfilled.     

A novel imidazolate-bridged heterodinuclear Cu(II)Zn(II) complex derived from a unique macrocyclic ligand with two hydroxyethyl pendants

[(CuimZnL-2H)(CuimZnL-H)](ClO4)3, the first imidazolate-bridged Cu(II)-Zn(II) complex of a unique single macrocyclic ligand with two flexible hydroxyethyl pendants, L (L = 3,6,9,16,19,22-hexaaza-6,19-bis(2-hydroxyethyl)tricyclo[22.2.2.2(11,14)]triaconta-1,11,13,24,27,29-hexaene) has been obtained, in which the macrocyclic ligand with two hydroxyethyl arms possesses a markedly different conformation compared to its dicopper analogue.     

Diastereopure Fe(II) and Zn(II) complexes derived from a tridentate N,N',N-bis(methyl-L-prolinate)-substituted pyridine ligand

A series of mononuclear iron(II) and zinc(II) complexes of the new chiral Py(ProMe)2 ligand (Py(ProMe)2 = 2,6-bis[[(S)-2-(methyloxycarbonyl)-1-pyrrolidinyl]methyl]pyridine) have been prepared. The molecular geometry in the solid state (X-ray crystal structures) of the complexes [FeCl2(Py(ProMe)2)] (1), [ZnCl2(Py(ProMe)2)] (2), [Fe(OTf)2(Py(ProMe)2)] (3), [Fe(Py(ProMe)2)(OH2)2](OTf)2 (4), and [Zn(OTf)(Py(ProMe)2)](OTf) (5) are reported. They all show a meridional NN'N coordination of the Py(ProMe)2 ligand. The bis-chloride derivatives 1 and 2 represent neutral isostructural five-coordinated complexes with a distorted geometry around the metal center. Unusual seven-coordinate iron(II) complexes 3 and 4 having a pentagonal bipyramidal geometry were obtained using weakly coordinating triflate anions. The reaction of Zn(OTf)2 with the Py(ProMe)2 ligand afforded complex 5 with a distorted octahedral geometry around the zinc center. All complexes were formed as single diastereoisomers. In the case of complexes 3-5, the oxygen atoms of both carbonyl groups of the ligand are also coordinated to the metal. The stereochemistry of the coordinated tertiary amine donors in complexes 3-5 is of opposite configuration as in complexes 1 and 2 as a result of the planar penta-coordination of the ligand Py(ProMe)2. Complexes 1, 2, and 5 have an overall -configuration at their metal center, while the Fe(II) ion in complexes 3 and 4 has the opposite delta-configuration (crystal structures and CD measurements). The magnetic moments of iron complexes 1, 3, and 4 correspond to that of high-spin d6 Fe(II) complexes. The solution structures of complexes 1-5 were characterized by means of UV-vis, IR, conductivity, and CD measurements and their electrochemical behavior. These studies showed that the coordination environment of 1 and 2 observed in the solid state is maintained in solution. In coordinating solvents, the triflate anion (3, 5) or water (4) co-ligands of complexes 3-5 are replaced by solvent molecules with retention of the original pentagonal bipyramidal and octahedral geometry, respectively.     

Response of a designed metalloprotein to changes in metal ion coordination, exogenous ligands, and active site volume determined by X-ray crystallography

The de novo protein DF1 is a minimal model for diiron and dimanganese metalloproteins, such as soluble methane monooxygenase. DF1 is a homodimeric four-helix bundle whose dinuclear center is formed by two bridging Glu side chains, two chelating Glu side chains, and two monodentate His ligands. Here, we report the di-Mn(II) and di-Co(II) derivatives of variants of this protein. Together with previously solved structures, 23 crystallographically independent four-helix bundle structures of DF1 variants have been determined, which differ in the bound metal ions and size of the active site cavity. For the di-Mn(II) derivatives, as the size of the cavity increases, the number and polarity of exogenous ligands increases. This collection of structures was analyzed to determine the relationship between protein conformation and the geometry of the active site. The primary mode of backbone movement involves a coordinated tilting and sliding of the first helix in the helix-loop-helix motif. Sliding depends on crystal-packing forces, the steric bulk of a critical residue that determines the dimensions of the active site access cavity, and the intermetal distance. Additionally, a torsional motion of the bridging carboxylates modulates the intermetal distance. This analysis provides a critical evaluation of how conformation, flexibility, and active site accessibility affect the geometry and ligand-binding properties of a metal center. The geometric parameters defining the DF structures were compared to natural diiron proteins; DF proteins have a restricted active site cavity, which may have implications for substrate recognition and chemical stability.     

Thermal, spectral, magnetic and antimicrobial behaviour of new Ni(II), Cu(II) and Zn(II) complexes with a hexaazamacrocyclic ligand

New species of type MLCl₂·nH₂O (M:Ni, n = 6; M:Cu, n = 1.5 and M:Zn, n = 1; L: 1,8-bis(3′-ketopyridil)-1,3,6,8,10,13-hexaazacyclotetradecane, ligand resulted by 1,2-diaminoethane, nicotinamide and formaldehyde template condensation) were synthesised. The compounds were characterised by chemical analysis, ESI–MS, IR, NMR, UV–Vis-NIR and EPR spectroscopy as well as magnetic data at room temperature. The modifications in the IR and NMR spectra are in accordance with the condensation process. Electronic spectra indicate that Ni(II) adopts an octahedral stereochemistry while the surrounding of Cu(II) is square-pyramidal. The proposed stereochemistry was furthermore confirmed by magnetic moments and EPR spectrum at room temperature. The water is eliminated in one or two steps, respectively, while the oxidative degradation of the ligand and chloride decomposition occur in two steps. The final residues consist of the most stable metallic oxides as X-ray powder diffraction indicates. The newly synthesised compounds were evaluated for their antimicrobial effect against different bacterial and fungal strains.     

Synthesis and photoluminescent properties of a Schiff-base ligand and its mononuclear Zn(II), Cd(II), Cu(II), Ni(II) and Pd(II) metal complexes

Mononuclear Zn(II), Cd(II), Cu(II), Ni(II) and Pd(II) metal complexes of Schiff-base ligand(HL₁) derived from 8-acetyl-7-hydroxycoumarin and P-phenylenediamine were prepared and characterized by microanalytical, mass, UV–Vis, IR, ¹H NMR, ¹³C NMR, ESR, conductance and fluorescence studies. The measured low molar conductance values in DMSO indicate that the complexes are non-electrolytes. The structures of the solid complexes under study are established by using IR, electronic and ESR spectroscopy suggesting that Zn(II) and Ni(II) complexes are octahedral, Cd(II) complex is tetrahedral, Cu(II) and Pd(II) complexes are square planar. The ESR spectrum of the Cu(II) complex in DMSO at 298 and 150 K was recorded and its salient features are reported, it supports the mononuclear structure. The Schiff base exhibited photoluminescence originating from intraligand (π–π*) transitions. Metal-mediated enhancement is observed on complexation of HL with Zn(II) and Cd(II), whereas metal-mediated fluorescence quenching occurs in Cu(II), Ni(II) and Pd(II).     

An unprecedented "linear-bent" isomerism in tri-nuclear Cu(2)(II)Zn(II) complexes with a salen type di-Schiff base ligand

Two new trinuclear hetero-metallic copper(ii)-zinc(ii) complexes [(CuL)(2)Zn(N(3))(2)] ( and ) have been synthesized using [CuL] as a so-called "metalloligand" (where H(2)L = N,N'-bis(salicylidene)-1,3-propanediamine) and structurally characterized. Complexes and have the same molecular formula but crystallize in different crystal systems (triclinic for and monoclinic for ) with space group P1[combining macron] for and P2(1)/c for . is an angular trinuclear species, in which two terminal four-coordinate square planar "metalloligand" [CuL] are coordinated to a central Zn(ii) through double phenoxido bridges. The Zn(ii) is in a six-coordinate distorted octahedral environment being bonded additionally to two mutually cis nitrogen atoms of terminal azide ions. In complex , in addition to the double phenoxido bridge, the two terminal Cu(ii) ions are linked to the central Zn(ii) via a μ(-l,l) azido bridge giving rise to a square pyramidal environment around the Cu(ii) ions and consequently the structure becomes linear. These two species can be considered as "linear-bent" isomers. EPR spectra and ESI mass spectra show that the two isomers are identical in solution. The DFT calculation reveals that the energy of is 7.06 kcal mol(-1) higher than that of . The existence of both isomers in the solid state suggests that crystal packing interactions in are more efficient and probably compensate for the difference in energy.     

Mn (II) and Zn (II) complexes of a benzimidazole ligand having undecyl chains: Crystal structures,photophysical and thermal properties

A new tridentate benzimidazole ligand (L‐C¹¹) containing undecyl chains and its Mn (II) and Zn (II) complexes were synthesised and characterized by spectroscopic and analytical methods. Molecular structures of complexes [Mn(L‐C¹¹)Cl₂] and [Zn(L‐C¹¹)Cl₂] were evaluated by X‐ray diffraction studies. The X‐ray data showed metal ions in both complexes are five‐coordinate with distorted square pyramidal geometry around the metal centres. The undecyl chains in the structure of the complexes are aligned in an interdigitated manner (head to tail) forming a non‐polar domain. The aggregation properties of the ligand and its complexes were investigated by UV–Vis. absorption and emission spectroscopies in DMF‐water mixtures. The emission spectral data revealed that the compounds showed aggregation induced quenching (AIQ) in DMF‐water solutions. Moreover, thermal properties of the compounds were investigated by TG, DTG and DSC analysis.     

The mixed ligand complexes of Co(II), Ni(II), Cu(II) and Zn(II) with coumarilic acid/1,10-phenanthroline

Journal of Thermal Analysis and Calorimetry - The coumarilate (coum?) and 1,10-phenanthroline (phen) mixed ligand complexes of Co(II) (1), Ni(II) (2) Cu(II) (3) and Zn(II) (4) were...     

Structural features of mono- and tri-nuclear Zn(II) complexes with a non-steroidal anti-inflammatory drug as ligand

The interaction of Zn(II) with the non-steroidal anti-inflammatory drug tolfenamic acid leads to the formation of the structurally characterized trinuclear [Zn(3)(tolfenamato)(6)(CH(3)OH)(2)] complex. In the presence of the N,N'-donor heterocyclic ligands 1,10-phenanthroline and 2,2'-bipyridine at a range of ratios, the mononuclear Zn complexes of the general formulae [Zn(tolfenamato)(N,N'-donor)Cl] and [Zn(tolfenamato)(2)(N,N'-donor)] have been isolated and structurally characterized by X-ray crystallography. The deprotonated tolfenamato ligands are coordinated to the Zn(II) ion through carboxylato oxygen atoms. Tolfenamic acid and its complexes exhibit good binding propensity to human or bovine serum albumin protein having relatively high binding constant values.