Spectroscopic, electronic structure and natural bond orbital analysis of o-fluoronitrobenzene and p-fluoronitrobenzene: a comparative study

Experimental FTIR, FT-Raman and FT-NMR spectroscopic studies of o-fluoronitrobenzene and p-fluoronitrobenzene have been carried out. A detailed quantum chemical calculations have been performed using DFT/B3LYP method with 6-311++G** and 6-31G** basis sets. Complete vibrational analyses of the compounds were performed. The temperature dependence of thermodynamic properties has been analysed. The atomic charges, electronic exchange interaction and charge delocalisation of the molecule have been performed by natural bond orbital (NBO) analysis. Molecular electrostatic surface potential (MESP), total electron density distribution and frontier molecular orbitals (FMOs) are constructed at B3LYP/6-311++G** level to understand the electronic properties. The charge density distribution and site of chemical reactivity of the molecules have been obtained by mapping electron density isosurface with electrostatic potential surfaces (ESP). The electronic properties, HOMO and LUMO energies were measured by time-dependent TD-DFT approach. (1)H and (13)C NMR spectra were recorded and (1)H and (13)C nuclear magnetic resonance chemical shifts of the molecule were calculated. The (1)H and (13)C nuclear magnetic resonance (NMR) chemical shifts of the molecules in chloroform solvent and in gas phase were calculated by using the Gauge-Independent Atomic Orbital (GIAO) method and are found to be in good agreement with experimental values. The theoretical parameters obtained at B3LYP levels have been compared with the experimental values.     

FT-IR, FT-Raman, ab initio and DFT structural, vibrational frequency and HOMO-LUMO analysis of 1-naphthaleneacetic acid methyl ester

In this work, the FT-IR and FT-Raman spectra of 1-naphthaleneacetic acid methyl ester (abbreviated as 1-NAAME, C₁₀H₇CH₂CO₂CH₃) have been recorded in the region 3600–10 cm⁻¹. The optimum molecular geometry, normal mode wavenumbers, infrared and Raman intensities, Raman scattering activities, corresponding vibrational assignments, Mullikan atomic charges and other thermo-dynamical parameters were investigated with the help of HF and B3LYP (DFT) method using 6-31G(d,p), 6-311G(d,p) basis sets. Reliable vibrational assignments were made on the basis of total energy distribution (TED) calculated with scaled quantum mechanical (SQM) method. From the calculations, the molecules are predicted to exist predominantly as the C1 conformer. The correlation equations between heat capacity, entropy, enthalpy changes and temperatures were fitted by quadratic formulae. Lower value in the HOMO and LUMO energy gap explains the eventual charge transfer interactions taking place within the molecule. UV–VIS spectral analyses of 1NAAME have been researched by theoretical calculations. In order to understand electronic transitions of the compound, TD-DFT calculations on electronic absorption spectra in gas phase and solvent (DMSO and chloroform) were performed. The calculated frontier orbital energies, absorption wavelengths (λ), oscillator strengths (f) and excitation energies (E) for gas phase and solvent (DMSO and chloroform) are also illustrated.     

Electronic and Chemical Characterization of Aluminum–Nitrogen (AlN) Substituted Fullerenes: C58AlN to C24Al12N12

Density functional theory calculations (B3LYP/6-311G*) are applied to devise a series of AlN-substituted C₆₀ fullerenes, avoiding weak homonuclear Al–Al and N–N bonds. The substitutional structures, energy gaps between the highest occupied molecular orbital and the lowest unoccupied molecular orbital, ionization potentials, binding energies, as well as dipole moments have been systematically investigated. The band gap (HOMO–LUMO gap) is larger for all the AlN-substituted fullerenes than C₆₀. The properties of heterofullerenes, especially, the HOMO–LUMO strongly depend on the number of AlN units. Natural charge analyses indicate that doping of fullerene with AlN units exerts electronic environment diversity to the cage. High charge transfer on the surfaces of our heterofullerenes provokes more studies on their possible application for hydrogen storage.     

A comparative spectroscopic,electronic structure and chemical shift investigations of o-Chloronitrobenzene,p-Chloronitrobenzene and m-Chloronitrobenzene

The structural characteristics and substituent effects of o-Chloronitrobenzene, m-Chloronitrobenzene and p-Chloronitrobenzene have been analysed by experimental FTIR, FT-Raman and FT-NMR spectroscopic studies. A detailed quantum chemical calculations have been performed using DFT/B3LYP method with 6-311++G^**, 6-31G^** and cc-pVTZ basis sets. Complete vibrational analyses of the compounds were performed. The temperature dependence of thermodynamic properties has been analysed. The atomic charges and charge delocalisation of the molecule have been performed by natural bond orbital (NBO) analysis. Molecular electrostatic surface potential (MESP), total electron density distribution and frontier molecular orbitals (FMOs) are constructed at B3LYP/6-311++G^** level to understand the electronic properties. The charge density distribution and site of chemical reactivity of the molecules has been obtained by mapping electron density isosurface with electrostatic potential surfaces (ESPs). The electronic properties, HOMO and LUMO energies were measured by time-dependent TD-DFT approach. ¹H and ¹³C NMR spectra were recorded and ¹H and ¹³C nuclear magnetic resonance chemical shifts of the molecule were calculated. The ¹H and ¹³C nuclear magnetic resonance (NMR) chemical shifts of the molecules in chloroform solvent were calculated by using the Gauge-Independent Atomic Orbital (GIAO) method and are found to be in good agreement with experimental values.     

Synthesis,Characterization, and Computational Studies of Selenium Derivatives of 3,5‐Dichloropyridine

A methodology that can be tailored to incorporate selenium at the C‐2 or C‐4 position of 3,5‐dichloropyridine ( 1 ) was developed. For this, the lithiation of 1 with and without prior boron trifluoride complexation was utilized. The use of 1.3 equiv of LDA in the reaction did not give the desired product; however, the use of 2.3 equiv of LDA successfully inserted selenium into the C─Li bond. The observed regioselectivity in these reactions has been explained in light of relative stability of the lithiated species formed in dimethyl ether solution. Quantum chemical analysis was used to calculate the deprotonation energy and pK _a values and correlated with the observed regioselectivity. Theoretical analysis (B3LYP/6‐311++G(d,p)) of the synthesized compounds was performed to predict the effect of structural variations on the molecular properties of pyridylselenium derivatives. Various thermodynamic parameters and HOMO‐LUMO energies in the gas and solvent phases were calculated. When compared with 1 , the insertion of selenium into a pyridine moiety drastically reduces the HOMO‐LUMO energy gap, which clearly explains photochemical liability of selenium‐containing pyridine derivatives. The ¹H‐ and ¹³C‐NMR chemical shifts were also calculated by using gauge‐including atomic orbital method, and the results were validated with the experimental data.     

Insight into the acidic behavior of oxazolidin-2-one,its thione and selone analogs through computational techniques

Deprotonation thermochemistry of Oxazolidin-2-one (OXA), Oxazolidine-2-thione (OXA-S), and Oxazolidine-2-selone (OXA-Se) has been studied in order to find the most acidic site and relative acidities of these heterocyclics at various sites. The deprotonation enthalpies at MP2/6-311++G**//MP2/6-31+G* and B3LYP/6-31+G* levels, while the free energies for deprotonation process and pKa values at B3LYP/6-31+G* level both in gas and aqueous phase (using PCM continuum model) of the anions of the three heterocyclics have been computed at 298 K. Calculated aqueous phase pKa values of OXA vary by ~6–7 units from the experimental aqueous phase pKa values of OXA and its derivatives. The deprotonation at the nitrogen is favored in OXA over the carbon atoms in contrast to the OXA-S and OXA-Se where in the deprotonation at the carbon attached to the nitrogen is most preferred. Deprotonation at this carbon induces an important C–O bond rupture in OXA-S and OXA-Se promoting an energetically favored ring-opening process. The finding offers a rare case when C–H acidity is able to dominate over the N–H acidity. In order to explain the relative stabilities, relative acidities and deprotonation enthalpies various characteristics of these molecules as well as their anions such as molecular electrostatic potential surface (MEP), frontier molecular orbital (FMO) features, chemical hardness, softness have been governed. The three dimensional MEP maps and HOMO–LUMO orbitals encompassing these molecules yield a reliable relative stability and reactivity (in terms of acidity) map displaying the most probable regions for deprotonation. The differential distribution of the electrostatic potential over the neutral and anionic species of OXA, OXA-S, and OXA-Se molecules is authentically reflected by HOMO–LUMO orbitals and NBO charge distribution analysis. The lone pair occupancies, second order delocalization energies for orbital interactions and the distribution of atomic charges over the entire molecular framework as obtained from natural bond orbital (NBO) analysis are found to faithfully replicate the predictions from the MEP maps and HOMO–LUMO band gaps in respect of explaining the relative stabilities and acidities in most of the cases. Good linear correlations have been obtained between HOMO–LUMO gap and pKa values in the aqueous phase for OXA and OXA-S molecules.     

Molecular structure, vibrational spectra and HOMO, LUMO analysis of yohimbine hydrochloride by density functional theory and ab initio Hartree-Fock calculations

Yohimbine hydrochloride (YHCl) is an aphrodisiac and promoted for erectile dysfunction, weight loss and depression. The optimized geometry, total energy, potential energy surface and vibrational wavenumbers of yohimbine hydrochloride have been determined using ab initio, Hartree–Fock (HF) and density functional theory (DFT/B3LYP) method with 6-311++G(d,p) basis set. A complete vibrational assignment is provided for the observed Raman and IR spectra of YHCl. The UV absorption spectrum was examined in ethanol solvent and compared with the calculated one in gas phase as well as in solvent environment (polarizable continuum model, PCM) using TD-DFT/6-31G basis set. These methods are proposed as a tool to be applied in the structural characterization of YHCl. The calculated highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) with frontier orbital gap are presented.     

Theoretical and experimental investigations of complexation with BF3.Et2O effects on electronic structures,energies and photophysical properties of Anil and tetraphenyl (hydroxyl) imidazol

The novel compounds (E)‐2‐(((4‐hydroxyphenyl)imino)methyl)phenol, Tetraphenyl (hydroxyl) imidazole and their corresponding Boron difluoride complexes were synthesized and characterized by spectroscopic techniques. Density functional theory calculations at B3LYP‐D3/6–311++G (d, p) level of theory were performed for the geometric parameters. The MEP surface studies were used to understand the behavior of molecules in terms of charge transfer and to determine how these molecules interact. We used the GIAO and the B3LYP‐D3 with a 6–311++ G (d, p) basis set to simulate the (¹H‐NMR and ¹⁹F‐NMR) and the IR spectra, respectively. The corresponding calculated results are in good agreement with the experimental data. The stability of the molecule arising from hyperconjugation interaction and charge delocalization were analyzed using NBO analysis. FMOs revealed the occurrence of charge transfer within the molecule. The complexation using BF₃.Et₂O was also found to have remarkable effects on the electrochemical properties of the studied molecules, where (b) and (d) present lower chemical stability, higher reactivity and higher polarizability than (a) and (c), respectively. Moreover, the energy gap of (a) and (c) decreased after complexation using BF₃.Et₂O, indicating the reliability of the electrochemical evaluation of LUMO and HOMO energy levels. These values are the factors explaining the possible charge transfer interaction within the molecule. The absorption and emission spectra of the model compound were also simulated and compared to experimental observations in the DMF solvent. The results of DFT calculations supported the structural and spectroscopic data and confirmed the structure modification of frontier molecular orbitals for BF₂ complexes as well as tunable potentials and energy levels.     

Molecular structure,conformational stability,energetic and intramolecular hydrogen bonding in ground,and electronic excited state of 3-mercapto propeneselenal

In the present work, a conformational analysis of 3-mercapto propeneselenal is performed using several computational methods, including DFT (B3LYP), MP2, and G2MP2. At the DFT and G2MP2 levels the most stable conformers of title compound are characterized by an extended backbone structure, minimizing the steric repulsions between the sulfur and selenium lone pairs. Two conformers exhibit hydrogen bonding. This feature, although not being the dominant factor in energetic terms, appears to be of foremost importance to define the geometry of the molecule. The influence of the solvent on the stability order of conformers and the strength of intramolecular hydrogen bonding was considered using the PCM, SCI–PCM, and IEF–PCM methods. The results of analysis by quantum theory of “Atoms in Molecules” and natural bond orbital method fairly support the DFT results. The calculated HOMO and LUMO energies showed that charge transfer occurs within the molecule. Further verification of the obtained transition state structures was implemented via intrinsic reaction coordinate analysis. Calculations of the ¹H NMR chemical shift at GIAO/B3LYP/6–311++G** levels of theory are also presented. The excited-state properties of intramolecular hydrogen bonding in hydrogen-bonded systems have been investigated theoretically using the time-dependent density functional theory method.     

The characterization of NMR shielding in monocyclic phosphines

The phenyl-substituted saturated monocyclic phosphines, PhP(CH₂)_n, n = 2–5, show an interesting variation in their phosphorus NMR shieldings. The shielding does not vary uniformly with ring size, but rather the smallest ring (n = 2) has the highest shielding while the next smallest (n = 3) has the lowest shielding. Hartree–Fock calculations in the gauge-including atomic orbital (GIAO) approach on the related hydrogen derivatives have reproduced this trend in shielding and allow a qualitative understanding of the experimental observations. With respect to the relatively unstrained n = 4,5 ring systems, the unusual behavior of the n = 2 and 3 molecules can be understood in terms of the differences in the highest occupied molecular orbital/lowest unoccupied molecular orbital (HOMO/LUMO) gaps and the p-character of the phosphorus lone pair. The HOMO/LUMO gap is largest for phosphirane (n = 2) but smallest in phosphetane (n = 3). The hybrid character of the lone pair in phosphirane (n = 2) is almost sp while that for phosphetane (n = 3) is essentially sp². © 1997 John Wiley & Sons, Inc. Heteroatom Chem 8: 451–457, 1997     

Phthalocyanine‐Based Organometallic Nanocages: Properties and Gas Storage

Phthalocyanine (Pc) molecules are well‐known flexible structural units for 1D nanotubes and 2D nanosheets. First‐principles calculations combined with grand canonical Monte Carlo simulations are used to obtain the geometries, electronic structures, optical properties, and hydrogen‐storage capacities of nanocages consisting of six Pc molecules with six Mg or Ca atoms. The primitive Pc cage has T_h symmetry with twofold degeneracy in the highest occupied molecular orbital (HOMO), and threefold degeneracy in the lowest unoccupied molecular orbital (LUMO); the corresponding HOMO–LUMO gap is found to be 0.97 eV. The MgPc and CaPc cages have O_h symmetry with a HOMO–LUMO gap of 1.24 and 1.13 eV, respectively. Optical absorption spectra suggest that the Pc‐based cages can absorb infrared light, which is different from the visible‐light absorption in Pc molecules. We further show that the excess uptake of hydrogen on MgPc and CaPc cages at 298 K and 100 bar (1 bar=0.1 MPa) is about 3.49 and 4.74 wt %, respectively. The present study provides new insight into Pc‐based nanostructures with potential applications.     

Structures and electronic properties of C<Subscript>12</Subscript>Si<Subscript>8</Subscript>X<Subscript>8</Subscript> (X = H,F, and Cl)

The structural stabilities and electronic properties of C₁₂Si₈X₈ where X = H, F, and Cl are probed on the basis of density functional theory at the B3LYP/6-311++G**//B3LYP/6-31+G* level. Vibrational frequency calculations show that all the systems are true minima. The infrared spectra of the most stable C₁₂Si₈X₈ molecules are simulated to assist further experimental characterization. The functionalized structures and energy gaps between the highest occupied molecular orbital, HOMO, and the lowest unoccupied molecular orbital, LUMO, have been systematically investigated. It seems that C₁₂Si₈H₈ has more stability against electronic excitations via increasing the HOMO–LUMO gap comparing with C₁₂Si₈Cl₈ and C₁₂Si₈F₈. High charge transfer on the surfaces of our stable compounds, provokes further investigations on their possible application for hydrogen storage. The addition reaction energies of C₁₂Si₈X₈ are high exothermic, and C₁₂Si₈F₈ is more thermodynamically accessible.     

Spectroscopic investigations (FTIR,UV-VIS,NMR) and DFT calculations on the molecular structure of Nω-Nitro-L-arginine

The spectroscopic properties of N_ω-nitro-l-arginine were investigated by FT-IR, UV-VIS, and ¹H NMR spectra. Geometrical parameters and energies were calculated using the density functional theory (DFT) B3LYP method with the 6-311G basis set. Geometrical optimization of the molecule has been performed, vibrational spectra have been calculated, and fundamental vibrations have been determined from the total energy distribution (TED) of the vibrational modes. The HOMO-LUMO analysis is carried out for various electric fields (0.0–0.025 A^?1). The HOMO-LUMO gap is decreased while increasing the electric field. The calculated quantum chemical parameters are calculated and correlated to the inhibition efficiency, A Mullliken population was also important for determining local reactivity by indicating reactive centers and identifying potential nucleophilic and electrophilic attack sites. Charge transfer occurs inside the compound based on the HOMO LUMO gap. Calculations of DFT were evaluated in their ability to predict inhibition efficiency.     

Molecular structure, polarizability, hyperpolarizability analysis and spectroscopic characterization of 1-(chloromethyl)-2-methylnaphthalene with experimental (FT-IR and FT-Raman) techniques and quantum chemical calculations

In this work, the FT-IR and FT-Raman spectrum of 1-(chloromethyl)-2-methyl naphthalene (abbreviated as 1-ClM-2MN, C(12)H(11)Cl) have been recorded in the region 3600-10cm(-1). The optimum molecular geometry, normal mode wavenumbers, infrared and Raman intensities, Raman scattering activities, corresponding vibrational assignments, Mullikan atomic charges and thermo-dynamical parameters were investigated with the help of HF and B3LYP (DFT) method using 6-311G(d,p), 6-311++G(d,p) basis sets. Also, the dipole moment, linear polarizabilities, anisotropy, first and second hyperpolarizabilities values were also computed using the same basis set. Reliable vibrational assignments were made on the basis of total energy distribution (TED) calculated with scaled quantum mechanical (SQM) method. The correlation equations between heat capacities, entropies, enthalpy changes and temperatures were fitted by quadratic formulas. Lower value in the HOMO and LUMO energy gap explains the eventual charge transfer interactions taking place within the molecule. UV-vis spectral analysis of 1-ClM-2MN has been researched by theoretical calculations. In order to understand the electronic transitions of the compound, TD-DFT calculations on electronic absorption spectra in gas phase and solvent (DMSO and chloroform) were performed. The calculated frontier orbital energies, absorption wavelengths (λ), oscillator strengths (f) and excitation energies (E) for gas phase and solvent are also illustrated.     

Interfacial Behavior of Cysteine between Mild Steel and Sulfuric Acid as Corrosion Inhibitor

Interfacial behavior of cysteine (Cys) between mild steel and sulfuric acid solution as a corrosion inhibitor has been studied with electrochemical AC (alternating current) and DC (direct current) techniques at (25.0±0.1) °C. The AC impedance results were evaluated using equivalent circuits in which a constant phase element (CPE) has been replaced with double layer capacitance (C_dl) to represent the frequency distribution of experimental data. Changes in impedance parameters (charge transfer resistance and double layer capacitance) indicated that cysteine molecules acted by accumulating at the metal/solution interface. The fractional coverage of the metal surface () was determined using AC impedance results and it was found that the adsorption of cysteine on the mild steel surface followed a Langmuir isotherm model with a standard free energy of adsorption (ΔG⁰_ads) of −35.1 kJ·mol⁻¹.To clarify the type of interaction between mild steel surface and cysteine molecules with a molecular orbital approach, electronic properties, such as, the highest occupied molecular orbital (HOMO) energy, the lowest unoccupied molecular orbital (LUMO) energy, and the frontier molecular orbital coefficients have been calculated. Energy gaps for the interaction of mild steel surface and cysteine molecules (E_{LUMO Fe}−E_{HOMO Cys} and E_{LUMO Cys}−E_{HOMO Fe}) were used to determine whether cysteine molecules acted as electron donors or electron acceptors when they interacted with the mild steel surface. The local reactivity was evaluated through the condensed Fukui indices. Theoretical calculations were carried out using the density functional theory (DFT) at B3LYP level with the 6-311++G(d,p) basis set for all atoms by Gaussian 03W program.     

Syntheses,Spectroscopic and DFT Studies of Two New D‐π‐A Compounds

Two novel 1,3‐dithiole‐2‐ylidene derivatives with a push–pull structures, 3‐(4,5‐dicarbomethoxy‐1,3‐dithiol‐2‐ylidene)naphthopyranone 1 and 3‐(4,5‐dimethylthio‐1,3‐dithiol‐2‐ylidene)naphthopyranone 2 , have been synthesized and characterized by ¹H NMR, IR, MS. The UV–vis spectra of 1 , 2 in CH₂Cl₂, the lowest‐energy absorption bands, are centered at 280, 316, and 430 nm for 1 and 284, 317, and 450 nm for 2 , respectively, which are caused by the HOMO → LUMO single electron promotion. Furthermore, the steady‐state fluorescence originating states of 1 , 2 from the excited charge‐transfer were observed. To estimate the position and energies of frontier orbitals for 1 , 2 , DFT calculations were performed using the Gaussian 03 program at the B3LYP/6‐31 G* level. The calculated vertical excitation energies are in good agreement with the experimental data. The high HOMO–LUMO gaps of 1 (3.08 eV) and 2 (3.00 eV) indicate high kinetic stability of the title compounds.     

Synthesis,molecular conformation,vibrational, electronic transition,and chemical shift assignments of 4-(thiophene-3-ylmethoxy)phthalonitrile: a combined experimental and theoretical analysis

This work presents the synthesis and characterization of a novel compound, 4-(thiophene-3-ylmethoxy)phthalonitrile (TMP). The spectroscopic properties of the compound were examined by FT-IR, FT-Raman, NMR, and UV techniques. FT-IR and FT-Raman spectra in solid state were observed in the region 4000–400 cm⁻¹ and 3500–50 cm⁻¹, respectively. The ¹H and ¹³C NMR spectra were recorded in CDCl₃ solution. The UV absorption spectrum of the compound that dissolved in THF was recorded in the range of 200–800 nm. The structural and spectroscopic data of the molecule in the ground state were calculated using density functional theory (DFT) employing B3LYP exchange correlation and the 6-311++G(d,p) basis set. The vibrational wavenumbers were calculated and scaled values were compared with experimental FT-IR and FT-Raman spectra. The complete assignments were performed on the basis of the experimental results and total energy distribution (TED) of the vibrational modes, calculated with scaled quantum mechanics (SQM) method. Isotropic chemical shifts (¹³C NMR and ¹H NMR) were calculated using the gauge-invariant atomic orbital (GIAO) method. A study on the electronic properties, such as HOMO and LUMO energies, were performed by time-dependent DFT (TD-DFT) approach. The HOMO and LUMO analyses have been used to elucidate information regarding charge transfer within the molecule. Comparison of the calculated frequencies, NMR chemical shifts, absorption wavelengths with the experimental values revealed that DFT method produces good results.     

New materials based on thiazolothiazole and thiophene candidates for optoelectronic device applications: theoretical investigations

We report theoretical analysis on the geometries and electronic properties of new conjugated compounds based on thiazolothiazole synthesized by Ando et al. (Synth. Met., 156:327 [13]). The theoretical ground-state geometry and electronic structure of the studied molecules were investigated by the density functional theory (DFT) method at Becke’s three-parameter functional and Lee–Yang–Parr functional (B3LYP) level with 6-31G(d,p) basis set. The effects of the ring structure and the substituents on the geometries and electronic properties of these materials are discussed to investigate the relationship between molecular structure and optoelectronic properties. This investigation was used to drive further syntheses towards compounds more useful as active optoelectronic materials. Theoretical knowledge of the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) energy levels of the components is basic in studying organic solar cells, so the HOMO, LUMO, and gap energy V _oc (open-circuit voltage) of the studied compounds are calculated and discussed. These properties suggest these materials as good candidates for use in organic dye-sensitized solar cells.