Theoretical study on the atmospheric reaction of CH3O2 with OH

A quantum chemical investigation on the reaction mechanism of CH₃O₂ with OH has been performed. Based on B3LYP and QCISD(T) calculations, seven possible singlet pathways and seven possible triplet pathways have been found. On the singlet potential energy surface (PES), the most favorable channel starts with a barrierless addition of O atom to CH₃O₂ leading to CH₃OOOH and then the O? O bond dissociates to give out CH₃O + HO₂. On the triplet PES, the calculations indicate that the dominant products should be ³CH₂O₂ + H₂O with an energy barrier of 29.95 kJ/mol. The results obtained in this work enrich the theoretical information of the title reaction and provide guidance for analogous atmospheric chemistry reactions. © 2015 Wiley Periodicals, Inc.     

Decomposition of nitrous oxide on AlFe-PILC catalyst

Summary Two AlFe-PILC catalysts were prepared with different OH/metal ratio and applied in nitrous oxide (N₂O) decomposition reactions. The 100% conversion of N₂O with NH₃into N₂and H₂O was achieved below 500^oC with both applied catalysts. However, the activity of catalysts in direct conversion of N₂O into N₂and O₂did not exceed 40 % below 500^oC. In this reaction the activity of AlFe-PILC catalyst synthesized at higher OH/metal ratio (4) is higher compared to the activity of AlFe-PILC catalyst with OH/metal ratio (2). Free FeO·Fe₂O₃particles were registered in the AlFe-PILC catalyst with higher OH/metal ratio (4).     

煤炭燃烧过程中N2O消除反应机理的密度泛函理论研究

用密度泛函理论B3LYP方法对煤炭燃烧过程中N₂O的消除反应进行研究。选用6-311++G**和aug-cc-pVTZ基组,优化了反应通道上反应物、过渡态和产物的几何构型。预测了它们的热力学性质(总能量、焓、熵和吉布斯自由能)及其随温度的变化。预测N₂O+CO反应的活化能为200 kJ·mol^-1,与实验值193±8 kJ·mol^-1较一致。计算了500~1 800 K 温度范围的反应速率常数。在N₂O的分解中,N₂O与H和CN自由基的反应为动力学优先进行的反应,其活化能为50~55 kJ·mol^-1。在B3LYP/aug-cc-pVTZ level水平下,N₂O+CN反应是热力学最有利的自发反应,其吉布斯自由能变化为-407 kJ·mol^-1。     

Impact of greenhouse gas CO2 on the heterogeneous reaction of SO2 on alpha-Al2O3

The heterogeneous reaction of SO₂ on mineral dust surfaces is generally considered as an important chemical pathway for secondary sulfate formation in the troposphere. To this day, there are no reported studies that assess the impact of atmospheric CO₂ in sulfate production on mineral dust surfaces. In this work, we investigate the impact of CO₂ on SO₂ uptake on dust proxy aluminum oxide particles using a diffuse reflectance infrared Fourier transform spectroscopy (DRIFTS). CO₂ is demonstrated to suppress the heterogeneous oxidation of SO₂ on alpha-Al₂O₃. Compared to that measured in the CO₂-free case, the uptake coefficient is decreased by nearly 57% when Al₂O₃ particles are exposed to the gas flow with atmospheric CO₂ at a relative humidity (RH) of 25%. It is also found that there is a balance between the yield of active moiety −OH provided by Al(OH)₃(CO)(OH)₂ clusters and the loss of basic hydroxyl group on aluminum oxide surfaces blocked by CO₂-derived (bi)carbonate species. This work, for the first time, reveals a negative effect of atmospheric CO₂ on the sulfate formation, which potentially decreases solar-radiation scattering and further exacerbates global warming.     

HO2自由基与NO2反应通道的理论研究

应用密度泛函理论DFT/B3LYP对HO₂＋NO₂反应进行了研究, 在B3LYP/6-311G^**和CCSD(T)/6-311G^**水平上计算了HO₂自由基与NO₂分子反应的单重态和三重态反应势能面, 计算结果表明, 单重态反应势能面中的直接氢抽提反应机理是此反应的主要反应通道, 即HO₂自由基的氢原子转移到NO₂分子的氮原子上形成产物P₁ (HNO₂＋³O₂), 另一个可能的反应通道是单重态反应势能面上HO₂中的端位氧原子进攻NO₂分子中的氮原子形成中间体1 (HOONO₂), 接着中间体1 (HOONO₂)经过氢转移形成产物P₂ (trans-HONO＋³O₂), 以上两个反应通道都是放热反应通道, 分别放热90.14和132.52 kJ•mol^－1.     

Computational mechanistic study of methanol and molecular oxygen reaction on the triplet and singlet potential energy surfaces

The reaction of CH₃OH with the O₂ on the triplet and singlet potential energy surfaces (PES) was carried out using the B3LYP, MP2, and CCSD(T)//B3LYP theoretical approaches in connection with the 6-311++G(3df–3pd) basis set. Three pre-reactive complexes, ¹C1, ¹C2, and ³C1, on the singlet and triplet PES were formed between methanol and molecular oxygen. From a variety of the complexes, seven types of products are obtained, of which four types are found to be thermodynamically stable. Results reveal that there exists one intersystem crossing between triplet and singlet PES. For P4 adduct that is the main and kinetically the most favorable product, the rate constants are calculated in the temperature range of 200–1,000 K in the reliable pathway.     

H2 Formation on Cosmic Grain Siliceous Surfaces Grafted with Fe+: A Silsesquioxanes‐Based Computational Model

Cosmic siliceous dust grains are involved in the synthesis of H₂ in the inter‐stellar medium. In this work, the dust grain siliceous surface is represented by a hydrogen Fe‐metalla‐silsesquioxane model of general formula: [Fe(H₇Si₇O_12?n)(OH)_n]⁺ (n=0,1,2) where Fe⁺ behaves like a single‐site heterogeneous catalyst grafted on a siliceous surface synthesizing H₂ from H. A computational analysis is performed using two levels of theory (B3LYP‐D3BJ and MP2‐F12) to quantify the thermodynamic driving force of the reaction: [Fe‐T7H₇]⁺+4H→[Fe‐T7H₇(OH)₂]⁺+H₂. The general outcomes are: 1) H₂ synthesis is thermodynamically strongly favored; 2) Fe‐H / Fe‐H₂ barrier‐less formation potential; 3) chemisorbed H‐Fe leads to facile H₂ synthesis at 20≤T≤100 K; 4) relative spin energetics and thermodynamic quantities between the B3LYP‐D3BJ and MP2‐F12 levels of theory are in qualitative agreement. The metalla‐silsesquioxane model shows how Fe⁺ fixed on a siliceous surface can potentially catalyze H₂ formation in space.     

A barrier‐free atomic radical‐molecule reaction: N (2D) NO2 (2A1) mechanistic study

The reaction of N (²D) radical with NO₂ molecule has been studied theoretically using density functional theory and ab initio quantum chemistry method. Singlet electronic state [N₂O₂] potential energy surfaces (PES) are calculated at the CCSD(T)/aug‐cc‐pVDZ//B3LYP/6‐311+G(d) + ZPE and G3B3 levels of theory. All the involved transition states for generation of (2NO) and (O₂ + N₂) lie much lower than the reactants. Thus, the novel reaction N + NO₂ can proceed effectively even at low temperatures and it is expected to play a role in both combustion and interstellar processes. On the basis of the analysis of the kinetics of all pathways through which the reactions proceed, we expect that the competitive power of reaction pathways may vary with experimental conditions for the title reaction. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Reaction of CH3O2 and HO2: Ab initio characterization of dimer structure and vibrational mode analysis for reaction mechanisms

All species involved in the multi‐channel reaction of CH₃O₂ with HO₂ have been investigated using density functional theory (DFT). The molecular geometries for various species are optimized employing the B3LYP method implementing the 6‐311++G** basis set. The relative energies of all species are calculated at the same level theory. The results show that there are two kinds of channels: singlet and triplet. The singlet channel involves four intermediates and six transition states. The triplet channel includes two intermediates and two transition states. There are four kinds of reaction products: CH₃OOH + ¹O₂, CH₃OH + O₃, CH₄ + 2O₂, and CH₃OOH + ³O₂. The vibrational mode analysis is used to elucidate the relationships of the intermediates, the transition states, and the products. The extensive investigation shows that the reaction mechanism is reliable. © 2005 Wiley Periodicals, Inc. Int J Quantum Chem, 2006     

Reaction of C2HCl2＋O2： Combined TR-FTIR Spectroscopy and Electronic Structure

The product channels and mechanisms of the C2HC12＋O2 reaction are investigated by step-scan time-resolved Fourier transform infrared emission spectroscopy and the G3MP2// B3LYP/6-311G（d,p） level of electronic structure calculations. Vibrationally excited products of HCI, CO, and CO2 are observed in the IR emission spectra and the product vibrational state distribution are determined which shows that HCI and CO are vibrationally excited with the nascent average vibrational energy estimated to be 59.8 and 51.8 kJ/mol respectively. In combination with the G3MP2//B3LYP/6-311G（d,p） calculations, the reaction mechanisms have been characterized and the energetically favorable reaction pathways have been suggested.     

Theoretical study of reactions of N2O with NO and OH radicals

The reactions of N₂O with NO and OH radicals have been studied using ab initio molecular orbital theory. The energetics and molecular parameters, calculated by the modified Gaussian-2 method (G2M), have been used to compute the reaction rate constants on the basis of the TST and RRKM theories. The reaction N₂O + NO → N₂ + NO₂ (1) was found to proceed by direct oxygen abstraction and to have a barrier of 47 kcal/mol. The theoretical rate constant, k₁ = 8.74 × 10⁻¹⁹ × T^2.23 exp (−23,292/T) cm³ molecule⁻¹ s⁻¹, is in close agreement with earlier estimates. The reaction of N₂O with OH at low temperatures and atmospheric pressure is slow and dominated by association, resulting in the HONNO intermediate. The calculated rate constant for 300 K ≤ T ≤ 500 K is lower by a few orders than the upper limits previously reported in the literature. At temperatures higher than 1000 K, the N₂O + OH reaction is dominated by the N₂ + O₂H channel, while the HNO + NO channel is slower by 2–3 orders of magnitude. The calculated rate constants at the temperature range of 1000–5000 K for N₂O + OH → N₂ + O₂H (2A) and N₂O + OH → HNO + NO (2B) are fitted by the following expressions: in units of cm³ molecule ⁻¹s⁻¹. Both N₂O + NO and N₂O + OH reactions are confirmed to enhance, albeit inefficiently, the N₂O decomposition by reducing its activation energy. © 1996 John Wiley & Sons, Inc.     

Criegee自由基CH2O2与H2O反应机理及动力学的理论研究

在6-311＋G(2d,2p)水平下, 采用密度泛函理论(DFT)的B3LYP方法, 研究了Criegee 自由基CH₂O₂与H₂O的反应. 结果表明反应存在三个通道: CH₂O₂＋H₂O®HOCH₂OOH (R1); CH₂O₂＋H₂O®HCO＋OH＋H₂O (R2); CH₂O₂＋H₂O®HCHO＋H₂O₂ (R3), 各通道的势垒高度分别为43.35, 85.30和125.85 kJ/mol. 298 K下主反应通道(R1)的经典过渡态理论(TST)与变分过渡态理论(CVT)的速率常数k^TST与k^CVT均为2.47×10^－17 cm³•molecule^－1•s^－1, 而经小曲率隧道效应模型(SCT)校正后的速率常数k^CVT/SCT为 5.22×10^－17 cm³•molecule^－1•s^－1. 另外, 还给出了200～2000 K 温度范围内拟合得到的速率常数随温度变化的三参数Arrhenius方程.     

A theoretical study on the elimination reaction of acrylonitrile from 2′-O-cyanoethylated nucleosides by Bu4NF

The elimination reaction of acrylonitrile from 2′-O-cyanoethylated nucleosides by Bu₄NF was studied computationally. The transition structures for the reaction of 3-methoxypropionitrile with Me₄NF were located at the MP2, B3LYP, and B3LYP-SCRF(Dipole) levels with 6-31 + G* basis set. The α-hydrogen of the cyano group was removed via a proton transfer from the α-carbon to the oxygen with a syn-periplanar arrangement rather than the deprotonation reaction with F^?. In the presence of an excess amount of Me₄NF, the activation energy decreased by the coordination of Me₄N⁺ to the cyano group. The reaction of 3-methoxypropionitrile with Bu₄NF and 2′-O-cyanoethylated uridine with Me₄NF also occurred via a proton transfer mechanism with lower activation energies. The reactivity tendency corresponds to the amount of the negative charge on the oxygen atom and part of the reason for the faster elimination with F^? rather than with DBU concerns entropy. The experimental results are well explained by these calculations.     

Quantum-chemical investigation of the mechanisms of oxidation of dimethyl sulfide by hydrogen peroxide and peroxoborates

It was established by the DFT method in the B3LYP/6-311G-d,p approximation that the oxidation of dimethyl sulfide (Me₂S) by peroxides (XOOH) can take place by two mechanisms depending on the nature of X. In the reaction of Me₂S with hydrogen peroxide (X = H) the direct reagent is the HOOH molecule while in the reactions with monoperoxoborate [X = B(OH)₃] and diperoxoborate [X = B(OH)₂OOH] it is a reagent containing the “water oxide” fragment X—(⁺OH)—O^–.     

Synthesis and crystal structure of 2‐amino‐3‐hydroxypyridinium dioxido(pyridine‐2,6‐dicarboxylato‐κ3O2,N,O6)vanadate(V) and its conversion to nanostructured V2O5

2‐Amino‐3‐hydroxypyridinium dioxido(pyridine‐2,6‐dicarboxylato‐κ³O²,N,O⁶)vanadate(V), (C₅H₇N₂O)[V(C₇H₃NO₄)O₂] or [H(amino‐3‐OH‐py)][VO₂(dipic)], (I), was prepared by the reaction of VCl₃ with dipicolinic acid (dipicH₂) and 2‐amino‐3‐hydroxypyridine (amino‐3‐OH‐py) in water. The compound was characterized by elemental analysis, IR spectroscopy and X‐ray structure analysis, and consists of an anionic [VO₂(dipic)]⁻ complex and an H(amino‐3‐OH‐py)⁺ counter‐cation. The V^V ion is five‐coordinated by one O,N,O′‐tridentate dipic dianionic ligand and by two oxide ligands. Thermal decomposition of (I) in the presence of polyethylene glycol led to the formation of nanoparticles of V₂O₅. Powder X‐ray diffraction (PXRD) and scanning electron microscopy (SEM) were used to characterize the structure and morphology of the synthesized powder.     

Computational study on the mechanism for the gas‐phase reaction of dimethyl disulfide with OH

The mechanisms for the reaction of CH₃SSCH₃ with OH radical are investigated at the QCISD(T)/6‐311++G(d,p)//B3LYP/6‐311++G(d,p) level of theory. Five channels have been obtained and six transition state structures have been located for the title reaction. The initial association between CH₃SSCH₃ and OH, which forms two low‐energy adducts named as CH₃S(OH)SCH₃ (IM1 and IM2), is confirmed to be a barrierless process, The S? S bond rupture and H? S bond formation of IM1 lead to the products P1(CH₃SH + CH₃SO) with a barrier height of 40.00 kJ mol^?1. The reaction energy of Path 1 is ?74.04 kJ mol^?1. P1 is the most abundant in view of both thermodynamics and dynamics. In addition, IMs can lead to the products P2 (CH₃S + CH₃SOH), P3 (H₂O + CH₂S + CH₃S), P4 (CH₃ + CH₃SSOH), and P5 (CH₄ + CH₃SSO) by addition‐elimination or hydrogen abstraction mechanism. All products are thermodynamically favorable except for P4 (CH₃ + CH₃SSOH). The reaction energies of Path 2, Path 3, Path 4, and Path 5 are ?28.42, ?46.90, 28.03, and ?89.47 kJ mol^?1, respectively. Path 5 is the least favorable channel despite its largest exothermicity (?89.47 kJ mol^?1) because this process must undergo two barriers of TS5 (109.0 kJ mol^?1) and TS6 (25.49 kJ mol^?1). Hopefully, the results presented in this study may provide helpful information on deep insight into the reaction mechanism. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

On The Nature of FeIV=Oaq in Aqueous Media: A DFT analysis

Fe^IV=O_aq is a key intermediate in many advanced oxidation processes and probably in biological systems. It is usually referred to as Fe^IV=O²⁺. The pKa's of Fe^IV=O_aq as derived by DFT are: pKa1=2.37 M06 L/6-311++G(d,p) (SDD for Fe) and pKa2=7.79 M06 L/6-311++G(d,p) (SDD for Fe). This means that in neutral solutions, Fe^IV=O_aq is a mixture of (H₂O)₄(OH)Fe^IV=O⁺ and (H₂O)₂(OH)₂Fe^IV=O. The oxidation potential of Fe^IV=O_aq in an acidic solution, E⁰{(H₂O)₅Fe^IV=O²⁺/Fe^III(H₂O)₆³⁺, pH 0.0} is calculated with and without a second solvation sphere and the recommended value is between 2.86 V (B3LYP/Def2-TZVP, with a second solvation sphere) and 2.23 V (M06 L/Def2-TZVP without a second solvation sphere). This means that Fe^IV=O_aq is the strongest oxidizing agent formed in systems involving Fe^VIO₄²⁻ even in neutral media.     

Oxidopolyborate chemistry: The self-assembled,templated, synthesis,and an XRD study of a 1-D coordination polymer, [Cu(en){B6O7(OH)6}].3H2O (en = 1,2-diaminoethane)

Abstract

[Cu(en){B₆O₇(OH)₆}]^.3H₂O (1) (en = 1,2-diaminoethane), obtained as a crystalline solid in low yield (31%) after prolonged standing of an aqueous solution initially containing [Cu(en)₂](OH)₂ and B(OH)₃ (1:7 ratio), was characterized by thermal analysis (TGA/DSC), ¹¹B NMR and IR spectroscopy, powder XRD, and single-crystal XRD studies, and magnetic susceptibility measurements. The single-crystal X-ray diffraction revealed that the oxidoborate complex is a 1D coordination polymer with the hexaborate(2-) ligand bridging two hexacoordinate Cu^(II) centers, in an alternating a fac-tridentate (κ³-O) and monodentate (κ¹-O) arrangement. Cu-O coordination bonds and extensive H-bonding networks promote and stabilize the self-assembly of [Cu(en){B₆O₇(OH)₆}]^.3H₂O from the Dynamic Combinatorial Libraries of available reactants. [Cu(en){B₆O₇(OH)₆}]^.3H₂O is thermally decomposed to CuB₆O₁₀ in air at 700?°C.     

Tetraphenylboroxinate(1-) salts of monoborate cations: Synthesis and single-crystal X-ray structures of [Ph2B{OCH2CH2N(Me)(CH2)n}2][Ph4B3O3] (n = 4, 5)

The salts, [Ph₂B{OCH₂CH₂N(Me)(CH₂)_n}₂][Ph₄B₃O₃] (n = 4, 5), were prepared in moderate yields in MeOH solution from reaction of Ph₂BOBPh₂ with [N(CH₂)_n(Me)(CH₂CH₂OH)][OH] and PhB(OH)₂ in a 1:2:4 ratio. The reactions also lead to Ph₃B₃O₃. Both salts were characterized by NMR (¹H, ¹³C, ¹¹B) IR, and single-crystal XRD studies. The salts are comprised of cationic monoborates (zwitterionic, 2N⁺ and 1B⁻) and tetraphenylboroxinate anions.     

Mechanism for hydrolysis of double six-membered ring tetraborate anion

[B₄O₅(OH)₄²⁻] is a representative borate anion with a double six-membered ring structure, but there is limited knowledge about the hydrolysis mechanisms of [B₄O₅(OH)₄²⁻]. Density functional theory-based calculations show that the tetraborate ion undergoes three-step hydrolysis to form [B(OH)₄⁻] and an ring intermediate, [B₃O₂(OH)₆⁻]. Other new structures, such as linear trimer, branched tetraborate, analogous linear tetraborate, are observed, but they are not stable in neutral systems and change to ring structures. [B₃O₂(OH)₆⁻] hydrolyzes to [B(OH)₄⁻] and [B(OH)₃] in the last two steps. The structure of borate anion and the coordination environment of the bridge oxygen atom control the hydrolysis process. [B₄O₅(OH)₄²⁻] always participates in the hydrolysis reaction, even with a decrease in concentration. [B₃O₃(OH)₄⁻], [B(OH)₄⁻], and [B(OH)₃] have different roles in “water-poor” and “water-rich” zones. Concentration and pH of solution are the key factors that affect the distribution of borate ions.