Hydrogen bonding and tautomeric equilibria of complexes of pyridine with various proton donors a nitrogen-15 nuclear magnetic resonance study

The¹⁵N-NMR-spectra of pyridine in presence of several proton donors are given. The concentration dependence of the chemical shifts can be described formally by a two step mechanism including proton transfer.

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Wasserstoffbrückenbindung und Protonenübertragung in Komplexen zwischen Pyridin und verschiedenen Protonendonatoren. Eine Stickstoff-15-NMR-Untersuchung

Zusammenfassung Die¹⁵N-NMR-Spektren von Pyridin mit einigen Protonendonatoren sind angegeben. Die Konzentrationsabhängigkeit der chemischen Verschiebung kann formal durch ein zweistufiges Gleichgewicht, welches einen Protonenübergang beinhaltet, beschrieben werden.

     

Evaluation of the origin of conformational and tautomeric preferences in N‐formylformamide – A quantum chemical study

Quantum chemical study of N‐formylformamide (NFF) was carried out at various theoretical levels and the determinate equilibrium conformations were recomputed at the high level ab initio methods such as G2MP2, G2, G3, and complete basis set (CBS)‐QB3. The computational results reveal that the amide resonance and intramolecular hydrogen bonding are two superior factors in determining the most stable conformation of diamide (DA) and amide–imidic (AI) acid tautomers, respectively. The evaluation of hydrogen bond energies predicts that the hydrogen bond (HB( strength of NFF is weaker than the malonaldehyde (MA). But the results of atoms in molecules (AIM(, natural bond orbital (NBO), and geometrical parameters are given a different order, E_HB(NFF) > E_HB(MA). Although the bond average energies of tautomerization process emphasized on more stability of AI tautomer, but our theoretical calculations reveal that the DA conformers are more stable than the AI ones. The population analyses of equilibrium conformations by NBO method also predict that the origin of tautomeric preference is mainly because of the electron delocalization of amide functional group, especially LP(N)→ π*_C?O charge transfer. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

Theoretical study of energies,structures, and vibrational spectra of the carbonic acid–hydroperoxy radical complexes

In this work, we present the results for the first time of our study on hydrogen‐bonded H₂CO₃–HO₂ complexes (structures 1, 2) by means of ab initio molecular orbital theory. These complexes are important intermediates in the reaction of the hydroperoxy radical and cabonic acid. We calculated that these structures are a six‐membered ring. We found that the binding energy of two complexes are 5.8 and 9.3 kcal/mol using the CCSD(T) method. We also calculated the vibrational and rotational frequencies for these complexes. © 2004 Wiley Periodicals, Inc. Int J Quantum Chem, 2005     

Systematic studies on the computation of nuclear magnetic resonance shielding constants and chemical shifts: the density functional models

We present a systematic density functional investigation on the prediction of the 13C, 15N, 17O, and 19F NMR properties of 23 molecules with 21 density functionals. Extensive comparisons are made for both 13C magnetic shieldings and chemical shifts with respect to the gas phase experimental data and the best CCSD(T) results. We find that the OPBE and OPW91 exchange-correlation functionals perform significantly better than some popular functionals such as B3LYP and PBE1PBE, even surpassing, in many cases, the standard wavefunction-based method MP2. Further analysis has been performed to explore the individual role played by various exchange and correlation functionals. We find that the B88 and PBE exchange functionals have a too strong tendency of deshielding, leading to too deshielded magnetic shielding constants; whereas the OPTX exchange functional performs remarkably well. We claim that the main source of error arises from the exchange functional, but correlation functional also makes important contribution. We find that the correlation functionals may be grouped into two classes. class A, such as LYP and B98, leads to deshielded NMR values, deteriorating the overall performance; whereas class B, such as PW91 and PBE, generally increases the absolute shieldings, which complements the exchange functionals, leading to improved results in the calculation of NMR data.     

QR‐SCMEH‐MO calculations on the complex [Pt (SnCl3)5]3−: Electronic structure,UV–visible spectrum,magnetic properties,and bond energy

A molecular orbital study via the QR‐SCMEH‐MO (quasi‐relativistic self consistent modified extended H?ckel molecular orbital) method has been carried out on the unusual Pt 5‐ coordinated complex Pt (SnCl₃). The computed UV–Visible spectral data and NMR parameters are found to be in good agreement with the reported experimental values. In addition, the magnetic susceptibility and Pt? Sn bond energy have been calculated, although there are no reported experimental data with which to compare these results. Pt? Sn bond energies of other Pt‐SnX₃ (X = Cl, Br) systems and are compared with proposed bond energy trends based on NMR and observed bond distances. © 2012 Wiley Periodicals, Inc.     

Self‐diffusion and interactions in mixtures of imidazolium bis(mandelato)borate ionic liquids with polyethylene glycol: 1H NMR study

We used ¹H nuclear magnetic resonance pulsed‐field gradient to study the self‐diffusion of polyethylene glycol (PEG) and ions in a mixture of PEG and imidazolium bis(mandelato)borate ionic liquids (ILs) at IL concentrations from 0 to 10 wt% and temperatures from 295 to 370 K. PEG behaves as a solvent for these ILs, allowing observation of separate lines in ¹H NMR spectra assigned to the cation and anion as well as to PEG. The diffusion coefficients of PEG, as well as the imidazolium cation and bis(mandelato)borate (BMB) anion, differ under all experimental conditions tested. This demonstrates that the IL in the mixture is present in at least a partially dissociated state, while the lifetimes of the associated states of the ions and ions with PEG are less than ~30 ms. Generally, increasing the concentration of the IL leads to a decrease in the diffusion coefficients of PEG and both ions. The diffusion coefficient of the anion is less than that of the cation; the molecular mass dependence of diffusion of ions can be described by the Stokes–Einstein model. NMR chemical shift alteration analysis showed that the presence of PEG changes mainly the chemical shifts of protons belonging to imidazole ring of the cation, while chemical shifts of protons of anions and PEG remain unchanged. This demonstrated that the imidazolium cation interacts mainly with PEG, which most probably occurs through the oxygen of PEG and the imidazole ring. The BMB anion does not strongly interact with PEG, but it may be indirectly affected by PEG through interaction with the cation, which directly interacts with PEG. Copyright © 2015 John Wiley & Sons, Ltd.     

Molecular dynamics and composition of crude oil by low‐field nuclear magnetic resonance

Nuclear magnetic resonance (NMR) techniques are widely used to identify pure substances and probe protein dynamics. Oil is a complex mixture composed of hydrocarbons, which have a wide range of molecular size distribution. Previous work show that empirical correlations of relaxation times and diffusion coefficients were found for simple alkane mixtures, and also the shape of the relaxation and diffusion distribution functions are related to the composition of the fluids. The 2D NMR is a promising qualitative evaluation method for oil composition. But uncertainty in the interpretation of crude oil indicated further study was required. In this research, the effect of each composition on relaxation distribution functions is analyzed in detail. We also suggest a new method for prediction of the rotational correlation time distribution of crude oil molecules using low field NMR (LF‐NMR) relaxation time distributions. A set of down‐hole NMR fluid analysis system is independently designed and developed for fluid measurement. We illustrate this with relaxation–relaxation correlation experiments and rotational correlation time distributions on a series of hydrocarbon mixtures that employ our laboratory‐designed downhole NMR fluid analyzer. The LF‐NMR is a useful tool for detecting oil composition and monitoring oil property changes. Copyright © 2016 John Wiley & Sons, Ltd.     

Intermolecular dynamics and paramagnetic properties of ethylenediaminetetraacetate complexes with the yttrium subgroup rare earth elements using nuclear magnetic resonance

¹H nuclear magnetic resonance (NMR) measurements are reported for the D₂O solutions of [Ln³⁺(EDTA^4?)]^? complexes, where EDTA^4? is ethylenediaminetetraacetate anion, Ln³⁺ = Tb³⁺ (I), Ho³⁺ (II), Tm³⁺ (III), Yb³⁺ (IV) and Lu³⁺ (V). Temperature dependencies of the ¹H NMR spectra of paramagnetic I–IV have been analyzed using the dynamic NMR methods. It is found that the activation free energies (ΔG^?₂₉₈ ) of the intermolecular EDTA ions exchange at [Ln³⁺(EDTA^4?)]^? complexes are 60±3 (I), 66±3 (II), 69±3 (III) and 74±3 (IV) kJ/mol (at pD = 7). A monotonic increase of the free energy of chemical exchange processes along the series of lanthanide [Ln³⁺ (EDTA^4?)]^? complexes is probably related to the lanthanide contraction. The obtained results indicate that coordination compounds I–IV may be considered as thermometric NMR sensors and lanthanide paramagnetic probes for in situ temperature control in solution. Copyright © 2012 John Wiley & Sons, Ltd.     

Comparisons of the interactions between two analytes and two structurally similar chiral stationary phases using high-performance liquid chromatography, suspended-state high-resolution magic angle spinning nuclear magnetic resonance and solid-state nuclear magnetic resonance spectroscopy

A study of the retention behaviour of the enantiomers (R)- and (S)-1,1'-binaphthyl-2,2'-diol as well as (+) and t-)-O,O'-dibenzoyl-tartaric acid was performed using the two chiral stationary phases (CSPs) Kromasil-DMB and Kromasil-TBB. Detailed information about the interactions between the analytes and the two CSPs was obtained from suspended-state HR/MAS transferred NOESY NMR experiments as well as suspended-state HR/MAS 1H NMR titration experiments. Good correlation between the suspended-state HR/MAS NMR experiments and the corresponding HPLC experiments was obtained. This shows that suspended-state HR/MAS NMR as well as solid-state CP/MAS NMR spectroscopy can be used to investigate interactions between stationary phases and analytes under conditions that are similar to those used in HPLC.     

Hadamard Homonuclear Broadband Decoupled TOCSY NMR: Improved Efficacy in Detecting Long‐range Chemical Shift Correlations

The importance of Hadamard encoding pulses in one‐dimensional pure shift yielded by the chirp excitation version of selective total correlation spectroscopy (1D PSYCHE–TOCSY) experiments is discussed for chemical‐shift analysis of complex natural products at ultrahigh resolution. Herein, we adapted H_n Hadamard matrices to 1D PSYCHE–TOCSY and observed an overall circa square root of n‐fold enhancement in the signal‐to‐noise (S/N) ratio when compared to conventional 1D PSYCHE–TOCSY recorded by refocusing only one spin at a time. This enhancement in S/N facilitates the observation of very weak long‐range chemical‐shift correlations from Hadamard‐encoded PSYCHE–TOCSY (HE–PSYCHE–TOCSY). The proposed method will have a significant impact on structure determination of complex isolated/ synthetic natural products.     

Dynamic nuclear polarization studies of nitroxyl spin probes in agarose gel using Overhauser‐enhanced magnetic resonance imaging

Agarose is a tissue‐equivalent material and its imaging characteristics similar to those of real tissues. Hence, the dynamic nuclear polarization studies of 3‐carboxy‐2,2,5,5‐tetramethyl‐pyrrolidine‐1‐oxyl (carboxy‐PROXYL) in agarose gel were carried out. The dynamic nuclear polarization parameters such as spin lattice relaxation time, longitudinal relaxivity, leakage factor, saturation parameter and coupling parameter were estimated for 2 mM carboxy‐PROXYL in phosphate‐buffered saline solution and water/agarose mixture (99 : 1). From these results, the spin probe concentration was optimized as 2 mM, and the reduction in enhancement was observed for carboxy‐PROXYL in water/agarose mixture (99 : 1) compared with phosphate‐buffered saline solution. Phantom imaging was also performed with 2 mM concentration of carboxy‐PROXYL in various concentrations of agarose gel at various radio frequency power levels. The results from the dynamic nuclear polarization measurements agree well with the phantom imaging results. These results pave the way for designing model system for human tissues suited to the biological applications of electron spin resonance/Overhauser‐enhanced magnetic resonance imaging.     

NQR and NMR study of hydrogen bonding interactions in anhydrous and monohydrated guanine cluster model: A computational study

In this paper extensive systematic computational study has been carried out to justify hydrogen bonding interactions and their influence on the oxygen, nitrogen and hydrogen NQR and NMR parameters of the anhydrous and monohydrated guanine crystal structures at two different levels, B3LYP and MP2, using 6-311++G** and D95** basis sets. These theoretical data have been compared with experimental NMR and NQR measurements. For further investigation, results of cluster calculation have been compared with that of a single molecule. Our theoretical NQR and NMR parameters of ¹⁷O, ¹⁵N and ²H atoms of anhydrous and monohydrated guanine exhibited extreme sensitivity to electron distribution around mentioned nuclei caused by cooperative influences of various types of hydrogen bonding interactions. Fortunately, our calculated isotropic shielding values and CS tensors for the ¹⁷O and ¹⁵N nuclei as well as obtained ¹⁴N-NQR parameters are in excellent agreement with experimental data. Therefore, we can undoubtedly conclude that for anhydrous and monohydrated guanine tetrameric clusters including intermolecular interactions, our theoretical estimates are in better agreement with observed experimental values than those in which these interactions have been ignored.     

Hybrid organic–inorganic CH3NH3PbI3 perovskite building blocks: Revealing ultra‐strong hydrogen bonding and mulliken inner complexes and their implications in materials design

Methylammonium lead iodide (CH₃NH₃PbI₃) perovskite compound has produced a remarkable breakthrough in the photovoltaic history of solar cell technology because of its outstanding device‐based performance as a light‐harvesting semiconductor. Whereas the experimental and theoretical studies of this system in the solid state have been numerously reported in the last 4 years, its fundamental cluster physics is yet to be exploited. To this end, this study has performed theoretical investigations using DFT‐M06‐2X/ADZP to examine the principal geometrical, electronic, topological, and orbital properties of the CH₃NH₃PbI₃ molecular building block. The intermolecular hydrogen bonded interactions examined for the most important conformers of the system are found to be unusually strong, with binding energies lying between −93.53 and −125.11 kcal mol⁻¹ (beyond the covalent limit, −40 kcal mol⁻¹), enabling us to classify the underlying interactions as ultra‐strong type since their characteristic properties are unidentical with those have already been proposed as very strong, strong, moderate, weak, and van der Waals. Based on this, together with the unusually high charge transfers, strong hyperconjugative interactions, sophisticated topologies of the charge density, and short intermolecular distances of separation, we have characterized the conformers of CH₃NH₃PbI₃ as Mulliken inner complexes. The consequences of these, as well as of the ultra‐strong interactions, in designing novel functional nanomaterials are outlined. © 2017 Wiley Periodicals, Inc.     

Structures,vibrational frequencies,topologies, and energies of hydrogen bonds in cysteine‐formaldehyde complexes

The hydrogen bonding interactions between cysteine (Cys) and formaldehyde (FA) were studied with density functional theory regarding their geometries, energies, vibrational frequencies, and topological features of the electron density. The quantum theory of atoms in molecules and natural bond orbital analyses were employed to elucidate the interaction characteristics in the Cys‐FA complexes. The intramolecular hydrogen bonds (H‐bonds) formed between the hydroxyl and the N atom of cysteine moiety in some Cys‐FA complexes were strengthened because of the cooperativity. Most of intermolecular H‐bonds involve the O atom of cysteine/FA moiety as proton acceptors, while the strongest H‐bond involves the O atom of FA moiety as proton acceptor, which indicates that FA would rather accept proton than providing one. The H‐bonds formed between the CH group of FA and the S atom of cysteine in some complexes are so weak that no hydrogen bonding interactions exist among them. In most of complexes, the orbital interaction of H‐bond is predominant during the formation of complex. The electron density (ρ_b) and its Laplace (?²ρ_b) at the bond critical point significantly correlate with the H‐bond parameter δR, while a linearly relationship between the second‐perturbation energy E(2) and ρ_b has been found as well. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2012     

A nuclear magnetic resonance study of dynamics in toluene-polyisobutylene solutions: 1. Penetrant diffusion and Fujita theory

The self-diffusion coefficients of toluene in polyisobutylene (PIB) solutions were determined using the pulsed field gradient nuclear magnetic resonance technique. The volume fraction of toluene in the polymer was varied from 0.045 up to 0.712 and the temperature was varied from 225 K up to 368 K. The concentration dependence of the data was interpreted using the Fujita free volume theory and the temperature dependence was interpreted with the WLF equation. These models describe separately the concentration and temperature dependencies of the toluene self-diffusion coefficients very well and the resulting free volume parameters are in good agreement with the ones extracted from the analysis of viscosity data on the same system. ©1995 John Wiley & Sons, Inc.     

Conformational and tautomeric preferences in 3‐aminoacrylaldehyde: A theoretical study

The conformational study of 3‐aminoacrylaldehyde were performed at various theoretical levels and the equilibrium conformations were determined. Furthermore, to have more reliable energies, the total energies of all forms recomputed at G2MP2 and CBS‐QB3. Theoretical calculations clearly show that the intramolecular hydrogen bond (IHB) is the origin of conformational preference and the resultant IHB order at HF/6‐311++G(d,p), MP2/6‐311++G(d,p), and CBS‐QB3 levels is different from the order which obtained from the B3LYP/6‐311++G(d,p), G2MP2, the geometrical parameters, AIM, and NBO analyses. Furthermore, our theoretical results reveal that the ketoamine (KA) tautomeric group is more stable than the enolimine (EI) and ketoimine (KI) ones. The IHB and tautomeric process could not rationalize the irregular stability of KA group with respect the others. But the population analyses of the possible conformations by NBO predict that the π‐electron delocalization, especially unusual π → π charge transfer, is the origin of tautomeric preference. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2010     

Assessment of substituent effects on the parameters of 35Cl nuclear quadrupole resonance in para‐substituted benzene‐sulphenyl chloride via quantum chemical calculations

In this research, substituent effects on the parameters of ³⁵Cl nuclear quadrupole resonance (NQR) in para‐substituted benzene‐sulphenyl chloride were studied at M062X/6‐311G(d,p) theory level. The ³⁵Cl NQR parameters of the quadrupole coupling constant (QCC) and electric‐field gradient (EFG) tensor, as well as an asymmetric parameter, were shown to be correlated with Hammett constant following their calculations. The frontier orbital energy levels, HOMO‐LUMO gaps, hardness, electrophilicity, and chemical potential values of these molecules were calculated as well. natural bond orbital (NBO) analysis was applied for calculating natural populations at chlorine atoms.     

Solute-solvent interactions. VII. Proton magnetic resonance and infrared study of ion solvation in dipolar aprotic solvents

The solvation of a variety of ions by the dipolar aprotic solvents acetonitrile, sulfolane, and dimethylsulfoxide was studied through the influence of salts on the proton magnetic resonance chemical shifts of the solvents. In the case of acetonitrile the results were supplemented with infrared measurements, which showed that in general anions affect only the C–H and cations both the C–C and particularly the CN stretching frequencies of acetonitrile. The results are discussed in conjunction with transport and other data already in the literature. Current views on the structure of these solvents are summarized.From the Ph.D. thesis of this author, University of Pittsburgh, 1972.