Enantioselective Divergent Synthesis of (−)‐cis‐α‐ and (−)‐cis‐γ‐Irone by Using Wilkinson’s Catalyst

A simple, efficient synthesis is reported for (?)‐cis‐α‐ and (?)‐cis‐γ‐irone, two precious constituents of iris oils, in ≥99 % diastereomeric and enantioselective ratios. The two routes diverge from a common intermediate prepared from (?)‐epoxygeraniol. Of general interest in this approach is the installation of the enone moiety of irones through a NHC?Au^I‐catalyzed Meyer–Schuster‐like rearrangement of a propargylic benzoate and the use of Wilkinson’s catalyst for the stereoselective hydrogenation of a prostereogenic exocyclic double bond to secure the critical cis stereochemistry of the alkyl groups at C2 and C6 of the irones. The stereochemical aspects of this reaction are rationally supported by DFT calculation of the conformers of the substrates undergoing the hydrogenation and by a modeling study of the geometry of the rhodium η² complexes involved in the diastereodifferentiation of the double bond faces. Thus, computational investigation of the η² intermediates formed in the catalytic cycle of prostereogenic alkene hydrogenation by using Wilkinson’s catalyst could be highly predictive of the stereochemistry of the products.     

Rate constants of the gas‐phase reactions of OH radicals with trans‐2‐hexenal,trans‐2‐octenal,and trans‐2‐nonenal

The rate constants of the gas‐phase reaction of OH radicals with trans‐2‐hexenal, trans‐2‐octenal, and trans‐2‐nonenal were determined at 298 ± 2 K and atmospheric pressure using the relative rate technique. Two reference compounds were selected for each rate constant determination. The relative rates of OH + trans‐2‐hexenal versus OH + 2‐methyl‐2‐butene and β‐pinene were 0.452 ± 0.054 and 0.530 ± 0.036, respectively. These results yielded an average rate constant for OH + trans‐2‐hexenal of (39.3 ± 1.7) × 10^?12 cm³ molecule^?1 s^?1. The relative rates of OH+trans‐2‐octenal versus the OH reaction with butanal and β‐pinene were 1.65 ± 0.08 and 0.527 ± 0.032, yielding an average rate constant for OH + trans‐2‐octenal of (40.5 ± 2.5) × 10^?12 cm³ molecule^?1 s^?1. The relative rates of OH+trans‐2‐nonenal versus OH+ butanal and OH + trans‐2‐hexenal were 1.77 ± 0.08 and 1.09 ± 0.06, resulting in an average rate constant for OH + trans‐2‐nonenal of (43.5 ± 3.0) × 10^?12 cm³ molecule^?1 s^?1. In all cases, the errors represent 2σ (95% confidential level) and the calculated rate constants do not include the error associated with the rate constant of the OH reaction with the reference compounds. The rate constants for the hydroxyl radical reactions of a series of trans‐2‐aldehydes were compared with the values estimated using the structure activity relationship. © 2009 Wiley Periodicals, Inc. Int J Chem Kinet 41: 483–489, 2009     

13‐cis‐β,β‐Carotene and 15‐cis‐β,β‐carotene

13‐cis‐β,β‐Carotene, C₄₀H₅₆, crystallizes with a complete molecule in the asymmetric unit, whereas 15‐cis‐β,β‐carotene, also C₄₀H₅₆, has twofold symmetry about an axis through the central bond of the polyene chain. The polyene methyl groups are arranged on one side of the polyene chains for each molecule and the 6‐s‐cisβ end groups, with the cyclohexene rings in half‐chair conformations, are twisted out of the planes of the polyene chains by angles ranging from 41.37 (17) to 52.2 (4)°. The molecules in each structure pack so that the arms of one occupy the cleft of the next, and there is significant π–π stacking of the almost‐parallel polyene chains of the 15‐cis isomer, which approach at distances of 3.319 (1)–3.591 (1) Å.     

Total syntheses of (±)‐cis‐ and trans‐11‐methoxydeethyleburnamonine

The total syntheses of 11‐methoxydeethyleburnamonines ( 4 ) and ( 13 ) were carried out with use of 6‐methoxytryptophyl bromide ( 5 ) as starting material. Compound 5 was converted in three steps to trans‐ester 8 . Acid‐catalysed epimerization of 8 , lithium aluminum hydride reduction of the ester group, tosylation and substitution with cyanide gave the cis‐nitrile 12 . Acid‐induced cyclization of 12 yielded mainly (±)‐trans‐11‐methoxydeethyleburnamonine ( 13 ), whereas base‐induced cyclization gave (±)‐cis‐11‐methoxydeethyleburnamonine ( 4 ).     

β‐Ionone reactions with the nitrate radical: Rate constant and gas‐phase products

The bimolecular rate constant of k (9.4 ± 2.4 × 10^?12 cm³ molecule^?1 s^?1 was measured using the relative rate technique for the reaction of the nitrate radical (NO₃?) with 4‐(2,6,6‐trimethyl‐1‐cyclohexen‐1‐yl)‐3‐buten‐2‐one (β‐ionone) at (297 ± 3) K and 1 atmosphere total pressure. In addition, the products of β‐ionone + NO₃? reaction were also investigated. The identified reaction products were glyoxal (HC(?O)C(?O)H), and methylglyoxal (CH₃C(?O)C(?O)H). Derivatizing agents O‐(2,3,4,5,6‐pentafluorobenzyl)hydroxylamine and N,O‐bis(trimethylsilyl)trifluoroacetamide were used to propose the other major reaction products: 3‐oxobutane‐1,2‐diyl nitrate, 2,6,6‐trimethylcyclohex‐1‐ene‐carbaldehyde, 2‐oxo‐1‐(2,6,6‐trimethylcyclohex‐1‐en‐1‐yl)ethyl nitrate, pentane‐2,4‐dione, 3‐oxo‐1‐(2,6,6‐trimethylcyclohex‐1‐en‐1‐yl)butane‐1,2‐diyl dinitrate, 3,3‐dimethylcyclohexane‐1,2‐dione, and 4‐oxopent‐2‐enal. The elucidation of these products was facilitated by mass spectrometry of the derivatized reaction products coupled with plausible β‐ionone + NO₃? reaction mechanisms based on previously published volatile organic compound + NO₃? gas‐phase mechanisms. The additional gas‐phase products 5‐acetyl‐2‐ethylidene‐3‐methylcyclopentyl nitrate, 1‐(1‐hydroxy‐7,7‐dimethyl‐2,3,4,5,6,7‐hexahydro‐1 H‐inden‐2‐yl)ethanone, 1‐(1‐hydroxy‐3a,7‐dimethyl‐2,3,3a,4,5,6,‐hexahydro‐1 H‐inden‐2‐yl)ethanone, and 5‐acetyl‐2‐ethylidene‐3‐methylcyclopentanone are proposed to be the result of cyclization through a reaction intermediate. © 2009 Wiley Periodicals, Inc. *

1 This article is a U.S. Government work and, as such, is in the public domain of the United States of America.

Int J Chem Kinet 41: 629–641, 2009     

Theoretical study of the thermolysis reaction of β‐hydroxynitriles in the gas phase

The gas‐phase thermal decomposition of 3‐hydroxypropionitrile, 3‐hydroxybutyronitrile, and 3‐hydroxy‐3‐methylbutyronitrile has been studied at the MP2/6‐31G(d) level of theory at 683.15 K and 0.06 atm. Results based both in energy and structure data seem to indicate a favorable route of decomposition via a six‐membered cyclic transition state (similar to those suggested for thermal decomposition of other related compounds, such as β‐hydroxyketones, β‐hydroxyalkenes, and β‐hydroxyalkynes) rather than a four‐membered cyclic transition state or even a quasiheterolytic pathway. © 2003 Wiley Periodicals, Inc. Int J Quantum Chem, 2003     

Enzyme‐Mediated Preparation of (+)‐ and (−)‐β‐Irone and (+)‐ and (−)‐cis‐γ‐Irone from Irone alpha®

The (−)‐ and (+)‐β‐irones ((−)‐ and (+)‐ 2 , resp.), contaminated with ca. 7 – 9% of the (+)‐ and (−)‐trans‐α‐isomer, respectively, were obtained from racemic α‐irone via the 2,6‐trans‐epoxide (±)‐ 4 (Scheme 2). Relevant steps in the sequence were the LiAlH₄ reduction of the latter, to provide the diastereoisomeric‐4,5‐dihydro‐5‐hydroxy‐trans‐α‐irols (±)‐ 6 and (±)‐ 7 , resolved into the enantiomers by lipase‐PS‐mediated acetylation with vinyl acetate. The enantiomerically pure allylic acetate esters (+)‐ and (−)‐ 8 and (+)‐ and (−)‐ 9 , upon treatment with POCl₃/pyridine, were converted to the β‐irol acetate derivatives (+)‐ and (−)‐ 10 , and (+)‐ and (−)‐ 11 , respectively, eventually providing the desired ketones (+)‐ and (−)‐ 2 by base hydrolysis and MnO₂ oxidation. The 2,6‐cis‐epoxide (±)‐ 5 provided the 4,5‐dihydro‐4‐hydroxy‐cis‐α‐irols (±)‐ 13 and (±)‐ 14 in a 3 : 1 mixture with the isomeric 5‐hydroxy derivatives (±)‐ 15 and (±)‐ 16 on hydride treatment (Scheme 1). The POCl₃/pyridine treatment of the enantiomerically pure allylic acetate esters, obtained by enzymic resolution of (±)‐ 13 and (±)‐ 14 , provided enantiomerically pure cis‐α‐irol acetate esters, from which ketones (+)‐ and (−)‐ 22 were prepared (Scheme 4). The same materials were obtained from the (9S) alcohols (+)‐ 13 and (−)‐ 14 , treated first with MnO₂, then with POCl₃/pyridine (Scheme 4). Conversely, the dehydration with POCl₃/pyridine of the enantiomerically pure 2,6‐cis‐5‐hydroxy derivatives obtained from (±)‐ 15 and (±)‐ 16 gave rise to a mixture in which the γ‐irol acetates 25a and 25b and 26a and 26b prevailed over the α‐ and β‐isomers (Scheme 5). The (+)‐ and (−)‐cis‐γ‐irones ((+)‐ and (−)‐ 3 , resp.) were obtained from the latter mixture by a sequence involving as the key step the photochemical isomerization of the α‐double bond to the γ‐double bond. External panel olfactory evaluation assigned to (+)‐β‐irone ((+)‐ 2 ) and to (−)‐cis‐γ‐irone ((−)‐ 3 ) the strongest character and the possibility to be used as dry‐down note.     

Preparation of (S,S)‐Fmoc‐β2hIle‐OH, (S)‐Fmoc‐β2hMet‐OH,and (S)‐Fmoc‐β2hTyr(tBu)‐OH for Solid‐Phase Syntheses of β2‐ and β2/β3‐Peptides

The preparation of three new N‐Fmoc‐protected (Fmoc=[(9H‐fluoren‐9‐yl)methoxy]carbonyl) β²‐homoamino acids with proteinogenic side chains (from Ile, Tyr, and Met) is described, the key step being a diastereoselective amidomethylation of the corresponding Ti‐enolates of 3‐acyl‐4‐isopropyl‐5,5‐diphenyloxazolidin‐2‐ones with CbzNHCH₂OMe/TiCl₄ (Cbz=(benzyloxy)carbonyl) in yields of 60–70% and with diastereoselectivities of >90%. Removal of the chiral auxiliary with LiOH or NaOH gives the N‐Cbz‐protected β‐amino acids, which were subjected to an N‐Cbz/N‐Fmoc (Fmoc=[(9H‐fluoren‐9‐yl)methoxy]carbonyl) protective‐group exchange. The method is suitable for large‐scale preparation of Fmoc‐β²hXaa‐OH for solid‐phase syntheses of β‐peptides. The Fmoc‐amino acids and all compounds leading to them have been fully characterized by melting points, optical rotations, IR, ¹H‐ and ¹³C‐NMR, and mass spectra, as well as by elemental analyses.     

Products of the gas‐phase reactions of the OH radical with n‐butyl methyl ether and 2‐isopropoxyethanol: Reactions of ROC(Ȯ) < radicals

The products of the gas‐phase reactions of the OH radical with n‐butyl methyl ether and 2‐isopropoxyethanol in the presence of NO have been investigated at 298 ± 2 K and 740 Torr total pressure of air by gas chromatography and in situ atmospheric pressure ionization tandem mass spectrometry. The products observed from n‐butyl methyl ether were methyl formate, propanal, butanal, methyl butyrate, and CH₃C(O)CH₂CH₂OCH₃ and/or CH₃CH₂C(O)CH₂OCH₃, with molar formation yields of 0.51 ± 0.11, 0.43 ± 0.06, 0.045 ± 0.010, ∼0.016, and 0.19 ± 0.04, respectively. Additional products of molecular weight 118, 149 and 165 were observed by API‐MS/MS analyses, with those of molecular weight 149 and 165 being identified as organic nitrates. The products observed and quantified from 2‐isopropoxyethanol were isopropyl formate and 2‐hydroxyethyl acetate, with molar formation yields of 0.57 ± 0.05 and 0.44 ± 0.05, respectively. For both compounds, the majority of the reaction products and reaction pathways are accounted for, and detailed reaction mechanisms are presented. The results of this product study are combined with previous literature product data to investigate the tropospheric reactions of R₁R₂C(Ȯ)OR radicals formed from ethers and glycol ethers, leading to a revised estimation method for the calculation of reaction rates of alkoxy radicals. © 1999 John Wiley & Sons, Inc. Int J Chem Kinet 31: 501–513, 1999     

Intramolecular hydrogen bonding in 3‐imino‐propenylamine: Theoretical investigations

Intramolecular H‐bonds existing for derivatives of 3‐imino‐propenylamine have been studied using the B3LYP/6‐311++G** level of theory. The nature of these interactions, known as resonance‐assisted hydrogen bonds, has been discussed. Vibrational frequencies for α‐derivatives were calculated at the same level of theory. The topological properties of the electron density distributions for N? H···N intramolecular bridges have been analyzed in terms of the Bader theory of atoms in molecules (AIM). Calculation for 3‐imino‐propenylamine derivatives in water solution were also carried out at B3LYP/6‐311++G** level of theory. Finally, the analysis of hydrogen bond in this molecule and their derivatives by quantum theory of natural bond orbital methods fairly support the ab initio results. © 2009 Wiley Periodicals, Inc. Int J Quantum Chem, 2009     

Bis‐μ‐oxo and μ‐η2:η2‐peroxo dicopper complexes studied within (time‐dependent) density‐functional and many‐body perturbation theory

Based on the equilibrium geometries of [Cu₂(dbdmed)₂O₂]²⁺ and [Cu₂(en)₂O₂]²⁺ obtained within density‐functional theory, we investigate their molecular electronic structure and optical response. Thereby results from occupation‐constrained as well as time‐dependent DFT (ΔSCF and TDDFT) are compared with Green's function‐based approaches within many‐body perturbation theory such as the GW approximation (GWA) to the quasiparticle energies and the Bethe‐Salpeter equation (BSE) approach to the optical absorption. Concerning the ground‐state energies and geometries, no clear trend with respect to the amount of exact exchange in the DFT calculations is found, and a strong dependence on the basis sets is to be noted. They affect the energy difference between bis‐μ‐oxo and μ‐η²:η²‐peroxo complexes by as much as 0.8 eV (18 kcal/mol). Even stronger, up to 5 eV is the influence of the exchange‐correlation functional on the gap values obtained from the Kohn‐Sham eigenvalues. Not only the value itself but also the trends observed upon the bis‐μ‐oxo to μ‐η²:η²‐peroxo transition are affected. In contrast, excitation energies obtained from ΔSCF and TDDFT are comparatively robust with respect to the details of the calculations. Noteworthy, in particular, is the near quantitative agreement between TDDFT and GWA+BSE for the optical spectra of [Cu₂(en)₂O₂]²⁺. © 2013 Wiley Periodicals, Inc.     

An experimental and theoretical study on the kinetics of the reaction between 4‐hydroxy‐3‐hexanone CH3CH2C(O)CH(OH)CH2CH3 and OH radicals

Experimental and theoretical rate coefficients are determined for the first time for the reaction of 4‐hydroxy‐3‐hexanone (CH₃CH₂C(O)CH(OH)CH₂CH₃) with OH radicals as a function of temperature. Experimental studies were carried out using two techniques. Absolute rate coefficients were measured using a cryogenically cooled cell coupled to the pulsed laser photolysis‐laser‐induced fluorescence technique with temperature and pressure ranges of 280‐365 K and 5‐80 Torr, respectively. Relative values of the studied reaction were measured under atmospheric pressure in the range of 298‐354 K by using a simulation chamber coupled to a FT‐IR spectrometer. In addition, the reaction of 4H3H with OH radicals was studied theoretically by using the density functional theory method over the range of 278‐350 K. Results show that H‐atom abstraction occurs more favorably from the C–H bound adjacent to the hydroxyl group with small barrier height. Theoretical rate coefficients are in good agreement with the experimental data. A slight negative temperature dependence was observed in both theoretical and experimental works. Overall, the results are deliberated in terms of structure–reactivity relationship and atmospheric implications.     

Rate constants for the gas‐phase β‐myrcene + OH and isoprene + OH reactions as a function of temperature

Rate constants for the gas‐phase reactions of the hydroxyl radical with the biogenic hydrocarbons, β‐myrcene and isoprene, were measured using the relative rate technique over the temperature range 313–413 K and at ～1 atm total pressure. OH was produced by the photolysis of H₂O₂, and helium was the diluent gas. The reactants were detected by online mass spectrometry, which resulted in high time resolution allowing for large amounts of data to be collected and used in the determination of the Arrhenius parameters. Many experiments were performed over the temperature range of interest, leading to more accurate parameters than previous investigations. The following Arrhenius expression has been determined for these reactions (in units of cm³ molecule^?1 s^?1): for isoprene k = (3.14) × 10^?11 exp [(338 ± 19)/T] and for β‐myrcene k = (9.19) × 10^?12 exp[(1071 ± 82)/T]. The Arrhenius plot for the isoprene + OH reaction indicates curvature in this relationship and is given by k = (3.47 ± 0.14) × 10^?17 T² exp [(1036 ± 14)/T]. Our measured rate constant for the β‐myrcene + OH reaction at 298 K is higher, but not significantly, than current literature values. This is the first report of β‐myrcene's rate constant with OH as a function of temperature. © 2009 Wiley Periodicals, Inc. Int J Chem Kinet 41: 407–413, 2009     

Isomer‐dependent reaction mechanisms of cyclic ether intermediates: cis‐2,3‐dimethyloxirane and trans‐2,3‐dimethyloxirane

Oxiranes are a class of cyclic ethers formed in abundance during low‐temperature combustion of hydrocarbons and biofuels, either via chain‐propagating steps that occur from unimolecular decomposition of β‐hydroperoxyalkyl radicals (β‐?QOOH) or from reactions of H?O with alkenes. The cis‐ and trans‐isomers of 2,3‐dimethyloxirane are intermediates of n‐butane oxidation, and while rate coefficients for β‐?QOOH → 2,3‐dimethyloxirane + ?OH are reported extensively, subsequent reaction mechanisms of the cyclic ethers are not. As a result, chemical kinetics mechanisms commonly adopt simplified chemistry to describe the consumption of 2,3‐dimethyloxirane by convoluting several elementary reactions into a single step, which may introduce mechanism truncation error—uncertainty derived from missing or incomplete chemistry. The present research examines the isomer dependence of 2,3‐dimethyloxirane reaction mechanisms in support of ongoing efforts to minimize mechanism truncation error. Reaction mechanisms are inferred via the detection of products from Cl‐initiated oxidation of both cis‐2,3‐dimethyloxirane and trans‐2,3‐dimethyloxirane using multiplexed photoionization mass spectrometry (MPIMS). The experiments were conducted at 10 Torr and temperatures of 650 K and 800 K. To complement the experiments, the enthalpies of stationary points on the ?R + O₂ surfaces were computed at the ccCA‐PS3 level of theory. In total, 28 barrier heights were computed on the 2,3‐dimethyloxiranylperoxy surfaces. Two notable aspects are low‐lying pathways that form resonance‐stabilized ketohydroperoxide‐type radicals caused by ?QOOH ring‐opening when the unpaired electron is localized adjacent to the ether group, and cis‐trans isomerization of ?R and ?QOOH radicals, via inversion, which enable reaction pathways otherwise restricted by stereochemistry. Several species were identified in the MPIMS experiments from ring opening of 2,3‐dimethyloxiranyl radicals. Neither of the two conjugate alkene isomers prototypical of ?R + O₂ reactions were detected. Products were also identified from decomposition of ketohydroperoxide‐type radicals. The present work provides the first analysis of 2,3‐dimethyloxirane oxidation chemistry and reveals that consumption pathways are complex and require the expansion of submechanisms in chemical kinetics mechanisms.     

Measurements of the kinetics of the OH + α‐pinene and OH + β‐pinene reactions at low pressure

The rate constants for the OH + α‐pinene and OH + β‐pinene reactions have been measured in 5 Torr of He using discharge‐flow systems coupled with resonance fluorescence and laser‐induced fluorescence detection of the OH radical. At room temperature, the measured effective bimolecular rate constant for the OH + α‐pinene reaction was (6.08 ± 0.24) × 10^?11 cm³ molecule^?1 s^?1. These results are in excellent agreement with previous absolute measurements of this rate constant, but are approximately 13% greater than the value currently recommended for atmospheric modeling. The measured effective bimolecular rate constant for the OH + β‐pinene reaction at room temperature was (7.72 ± 0.44) × 10^?11 cm³ molecule^?1 s^?1, in excellent agreement with previous measurements and current recommendations. Above 300 K, the effective bimolecular rate constants for these reactions display a negative temperature dependence suggesting that OH addition dominates the reaction mechanisms under these conditions. This negative temperature dependence is larger than that observed at higher pressures. The measured rate constants for the OH + α‐pinene and OH + β‐pinene reactions are in good agreement with established reactivity trends relating the rate constant for OH + alkene reactions with the ionization potential of the alkene when ab initio calculated energies for the highest occupied molecular orbital are used as surrogates for the ionization potentials for α‐ and β‐pinene. © 2002 Wiley Periodicals, Inc. Int J Chem Kinet 34: 300–308, 2002     

Gold(I) as an Artificial Cyclase: Short Stereodivergent Syntheses of (−)‐Epiglobulol and (−)‐4β,7α‐ and (−)‐4α,7α‐Aromadendranediols

Three natural aromadendrane sesquiterpenes, (?)‐epiglobulol, (?)‐4β,7α‐aromadendranediol, and (?)‐4α,7α‐aromadendranediol, have been synthesized in only seven steps in 12, 15, and 17 % overall yields, respectively, from (E,E)‐farnesol by a stereodivergent gold(I)‐catalyzed cascade reaction which forms the tricyclic aromadendrane core in a single step. These are the shortest total syntheses of these natural compounds.     

Structural Elucidation of β‐Lactam Diastereoisomers through Ion Mobility Mass Spectrometry Studies and Theoretical Calculations

The ion mobility combined with mass spectrometry and theoretical calculations were used to characterize and separate six diastereoisomeric β‐lactams. The influence of traveling wave height and wave velocity, size of the alkali metal ion (Li⁺, Na⁺ and K⁺) and drift gases with varying masses and polarizabilities (N₂ and CO₂) on separation efficacy was additionally examined. The best separation of diastereoisomers of β‐lactams was observed for adducts with Na⁺ and Li⁺ ions, whereas other parameters had little impact on separation process. The isomeric β‐lactams were characterized by both experimental and theoretical collision cross sections. The theoretically calculated values of collision cross sections obtained from extensive molecular dynamics and density functional theory calculations for model structures agreed well with those established experimentally. The relationship between separation efficacy and the configuration at the carbon atoms C5 and C6 of β‐lactam ring was defined. Copyright © 2016 John Wiley & Sons, Ltd.