Theoretical studies on the role of pi-electron delocalization in determining the conformation of N-benzylideneaniline with three types of LMO basis sets

To understand the role of pi-electron delocalization in determining the conformation of the NBA (Ph-N==CH-Ph) molecule, the following three LMO (localized molecular orbital) basis sets are constructed: a LFMO (highly localized fragment molecular orbital), an NBO (natural bond orbital), and a special NBO (NBO-II) basis sets, and their localization degrees are evaluated with our suggesting index D(L). Afterward, the vertical resonance energy DeltaE(V) is obtained from the Morokuma's energy partition over each of three LMO basis sets. DeltaE(V) = DeltaE(H) (one electron energy) + DeltaE(two) (two electron energy), and DeltaE(two) = DeltaE(Cou) (Coulomb) + DeltaE(ex) (exchange) + DeltaE(ec) (or SigmaDeltaE(n)) (electron correction). DeltaE(H) is always stabilizing, and DeltaE(Cou) is destabilizing for all time. In the case of the LFMO basis set, DeltaE(Cou) is so great that DeltaE(two) > |DeltaE(H)|. Therefore, DeltaE(V) is always destabilizing, and is least destabilizing at about the theta = 90 degrees geometry. Of the three calculation methods such as HF, DFT, and MPn (n = 2, 3, and 4), the MPn method provides DeltaE(V) with the greatest value. In the case of the NBO basis set, on the contrary, DeltaE(V) is stabilizing due to DeltaE(Cou) being less destabilizing, and it is most stabilizing at a planar geometry. The LFMO basis set has the highest localization degree, and it is most appropriate for the energy partition. In the NBA molecule, pi-electron delocalization is destabilization, and it has a tendency to distort the NBA molecular away from its planar geometry as far as possible.     

12-钼磷酸与γ-Al2O3载体的相互作用

应用酸碱滴定、X射线衍射(XRD)、激光拉曼(LRS)和顺磁共振(EPR)等方法研究了磷钼酸(PMo_(12))与γ-Al_2O_3载体间的相互作用．结果表明，PMo_(12)在γ-Al_2O_3上随负载量增加出现三种不同的分散状态，据此提出了PMo_(12)在γ-Al_2O_3上的铺展模型．     

Royal crown-shaped electride Li3-N3-Be containing two superatoms: new knowledge on aromaticity

The structure and aromaticity of a royal crown-shaped molecule Li(3)-N(3)-Be are studied at the CCSD(T)/aug-cc-pVDZ level. This molecule is a charge-separated system and can be denoted as Li(3) (2+)N(3) (3-)Be(+). It is found that the Li(3) (2+) ring exhibits aromaticity mainly because the Li(3) (2+) ring can share the pi-electron with the N(3) (-3) ring. The 4n+2 electron counter rule can be satisfied for the Li(3) (2+) subunit if the shared pi valence electron of N(3) (3-) subunit is also taken into account. This new knowledge on aromaticity of a ring from the interactions between subunits is revealed first time in this paper. Li(3)-N(3)-Be can be also regarded as a molecule containing two superatoms (Li(3) and N(3)), which may be named as a "superomolecule." Li(3)-N(3)-Be is a new metal-nonmetal-metal type sandwich complex. The N(3) (3-) trianion in the middle repulses the electron clouds of the two metal subunits (mainly to the Li(3) superatom) to generate an excess electron, and thus Li(3)-N(3)-Be is also an electride. This phenomenon of the repulsion results in: (a) the HOMO energy level increased, (b) the electron cloud in HOMO distended, (c) the area of the negative NICS value extended, and (d) the VIE value lowered. So the superomolecule Li(3)-N(3)-Be is not only a new metal-nonmetal-metal type sandwich complex but also a new type electride, which comes from the interaction between the alkali superatom (Li(3)) and the nonmetal superatom (N(3)).     

稀土胺羧酸配合物的研究 I. {[MnGd(DTPA)(H2O)5]2·H2O}n配合物的合成和晶体结构

本文首次合成了{MnLn(DTPA)(H2O)5]·H2O}n异核链式配合物(Ln=Gd, Er, Y)单晶,测定了{[MnGd(DTPA)(H2O)5]2·H2O]n的单晶结构。     

顺反构型[Rh(NH3)3Cl]在室温水溶液中的行为兼论铂配合物的抗癌机理及药效

In this paper the behaviour of mer-and fac-(Rh(NH3)3Cl3) in aqueous solution at room temperature is reported. The experimental results show that some obvious differences exist between the properties of mer-and fac-(Rh(NH3)3Cl3) coordination compounds in aqueous solution at room temperature. The fac-(Rh(NH3)3Cl3) is relatively stable, and the mer-(Rh(NH3)3 Cl3) is unstable. When one of its Cl^- is replaced by H2O(RH(NH3)3)(OH)2Cl2)Cl is formed. The mechanism of anti-tumour action of platinum compounds is briefly discussed.     

Vibrational structure of endohedral fullerene Sc3N@C78 (D3h'): evidence for a strong coupling between the Sc3N cluster and C78 cage.

The vibrational structure of the endohedral cluster fullerene Sc(3)N@C(78) is studied by FTIR spectroscopy, Raman spectroscopy and DFT-based quantum chemical calculations. Remarkably good agreement between experimental and calculated spectra is achieved and a full assignment of the Sc(3)N-based vibrational modes is given. Significant differences in the vibrational structure of the endohedral cluster fullerene Sc(3)N@C(78) and the empty, charged C(78) (6-): 5 (D(3h)') are rationalized by the strong coupling between the Sc(3)N cluster and the fullerene cage. This coupling has its origin in a significant overlap of the Sc(3)N and C(78) molecular orbitals, and causes atomic-charge and bond-length redistributions compared to the neutral C(78) and the C(78) (6-) anion. An ionic model is not sufficient to describe the electronic, geometric and vibrational structure of the Sc(3)N@C(78) nitride cluster fullerene.     

Orientational effect of aryl groups on 77Se NMR chemical shifts: experimental and theoretical investigations

The orientational effect of p-YC6H4 (Ar) on delta(Se) is elucidated for ArSeR, based on experimental and theoretical investigations. The effect is examined in the cases in which Se--CR in ArSeR is either in the Ar plane (pl) or is perpendicular to the plane (pd). 9-(Arylselanyl)anthracenes (1) and 1-(arylselanyl)anthraquionones (2) are employed to establish the effect in pl and pd, respectively. Large upfield shifts are observed for Y=NMe2, OMe, and Me, and large downfield shifts for Y=COOEt, CN, and NO2 in 1, relative to Y=H, as is expected. Large upfield shifts are brought by Y=NMe2, OMe, Me, F, Cl, and Br, and downfield shifts by Y=CN and NO2 in 2, relative to Y=H, with a negligible shift by Y=COOEt. Absolute magnetic shielding tensors of Se (sigma(Se)) are calculated for ArSeR (R=H, Me, and Ph), assuming pl and pd, based on the DFT-GIAO method. Observed characters are well explained by the total sigma(Se). Paramagnetic terms (sigmap(Se)) are governed by (sigmap(Se)xx+sigmap(Se)yy), in which the direction of np(Se) (constructed by 4pz(Se)) is set to the z axis. The main interaction in pl is the np(Se)-pi(C6H4)-pz(Y) type. The Y dependence in pl occurs through admixtures of 4pz(Se) in pi(SeC6H4Y) and pi*(SeC6H4Y), modified by the conjugation, with 4px(Se) and 4py(Se) in sigma(CSeX) and sigma*(CSeX) (X=H or C) under a magnetic field. The main interaction in pd is the sigma(CSeX)-pi(C6H4)-px(Y) type, in which Se-X is nearly on the x axis. The Y dependence in pd mainly arises from admixtures of 4pz(Se) in np(Se) with 4px(Se) and 4py(Se) in modified sigma*(CSeX), since np(Se) is filled with electrons. It is demonstrated that the effect of Y on sigmap(Se) in the pl conformation is the same regardless of whether Y is an electron-donor or electron-acceptor, whereas for pd conformations the effect is greater when Y is an electron donor, as observed in 1 and 2, respectively. Contributions of each molecular orbital and each transition on sigmap(Se) are evaluated, which enables us to recognize and visualize the effect clearly.     

基于定量序效模型的计算机辅助虚拟疫苗库设计

给出了基于定量序效模型(QSAM)的计算机辅助虚拟疫苗库设计方案, 并以此为基础成功组建了一个合理规模的HLA-A*0201限制性CTL表位库, 其实现流程如下: (1)从天然氨基酸516种理化性质经主成分分析(PCA)得到一种新的氨基酸描述子: 氨基酸综合性质得分(SP-score); (2)基于SP-score结合遗传-偏最小二乘(GA-PLS)技术建立QSAM模型; (3)利用QSAM模型作为评价工具采用遗传算法(GA)优化CTL表位种群; (4)统计优秀种群中20种氨基酸分别在抗原肽序列不同位置出现频率f; (5)保留f＞F (F为平均出现概率, 对于任意氨基酸为1/20)的氨基酸作为该位置的有利残基类型参与虚拟组合库的构建.     

Adsorption and dissociation of NH3 on clean and hydroxylated TiO2 rutile (110) surfaces: a computational study

The adsorption and dissociation of NH(3) on the clean and hydroxylated TiO(2) rutile (110) surfaces have been investigated by the first-principles calculations. The monodentate adsorbates such as H(3)N-Ti(a), H(2)N-Ti(a), N-Ti(a), H(2)N-O(a), HN-O(a), N-O(a) and H-O(a), as well as the bidentate adsorbate, Ti-N-Ti(a) can be formed on the clean surface. It is found that the hydroxyl group enhances the adsorption of certain adsorbates on the five-fold-coordinated Ti atoms (5c-Ti), namely H(2)N-Ti(a), HN-Ti(a), N-Ti(a) and Ti-N-Ti(a). In addition, the adsorption energy increases as the number of hydroxyl groups increases. On the contrary, the opposite effect is found for those on the two-fold-coordinated O atoms (2c-O). The enhanced adsorption of NH(x) (x = 1-2) on the 5c-Ti is due to the large electronegativity of the OH group, increasing the acidity of the Ti center. This also contributes to diminish the adsorption of NH(x) (x = 1-2) on the two-fold-coordinated O atoms (2c-O) decreasing its basicity. According to potential energy profile, the NH(3) dissociation on the TiO(2) surface is endothermic and the hydroxyl group is found to lower the energetics of H(2)N-Ti(a)+H-O(a) and HN-Ti(a)+2{H-O(a)}, but slightly raise the energetic of Ti-N-Ti(a)+3{H-O(a)} compare to those on the clean surface. However, the dissociation of NH(3) is found to occur on the hydroxylated surface with an overall endothermic by 31.8 kcal/mol and requires a barrier of 37.5 kcal/mol. A comparison of NH(3) on anatase surface has been discussed. The detailed electronic analysis is also carried out to gain insights into the interaction nature between adsorbate and surface.     

Preparation of RSn(I)-Sn(I)R with two unsymmetrically coordinated Sn(I) atoms and subsequent gentle activation of P4

This article reports the reduction of [{2,6-iPr(2)C(6)H(3)NC(CH(3))}(2)C(6)H(3)SnCl] (1) with potassium graphite to afford a new distannyne [{2,6-iPr(2)C(6)H(3)NC(CH(3))}(2)C(6)H(3)Sn](2) (2) with a Sn-Sn bond. The most striking phenomenon of 2 is the presence of two differently coordinated Sn atoms (one is three-coordinated, the other is four-coordinated). The Sn-Sn bond length in 2 is 2.8981(9) ?, which is very close to that of a Sn-Sn single bond (2.97-3.06 ?). To elucidate the nature of the Sn-Sn bond, DFT calculation is carried out that shows there is no multiple bond character in 2. Furthermore, the reaction of 2 with white P(4) affords the tetraphosphabicylobutane derivative 3. This is the first example of gentle activation of white phosphorus by a compound with low valent Sn atoms. Note that, unlike 2, in 3 both Sn atoms are four-coordinated.     

镍(II)-丁二酮肟体系极谱催化波的机理研究

研究了镍(II)-丁二酮肟(DMG)体系极谱催化波的行为, 这一体系的极谱催化波可用于生物及岩矿中测定痕量镍和同时测定痕量镍、钴, 并对照研究了Co(II)-DMG体系和Ni(II)-DMG体系的机理.     

半胱氨酸铜络合物的生成及其结构的研究

本文研究了在不同pH值下,半胱氨酸与CuCl_2络合生成的三种不同的络合物。在酸性溶液中,半胱氨酸与CuCl_2通过络合反应、自氧化还原反应,最后生成带氯桥的络合物[Cu_2(Ⅰ)Cl_2(cysH_2)]的白色粉末,(cysH_2为半胱氨酸)。在碱性溶液中,若反应在空气中进行,半胱氨酸与CuCl_2经氧化还原反应,结果生成天蓝色络合物(Cu_2(Ⅱ)(cyss)_2],(cyss~(2-)为胱氨酸根);若反应在绝氧条件下进行,它们则先络合,然后二聚成黑色络合物[Cu_2(Ⅱ)(cys)_2·6H_2O)。根据化学分析以及IR和ESR谱的研究,推测了这三种络合物的可能结构。     

Novel topological index for research on structure-property relationships of complex organic compounds

Based on bonding parameters such as Yang's Electronegative Force Gauge Y(i), electronic number of valence layer Z(i), number of combined hydrogen atoms h(i), number of bonding electron b(i), and quantum number such as the highest main quantum number of valence layer n(i), a novel atomic valence delta(i) (Y) is defined and a novel topological index (1)chi(Y) is derived from the atomic valence. The atomic valence is defined as delta(i) (Y) = (Z(i) - h(i))b(i)/n(i) (2)Y(i), while the topological index is expressed as (1)chi(Y) summation operator (i,j=1) (m) (delta(i) (Y)delta(j) (Y))(-1/2). Subsequently, the index (1)chi(Y) is utilized to study the structure-property relationships of complex organic compounds. The results of correlativity showed that the index is highly and extensively correlated with such properties as solubility of phenyl chlorides, gas chromatographic retention index of alkoxyl silanes, and toxicity of heterocyclic nitrogen-containing compounds. Moreover, predicted values are quite consistent with experimental ones when the index is employed to predict the partition coefficient (log P) of fatty alcohols, phenyl chlorides, and barbitals. Compared to the topological indices reported in the literature, the universality and reliability of (1)chi(Y) to the properties of complex organic compounds have been distinctively improved, and its calculating process is simple and convenient.     

用FTIR研究线形多嵌段聚氨酯与聚氯乙烯、氯化聚氯乙烯共混相容性

用溶液法得到线形多嵌段聚氨酯（PU）与聚氯乙烯（PV）、氯化聚氯乙烯（CPVC）的共混物。用FTIR研究PU/PVC、PU／CPVC共混物的相容性，发现PVC、CPVC的加入破坏了PU中原来的氢键，并且PU中的炭基（C=0）与PVC、CPVC中的α－H形成了新的氢键，因而说明了PU／PVC、PU／CPVC共混物具有良好的相容性。     

Thiophene adsorption and activation on MoP(001), gamma-Mo2N(100), and Ni2P(001): density functional theory studies

The adsorption and dissociation of thiophene on the MoP(001), gamma-Mo(2)N(100), and Ni(2)P(001) surfaces have been computed by using the density functional theory method. It is found that thiophene adsorbs dissociatively on MoP(001), while nondissociatively on gamma-Mo(2)N(100) and Ni(2)P(001). On MoP(001), the dissociation of the C-S bonds is favored both thermodynamically and kinetically, while the break of the first C-S bond on gamma-Mo(2)N(100) has an energy barrier of 1.58 eV and is endothermic by 0.73 eV. On Ni(2)P(001) there are Ni(3)P(2)- and Ni(3)P-terminated surfaces. On the Ni(3)P(2)-terminated surface, the dissociation of the C-S bonds of adsorbed thiophene is endothermic, while it is exothermic on the Ni(3)P-terminated surface.     

一种新型Eu3+ 和Zn2+ 双金属杂核配合物的结构与发光性质

合成了一种新型双金属杂核配合物Eu(TTA)3Zn(Salen).H2O(Salen=双水杨醛缩乙二胺,TTA=2-噻吩甲酰三氟丙酮),并对其进行了结构和荧光性能表征.配合物的晶体属于三斜晶系,Pī空间群.中心Eu(Ⅲ)离子与六个TTA分子的氧原子和Salen分子的两个酚氧原子配位,形成8配位的扭曲四方反棱柱构型.Zn(Ⅱ)离子与Salen分子中的两个酚氧原子和两个氮原子以及一个水分子配位,形成五配位的扭曲的四方锥构型.配合物Eu(TTA)3Zn(Salen).H2O的发光量子效率(18.0%)较配合物Eu(TTA)3.2H2O(12.5%)发光量子效率有明显提高,说明第二配体Zn(Salen).H2O对中心离子有较强的敏化发光作用.     

Development of new glass composite membranes and their properties for low temperature H2/O2 fuel cells.

A new glass electrolyte formed by constant amounts of titanium oxide (TiO2) and various amount of phosphotungstic acid (PWA) doped P2O5-SiO2 is prepared using the sol-gel process. The structural formation is confirmed by Fourier infrared spectroscopy (FTIR) and from thermogravimetric and differential thermal analysis (TG/DTA) measurements, the glasses display good thermal stability. Further characterisation is undertaken by N2 adsorption/desorption measurements, proton conductivity and hydrogen permeability analyses and a H2/O2 fuel cell test is also performed. The glass materials with large pores and specific surface area are suitable for use as the electrolyte in H2/O2 fuel cells. The effect of TiO2 processing with constant amount of PWA in phosphosilicate glasses, is investigated and discussed. The hydrogen permeability is 1.57x10(-11) mol cm(-1) s(-1) Pa(-1) at 110 degrees C for 0.8 mm thick glass; a power density of 46.3 mW cm(-2) at 125 mA cm(-2) and a current density of 175 mA cm(-2) is obtained (T=28 degrees C, relative humidity).     

The dimeric "hand-shake" motif in complexes and metallo-supramolecular assemblies of cyclotriveratrylene-based ligands

A series of clathrate and metal complexes with cyclotriveratrylene-like molecular host ligands show a similar dimeric homomeric inclusion motif in which a ligand arm of one host is the intra-cavity guest of another and vice versa. This "hand-shake" motif is found in the trinuclear transition metal complex [Cu(3)Cl(6)(1)]CH(3)CN1.5 H(2)O in which 1 is tris(4-[2,2',6',2'-terpyridyl]benzyl)cyclotriguaiacylene; in the self-included M(4)L(4) tetrahedral metallo-supramolecular assembly [Ag(4)(2)(4)] (BF(4))(4) in which 2 is tris-(2-quinolylmethyl)cyclotriguaiacylene; in the 1D coordination chains [Ag(4)]ReO(4) CH(3)CN and [Ag(5)]SbF(6)3 DMFH(2)O in which 4 is tris(1H-imidazol-1-yl)cyclotriguaiacylene and 5 is tris{4-(2-pyridyl)benzyl}cyclotriguaiacylene; and in the acetone clathrate of tris{4-(2-pyridyl)benzyl-amino}cyclotriguaiacylene. Clathrates of ligands 2 and 5 do not show the same dimeric motif, although 2 has an extended homomeric inclusion motif that gives a hexagonal network.     

Ab initio and direct dynamics studies of the reaction of singlet methylene with acetylene and the lifetime of the cyclopropene complex

The energetics of the (1)CH(2) + C(2)H(2) --> H + C(3)H(3) reaction are accurately calculated using an extrapolated coupled-cluster/complete basis set (CBS) method based on the cc-pVDZ, cc-pVTZ, and cc-pVQZ basis sets. The reaction enthalpy (0 K) is predicted to be -20.33 kcal/mol. This reaction has no classical barrier in either the entrance or exit channel. However, there are several stable intermediates-cyclopropene (c-C(3)H(4)), allene (CH(2)CCH(2)), and propyne (CH(3)CCH)-along the minimum energy path. These intermediates with zero-point energy corrections lie below the reactants by 87.11 (c-C(3)H(4)), 109.69 (CH(2)CCH(2)), and 110.78 kcal/mol (CH(3)CCH). The vibrationally adiabatic ground-state (VAG) barrier height for c-C(3)H(4) isomerization to allene is obtained as 45.2 kcal/mol, and to propyne as 37.2 kcal/mol. In addition, the (1)CH(2) + C(2)H(2) reaction is investigated utilizing the dual-level "scaling all correlation" (SAC) ab initio method of Truhlar et al., i.e., the UCCSD(SAC)/cc-pVDZ theory. Results show that the reaction occurs via long-lived complexes. The lifetime of the cyclopropene intermediate is obtained as 3.2 +/- 0.4 ps. It is found that the intermediate propyne can be formed directly from reactants through the insertion of (1)CH(2) into a C-H bond of C(2)H(2). However, compared to the major mechanism in which the propyne is produced through a ring-opening of the cyclopropene complex, this reaction pathway is much less favorable. Finally, the theoretical thermal rate constant exhibits a negative temperature dependence, which is in excellent agreement with the previous results. The temperature dependence is consistent with the earlier RRKM results but weaker than the experimental observations at high temperatures.     

Synthetic models for the cysteinate-ligated non-heme iron enzyme superoxide reductase: observation and structural characterization by XAS of an Fe(III)-OOH intermediate

Superoxide reductases (SORs) belong to a new class of metalloenzymes that degrade superoxide by reducing it to hydrogen peroxide. These enzymes contain a catalytic iron site that cycles between the Fe(II) and Fe(III) states during catalysis. A key step in the reduction of superoxide has been suggested to involve HO(2) binding to Fe(II), followed by innersphere electron transfer to afford an Fe(III)-OO(H) intermediate. In this paper, the mechanism of the superoxide-induced oxidation of a synthetic ferrous SOR model ([Fe(II)(S(Me2)N(4)(tren))](+) (1)) to afford [Fe(III)(S(Me2)N(4)(tren)(solv))](2+) (2-solv) is reported. The XANES spectrum shows that 1 remains five-coordinate in methanolic solution. Upon reaction of 1 with KO(2) in MeOH at -90 degrees C, an intermediate (3) is formed, which is characterized by a LMCT band centered at 452(2780) nm, and a low-spin state (S = 1/2), based on its axial EPR spectrum (g(perpendicular) = 2.14; g(parallel) = 1.97). Hydrogen peroxide is detected in this reaction, using both (1)H NMR spectroscopy and a catalase assay. Intermediate 3 is photolabile, so, in lieu of a Raman spectrum, IR was used to obtain vibrational data for 3. At low temperatures, a nu(O-O) Fermi doublet is observed in the IR at 788(2) and 781(2) cm(-)(1), which collapses into a single peak at 784 cm(-1) upon the addition of D(2)O. This vibrational peak diminishes in intensity over time and essentially disappears after 140 s. When 3 is generated using an (18)O-labeled isotopic mixture of K(18)O(2)/K(16)O(2) (23.28%), the vibration centered at 784 cm(-1) shifts to 753 cm(-1). This new vibrational peak is close to that predicted (740 cm(-1)) for a diatomic (18)O-(18)O stretch. In addition, a nu(O-O) vibrational peak assigned to free hydrogen peroxide is also observed (nu(O-O) = 854 cm(-1)) throughout the course of the reaction between Fe(II)-1 and superoxide and is strongest after 100 s. XAS studies indicate that 3 possesses one sulfur scatterer at 2.33(2) A and four nitrogen scatterers at 2.01(1) A. Addition of two Fe-O shells, each containing one oxygen, one at 1.86(3) A and one at 2.78(3) A, improved the EXAFS fits, suggesting that 3 is an end-on peroxo or hydroperoxo complex, [Fe(III)(S(Me2)N(4)(tren))(OO(H))](+). Upon warming above -50 degrees C, 3 is converted to 2-MeOH. In methanol and methanol:THF (THF = tetrahydrofuran) solvent mixtures, 2-MeOH is characterized by a LMCT band at lambda(max) = 511(1765) nm, an intermediate spin-state (S = 3/2), and, on the basis of EXAFS, a relatively short Fe-O bond (assigned to a coordinated methanol or methoxide) at 1.94(10) A. Kinetic measurements in 9:1 THF:MeOH at 25 degrees C indicate that 3 is formed near the diffusion limit upon addition of HO(2) to 1 and converts to 2-MeOH at a rate of 65(1) s(-1), which is consistent with kinetic studies involving superoxide oxidation of the SOR iron site.