Singlet and doublet states UV-vis spectrum and electronic properties of 3-methylchrysene and 4-methylchrysene in glass matrix

The ultraviolet-visual spectrum of 3-methylchrysene, 4-methylchrysene and their radical cations formed by ultraviolet radiations, were measured in glass matrix at the room temperature. In the measured singlet state spectrum we were able to identify the alpha, p, beta, beta' (Clar's) or (1)L(b), (1)L(a)(1)B(b), (1)B(a) (Platt's notation) bands. The presence of alpha, beta or (1)L(b), (1)B(b) was confirmed by calculating their wavelength ratio lambda(alpha)/lambda(beta). Since matrix induces perturbation in the measured spectrum; it becomes necessary to take into account the perturbation while computing the spectrum. An effort has been made in this work to simulate the electronic spectrum in the same environment as is measured. This study presents the first calculated spectrum of these systems and their cations in glass matrix by semi empirical methods. To observe the magnitude of perturbation and hence to see the spectral shift in glass matrix, the spectrum was calculated in the free state as well. Spectral properties such as frontier orbitals gap, dipole moment, mean polarizabilities and its tensors were also computed both in glass matrix and free state using semiemperical method. The measured bands of 3-methylchrysene cation at wavelength 416.50 and 473.85 nm closely match with the available diffuse intersteallar bands (DIBs) at 417.55 and 472.64 nm, respectively. Also the observed 474.85 nm band of 4-methylchrysene cation matches the DIB at 476.00 nm.     

Self-assembly of small polycyclic aromatic hydrocarbons on graphite: a combined scanning tunneling microscopy and theoretical approach

Self-assembled monolayers of chrysene and indene on graphite have been observed and characterized individually with scanning tunneling microscopy (STM) at 80 K under low-temperature, ultrahigh vacuum conditions. These molecules are small, polycyclic aromatic hydrocarbons (PAHs) containing no alkyl chains or functional groups that are known to promote two-dimensional self-assembly. Energy minimization and molecular dynamics simulations performed for small groups of the molecules physisorbed on graphite provide insight into the monolayer structure and forces that drive the self-assembly. The adsorption energy for a single chrysene molecule on a model graphite substrate is calculated to be 32 kcal/mol, while that for indene is 17 kcal/mol. Two distinct monolayer structures have been observed for chrysene, corresponding to high- and low-density assemblies. High-resolution STM images taken of chrysene with different bias polarities reveal distinct nodal structure that is characteristic of the molecular electronic state(s) mediating the tunneling process. Density functional theory calculations are utilized in the assignment of the observed electronic states and possible tunneling mechanism. These results are discussed within the context of PAH and soot particle formation, because both chrysene and indene are known reaction products from the combustion of small hydrocarbons. They are also of fundamental interest in the fields of nanotechnology and molecular electronics.     

Resonantly enhanced multiphoton ionization and zero kinetic energy photoelectron spectroscopy of chrysene: a comparison with tetracene

We report the electronic and vibrational spectroscopy of chrysene using resonantly enhanced multiphoton ionization (REMPI) and zero kinetic energy (ZEKE) photoelectron spectroscopy. As an isomer of tetracene, chrysene contains a kink in the middle of the four fused hexagonal rings, which complicates not just the symmetry but, more importantly, the molecular orbitals and hence vibronic transitions. Incidentally, the two nearby electronically excited states of chrysene have the same symmetry, and vibronic coupling introduces no out-of-plane vibrational modes. As a result, the REMPI spectrum of chrysene contains essentially only in-plane ring deformation modes, similar to that of tetracene. However, density functional calculations using gaussian even after the inclusion of vibronic coupling can only duplicate the observed REMPI spectrum in a qualitative sense, and the agreement is considerably worse than our recent work on a few pericondensed polycyclic aromatic hydrocarbons and on tetracene. The ZEKE spectrum of chrysene via the origin band of the intermediate electronic state S(1), however, can be qualitatively reproduced by a straightforward Franck-Condon calculation. The ZEKE spectra from vibrationally excited states of the S(1), on the other hand, demonstrate some degree of mode selectivity: the overall intensity of the ZEKE spectrum can vary by an order of magnitude depending on the vibrational mode of the intermediate state. A scaling factor in the theoretical vibrational frequency for the cation is also needed to compare with the experimental result, unlike tetracene and pentacene.     

Direct LD-FTMS detection of mineral-associated PAHs and their influence on the detection of co-existing amino acids

Polycyclic aromatic hydrocarbon (PAH) compounds and amino acids (AAs) are both ubiquitous throughout the universe and can be co-located in mineral matrices (e.g., meteorites); therefore, co-detection of PAHs and AAs associated with terrestrial and extra-terrestrial minerals is of interest. Nine PAH compounds representing four chemical classes of PAH (unsubstituted, acetyl-, amino-, and nitro-substituted) were applied onto the surface of quartz, plagioclase, olivine, and ilmenite mineral standards and analyzed using laser desorption/ionization Fourier transform mass spectrometry (LD-FTMS). Mass-to-charge peaks derived from PAH compounds were detected from the surfaces of all minerals evaluated. All PAH compounds were detected in the positive ion mode, whereas only nitro-substituted PAH compounds were detected in negative ion mode. In this and earlier studies, the ability to directly detect mineral-associated AAs by LD-FTMS was dependent on the mineral geomatrix. On iron-bearing minerals AAs appeared as highly fragmented ions in the spectra or were not detectable; however, the addition of the PAH chrysene enabled the ionization and detection of AAs threonine and histidine by LD-FTMS. Thus, for mineral systems such as meteorites, interstellar dust particles, soils, and sediments, the co-detection of AAs associated with PAHs by LD-FTMS is feasible.     

Gas chromatographic-mass spectrometric analysis of diols and tetrols from reactions of polycyclic aromatic hydrocarbon epoxides with hemoglobin

We have evaluated both electron ionization (EI) and negative-ion chemical ionization (NICI) methods for the analysis of trimethylsilyl derivatives of a series of polycyclic aromatic hydrocarbon (PAH) alcohols including styrene diol, benzo[e]pyrene diol and tetrols, cyclopenta[c,d]pyrene diols, benzo[a]pyrene-4,5-diols, chrysene tetrols, benz[a]anthracene tetrols I and II, and syn- and anti-benzo[a]pyrene tetrols. NICI is the more sensitive method for all compounds except styrene diol. Detection limits are compound-dependent and range from 1 fmol for cyclopenta[c,d]pyrene diol to 1 pmol for benzo[e]pyrene diol. The EI detection limit for styrene diol is 60 fmol. PAH alcohols related to the compounds listed above were observed following hydrolysis of hemoglobin which had been reacted with PAH epoxides in vitro. Benzo[a]pyrene tetrols and a chrysene tetrol were observed following hydrolysis of hemoglobin isolated from human smokers' blood. Hydrolysis of styrene oxide treated hemoglobin in 18O-labeled water revealed at least two mechanisms of ester hydrolysis, including the BAL 1 pathway.     

Origin of Polycyclic Aromatic Hydrocarbons (PAH) in Recent Sediments from the Continental Shelf of the “Golfe de Gascogne” (Atlantic Ocean) and in the Gironde Estuary

Abstract

Several aromatic series have been analysed on sediment extracts by high performance liquid chromatography coupled (HPLC) and by high resolution Shpol'skii spectroscopy. HPLC coupled to a programmable spectrofluorometer as detector has been used for the detection of the sixteen PAH priority pollutants recommended by the US Environmental Protection Agency. Relative distribution in methylated phenanthrene, chrysene, and pyrene series have been examined by high resolution spectrofluorometry in Shpol'skii matrices for the determination of the sources of aromatic matter in the sediments. These complementary studies would provide useful information on the origin of PAH in marine sediments.     

Isomer discrimination of polycyclic aromatic hydrocarbons in the Murchison meteorite by resonant ionization

We have used two-color resonant two-photon ionization (2C-R2PI) mass spectrometry to discriminate between isomers of polycyclic aromatic hydrocarbons in the Murchison meteorite. We measured the 2C-R2PI spectra of chrysene and triphenylene seeded in a supersonic jet by laser desorption. Since each isomer differs in its R2PI spectrum, we can distinguish between isomers using wavelength dependent ionization and mass spectrometry. We found both chrysene and triphenylene in sublimates from carbonaceous residue obtained by acid demineralization of the Murchison meteorite. Their R2PI mass spectra show only the molecular ion, even though these samples contain a complex inventory of organic molecules.     

Mass-analyzed threshold ionization study of vinyl chloride cation in the first excited electronic state using vacuum ultraviolet radiation in the 107-102.8 nm range

Vibrational spectrum of vinyl chloride cation in the first excited electronic state, A2 A', was obtained by one-photon mass-analyzed threshold ionization (MATI) spectroscopy. Use of an improved vacuum ultraviolet radiation source based on four-wave sum frequency mixing in Hg resulted in excellent sensitivity for the MATI signals. From the MATI spectrum, the ionization energy to the A2 A' state of the cation was determined to be 11.6667 +/- 0.0006 eV. Nearly complete vibrational assignment for the MATI peaks was possible by utilizing the vibrational frequencies and Franck-Condon factors calculated at the DFT and TDDFT/B3LYP levels with the 6-311++G(3df,3pd) basis set. Geometry of the cation in the A2 A' state was determined by Franck-Condon fitting of the MATI spectrum.     

Vacuum ultraviolet mass-analyzed threshold ionization spectroscopy of hexafluorobenzene: the Jahn-Teller effect and vibrational analysis

One-photon mass-analyzed threshold ionization (MATI) spectrum of hexafluorobenzene was obtained by using vacuum ultraviolet radiation generated by four-wave difference frequency mixing in Kr. The ionization energy of hexafluorobenzene determined from the position of the 0-0 band was 9.9108+/-0.0006 eV. To aid the spectral analysis, the Jahn-Teller coupling parameters for four e(2g) modes of C(6)F(6) (+) in the ground electronic state were calculated from the topographical data of the potential energy surface obtained at the density functional theory (DFT) level. These were used in the initial calculation of the energies of the Jahn-Teller states and upgraded through the multimode fit to the experimental data. Excellent agreement between the experimental and calculated frequencies was achieved. The vibrations which are not linear Jahn-Teller active were observed and could be assigned by referring to the frequencies obtained at the DFT level.     

Electronic spectra and ionization potentials of a stable class of closed shell polycyclic aromatic hydrocarbon cations

Due to their stability, closed shell polycyclic aromatic hydrocarbon (PAH) cations are possible candidates as carriers for some of the diffuse interstellar bands (DIBs). The electronic absorption spectra and ionization potentials of several closed shell PAH cations are determined in this study. We use density functional theory (DFT) at the BLYP/6-31G* level to determine the ionization potentials and thus confirm the stability of the PAH cations of interest. We use time-dependent density functional theory (TDDFT), again at the BLYP/6-31G* level, to calculate the vertical excitation energies and oscillator strengths of the PAH cations. We observe dominant single absorptions within the DIB spectral region of interest in all of the PAH cation spectra except for the smallest member of the series.     

One-photon mass-analyzed threshold ionization spectroscopy of 1,3,5-trifluorobenzene: the Jahn-Teller effect and vibrational analysis for the molecular cation in the ground electronic state

One-photon mass-analyzed threshold ionization spectrum of 1,3,5-trifluorobenzene was obtained by using vacuum ultraviolet radiation generated by four-wave difference frequency mixing in Kr. The Jahn-Teller parameters for the e' modes (nu(8)-nu(14)) of 1,3,5-C(6)H(3)F(3)(+) in the ground electronic state needed for spectral analysis were taken from the density functional theory results initially and were upgraded through fits to the experimental results. Excellent agreement was achieved between the experimental and calculated Jahn-Teller energy levels. Assignments of the Jahn-Teller inactive modes were accomplished by referring to the calculated frequencies and the selection rule. The ionization energy of 1,3,5-trifluorobenzene determined from the position of the 0-0 band was 9.6359+/-0.0006 eV.     

INTERPRETATION DES MODIFICATIONS SPECTRALES SUBIES PAR LES HYDROCARBURES AROMATIQUES LORS DE LEUR INTERCALEMENT AU SEIN DES ACIDES NUCLEIQUES

Abstract— This work presents a calculation of the large bathochromic shift observed in the ultraviolet spectrum of aromatic hydrocarbons (such as pyrene and 3,4 benzopyrene) when they are stacked with nucleotides and polynucleotides. For this, an estimation of the increase of molecular polarizability in the excited states is necessary. This increase is responsible for the fact that the stabilization of the stacked hydrocarbon by dispersive interactions with base pairs becomes stronger in the excited state. The calculated increases of stabilization energies are in satisfactory agreement with the observed spectral shifts.     

Concentration of polycyclic aromatic hydrocarbons by chemically modified silver nanoparticles

The ability of silver nanoparticles stabilized by cetyltrimethylammonium bromide (CTAB) to concentrate polycyclic aromatic hydrocarbons (PAHs) from aqueous solutions was shown. It was found that fixed PAH molecules are capable of acting as electronic energy donors and of generating sensibilized fluorescence of silver nanoparticles. It was shown by spectral-luminescent investigations of dilute PAH solutions (5 × 10⁻¹⁰−1 × 10⁻⁶ g/ml) in the presence of silver nanoparticles (∼0.7 vol %) that the concentration of PAH molecules from solutions occurs due to its sorption on hydrocarbon CTAB radicals in close contact to the surface of metallic silver. On the basis of the spectral data, the sorption isotherms were obtained and the values of extraction degree and partition coefficients for naphthalene, phenanthrene, anthracene, chrysene, pyrene, and 3,4-benzopyrene were calculated. It was found that the degree of extraction values of the investigated PAHs fall within the range of 73–98%, the partition coefficients (logD) ∼ 6, and the concentration coefficients ∼10⁵.     

Electronic and Molecular Structure of the C8H Valence Isomers 1,3,5-Cyclooctatriene+· and Bicyclo[4.2.0]octa-2,4-diene+· from their Electronic absorption Spectra in Freon

The molecular cations of 1,3,5-cyclooctatriene (COT^+·) and bicyclo[4.2.0]octa-2,4-diene (BCO^+·) can be observed intact in γ-irradiated Freon glasses, as opposed to Ar matrices where ionization is accompanied by extensive rearrangements. This proves the superiority of the Freon-glass method for the generation of metastable primary cations. The electronic absorption (EA) spectra reveal a) that a previous analysis of the BCO^+· electronic structure on the basis of the ultraviolet photoelectron (UP( spectrum of BCO was incomplete, and b) that COT undergoes planarization upon ionization, in accord with qualitative expectations and MNDO calculations. A previously proposed LCBO model was used to assess the influence of the above geometry change on the electronic structure of COT^+·.     

Closed-shell polycyclic aromatic hydrocarbon cations: a new category of interstellar polycyclic aromatic hydrocarbons

Density functional theory has been employed to calculate the harmonic frequencies and intensities of a range of polycyclic aromatic hydrocarbon (PAH) cations that explore both size and electronic structure effects on the infrared spectroscopic properties of these species. The sample extends the size range of PAH species considered to more than 50 carbon atoms and includes several representatives from each of two heretofore unexplored categories of PAH cations: (1) fully benzenoid PAH cations whose carbon skeleton is composed of an odd number of carbon atoms (C(odd) PAHs); and (2) protonated PAH cations (HPAH+). Unlike the radical electronic structures of the PAH cations that have been the subject of previous theoretical and experimental work, the species in these two classes have a 'closed'-shell electronic configuration. The calculated spectra of circumcoronene, C54H18, in both neutral and (radical) cationic form are also reported and compared with those of the other species. Overall, the C(odd) PAHs spectra are dominated by strong CC stretching modes near 1600 cm(-1) and display spectra that are remarkably insensitive to molecular size. The HPAH+ species evince a more complex spectrum consistent with the added contributions of aliphatic modes and their generally lower symmetry. Finally, for both classes of closed-shell cations, the intensity of the aromatic CH stretching modes is found to increase with molecular size far out of proportion with the number of CH groups, approaching a value more typical of neutral PAHs for the largest species studied.     

3s Rydberg and cationic States of pyrazine studied by photoelectron spectroscopy

We have studied 3s(n-1 and pi-1) Rydberg states and D0(n-1) and D1(pi-1) cationic states of pyrazine [1,4-diazabenzene] by picosecond (2 + 1) resonance-enhanced multiphoton ionization (REMPI), (2 + 1) REMPI photoelectron imaging, He(I) ultraviolet photoelectron spectroscopy (UPS), and vacuum ultraviolet pulsed field ionization photoelectron spectroscopy (VUV-PFI-PE). The new He(I) photoelectron spectrum of pyrazine in a supersonic jet revealed a considerably finer vibrational structure than a previous photoelectron spectrum of pyrazine vapor. We performed Franck-Condon analysis on the observed photoelectron and REMPI spectra in combination with ab initio density functional theory and molecular orbital calculations to determine the equilibrium geometries in the D0 and 3s(n-1) states. The equilibrium geometries were found to differ slightly between the D0 and 3s states, indicating the influence of a Rydberg electron on the molecular structure. The locations of the D1-D0 and 3s(pi-1)-3s(n-1) conical intersections were estimated. From the line width in the D1 <-- S0 spectrum, we estimated the lifetime of D1 to be 12 fs for pyrazine and 15 fs for fully deuterated pyrazine. A similar lifetime was estimated for the 3s(pi-1) state of pyrazine by REMPI spectroscopy. The vibrational feature of D1 observed in the VUV-PFI-PE measurement differed dramatically from that in the UPS spectrum, which suggests that the high-n Rydberg (ZEKE) states converging to the D1 vibronic state are short-lived due to electronic autoionization to the D0 continuum.     

Molecular electric properties in electronic excited states: multipole moments and polarizabilities of H2O in the lowest1 B 1 and3 B 1 excited states

Summary The dipole and quadrupole moments and the dipole polarizability tensor components are calculated for the¹ B ₁ and³ B ₁ excited states of the water molecule by using the complete active space (CAS) SCF method and an extended basis set of atomic natural orbitals. The dipole moment in the lowest¹ B ₁ (0.640 a.u.) and³ B ₁ (0.416 a.u.) states is found to be antiparallel to that in the ground electronic state of H₂O. The shape of the quadrupole moment ellipsoid is significantly modified by the electronic excitation to both states investigated in this paper. All components of the excited state dipole polarizability tensor increase by about an order of magnitude compared to their values in the ground electronic state. The present results are used to discuss some aspects of intermolecular interactions involving molecules in their excited electronic states.     

Jet-discharge cavity ring-down spectroscopy of ionized polycyclic aromatic hydrocarbons: progress in testing the PAH hypothesis for the diffuse interstellar band problem.

Naphthalene cations (C10H+8) were produced in a slit jet coupled with an electronic discharge, and cavity ring down was used to obtain its absorption spectrum in the region 645-680 nm. Two of the strongest C10H+8 bands previously characterized by matrix isolation spectroscopy were found, both with a fractional blue shift of about 0.5%. This is the first gas-phase electronic absorption spectrum of an ionized polycyclic aromatic hydrocarbon (PAH). This work opens the way for a direct comparison of laboratory PAH spectra with the diffuse interstellar bands (DIB), the origin of which still constitutes an open problem in astrophysics.