Direct dynamics study on the hydrogen abstraction reactions N2H4 + R-->N2H3 + RH (R=NH2, CH3)

We present a direct ab initio dynamics study on the hydrogen abstraction reactions N(2)H(4)+R-->N(2)H(3)+RH (R=NH(2),CH(3)), which are predicted to have six possible reaction channels for NH(2) abstraction and four for CH(3) abstraction caused by the different N(2)H(4) isomers and various attacking orientations of foreign radical to N(2)H(4). The structures and frequencies at the stationary points and the points along the minimum energy paths (MEPs) of all reaction channels are obtained at the UMP2(full)6-31+G(d,p) level of theory. Energetic information of stationary points and the points along the MEPs is further refined by means of MC-QCISD method. The rate constants of these channels are calculated using the improved canonical variational transition-state theory with the small-curvature tunneling correction (ICVT/SCT) method. The calculated results show that the favorable reaction channels are channels (n1) and (n4) as well as (c1) and (c3) (refer to Scheme 1) in the whole temperature range. The total ICVT/SCT rate constants of all channels for the two reactions at the MC-QCISDUMP2(full)6-31+G(d,p) level are both in good agreement with the available experimental data, and corresponding three-parameter expressions of k(ICVTSCT) in 220-3000 K are fitted as 6.46 x 10(-15)(T298)(3.60) exp(-386T) cm(3) mol(-1) s(-1) for NH(2) abstraction and 1.04 x 10(-14)(T298)(4.00) exp(-2037T) cm(3) mol(-1) s(-1) for CH(3) abstraction. Additionally, the long range interaction between the H atom of X-H bond in foreign radicals and the lone pair on the nonreactive N atom of the transition states is further discussed to explain the various transition-state numbers of the two similar hydrogen abstraction reactions.     

Activation of the sulfhydryl group by Mo centers: kinetics of reaction of benzyl radical with a binuclear Mo(micro-SH)Mo complex and with arene and alkane thiols

This paper provides evidence from kinetic experiments and electronic structure calculations of a significantly reduced S-H bond strength in the Mo(micro-SH)Mo function in the homogeneous catalyst model, CpMo(micro-S)(2)(micro-SH)(2)MoCp (1, Cp = eta(5)-cyclopentadienyl). The reactivity of 1 was explored by determination of a rate expression for hydrogen atom abstraction by benzyl radical from 1 (log(k(abs)/M(-)(1) s(-)(1)) = (9.07 +/- 0.38) - (3.62 +/- 0.58)/theta) for comparison with expressions for CH(3)(CH(2))(7)SH, log(k(abs)/M(-)(1) s(-)(1)) = (7.88 +/- 0.35) - (4.64 +/- 0.54)/theta, and for 2-mercaptonaphthalene, log(k(abs)/M(-)(1) s(-)(1)) = (8.21 +/- 0.17) - (4.24 +/- 0.26)/theta (theta = 2.303RT kcal/mol, 2sigma error). The rate constant for hydrogen atom abstraction at 298 K by benzyl radical from 1 is 2 orders of magnitude greater than that from 1-octanethiol, resulting from the predicted (DFT) S-H bond strength of 1 of 73 kcal/mol. The radical CpMo(micro-S)(3)(micro-SH)MoCp, 2, is revealed, from the properties of slow self-reaction, and exclusive cross-combination with reactive benzyl radical, to be a persistent free radical.     

Generation and reactivity of rhodium(IV) complexes in aqueous solutions

At pH = 1 and 25 degrees C, the Fenton-like reactions of Fe(aq)(2+) with hydroperoxorhodium complexes LRh(III)OOH(2+) (L = (H(2)O)(NH(3))(4), k = 30 M(-1) s(-1), and L = L(2) = (H(2)O)(meso-Me(6)-[14]aneN(4)), k = 31 M(-1) s(-1)) generate short-lived, reactive intermediates, believed to be the rhodium(IV) species LRh(IV)O(2+). In the rapid follow-up steps, these transients oxidize Fe(aq)(2+), and the overall reaction has the standard 2:1 [Fe(aq)(2+)]/[LRhOOH(2+)] stoichiometry. Added substrates, such as alcohols, aldehydes, and (NH(3))(4)(H(2)O)RhH(2+), compete with Fe(aq)(2+) for LRh(IV)O(2+), causing the stoichiometry to change to <2:1. Such competition data were used to determine relative reactivities of (NH(3))(4)RhO(2+) toward CH(3)OH (1), CD(3)OH (0.2), C(2)H(5)OH (2.7), 2-C(3)H(7)OH (3.4), 2-C(3)D(7)OH (1.0), CH(2)O (12.5), C(2)H(5)CHO (45), and (NH(3))(4)RhH(2+) (125). The kinetics and products suggest hydrogen atom abstraction for (NH(3))(4)RhO(2+)/alcohol reactions. A short chain reaction observed with C(2)H(5)CHO is consistent with both hydrogen atom and hydride transfer. The rate constant for the reaction between Tl(aq)(III) and L(2)Rh(2+) is 2.25 x 10(5) M(-1) s(-1).     

Model compound studies of the beta-O-4 linkage in lignin: absolute rate expressions for beta-scission of phenoxyl radical from 1-phenyl-2-phenoxyethanol-1-yl radical

Arrhenius rate expressions were determined for beta-scission of phenoxyl radical from 1-phenyl-2-phenoxyethanol-1-yl, PhC*(OH)CH2OPh (V). Ketyl radical V was competitively trapped by thiophenol to yield PhCH(OH)CH2OPh in competition with beta-scission to yield phenoxyl radical and acetophenone. A basis rate expression for hydrogen atom abstraction by sec-phenethyl alcohol, PhC*(OH)CH3, from thiophenol, log(k(abs)/M(-1) s(-1)) = (8.88 +/- 0.24) - (6.07 +/- 0.34)/theta, theta = 2.303RT, was determined by competing hydrogen atom abstraction with radical self-termination. Self-termination rates for PhC*(OH)CH3 were calculated using the Smoluchowski equation employing experimental diffusion coefficients of the parent alcohol, PhCH(OH)CH3, as a model for the radical. The hydrogen abstraction basis reaction was employed to determine the activation barrier for the beta-scission of phenoxyl from 1-phenyl-2-phenoxyethanol-1-yl (V): log(k beta)/s(-1)) = (12.85 +/- 0.22) - (15.06 +/- 0.38)/theta, k beta (298 K) ca. (64.0 s(-1) in benzene), and log(k beta /s(-1)) = (12.50 +/- 0.18) - (14.46 +/- 0.30)/theta, k beta (298 K) = 78.7 s(-1) in benzene containing 0.8 M 2-propanol. B3LYP/cc-PVTZ electronic structure calculations predict that intramolecular hydrogen bonding between the alpha-OH and the -OPh leaving group of ketyl radical (V) stabilizes both ground- and transition-state structures. The computed activation barrier, 14.9 kcal/mol, is in good agreement with the experimental activation barrier.     

Determination of the rate constants for the NH2(X2B1) + NH2(X2B1) and NH2(X2B1) + H Recombination reactions with collision partners CH4, C2H6, CO2, CF4, and SF6 at low pressures and 296 K. Part 2

The recombination rate constants for the reactions NH2(X2B1) + NH2(X2B1) + M → N2H4 + M and NH2(X2B1) + H + M → NH3 + M, where M was CH4, C2H6, CO2, CF4, or SF6, were measured in the same experiment over presseure ranges of 1-20 and 7-20 Torr, respectively, at 296 ± 2 K. The NH2 radical was produced by the 193 nm laser photolysis of NH3. Both NH2 and NH3 were monitored simultaneously following the photolysis laser pulse. High-resolution time-resolved absorption spectroscopy was used to monitor the temporal dependence of both species: NH2 on the (1)2(21) ← (1)3(31) rotational transition of the (0,7,0)A2A1 ← (0,0,0)X2B1 electronic transition near 675 nm and NH3 in the IR on either of the inversion doublets of the qQ3(3) rotational transition of the ν1 fundamental near 2999 nm. The NH2 self-recombination clearly exhibited falloff behavior for the third-body collision partners used in this work. The pressure dependences of the NH2 self-recombination rate constants were fit using Troe’s parametrization scheme, k(inf), k(0), and F(cent), with k(inf) = 7.9 × 10(-11) cm3 molecule(-1) s(-1), the theoretical value calculated by Klippenstein et al. (J. Phys. Chem. A113, 113, 10241). The individual Troe parameters were CH4, k(0)(CH4) = 9.4 × 10(-29) and F(cent)(CH4) = 0.61; C2H6, k(0)(C2H6) = 1.5 × 10(-28) and F(cent)(C2H6) = 0.80; CO2, k(0)(CO2) = 8.6 × 10(-29) and F(cent)(CO2) = 0.66; CF4, k(0)(CF4) = 1.1 × 10(-28) and F(cent)(CF4) = 0.55; and SF6, k(0)(SF6) = 1.9 × 10(-28) and F(cent)(SF6) = 0.52, where the units of k0 are cm6 molecule(-2) s(-1). The NH2 + H + M reaction rate constant was assumed to be in the three-body pressure regime, and the association rate constants were CH4, (6.0 ± 1.8) × 10(-30); C2H6, (1.1 ± 0.41) × 10(-29); CO2, (6.5 ± 1.8) × 10(-30); CF4, (8.3 ± 1.7) × 10(-30); and SF6, (1.4 ± 0.30) × 10(-29), with units cm6 molecule(-1) s,(-1) and the systematic and experimental errors are given at the 2σ confidence level.     

The role of Zn-OR and Zn-OH nucleophiles and the influence of para-substituents in the reactions of binuclear phosphatase mimetics

Analogues of the ligand 2,2'-(2-hydroxy-5-methyl-1,3-phenylene)bis(methylene)bis((pyridin-2-ylmethyl)azanediyl)diethanol (CH(3)H(3)L1) are described. Complexation of these analogues, 2,6-bis(((2-methoxyethyl)(pyridin-2-ylmethyl)amino)methyl)-4-methylphenol (CH(3)HL2), 4-bromo-2,6-bis(((2-methoxyethyl)(pyridin-2-ylmethyl)amino)methyl)phenol (BrHL2), 2,6-bis(((2-methoxyethyl)(pyridin-2-ylmethyl)amino)methyl)-4-nitrophenol (NO(2)HL2) and 4-methyl-2,6-bis(((2-phenoxyethyl)(pyridin-2-ylmethyl)amino)methyl)phenol (CH(3)HL3) with zinc(II) acetate afforded [Zn(2)(CH(3)L2)(CH(3)COO)(2)](PF(6)), [Zn(2)(NO(2)L2)(CH(3)COO)(2)](PF(6)), [Zn(2)(BrL2)(CH(3)COO)(2)](PF(6)) and [Zn(2)(CH(3)L3)(CH(3)COO)(2)](PF(6)), in addition to [Zn(4)(CH(3)L2)(2)(NO(2)C(6)H(5)OPO(3))(2)(H(2)O)(2)](PF(6))(2) and [Zn(4)(BrL2)(2)(PO(3)F)(2)(H(2)O)(2)](PF(6))(2). The complexes were characterized using (1)H and (13)C NMR spectroscopy, mass spectrometry, microanalysis, and X-ray crystallography. The complexes contain either a coordinated methyl- (L2 ligands) or phenyl- (L3 ligand) ether, replacing the potentially nucleophilic coordinated alcohol in the previously reported complex [Zn(2)(CH(3)HL1)(CH(3)COO)(H(2)O)](PF(6)). Functional studies of the zinc complexes with the substrate bis(2,4-dinitrophenyl) phosphate (BDNPP) showed them to be competent catalysts with, for example, [Zn(2)(CH(3)L2)](+), k(cat) = 5.70 ± 0.04 × 10(-3) s(-1) (K(m) = 20.8 ± 5.0 mM) and [Zn(2)(CH(3)L3)](+), k(cat) = 3.60 ± 0.04 × 10(-3) s(-1) (K(m) = 18.9 ± 3.5 mM). Catalytically relevant pK(a)s of 6.7 and 7.7 were observed for the zinc(II) complexes of CH(3)L2(-) and CH(3)L3(-), respectively. Electron donating para-substituents enhance the rate of hydrolysis of BDNPP such that k(cat)p-CH(3) > p-Br > p-NO(2). Use of a solvent mixture containing H(2)O(18)/H(2)O(16) in the reaction with BDNPP showed that for [Zn(2)(CH(3)L2)(CH(3)COO)(2)](PF(6)) and [Zn(2)(NO(2)L2)(CH(3)COO)(2)](PF(6)), as well as [Zn(2)(CH(3)HL1)(CH(3)COO)(H(2)O)](PF(6)), the (18)O label was incorporated in the product of the hydrolysis suggesting that the nucleophile involved in the hydrolysis reaction was a Zn-OH moiety. The results are discussed with respect to the potential nucleophilic species (coordinated deprotonated alcohol versus coordinated hydroxide).     

EPR studies of amine radical cations, part 1: thermal and photoinduced rearrangements of n-alkylamine radical cations to their distonic forms in low-temperature freon matrices

The thermal and photochemical transformations of primary amine radical cations (n-propyl 1.+, n-butyl 5.+) generated radiolytically in freon matrices have been investigated by using low-temperature EPR spectroscopy. Assignment of the spectra was facilitated by parallel studies on the corresponding N,N-dideuterioamines. The identifications were supported by quantum chemical calculations on the geometry, electronic structure, hyperfine splitting constants and energy levels of the observed transient radical species. The rapid generation of the primary species by a short exposure (1-2 min) to electron-beam irradiation at 77 K allowed the thermal rearrangement of 1.+ to be monitored kinetically as a first-order reaction at 125-140 K by the growth in the well-resolved EPR signal of the distonic radical cation .C(2CH2CH2NH3+. By comparison, the formation of the corresponding .CH2CH2CH2CH2NH3+ species from 5.+ is considerably more facile and already occurs within the short irradiation time. These results directly verify the intramolecular hydrogen-atom migration from carbon to nitrogen in these ionised amines, a reaction previously proposed to account for the fragmentation patterns observed in the mass spectrometry of these amines. The greater ease of the thermal rearrangement of 5.+ is in accordance with calculations on the barrier heights for these intramolecular 1,5- and 1,4-hydrogen shifts, the lower barrier for the former being associated with minimisation of the ring strain in a six-membered transition state. For 1.+, the 1,4-hydrogen shift is also brought about directly at 77 K by exposure to approximately 350 nm light, although there is also evidence for the 1,3-hydrogen shift requiring a higher energy. A more surprising result is the photochemical formation of the H2C=N. radical as a minor product under hard-matrix conditions in which diffusion is minimal. It is suggested that this occurs as a consequence of the beta-fragmentation of 1.+ to the ethyl radical and the CH2=NH2+ ion, followed by consecutive cage reactions of deprotonation and hydrogen transfer from the iminonium group. Additionally, secondary ion-molecule reactions were studied in CFCl2CF2Cl under matrix conditions that allow diffusion. The propane-1-iminyl radical CH3CH2CH=N. was detected at high concentrations of the n-propylamine substrate. Its formation is attributed to a modified reaction sequence in which 1.+ first undergoes a proton transfer within a cluster of amine molecules to yield the aminyl radical CH3CH2CH2N.H. A subsequent disproportionation of these radicals can then yield the propane-1-imine precursor CH3CH2CH=NH, which is known to easily undergo hydrogen abstraction from the nitrogen atom. The corresponding butane-1-iminyl radical was also observed.     

Gas-phase heats of formation for alkylimmonium cations by photoionization mass spectrometry

Photoionization mass spectrometry has been used to measure appearance energies for immonium cation formation from 25 alkyl amine precursors. A number of the unimolecular fragmentation processes are shown to involve excess energy at threshold so that, of the 11 different cations investigated, it is only possible to derive reliable 298 K heats of formation for CH2=NH2+ (749.0 +/- 0.9 kJ mol(-1)), CH(3)CH=NH2+ (666.1 +/- 1.1 kJ mol(-1)), C(2)H(5)CH=NH2+ (636.8 +/- 2.5 kJ mol(-1)), CH2=NH(CH3)+ (706.1 +/- 1.0 kJ mol(-1)), CH2=NH(C(2)H(5))+ (668.4 +/- 1.3 kJ mol(-1)), and CH2=N(CH3)2+ (668.0 +/- 2.5 kJ mol(-1)). When these are compared to those calculated by the G3, G3B3, G2, G2(MP2), CBS-APNO, and W1U composite ab initio methods, it is found that the smallest mean absolute deviation of 1.2 +/- 0.8 kJ mol(-1) is obtained from the G2 calculations.     

H atom attack on propene

The reaction of propene (CH(3)CH═CH(2)) with hydrogen atoms has been investigated in a heated single-pulsed shock tube at temperatures between 902 and 1200 K and pressures of 1.5-3.4 bar. Stable products from H atom addition and H abstraction have been identified and quantified by gas chromatography/flame ionization/mass spectrometry. The reaction for the H addition channel involving methyl displacement from propene has been determined relative to methyl displacement from 1,3,5-trimethylbenzene (135TMB), leading to a reaction rate, k(H + propene) → H(2)C═CH(2) + CH(3)) = 4.8 × 10(13) exp(-2081/T) cm(3)/(mol s). The rate constant for the abstraction of the allylic hydrogen atom is determined to be k(H + propene → CH(2)CH═CH(2) + H(2)) = 6.4 × 10(13) exp(-4168/T) cm(3)/(mol s). The reaction of H + propene has also been directly studied relative to the reaction of H + propyne, and the relationship is found to be log[k(H + propyne → acetylene + CH(3))/k(H + propene → ethylene + CH(3))] = (-0.461 ± 0.041)(1000/T) + (0.44 ± 0.04). The results showed that the rate constant for the methyl displacement reaction with propene is a factor of 1.05 ± 0.1 larger than that for propyne near 1000 K. The present results are compared with relevant earlier data on related compounds.     

Direct oxidation of L-cysteine by [FeIII(bpy)2(CN)2]+ and [FeIII(bpy)(CN)4]-

The oxidation of L-cysteine by the outer-sphere oxidants [Fe(bpy)2(CN)2]+ and [Fe(bpy)(CN)4]- in anaerobic aqueous solution is highly susceptible to catalysis by trace amounts of copper ions. This copper catalysis is effectively inhibited with the addition of 1.0 mM dipicolinic acid for the reduction of [Fe(bpy)2(CN)2]+ and is completely suppressed with the addition of 5.0 mM EDTA (pH<9.00), 10.0 mM EDTA (9.010.0) for the reduction of [Fe(bpy)(CN)4]-. 1H NMR and UV-vis spectra show that the products of the direct (uncatalyzed) reactions are the corresponding Fe(II) complexes and, when no radical scavengers are present, L-cystine, both being formed quantitatively. The two reactions display mild kinetic inhibition by Fe(II), and the inhibition can be suppressed by the free radical scavenger PBN (N-tert-butyl-alpha-phenylnitrone). At 25 degrees C and micro=0.1 M and under conditions where inhibition by Fe(II) is insignificant, the general rate law is -d[Fe(III)]/dt=k[cysteine]tot[Fe(III)], with k={k2Ka1[H+]2+k3Ka1Ka2[H+]+k4Ka1Ka2Ka3{/}[H+]3+Ka1[H+]2+Ka1Ka2[H+]+Ka1Ka2Ka3}, where Ka1, Ka2, and Ka3 are the successive acid dissociation constants of HSCH2CH(NH3+)CO2H. For [Fe(bpy)2(CN)2]+, the kinetics over the pH range of 3-7.9 yields k2=3.4+/-0.6 M(-1) s(-1) and k3=(1.18+/-0.02)x10(6) M(-1) s(-1) (k4 is insignificant in the fitting). For [Fe(bpy)(CN)4]- over the pH range of 6.1-11.9, the rate constants are k3=(2.13+/-0.08)x10(3) M(-1) s(-1) and k4=(1.01+/-0.06)x10(4) M(-1) s(-1) (k2 is insignificant in the fitting). All three terms in the rate law are assigned to rate-limiting electron-transfer reactions in which various thiolate forms of cysteine are reactive. Applying Marcus theory, the self-exchange rate constant of the *SCH2CH(NH2)CO2-/-SCH2CH(NH2)CO2- redox couple was obtained from the oxidation of L-cysteine by [Fe(bpy)(CN)4]-, with k11=4x10(5) M(-1) s(-1). The self-exchange rate constant of the *SCH2CH(NH3+)CO2-/-SCH2CH(NH3+)CO2- redox couple was similarly obtained from the rates with both Fe(III) oxidants, a value of 6x10(6) M(-1) s(-1) for k11 being derived. Both self-exchange rate constants are quite large as is to be expected from the minimal rearrangement that follows conversion of a thiolate to a thiyl radical, and the somewhat lower self-exchange rate constant for the dianionic form of cysteine is ascribed to electrostatic repulsion.     

Theoretical investigation of the hydrogen abstraction reaction of the OH radical with CH3CHF2 (HFC152-a): a dual level direct density functional theory dynamics study

The hydrogen abstraction reaction of the OH radical with CH(3)CHF(2) (HFC152-a) has been studied theoretically over a wide temperature range, 200-3000 K. Two different reactive sites of the molecule, CH(3) and CHF(2) groups have been investigated precisely, and results confirm that CHF(2) position of the molecule is a highly reactive site. In this study, three recently developed hybrid density functional theories, namely, MPWB1K, MPW1B95, and MPW1K, are used. The MPWB1K/6-31+G(d,p) method gives the best result for kinetic calculations, including barrier heights, reaction path information and geometry of transition state structures and other stationary points. To refine the barrier height of each channel, a single point energy calculation was performed in MPWB1K/MG3S method. The obtained rate constants by dual level direct dynamics with the interpolated single point energy method (VTST-ISPE) using DFT quantum computational methods, are consistent with available experimental data. The canonical variational transition state theory (CVT) with the zero-curvature and also the small-curvature tunneling correction methods is used to calculate the rate constants. Over the temperature range 200-3000 K, the variation effect, tunneling contribution, branching ratio of each channel are calculated. The rate constants and their temperature dependency in the form of a fitted three-parameter Arrhenius expression are k(1)(T) = 2.00 x 10(-19)(T)(2.24) exp(-1273/T), k(2)(T) = 1.95 x 10(-19)(T)(2.46) exp(-2374/T), and k(T) = 3.13 x 10(-19)(T)(2.47) exp(- 1694/T) cm(3) molecule(-1) s(-1). For the H abstraction from the CHF(2) group, a nonclassical reflection effect is detected as a dominant quantum effect.     

Kinetics of acid-catalyzed O-atom transfer from a hydroperoxorhodium complex to organic and inorganic substrates

Oxygen atom transfer from (NH(3))(4)(H(2)O)RhOOH(2+) to organic and inorganic nucleophiles takes place according to the rate law -d[(NH(3))(4)(H(2)O)RhOOH(2+)]/dt = k[H(+)] [(NH(3))(4)(H(2)O)RhOOH(2+)][nucleophile] for all the cases examined. The third-order rate constants were determined in aqueous solutions at 25 degrees C for (CH(2))(5)S (k = 430 M(-)(2) s(-)(1), micro = 0.10 M), (CH(2))(4)S(2) (182, micro = 0.10 M), CH(3)CH(2)SH (8.0, micro = 0.20 M), (en)(2)Co(SCH(2)CH(2)NH(2))(2+) (711, micro = 0.20 M), and, in acetonitrile-water, CH(3)SPh (130, 10% AN, micro = 0.20 M), PPh(3) (3.74 x 10(3), 50% AN), and (2-C(3)H(7))(2)S (45, 50% AN, micro = 0.20 M). Oxidation of PPh(3) by (NH(3))(4)(H(2)O)Rh(18)O(18)OH(2+) produced (18)OPPh(3). The reaction with a series of p-substituted triphenylphosphines yielded a linear Hammett relationship with rho = -0.53. Nitrous acid (k = 891 M(-)(2) s(-)(1)) is less reactive than the more nucleophilic nitrite ion (k = 1.54 x 10(4) M(-)(2) s(-)(1)).     

Kinetic study of the reactions of Cl atoms with CF3CH2CH2OH, CF3CF2CH2OH, CHF2CF2CH2OH, and CF3CHFCF2CH2OH

The reaction kinetics of chlorine atoms with a series of partially fluorinated straight-chain alcohols, CF(3)CH(2)CH(2)OH (1), CF(3)CF(2)CH(2)OH (2), CHF(2)CF(2)CH(2)OH (3), and CF(3)CHFCF(2)CH(2)OH (4), were studied in the gas phase over the temperature range of 273-363 K by using very low-pressure reactor mass spectrometry. The absolute rate coefficients were given by the expressions (in cm(3) molecule(-1) s(-1)): k(1) = (4.42 +/- 0.48) x 10(-11) exp(-255 +/- 20/T); k(1)(303) = (1.90 +/- 0.17) x 10(-11), k(2) = (2.23 +/- 0.31) x 10(-11) exp(-1065 +/- 106/ T); k(2)(303) = (6.78 +/- 0.63) x 10(-13), k(3) = (8.51 +/- 0.62) x 10(-12) exp(-681 +/- 72/T); k(3)(303) = (9.00 +/- 0.82) x 10(-13) and k(4) = (6.18 +/- 0.84) x 10(-12) exp(-736 +/- 42/T); k(4)(303) = (5.36 +/- 0.51) x 10(-13). The quoted 2sigma uncertainties include the systematic errors. All title reactions proceed via a hydrogen atom metathesis mechanism leading to HCl. Moreover, the oxidation of the primarily produced radicals was investigated, and the end products were the corresponding aldehydes (R(F)-CHO; R(F) = -CH(2)CF(3), -CF(2)CF(3), -CF(2)CHF(2), and -CF(2)CHFCF(3)), providing a strong experimental indication that the primary reactions proceed mainly via the abstraction of a methylenic hydrogen adjacent to a hydroxyl group. Finally, the bond strengths and ionization potentials for the title compounds were determined by density functional theory calculations, which also suggest that the alpha-methylenic hydrogen is mainly under abstraction by Cl atoms. The correlation of room-temperature rate coefficients with ionization potentials for a set of 27 molecules, comprising fluorinated C2-C5 ethers and C2-C4 alcohols, is good with an average deviation of a factor of 2, and is given by the expression log(k) (in cm(3) molecule(-1) s(-1)) = (5.8 +/- 1.4) - (1.56 +/- 0.13) x (ionization potential (in eV)).     

Gas-phase kinetics study of reaction of OH radical with CH3NHNH2 by second-order multireference perturbation theory

The gas-phase kinetics of H-abstraction reactions of monomethylhydrazine (MMH) by OH radical was investigated by second-order multireference perturbation theory and two-transition-state kinetic model. It was found that the abstractions of the central and terminal amine H atoms by the OH radical proceed through the formation of two hydrogen bonded preactivated complexes with energies of 6.16 and 5.90 kcal mol(-1) lower than that of the reactants, whereas the abstraction of methyl H atom is direct. Due to the multireference characters of the transition states, the geometries and ro-vibrational frequencies of the reactant, transition states, reactant complexes, and product complexes were optimized by the multireference CASPT2/aug-cc-pVTZ method, and the energies of the stationary points of the potential energy surface were refined at the QCISD(T)/CBS level via extrapolation of the QCISD(T)/cc-pVTZ and QCISD(T)/cc-pVQZ energies. It was found that the abstraction reactions of the central and two terminal amine H atoms of MMH have the submerged energy barriers with energies of 2.95, 2.12, and 1.24 kcal mol(-1) lower than that that of the reactants respectively, and the abstraction of methyl H atom has a real energy barrier of 3.09 kcal mol(-1). Furthermore, four MMH radical-H(2)O complexes were found to connect with product channels and the corresponding transition states. Consequently, the rate coefficients of MMH + OH for the H-abstraction of the amine H atoms were determined on the basis of a two-transition-state model, with the total energy E and angular momentum J conserved between the two transition-state regions. In units of cm(3) molecule(-1) s(-1), the rate coefficient was found to be k(1) = 3.37 × 10(-16)T(1.295) exp(1126.17/T) for the abstraction of the central amine H to form the CH(3)N(?)NH(2) radical, k(2) = 2.34 × 10(-17)T(1.907) exp(1052.26/T) for the abstraction of the terminal amine H to form the trans-CH(3)NHN(?)H radical, k(3) = 7.41 × 10(-20)T(2.428) exp(1343.20/T) for the abstraction of the terminal amine H to form the cis-CH(3)NHN(?)H radical, and k(4) = 9.13 × 10(-21)T(2.964) exp(-114.09/T) for the abstraction of the methyl H atom to form the C(?)H(2)NHNH(2) radical, respectively. Assuming that the rate coefficients are additive, the total rate coefficient of these theoretical predictions quantitatively agrees with the measured rate constant at temperatures of 200-650 K, with no adjustable parameters.     

High-accuracy measurements of OH(•) reaction rate constants and IR and UV absorption spectra: ethanol and partially fluorinated ethyl alcohols

Rate constants for the gas phase reactions of OH(?) radicals with ethanol and three fluorinated ethyl alcohols, CH(3)CH(2)OH (k(0)), CH(2)FCH(2)OH (k(1)), CHF(2)CH(2)OH (k(2)), and CF(3)CH(2)OH (k(3)) were measured using a flash photolysis resonance-fluorescence technique over the temperature range 220 to 370 K. The Arrhenius plots were found to exhibit noticeable curvature for all four reactions. The temperature dependences of the rate constants can be represented by the following expressions over the indicated temperature intervals: k(0)(220-370 K) = 5.98 × 10(-13)(T/298)(1.99) exp(+515/T) cm(3) molecule(-1) s(-1), k(0)(220-298 K) = (3.35 ± 0.06) × 10(-12) cm(3) molecule(-1) s(-1) [for atmospheric modeling purposes, k(0)(T) is essentially temperature-independent below room temperature, k(0)(220-298 K) = (3.35 ± 0.06) × 10(-12) cm(3) molecule(-1) s(-1)], k(1)(230-370 K) = 3.47 × 10(-14)(T/298)(4.49) exp(+977/T) cm(3) molecule(-1) s(-1), k(2)(220-370 K) = 3.87 × 10(-14)(T/298)(4.25) exp(+578/T) cm(3) molecule(-1) s(-1), and k(3)(220-370 K) = 2.48 × 10(-14)(T/298)(4.03) exp(+418/T) cm(3) molecule(-1) s(-1). The atmospheric lifetimes due to reactions with tropospheric OH(?) were estimated to be 4, 16, 62, and 171 days, respectively, under the assumption of a well-mixed atmosphere. UV absorption cross sections of all four ethanols were measured between 160 and 215 nm. The IR absorption cross sections of the three fluorinated ethanols were measured between 400 and 1900 cm(-1), and their global warming potentials were estimated.     

Absolute rate coefficient of the OH + CH(3)C(O)OH reaction at T = 287-802 K. The two faces of pre-reactive H-bonding

The rate constants for the reaction OH + CH3C(O)OH --> products (1) were determined over the temperature range 287-802 K at 50 and 100 Torr of Ar or N2 bath gas using pulsed laser photolysis generation of OH by CH3C(O)OH photolysis at 193 nm coupled with OH detection by pulsed laser-induced fluorescence. The rate coefficient displays a complex temperature dependence with a sharp minimum at 530 K, indicating the competition between a reaction proceeding through a pre-reactive H-bonded complex to form CH3C(O)O + H2O, expected to prevail at low temperatures, and a direct methyl-H abstraction channel leading to CH2C(O)OH + H2O, which should dominate at high temperatures. The temperature dependence of the rate constant can be described adequately by k1(287-802 K) = 2.9 x 10(-9) exp{-6030 K/T} + 1.50 x 10(-13) exp{515 K/T} cm3 molecule(-1)(s-1), with a value of (8.5 +/- 0.9) x 10-13 cm3 molecule(-1)(s-1) at 298 K. The steep increase in rate constant in the range 550-800 K, which is reported for the first time, implies that direct abstraction of a methyl-H becomes the dominant pathway at temperatures greater than 550 K. However, the data indicates that up to about 800 K direct methyl-H abstraction remains adversely affected by the long-range H-bonding attraction between the approaching OH radical and the carboxyl -C(O)OH functionality.     

Rates and mechanisms for the reactions of chlorine atoms with iodoethane and 2-iodopropane

The reaction of Cl atoms with iodoethane has been studied via a combination of laser flash photolysis/resonance fluorescence (LFP-RF), environmental chamber/Fourier transform (FT)IR, and quantum chemical techniques. Above 330 K, the flash photolysis data indicate that the reaction proceeds predominantly via hydrogen abstraction. The following Arrhenius expressions (in units of cm3 molecule(-1) s(-1)) apply over the temperature range 334-434 K for reaction of Cl with CH3CH2I (k4(H)) and CD3CD2I (k4(D)): k4(H) = (6.53 +/- 3.40) x 10(-11) exp[-(428 +/- 206)/T] and k4(D) = (2.21 +/- 0.44) x 10(-11) exp[-(317 +/- 76)/T]. At room temperature and below, the reaction proceeds both via hydrogen abstraction and via reversible formation of an iodoethane/Cl adduct. Analysis of the LFP-RF data yields a binding enthalpy (0 K) for CD3CD2I x Cl of 57 +/- 10 kJ mol(-1). Calculations using density functional theory show that the adduct is characterized by a C-I-Cl bond angle of 84.5 degrees; theoretical binding enthalpies of 38.2 kJ/mol, G2'[ECP(S)], and 59.0 kJ mol(-1), B3LYP/ECP, are reasonably consistent with the experimentally derived result. Product studies conducted in the environmental chamber show that hydrogen abstraction from both the -CH2I and -CH3 groups occur to a significant extent and also provide evidence for a reaction of the CH3CH2I x Cl adduct with CH3CH2I, leading to CH3CH2Cl formation. Complementary environmental chamber studies of the reaction of Cl atoms with 2-iodopropane, CH3CHICH3, are also presented. As determined by relative rate methods, the reaction proceeds with an effective rate coefficient, k6, of (5.0 +/- 0.6) x 10(-11) cm3 molecule(-1) s(-1) at 298 K. Product studies indicate that this reaction also occurs via two abstraction channels (from the CH3 groups and from the -CHI- group) and via reversible adduct formation.     

Kinetics and mechanisms of the oxidation of phenols by a trans-dioxoruthenium(VI) complex

The kinetics of the oxidation of phenols by trans-[Ru(VI)(L)(O)(2)](2+) (L = 1,12-dimethyl-3,4:9,10-dibenzo-1,12-diaza-5,8-dioxacyclopentadecane) have been studied in aqueous acidic solutions and in acetonitrile. In H(2)O the oxidation of phenol produces the unstable 4,4'- biphenoquinone, as evidenced by a rapid increase and then a slow decrease in absorbance at 398 nm. The first step is first-order in both Ru(VI) and phenol, and rate constants are dependent on [H(+)] according to the relationship k(f) = k(x) + (k(y)K(a)/[H(+)]), where k(x) and k(y) are the rate constants for the oxidation of PhOH and PhO(-), respectively. At 298 K and I = 0.1 M, k(x) = 12.5 M(-1) s(-1) and k(y) = 8.0 x 10(8) M(-1) s(-1). At I = 0.1 M and pH = 2.98, the kinetic isotope effects are k(H(2)O)/k(D(2)O) = 4.8 and 0.74 for k(x) and k(y), respectively, and k(f)(C(6)H(5)OH)/k(f)(C(6)D(5)OH) = 1.1. It is proposed that the k(x) step occurs by a hydrogen atom abstraction mechanism, while the k(y) step occurs by an electron-transfer mechanism. In both steps the phenoxy radical is produced, which then undergoes two rapid concurrent reactions. The first is a further three-electron oxidation by Ru(VI) and Ru(V) to give p-benzoquinone and other organic products. The second is a coupling and oxidation process to give 4,4'-biphenoquinone, followed by the decay step, k(s). A similar mechanism is proposed for reactions in CH(3)CN. A plot of log k(x) vs O-H bond dissociation enthalpies (BDE) of the phenols separates those phenols with bulky tert-butyl substituents in the ortho positions from those with no 2,6-di-tert-butyl groups into two separate lines. This arises because there is steric crowding of the hydroxylic groups in 2,6-di-tert-butyl phenols, which react more slowly than phenols of similar O-H BDE but no 2,6-tert-butyl groups. This is as expected if hydrogen atom abstraction but not electron transfer is occurring.     

Branching ratios in the hydroxyl reaction with propene

The branching ratios for the reactions of attachment of hydroxyl radical to propene and hydrogen-atom abstraction were measured at 298 K over the buffer gas pressure range 60-400 Torr (N(2)) using a subatmospheric pressure turbulent flow reactor coupled with a chemical ionization quadrupole mass spectrometer. Isotopically enriched water H(2)(18)O was used to produce (18)O-labeled hydroxyl radicals in reaction with fluorine atoms. The β-hydroxypropyl radicals formed in the attachment reactions 1a and 1b , OH + C(3)H(6) → CH(2)(OH)C(?)HCH(3) (eq 1a ) and OH + C(3)H(6) → C(?)H(2)CH(OH)CH(3) (eq 1b ), were converted to formaldehyde and acetaldehyde in a sequence of secondary reactions in O(2)- and NO-containing environment. The (18)O-labeling propagates to the final products, allowing determination of the branching ratio for the attachment channels of reaction 1. The measured branching ratio for attachment is β(1b) = k(1b)/(k(1a) + k(1b)) = 0.51 ± 0.03, independent of pressure over the 60-400 Torr pressure range. An upper limit on the hydrogen-abstraction channel, OH + C(3)H(6) → H(2)O + C(3)H(5) (eq 1c ), was determined by measuring the water yield in reactions of OH and OD radicals (produced via H(D) + NO(2) → OH(OD) + NO reactions) with C(3)H(6) as k(1c)/(k(1a) + k(1b) + k(1c)) < 0.05 (at 298 K, 200 Torr N(2)).     

Structure and Properties of [Fe(4)S(4){2,6-bis(acylamino)benzenethiolato-S}(4)](2)(-) and [Fe(2)S(2){2,6-bis(acylamino)benzenethiolato-S}(4)](2)(-): Protection of the Fe-S Bond by Double NH.S Hydrogen Bonds

Iron-sulfur clusters containing a singly or doubly NH.S hydrogen-bonded arenethiolate ligand, [Fe(4)S(4)(S-2-RCONHC(6)H(4))(4)](2)(-) (R = CH(3), t-Bu, CF(3)), [Fe(4)S(4){S-2,6-(RCONH)(2)C(6)H(3)}(4)](2)(-), [Fe(2)S(2)(S-2-RCONHC(6)H(4))(4)](2)(-) (R = CH(3), t-Bu, CF(3)), and [Fe(2)S(2){S-2,6-(RCONH)(2)C(6)H(3)}(4)](2)(-), were synthesized as models of bacterial [4Fe-4S] and plant-type [2Fe-2S] ferredoxins. The X-ray structures and IR spectra of (PPh(4))(2)[Fe(4)S(4){S-2,6-(CH(3)CONH)(2)C(6)H(3)}(4)].2CH(3)CN and (NEt(4))(2)[Fe(2)S(2){S-2,6-(t-BuCONH)(2)C(6)H(3)}(4)] indicate that the two amide NH groups at the o,o'-positions are directed to the thiolate sulfur atom and form double NH.S hydrogen bonds. The NH.S hydrogen bond contributes to the positive shift of the redox potential of not only (Fe(4)S(4))(+)/(Fe(4)S(4))(2+) but also (Fe(4)S(4))(2+)/(Fe(4)S(4))(3+) in the [4Fe-4S] clusters as well as (Fe(2)S(2))(2+)/(Fe(2)S(2))(3+) in the [2Fe-2S] clusters. The doubly NH.S hydrogen-bonded thiolate ligand effectively prevents the ligand exchange reaction by benzenethiol because the two amide NH groups stabilize the thiolate by protection from dissociation.