Reaction mechanism of HSH and CH3SH with NH2CH2COCH2X (X = F and Cl) molecules

The reaction mechanism of model compounds H₂S and CH₃SH for cysteine proteases with NH₂CH₂COCH₂X (X = F and Cl) molecules has been investigated using DFT methods with B3LYP and B3PW91 hybrid density functionals at 6‐31+G* basis sets. The single point energy has been calculated for the above reactions with B3LYP and B3PW91 functionals using aug‐cc‐PVDZ infinite basis set in both gas and solution phases. The intrinsic reaction coordinates calculations have been performed to confirm that each transition state is linked by the desired reactants and products. The geometries and relative energies for various stationary points have been determined and discussed. The zero point vibrational energy corrections have been made to predict the reliable energy. The negative value of reaction energy indicates that the overall reaction profile is found to be exothermic. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

CH2X(X=H,F,Cl)与臭氧反应机理的量子化学研究

用量子化学UMP2方法,在6-311++G**基组水平上研究了CH2X(X=H,F,Cl)与臭氧反应机理,全参数优化了反应过程中反应物、中间体、过渡态和产物的几何构型,在UQCISD(T)/6-311++G**水平上计算了它们的能量,并对它们进行了振动分析,以确定中间体和过渡态的真实性.从CH2X(X=H,F,Cl)与O3的反应机理的研究结果看,它们与O3反应的活性都比较强,相对而言,活性大小顺序为CH2F＞CH3＞CH2Cl,也就是说,CH2F自由基与臭氧间的反应活性最强,对大气臭氧的损耗将是最大的.同时研究还发现CH2X(X=H,F,Cl)系列自由基与O3的反应都是强放热反应.     

RRKM理论研究N(4S)+CH2X(X=F,Cl)的反应通道

采用RRKM理论和疏松过渡态模型计算了N(4S)+CH2X(X=F,Cl)反应的微正则速率常数和通道分支比.计算结果表明,在较低的内能下(E=280.29 kJ/mol), N(4S)+CH2F的主要产物为NCHF+H,占总产物的59.2%,次要产物为H2CN+F,占37.4%.而N(4S)+CH2Cl反应在E＝267.78 kJ/mol时,主要产物是H2CN+Cl,占90.3%, NCHCl+H只占9.0%.在内能较高的时候(取E=500.00 kJ/mol), N(4S)+CH2F的主要通道并未变化,而N(4S)+CH2Cl的主要通道变为NCHCl+H,比例为51.5%, H2CN+Cl的比例降到40.4%.     

Rh(II)络合物催化分解重氮酰胺和重氮酯的研究

报道了有关二价铑络合物催化的重氮酰胺和重氮酯的分解反应研究 .这些重氮化合物在二价铑催化下所显示的不同反应途径说明铑 (II)卡宾的反应除了电子效应之外 ,还可能受到反应底物的构象控制 .在一些情况下 ,反应底物的构象可能成为控制反应化学选择性的主要因素 .     

Thermal decomposition of di-t-butyl peroxide in the presence of (CH3)2CCH2: Reactions of CH3, (CH3)2ĊCH2CH3, and (CH3)2ĊCH2C(CH3)2CH2CH3 radicals

A study of the reaction initiated by the thermal decomposition of di-t-butyl peroxide (DTBP) in the presence of (CH₃)₂C?CH₂ (B) at 391–444 K has yielded kinetic data on a number of reactions involving CH₃ (M·), (CH₃)₂CCH₂CH₃ (MB·) and (CH₃)₂?CH₂C(CH₃)₂CH₂CH₃ (MBB·) radicals. The cross-combination ratio for M· and MB· radicals, rate constants for the addition to B of M· and MB· radicals relative to those for their recombination reactions, and rate constants for the decomposition of DTBP, have been determined. The values are, respectively, where θ = RT ln 10 and the units are dm^3/2 mol^?1/2 s^?1/2 for k₂/k and k₉/k, s^?1 for k₀, and kJ mol^?1 for E. Various disproportionation-combination ratios involving M·, MB·, and MBB· radicals have been evaluated. The values obtained are: Δ₁(M·, MB·) = 0.79 ± 0.35, Δ₁(MB·, MB·) = 3.0 ± 1.0, Δ₁(MBB·, MB·) = 0.7 ± 0.4, Δ₁(M·, MBB·) = 4.1 ± 1.0, Δ₁(MB·, MBB·) = 6.2 ± 1.4, and Δ₁(MBB·, MBB·) = 3.9 ± 2.3, where Δ₁ refers to H-abstraction from the CH₃ group adjacent to the center of the second radical, yielding a 1-olefin. © 1994 John Wiley & Sons, Inc.     

锗烯X2Ge(X=H、CH3、F、Cl、Br)与乙烯环加成反应的量子化学研究

利用量子化学密度泛函理论的B3LYP方法,在6-311G**的水平上,对锗烯X2Ge(X=H、CH3、F、Cl、Br)与C2H4的环加成反应进行了计算研究.结果表明,锗烯的基态是单重态,取代基的电负性越强,单-三态的能量差越大;控制反应的因素是电子效应,而不是立体效应;取代基的电负性越强,反应的活化能越高,放热越少;该反应由两步组成,第一步生成中间配合物,是一个无势垒的放热过程,第二步经过渡态生成产物.     

锗烯X_2Ge(X=H、CH_3、F、Cl、Br)与乙烯环加成反应的量子化学研究

利用量子化学密度泛函理论的B3LYP方法,在6-311G的水平上,对锗烯X2Ge(X=H、CH3、F、Cl、Br)与C2H4的环加成反应进行了计算研究.结果表明,锗烯的基态是单重态,取代基的电负性越强,单-三态的能量差越大;控制反应的因素是电子效应,而不是立体效应;取代基的电负性越强,反应的活化能越高,放热越少;该反应由两步组成,第一步生成中间配合物,是一个无势垒的放热过程,第二步经过渡态生成产物.     

Substituent effects and stereochemical mechanisms for substitution reactions of 18F for halogen atoms in CF3X, (CH3)3−n CHnX,and CH3X

No thermal substitutions of ¹⁸F for X (X  halogen atom) are observed with CF₃X and (CH₃)_3?nCH_nX substrates in excess SF₆. The absence of thermal yield increasing with weaker CX bond energies, as found with CH₃X substrates, is attributed to the much larger mass versus H of F and CH₃ substituents. The thermal substitution of ¹⁸F/X in CH₃X molecules probably occurs by an inversion mechanism.     

Reactions of S4N4 with diphosphines,Ph2P(X)PPh2 (X = NC4H8N,CH2CH2)

Reactions of S₄N₄ with diphosphines, Ph₂P(X)PPh₂ (X = NC₄H₈N, CH₂CH₂) have resulted in the isolation of N₃S₃? NPPh₂(X)Ph₂PN? S₃N₃ (X = NC₄H₈N, CH₂CH₂), (S)PPh₂(CH₂CH₂)Ph₂PN? S₃N₃, and (S)PPh₂NC₄H₈NPh₂P(S) as new compounds. These heterocycles have been characterized by analytical and spectroscopic (IR, UV-VIS, ¹H and ³¹P-NMR, and MS) techniques.     

The relationship between transannular secondary bonding strength and conformation in diphenyldithiophosphinate stibocanes X(CH2CH2S)2SbS2PPh2 (X = O,S)

The two stibocanes 1-oxa-4,6-dithia-5-stibocane diphenyldithiophosphinate O(CH₂CH₂S)₂SbS₂PPh₂ 1 and 1,3,6-trithia-2-stibocane diphenyldithiophosphinate S(CH₂CH₂S)₂ · SbS₂PPh₂ 2 were prepared from the corresponding chloro oxa- and thia-stibocanes 3 and 6 , and the ammonium salt of diphenyldithiophosphinic acid in CH₂Cl₂. 1 and 2 were characterized by IR, EI-MS and multinuclear NMR (¹H, ¹³C, ³¹P{¹H}). The crystalline state of 1 features two Sb1 ? S1 intermolecular interactions [3.987(2) Å] that results in a dimer. Alongside 1 displays both an endocyclic, transannular Sb1 ? O1 interaction [2.555(6) Å] and an exocyclic Sb1 ? S4 secondary interaction [3.327(2) Å]. The coordination geometry at the antimony could be described as AX₄YE ψ-trigonal bipyramid geometry with A = Sb, X = S1, S2, S3,O1; Y = S4; S1, S2 and the lone pair lays on the equatorial plane with O1 and S4 in axial positions. The Sb1 ? S4 secondary bonding is face capping one of the planes form by the lone pair, S2 and S3 of the trigonal bipyramid. 2 also displays both an endocyclic, transannular Sb1 ? S2 interaction [2.949(3) Å] and an exocyclic Sb1 ? S5 secondary interaction [3.216(3) Å]. The antimony becomes five-coordinate, giving the AX₄YE ψ-trigonal bipyramid geometry with S1, S3 and the lone pair laying on the equatorial plane with S2 and S4 in axial positions. The Sb1 ? S5 also here is face capping the plane form by the lone pair, S3 and S4 of the trigonal bipyramid. The conformation of the eight membered ring in 2 is boat-chair. In 1 the main conformation is chair-planar. Die Konformation des Achtringes in 2 ist Wanne-Sessel. In 1 ist die Konformation des Achtringes Sessel-planar.     

New superhindered polydentate polyphosphine ligands P(CH2CH2P(t)Bu2)3, PhP(CH2CH2P(t)Bu2)2, P(CH2CH2CH2P(t)Bu2)3, and their ruthenium(II) chloride complexes

The synthesis and characterization of the extremely hindered phosphine ligands, P(CH(2)CH(2)P(t)Bu(2))(3) (P(2)P(3)(tBu), 1), PhP(CH(2)CH(2)P(t)Bu(2))(2) (PhP(2)P(2)(tBu), 2), and P(CH(2)CH(2)CH(2)P(t)Bu(2))(3) (P(3)P(3)(tBu), 3) are reported, along with the synthesis and characterization of ruthenium chloro complexes RuCl(2)(P(2)P(3)(tBu)) (4), RuCl(2)(PhP(2)P(2)(tBu)) (5), and RuCl(2)(P(3)P(3)(tBu)) (6). The bulky P(2)P(3)(tBu) (1) and P(3)P(3)(tBu) (3) ligands are the most sterically encumbered PP(3)-type ligands so far synthesized, and in all cases, only three phosphorus donors are able to bind to the metal center. Complexes RuCl(2)(PhP(2)P(2)(tBu)) (5) and RuCl(2)(P(3)P(3)(tBu)) (6) were characterized by crystallography. Low temperature solution and solid state (31)P{(1)H} NMR were used to demonstrate that the structure of RuCl(2)(P(2)P(3)(tBu)) (4) is probably analogous to that of RuCl(2)(PhP(2)P(2)(tBu)) (5) which had been structurally characterized.     

Theoretical Study of CH3CH=CH2+O(1D) Reaction: Mechanism and Kinetics

The mechanism and kinetics for the reaction of propene(CH₃CH=CH₂) molecule with O(¹D) atom were investigated theoretically. The electronic structure information of the potential energy surface(PES) was obtained at the B3LYP/6-311+G(d,p) level, and the single-point energies were refined by the multi-level MCG3-MPWB method. The calculated results show that O(¹D) atom can attack CH₃CH=CH₂ via the barrierless insertion mechanism to form four energy-riched intermediates CH₃C(OH)CH₂(IM1), CH₃CHCHOH(IM2), CH₂OHCHCH₂(IM3) and cyclo- CH₂OCHCH₃(IM4), respectively, on the singlet PES. The branching ratios as well as the pressure- and temperaturedependence of various product channels for this multi-well reaction were predicted by variational transition-state and Rice-Ramsperger-Kassel-Marcus(RRKM) theories. The present results will be useful to gain a deep insight into the reaction mechanism and kinetics of CH₃CH=CH₂+O(¹D) reaction.     

Synthesis and spectroscopy of N3P3X5OCH=CH2 (X = Cl, F, OCH3, OCH2CF3, N(CH3)2) and N3P3X4(OCH=CH2)2 (X = Cl, N(CH3)2). Correlations of ultraviolet photoelectron spectroscopy and nuclear magnetic resonance data to electronic and geometrical structure

The syntheses of the vinyloxycyclotriphosphazene derivatives N3P3X5OCH=CH2 (X = OMe, OCH2CF3) and the N3P3(NMe2)4(OCH=CH2)2 isomeric mixture along with improved preparations of N3P3X5OCH=CH2 (X = F, NMe2) are reported. The interactions between the vinyloxy function and the cyclophosphazene in these and the previously reported N3P3Cl5 (OCH=CH2) and N3P3F6-n(OCH=CH2)n (n = 1-4) have been examined by ultraviolet photoelectron spectroscopy (UPS) and NMR spectroscopy. The UPS data for the chloro and fluoro derivatives show a strong electron-withdrawing effect of the phosphazene on the olefin that is mediated with decreasing halogen substitution. The 1H and 13C NMR data for N3P3X5OCH=CH2 (X = F, Cl, OMe, OCH2CF3, NMe2) show significant changes as a function of the phosphazene substituent. There is a linear correlation between the beta-carbon chemical shift on the vinyloxy unit and the phosphorus chemical shift at the vinyloxyphosphorus centers. The chemical shifts of the different phosphorus centers on each ring are also related in a linear fashion. These relationships may be understood in terms of the relative electron donor-acceptor abilities of the substituents on the phosphazene ring. The 1H NMR spectra of the N3P3(NMe2)4(OCH-CH2)2 isomeric mixture allow for assignment of the relative amounts of cis and trans isomers. A model for the observed cis preference in the formation of N3P3Cl4(OCH=CH)2 is presented.     

Resonant two-photon ionization and ab initio conformational analysis of haloethyl benzenes (PhCH(2)CH(2)X,X=Cl,F)

The S(1) <-- S(0) transitions of the gaseous (2-fluoroethyl)-benzene (FEB) and (2-chloroethyl)-benzene (CEB) have been investigated using a combination of two-color resonant two-photon ionization and UV-UV hole burning spectroscopy. Both anti and gauche conformers have been identified on the basis of rotational band contour analysis supported by ab initio calculations on the ground and electronically excited states. The gauche origin band of FEB at 37,673 cm(-1) is redshifted 50 cm(-1) relative to the corresponding anti origin, while CEB origin bands overlap at 37,646 cm(-1). Relative conformational stability and populations in the jet have been estimated for both molecules, based on the intensity ratio of S(1) <-- S(0) band origin transitions. These are compared with a range of related molecules with the structural motif PhCH(2)CH(2)X (X=CH(3),CH(2)CH(3),NH(2),OH,COOH,CCH,CN). Theory and experimental results for FEB and CEB show repulsive interactions between the halogen substituents and the pi cloud of the phenyl rings destabilizing the gauche conformers, but the preference for the anti conformers is relatively modest. The gauche conformer origins show very different hybrid character: FEB is largely b type, while CEB is an ac hybrid in keeping with theoretically computed TM "rotations" (theta(elec)) of -7 degrees and -56 degrees , respectively. This difference is attributed largely to rotation of the side chain in opposite directions about the C(1)C(alpha) bond. Spectra of FEB(H(2)O) and CEB(H(2)O) single water clusters show evidence of an anti conformation in the host molecule.     

Fe+与CH3X（X=Cl,Br,I）反应的理论研究

铁及其复合物催化的C—X键功能化日益引起人们的重视.采用密度泛函理论(DFT),在B3LYP/def2-SVP水平下详细研究了Fe+与CH3X(X=Cl,Br,I)的反应活性和机理.计算结果表明标题反应存在两种反应机制,即插入机制和SN2机制.从机理上来看,在插入机理中,反应都始于Fe+离子从侧面进攻CH3X,生成产物FeX+和CH3;而在SN2机制中,反应则始于Fe+离子从背后进攻CH3X,生成产物3FeCH+和X.从我们的计算可以看出,四重态或六重态下的Fe+离子在C—X键活化中展现了截然不同的催化活性;在所有通道中,都以四重态为主导;SN2机制中相对较高的决速能垒使其丧失了竞争性.再者,计算表明在所有的插入机制中,所有通道都是放热的,而在SN2机制中,仅有X=I时,反应是放热的.此外,计算表明这些反应属于两态反应活性,两种机制中,在反应的入口和出口存在最小能量交叉点.此外,反应途径电子结构追踪分析表明自旋极化对能量影响较大,调控着反应采取的反应通道和主副产物比例.通过本文的理论研究,尤其是详细的电子结构分析,为铁催化剂活化C—X键和C—C耦联反应提供了线索和以铁为基的催化剂设计提供理论依据.     

Mass spectra of polymeric thioformaldehydes (CH2S)3, (CH2S)4, (CH2S)5 and (CH2S)x

The mass spectral fragmentations of various thioformaldehydes, 1,3,5-trithiacyclohexane, 1,3,5,7-tetrathiacyclooctane, 1,3,5,7,9-pentathiacyclodecane and a polymeric form (CH₂S)_x have been examined. The principal features of the spectra are reported. The fragmentation occurred by fracture of the ring in the cyclic compounds with or without rearrangement.     

Experimental and ab initio structural study of the ketotin compounds,X3SnCR2CH2COMe: crystal structures of X3SnCMe2CH2COMe (X = Cl and I)

The MeCOCH₂CMe₂ ligand in X₃SnCMe₂CH₂COMe ( 2 ; X = halide) acts as a C,O‐chelating group both in the solid state and in non‐coordinating solutions. The intramolecular Sn? O bond lengths in trigonal bipyramidal 2 (X = Cl and I), as determined by X‐ray crystallography, indicate that the stronger interaction occurs in 2 X = Cl. Comparisons with the Sn? O bond lengths in the estertin trihalides, X₃SnCH₂CH₂CO₂R ( 1 ; R = Me), suggest that the latter form stronger chelates than do 2 . In chlorocarbon solution, 2 (X = Cl, I) undergoes exchange reactions, as shown by NMR spectra, to give all possible halide derivatives, ∑(Cl_nI_3?nSnCMe₂CH₂COMe) (n = 0–3). Various ab initio calculations on 2 and X₃SnCH₂CH₂COMe ( 3 ) have been carried out. Comparisons of the theoretical and experimental structures of 2 for X = Cl or I are reported. Copyright © 2005 John Wiley & Sons, Ltd.