Theoretical study of tricyclo[3,3,1,1]decane, tricyclo[3,3,1,1]decsilane molecules and their halogen derivatives, C10H12X4 and Si10H12X4 (X=F, Cl, Br, I)

The B3LYP/3-21G* ab initio molecular orbital method from the program package was applied to study tricyclo[3,3,1,1^3,7]decane and tricyclo[3,3,1,1^3,7]decsilane molecules and their halogen derivatives (1,3,5,7-tetrahalotricyclo[3,3,1,1^3,7]decane and 1,3,5,7-tetrahalotricyclo[3,3,1,1^3,7]decsilane, C₁₀H₁₂X₄ and Si₁₀H₁₂X₄ respectively). The optimized structures of these compounds were obtained. Ionization potentials, HOMO and LUMO energies, energy gaps, heats of formation, atomization energies and vibration frequencies were calculated. The calculations indicate that these molecules are stable and have T_d symmetry. Tricyclo[3,3,1,1^3,7]decsilane and its halogen derivatives (Si₁₀H₁₂X₄) are found to have higher conductivity than tricyclo[3,3,1,1^3,7]decane and its halogen derivatives (C₁₀H₁₂X₄). 1,3,5,7-Tetrafluorotricyclo[3,3,1,1^3,7]decane (C₁₀H₁₂F₄) and 1,3,5,7-tetrafluorotricyclo[3,3,1,1^3,7]decsilane (Si₁₀H₁₂F₄) were found to be the easiest compounds to form and the most difficult to dissociate of all 1,3,5,7-tetrahalotricyclo[3,3,1,1^3,7]decane and 1,3,5,7-tetrahalotricyclo[3,3,1,1^3,7]decsilane compounds, respectively.     

Theoretical Studies of β-Peptide Models

Recently, the β-peptides, which consist entirely of β-amino acids instead of α-amino acids, have received intensive attention because of their interesting secondary structures.^1-3 Depending upon side chain substitution pattern, β-sheets, 14-helices, and 12-helices all have been observed.¹ Due to great variety of substitution patterns,the easiness of formation of secondary structures with even 4-6 residues compared to about 15 for natural peptides,and ready formation of cyclic compounds that stack into tube structures,⁴ β-peptides have generated great excitement. In addition,β-amino acids also frequently occur in natural products, especially cyclic peptides. It has been found that β-amino acids have excellent stability toward proteases. Therefore, they have wide applications in drug development.⁶     

碱金属离子与三肽复合物的气相裂解反应

为了探索侧链R基团对碱金属离子与多肽复合物气相裂解反应的影响, 采用电喷雾电离质谱法研究了碱金属离子Li⁺, Na⁺和K⁺分别与甘氨酸三肽(GGG)、 甘氨酰-苯丙氨酰-甘氨酸三肽(GFG)和甘氨酰-甘氨酰-苯丙氨酸三肽(GGF)形成的复合物的气相裂解反应. 质谱定性实验结果表明, Li⁺, Na⁺和K⁺与GGG, GFG或GGF在气相中可以形成稳定的复合物, 配合比为1∶1或2∶1. 竞争反应质谱图显示, GGG, GFG或GGF与碱金属离子形成的复合物的质谱峰丰度按Li⁺, Na⁺, K⁺顺序依次下降, 表明随着碱金属离子半径的增加, 它们与三肽的结合强度依次减弱. 碰撞诱导解离显示, 母体离子[GGG+Na]⁺, [GGF+Na]⁺和[GFG+Na]⁺ 的质心碰撞能量E(CM)₅₀数值分别为1.94, 1.76和1.63 eV. 通过质谱滴定法测得[GGG+Na]⁺, [GFG+ Na]⁺和[GGF+Na]⁺ 的结合常数lg\begin{array}{c}{K}_{a_1}\end{array}分别为5.30, 5.25和5.17. 质谱法定量结果进一步确认复合物的稳定性顺序为[GGG+Na]⁺>[GGF+Na]⁺>[GFG+Na]⁺, 表明由于空间位阻的影响, 侧链R基团含有苄基的GFG或 GGF与Na⁺的键合强度要小于侧链R全部为H的GGG. 串级质谱分析结果显示, 碱金属化的GGG断裂位点较多, 可解离出丰富的金属化a₂, b和y型碎片离子, 而碱金属化的GGF和GFG解离出的金属化y型离子较多, b型离子其次, 金属化a型离子几乎没有. 此外, 双碱金属化的GGF可解离出较多金属化y型离子. 复合物[GGF+Na]⁺的裂解曲线显示, 当碰撞能量为25 eV时, [y₂+Na-H]⁺ 和[b₂+Na+OH]⁺为主要碎片离子, 当碰撞能量>40 eV时, 只有[b₂+Na+OH]⁺ 碎片离子占有优势数量. 根据质子化三肽裂解机理可以推测, 钠化GFG裂解后生成含噁唑酮的[b₂+Na]⁺离子, 该离子经过一系列过渡态生成[a₂+Na]⁺(2-苄基-4-咪唑酮), 而不是常见的亚胺离子.     

Development of LC-IMS-CID-TOFMS techniques: Analysis of a 256 component tetrapeptide combinatorial library

Recent improvements in ion mobility/time-of-flight mass spectrometry techniques have made it possible to incorporate nano-flow liquid chromatography and collision induced dissociation techniques. This combination of approaches provides a new strategy for detailed characterization of complex systems—such as, combinatorial libraries. Our work uses this technology to provide a detailed analysis of a tetrapeptide library having the general form Xxx₁-Xxx₂-Xxx₃-Xxx₄ where Xxx₁ = Glu, Phe, Val, Asn; Xxx₂ = Glu, Phe, Val, Tyr; Xxx₃ = Glu, Phe, Val, Thr; and Xxx₄ = Glu, Phe, Val, Leu—a system that is expected to contain 256 different peptide sequences. The results corroborate the presence of many expected peptide sequences and indicate that some synthetic steps appear to have failed. Particularly interesting is the observation of a t-butyl protecting group on the tyrosine (Tyr) residue. It appears that most Tyr containing peptides that have this t-butyl group attached favor formation of [2M + 2H]²⁺ dimers, which can be readily distinguished from [M + H]⁺ monomers based on differences in their gas-phase mobilities. In this case, we demonstrate the use of the mobility differences between [2M + 2H]²⁺ and [M + H]⁺ ions as a signature for a failure of a synthetic step.     

二苯并噻吩及其氧化物与离子液体相互作用的理论研究

采用密度泛函理论方法比较了DBT/DBTO₂和[BMIM]⁺[PF₆]^-/[BMIM]⁺[BF₄]^-的相互作用。对最稳定的[BMIM]⁺[PF₆]^-、[BMIM]⁺[PF₆]^--DBT、[BMIM]⁺[PF₆]^--DBTO₂、[BMIM]⁺[BF₄]^-、[BMIM]⁺[BF₄]^--DBT、[BMIM]⁺[BF₄]^--DBTO₂进行了NBO和AIM分析。结果表明,DBT和[BMIM]⁺[PF₆]^-/[BMIM]⁺[BF₄]^-中的咪唑环彼此相互平行,NBO和AIM分析表明它们之间发生了π-π相互作用。H1'和H9'形成的F…H氢键有利于π-π堆积作用的形成。DBTO₂倾向于趋近C2-H2和甲基基团形成O…H相互作用;DBTO₂优先吸附在[BMIM]⁺[PF₆]^-/[BMIM]⁺[BF₄]^-。在模拟油中,[BMIM]⁺[PF₆]^-和[BMIM]⁺[BF₄]^-离子液体对DBTO₂的萃取能力大于DBT,其原因是可能是DBTO₂具有较大的极性和O…H与F…H的氢键作用。     

内吗啡肽-1及其类似物的合成及与阿片受体结合作用

内吗啡肽－1和内吗啡肽－2（Endomorphin-1,EM-1;Endomorphin-2,EM-2)是阿片肽类化合物中近期发现的两种,被认为是μ型阿片受体（μ-opiate receptor,MOR)的高亲和性、高选择性的内源性配基^[1]。这一发现是阿片肽研究领域的又一次重大突破,尤其是EM－1与阿片受体相结合的作用^[2]、镇痛效应和降血压活性引起了广泛关注。Fiori等^[3]进而指出了EM－1的生物活性构象,当其处于膜模拟环境中时,认为主链采取伸展构象,2－Pro等^[3]进而指出了EM－1的生物活性构象,当其处于膜模拟环境中时,认为主链采取伸展构,2－Pro采取顺式构型;1－Tyr的侧链与3－Trp的侧链距离较近,而结合EM－1构象研究成果,合理替换了EM－1的2－／3－位氨基酸（Amino acid,Aa),用液相多肽合成法得到了EM－1及其6个类似物,并利用离体生物检定法研究了它们的阿片受体结合作用,以期有助于内吗啡肽进一步的基础及应用研究。     

Reactions of 3,10-epoxycyclo[10.2.2.0.0]hexadeca-4,6,8,13-tetraene: a new intramolecular 1,5-oxygen migration

Bromination of 3,10-epoxycyclo[10.2.2.0^2,11.0^4,9]hexadeca-4,6,8,13-tetraene gave 13-bromo-11-oxapentacyclo[8.7.0.0^2,4.0^12,17]heptadeca-4,6,8-triene-3-ol, 12-bromo-1,2,3,4-tetrahydro-1,4-ethano-antracen-11-ol, 13-hydroxy-3,14-dibromotetracyclo[10.2.2.0^2,11.0^4,9]hexadeca-2,4,6,8,10-pentaene, and 13-hydroxy-3,10,14-tribromotetracyclo[10.2.2.0^2,11.0^4,9]hexadeca-2,4,6,8,10-pentaene by cleavage of the carbon–oxygen bonds and intramolecular 1,5-migration of the oxygen atom of 1,4-epoxide. Reactions of epoxide 14,18-dioxahexacyclo[10.3.2.1^3,10.0^2,11.0^4,9.0^13,15]octadeca-4,6,8-triene obtained from 3,10-epoxycyclo[10.2.2.0^2,11.0^4,9]hexadeca-4,6,8,13-tetraene gave also similar products, in acidic media. Compound 3,10-epoxycyclo[10.2.2.0^2,11.0^4,9]hexadeca-4,6,8,13-tetraene was converted into tetracyclo[10.2.2.0^2,11.0^4,9]hexadeca-2(11),3,9-triene in two ways. The reactions, especially intramolecular oxygen migration, are discussed.     

Investigations of gas-phase lithium-peptide adducts: Tandem. mass spectrometry and semiempirical studies

Tandem mass spectrometry using a hybrid mass spectrometer of BEqQ geometry was used to investigate the gas-phase formation of the [A_n + Li− H]⁺ ion from lithium-peptide adducts. High resolution mass measurements as well as precursor and product ion scans of five peptides indicate that one source of [A_n + Li− H]⁺ arises from [A_n + Li]⁺. Semiempirical calculations (MNDO) and metastable ion decomposition studies of the peptide Gly-Gly-Gly show that the lithium ion prefers to coordinate to the three internal carbonyls of the neutral molecule to give a species that is energetically more stable than the lithiated zwitterion by 305 kJ/mol. Theoretical and experimental evidence suggest that the monolithiated precursor ion population may be a distribution of structural isomers.     

A new approach to all—cis triquinane synthesis and a new route to the C16—hexaquinane system

A new synthesis of all-cis triquinanes is presented. The examples bear a cis substituent on the fifth position of the central ring, and are thus all-cis pentasubstituted cyclopentanes. The stereo-controlled addition of organometallics of 7-ketonorbornenes is considered, as is “reductive solvolysis” of such adducts to the corresponding hydrocarbons. The preparation of trans-3,4-dimethoxycyclopentyl chloride is given, as is that of the corresponding organolithium. The use of quinoxaline derivatives in aldol-type reactions is considered, with examples. A new approach to the C₁₆-hexaquinane system is developed. The ring systems reported include: tricyclo-[8.2.1.0^2,9]tridecane, tricyclo[6.3.0.0^3,7]undecane, tetracyclo-[10.1.0.0^2,9.0^10,13]tridecane, pentacyclo[8.5.1.0^2,6.0^7,16.0^11,15]hexadene and hexacyclo(8.5.1.0^2,6.0^3,14.0^7,16.0^11,15]hexadecane.     

Sulfate/Bisulfate Adsorption at the Pt(111) Surface

The cyclic voltammograms of Pt(111) electrode in sulfuric acid solutions display an anomalous wave and a unique butterfly peak. Extensive studies have been made to investigate these unique features since the advent of the flame annealing technique in 1980^[1]. Yet, the assignment of these features to sulfate^[2] or bisulfate^[3] adsorption is still full of controversy and no conclusive evidence has been reported in the literature.     

A novel entry into a new class of spiroheterocyclic framework: regioselective synthesis of dispiro[oxindole-cyclohexanone]pyrrolidines and dispiro[oxindole-hexahydroindazole]pyrrolidines

2,6-Bis(arylmethylidene)cyclohexanones undergo a regioselective 1,3-dipolar cycloaddition reaction with the azomethine ylide derived from isatin and sarcosine by a decarboxylative route affording a series of 1-N-methyl-spiro[2.3¹]oxindole-spiro[3.2¹¹]6¹¹-arylmethylidenecyclohexanone-4-aryl-pyrrolidines which were further annulated to give a series of novel 1-N-methyl-spiro[2.3¹]oxindole-spiro[3.7¹¹](3¹¹-aryl)Δ^111,711a-hexahydro-2H-indazole-4-aryl-pyrrolidines. The structures of which were established by spectroscopic techniques as well as single crystal X-ray analysis.     

Studies on the oxidation of Cu complexes of quadridentate Schiff bases derived from salicylaldehyde or ortho-aminophenol

The oxidation of various [CuL] (where L are the dianions of quadridentate Schiff bases derived from salicylaldehyde, and 1,2-diaminoethane, namely 2,2′-[1,2-ethanediylbis(nitrilomethylidene)diphenatol], salen, its 1,3-propane homologue, saltn, or from glyoxal and ortho-aminphenol, namely 2,2′-[(ethanediimine)diphenato], glyaph, as well as some of their analogues) has been studied by cyclic voltammetry. Anodic sweeps show one, or two, usually irreversible, oxidation peaks originated by the presence of Cu^II, since neither LH₂ nor [ZnL] are oxidized under the same conditions. The oxidations of the 5-NO₂-substituted derivatives are reversible at high scan rate (1 V s⁻¹). The oxidation potentials of the complexes with substituents at the aromatic rings suggest that the electronic influence of such substituents are transmitted to the metal centre via the phenato, rather than the azomethine groups. The glyaph and saltn derivatives are oxidized at potentials higher than the corresponding salen complexes. Electronic and ESR spectroscopy studies on [CuL] samples, oxidized with a H₂O₂/H₅IO₆ mixture, suggest that the initially formed [Cu^IIIL]⁺ rapidly decomposes to Cu^II species, presumably through [Cu(II)0L ·]⁺ intermediates. Some poorly stable complexes of the formula [CuL]HSO₄·2H₂O have been isolated.     

Involvement of unusual noncovalent interactions in the self-assembly of cucurbit[6]uril with[CdCl4]2- anions

The [CdCl_4]~(2-) anion as a structure inducer has proved to be useful in the construction of cucurbit[n]urilmetal coordination architectures and materials. In order to better understand the role and influence of the structure inducer in Q[n] systems, we report herein the self-assembly of Q[6] solely in the presence of[CdCl_4]~(2-)anions and in the presence of both a linear cationic organic guest and [CdCl_4]~(2-)anions. X-ray diffraction analysis revealed that 1D Q[6] porous channels were formed by the noncovalent interactions between Q[6] and [CdCl_4]~(2-)anions, but the ‘‘honeycomb effect' was not observed in the present study.However, it seems that the ‘‘honeycomb effect' and the self-assembly of Q[6] with [CdCl_4]~(2-)anions can be significantly modified and switched in the presence of a linear cationic dibutylamine guest through some unusual noncovalent interactions.     

Hydrothermal Synthesis,Structure and Properties of a New Phosphomolybdate Based on Novel [Co(H2O)4(HP2Mo5O23)]8- Anions and [H8(H2O)16]8+ Water Cluster Cations

A pure inorganic [P₂Mo₅O₂₃]^6- based cobalt complex [H₈(H₂O)₁₆][Co(H₂O)₄(HP₂Mo₅O₂₃)₂] with a sandglass-like shape was synthesized and characterized by means of single-crystal X-ray diffraction, powder X-ray diffraction(PXRD), infrared spectroscopy(IR), thermogravimetry/differential scanning calorimetry(TG/DSC), ultraviolet-visible spectroscopy(UV-Vis) and cyclic voltammogram(CV). Single-crystal X-ray diffraction analysis reveals that the asymmetric unit of compound 1 consists of a half cobalt ion, one [P₂Mo₅O₂₃]^6- anion, two coordinated water molecules and eight lattice water molecules. It is especially intriguing to note that two [P₂Mo₅O₂₃]^6- clusters are symmetrical about the Co ion, like a sandglass. And a chair-like water cluster with an unprecedented centrosymmetric [H₈(H₂O)₁₆]⁸⁺ can be observed in compound 1. Additionally, the electrochemical and catalytic properties of compound 1 were also investigated.     

Quantitative analysis of fluorimated ethylchloroformate derivatives of non-protein amino acids using positive and negative chemical ionization gas chromatography-mass spectometry

The GC-MS characterization of the ethylchloroformate derivatives of amino acids in an aqueous medium has been applied to non-protein amino acids. Derivatization of non-protein amino acids using ethylchloroformate, trifluoroethanol, and pyridine produced strong [M + 1]⁺ and [M - 1]⁻ ions in positive and negative chemical ionization (CI) modes, respectively. Twenty-one out of the twenty-three non-protein amino acids studied produced detectable ion chromatograms in both ionization modes when methane was used as the CI reagent gas. Mass spectra of these non-protein amino acid derivatives showed characteristic [M - 19]⁺, [M + 1]⁺, [M + 29]⁺, and [M + 41]⁺ peaks in the positive chemical ionization mode, and [M - 1]⁻, and [M + 35]⁻ peaks in the negative chemical ionization mode. The detection limits and the linear dynamic range of trifluorethanol ethylchloroformate derivatives of non-protein amino acids were studied using positive chemical ionization. The detection limits are mostly in the femtomole range.     

Isotopic exchange reactions between iron-sulphur-nitrosyl clusters and nitrite

The anion [Fe₄S₃(NO)₇]⁻ undergoes slow exchange with labelled nitrite [¹⁵NO₂]⁻ to yield a product [Fe₄S₃(¹⁴NO)(¹⁵NO)₆]⁻ in which complete isotopic exchange has occurred at the basal Fe(NO)₂ groups, but with no exchange at the apical Fe(NO) group. The neutral Fe₄S₄(NO)₄ reacts rapidly with [¹⁵NO₂⁻ to give fully exchanged [Fe₄S₃(¹⁵NO)₇]⁻, and it is proposed that the conversion proceeds by fragmentation, followed by complete isotopic exchange and rapid reassembly. The binuclear anion [Fe₂S₂(NO)₄]²⁻ also yields, with [¹⁵NO₂]²⁻ in CD₂Cl₂ solution, the fully exchanged [Fe₄S₃(¹⁵NO)₇]⁻, and a mechanism involving successive fragmentation, exchange and reassembly steps is proposed; however in aqueous solution, a clean exchange reaction occurs to give [Fe₂S₂(¹⁵NO)₄]²⁻. Neutral binuclear esters Fe₂(SR)₂(NO)₄ (R = Me, Et, or Ph) with [¹⁴NO₂]⁻ yield the mononuclear paramagnetic [Fe(¹⁴NO)₂(¹⁴NO₂)₂]⁻, and with [¹⁵NO₂]⁻ the analogous [Fe(¹⁵NO)₂(₁₅NO₂)₂]⁻.     

Role of the sulfhydryl group on the gas phase fragmentation reactions of protonated cysteine and cysteine containing peptides

The gas phase fragmentation reactions of protonated cysteine and cysteine-containing peptides have been studied using a combination of collisional activation in a tandem mass spectrometer and ab initio calculations [at the MP2(FC)/6-31G*//HF/6-31G* level of theory]. There are two major competing dissociation pathways for protonated cysteine involving: (i) loss of ammonia, and (ii) loss of the elements of [CH₂O₂]. MS/MS, MS/MS of selected ions formed by collisional activation in the electrospray ionization source as well as ab initio calculations have been carried out to determine the mechanisms of these reactions. The ab initio results reveal that the most stable [M + H − NH₃]⁺ isomer is an episulfonium ion (A), whereas the most stable [M + H − CH₂O₂]⁺ isomer is an immonium ion (B). The effect of the position of the cysteine residue on the fragmentation reactions of the [M + H]⁺ ions of all the possible simple dipeptide and tripeptide methyl esters containing one cysteine (where all other residues are glycine) has also been investigated. When cysteine is at the N-terminal position, NH₃ loss is observed, although the relative abundance of the resultant [M + H − NH₃]⁺ ion decreases with increasing peptide size. In contrast, when cysteine is at any other position, water loss is observed. The proposed mechanism for loss of H₂O is in competition with those channels leading to the formation of structurally relevant sequence ions.     

PMBP与中性磷萃取剂对铽(Ⅲ)的协同萃取

本文研究了1-苯基-3-甲基-4-苯甲酰基吡唑啉酮-5(PMBP)与丁基膦酸二丁酯(DBBP)或磷酸三丁酯(TBP)的氯苯溶液在硝酸介质中对铽(Ⅲ)的协同萃取。测得了萃合物的组成及其萃取平衡常数,讨论了萃合物的可能结构式及协同萃取机理。     

Das perfluortriazinium-kation als oxidationsmittel in der metallorganischen synthese—ein neuer weg zur darstellung von [Cp2MCl2](M = Mo

The oxidation of Cp₂MCl₂ (M= Mo, W) with perfluortriazinium tetrafluoroborate, [(FCN)₃F]⁺[BF₄]⁻, in the presence of a flouride ion acceptor (BF₃ or PF₅) in SO₂ solution yielded the cationic metallocene complexes [Cp₂MCl ₂]²⁺[BF₄]⁻ or [C_p2MCl₂] ²⁺[BF₄]⁻[PF₆]⁻ (M = Mo, W), respectively. In these reactions, for the first time the perfluortriazinium cation has proved to be easy to handle and a useful oxidizer in organometallic chemistry. The oxidizer strength of three fluorotriazinium cations, [(XCN)₃F]⁺ (X = F, Cl, H), has been computed ab initio (HF/6 − 31 + G) and calibrated on literature data which were obtained by local density functional calculations. It was anchored to its F⁺ zero point by an experimental value for KrF⁺. ab]Die Oxidation von Cp²MCl₂ mit (M = MO, W) Perfluortriaziniumtetrafluoroborat, [(FCN)₃F]⁺[BF₄]⁻, in Anwesenheit eines Fluoridionenakzeptors (BF₃ oder PF₅) führte in SO₂-Lösung zur Bildung der kationischen Metallocen-Komplexe [Cp₂MCl₂₊]²⁺[BF₄]₂⁻ bzw. [Cp₂MCl₂]²⁺[BF₄]⁻ [PF₆]⁻ (M = Mo, W). In diesen Reaktionen konnte erstmals gezeigt werden, daß Perfluortriazinium-Kationen einfach zu handhabende und nützliche Oxidationsmittel im Bereich der metallorganischen Synthese darstellen. Das (Mdationsvermögen von drei Fluorotriazinium-Kationen, [(XCN)₃F]⁺(X = F, Cl, H), wurde ab initio berechnet (HF/6 − 31 + G) und mit Hilfe von Literaturdaten, die mittels local density functional-Berechnungen erhalten und am experimentellen Wert von KrF ⁺ bezüglich des F⁺ Nullpunktes verankert wurden, kalibriert.     

Synthesis and crystal structure of the double barium-titanium methoxide [Ba2Ti4O(OMe)18(MeOH)7]·MeOH

The X-ray diffraction study of crystals isolated from solutions obtained by reaction of Ba(OMe)₂ with Ti(OMe)₄ (molar ratio 1:2) in methyl alcohol was carried out; the crystals of the methanol solvate of the double barium-titanium methoxide, [Ba₂Ti₄O(OMe)₁₈(MeOH)₇]·MeOH (1), contain two Ba²⁺ cations with different environments and two kinds of anionic binuclear titanium complexes with and without oxo-ligand, and thus can be formulated as [Ba(MeOH)₂]²⁺[Ba(MeOH)₅]²⁺[Ti₂O(OMe)₈]²⁻[Ti₂(OMe)₁₀]²⁻·MeOH.