A borderline case between meso and stable C1: an axially chiral, yet configurationally semi-stable biphenyl with two oppositely configured [10]paracyclophane portions

The synthesis of the bi[10]paracyclophanes 2 and 4 from the meso-configured bioxepine 3 is described. These compounds are stereochemically remarkable: the biaryl axis that connects the constitutionally identical, but oppositely configured planar-chiral paracyclophane portions, is configurationally semi-stable. Thus, 2 is an unprecedented borderline case of a (planar-chiral)-(axially chiral)-(planar-chiral) molecule that is right in between a meso-compound (as a macroscopical result of the—albeit slow—rotation about the central C,C-bond) and C₁-symmetry (with respect to the existence of separable—even though configurationally unstable—discrete atropo-enantiomers). Despite their restricted configurational stability, these atropo-enantiomers were resolved on a chiral phase at 5 °C and were stereochemically assigned by LC-CD coupling, in combination with quantum chemical CD calculations.     

Radical Ions of a Bishomobinaphthylene Containing two 1,6-methano[10]annulene moieties: An ESR and ENDOR study

The radical cation and the radical anion of ‘syn’-cyclobuta[1,2-c:3,4-c′]di-1,6-methano[10]annulene (‘syn’-4a,12a:6a, 10a-bishomobinaphthylene; 3 ) have been characterized by their hyperfine data. The highly resolved ESR spectrum of $ 3^{+ \atop \dot{}} $ is dominated by a triplet splitting from the outer pair of methano β-protons (H_o). In contrast, the ESR spectrum of $ 3^{- \atop \dot{}} $ is poorly resolved with the largest coupling constants arising from perimeter α-protons. The different hyperfine features of $ 3^{+ \atop \dot{}} $ and $ 3^{- \atop \dot{}} $ are rationalized by MO models. The SOMO of $ 3^{+ \atop \dot{}} $ ψ_SA(b₁), has substantial LCAO coefficients of the same sign at the bridged atoms C(1), C(6), C(11), and C(16), whereas in the SOMO of $ 3^{- \atop \dot{}} $, ψ_SS(a₁), the four atoms lie in the vertical nodal planes. The large width and the reluctance to saturation of the lines in the ESR spectrum of $ 3^{- \atop \dot{}} $ are attributed to the near-degeneracy of the lowest antibonding MO's. Due to their similar nodal properties, the SOMO's of $ 3^{- \atop \dot{}} $ and the radical anions of binaphthylene ( 4 ), 1,6-methano[10]annulene ( 1 ), and naphthalene ( 2 ) are interrelated. Moreover, because the cyclic π-systems in 3 and 1 deviate in the same way from planarity, the effect of such distortions on the coupling constants, a_Hμ, of the perimeter α-protons in $ 3^{- \atop \dot{}} $ and $ 1^{- \atop \dot{}} $ should be comparable. Indeed, on going from $ 4^{- \atop \dot{}} $ to $ 3^{- \atop \dot{}} $, the |a_Hμ| values are reduced exactaly by half as much as the corresponding values on passing from $ 2^{- \atop \dot{}} $ to $ 3^{- \atop \dot{}} $, of which the cyclic π-systems are twice contained in $ 4^{- \atop \dot{}} $ and $ 3^{- \atop \dot{}} $ respectively.     

Bridged bioxepines and bi[10]paracyclophanes—synthesis and absolute configuration of a bi[10]paracyclophane with two chiral planes and one chiral axis

A preparative synthesis of novel bioxepines and bi[10]paracyclophanes with meso- and rac-configuration is described. The bi[10]paracyclophane (−)-6b with two elements of planar chirality and one chiral axis has been obtained in enantiomerically pure form. Its absolute configuration was determined by quantum chemical calculation of the circular dichroism and comparison with the experimental CD spectrum.     

Stereochemistry of planarchiral compounds,part XII: Absolute chiralities and X-ray crystal structures of 2,2′-Bi(1,6-methano[10]annulenyl)s

Summary The absolute chirality of the dextrorotatory main rotamer of 10,10-dibromo-2,2-bi(1,6-methano[10]annulenyl) (1 b), obtained by low temperature chromatography or by crystallisation of the (+)-enantiomer of1 b, was established by observation of anomalous X-ray diffraction as (+)-(R) _p (R) _a (R) _p -1b. This result was confirmed by reduction of (+)-1 b to a dextrorotatory 2,2-bi(1,6-methano[10]annulenyl) (1 a), which in turn was accessible by coupling of (–)-2-Bromo-1,6-methano[10]annulene (3) of known chirality (S) _p and, moreover, by enantioselective chromatography of1 a on triacetyl cellulose in ethanol. This correlation determines also the chirality of (+)-1 a as (S) _p (S) _p .According to the X-ray analyses the main rotamer of (+)-1 b and the meso-form (2 b) adopt crystal structures in which the bromine atoms come close to the CH₂-bridges. The torsional angles around the 2,2-bonds vary between 33°, 53° and 65° for (+)-1 b, racem.1 b and the mesoform2 b, respectively.Dedicated to Prof. Dr. G. Snatzke (Bochum) with cordial wishes on the occasion of the 60th anniversary of his birthday     

Synthesis and absolute configuration of (1S,8S)-as-hydrindacene-1,8-diol as determined by the circular dichroism exciton chirality method

2,3,6,7-Tetrahydro-as-indacene-1,8-dione 4 was prepared in 4 steps starting from 2-methyl-furan by modification of a literature procedure. Appliance of Noyori’s asymmetric transfer hydrogenation, resulted in (1S,8S)-1,2,3,6,7,8-hexahydro-as-indacene-1,8-diol 5 in high yield (81%) and excellent enantioselectivity (>99% ee) or (8S)-8-hydroxy-3,6,7,8-tetrahydro-2H-as-indacen-1-one 6 in moderate yield (58%) and equally high enantioselectivity (98.5% ee), depending on the conditions. The asymmetric reduction was expected to yield the (S)-alcohols using the (S,S)-Ts-DPEN ligand, which was confirmed by the appliance of the exciton chirality method on the corresponding bis(p-dimethylamino)benzoate 7.     

Nickel-catalyzed coupling of bromides of 1,6-methano[10]annulene and azulene. A facile synthesis of biannulene and bi-, ter-, quater-, and polyazulenes

The active nickel complex generated in situ by reduction of NiBr₂(PPh₃)₂ with zinc in the presence of Et₄NI is a useful reagent for the dehalogenative coupling of 2-bromo-1,6- methano[10]annulene and 1-bromo- and 1,3-dibromoazulenes.     

一种苊并杂环有机小分子嵌入DNA的几何学模式研究

利用圆二色谱(CD)、紫外-可见吸收光谱以及荧光光谱等方法对苊并杂环化合物8-氧-8H-苊并[1,2-b]吡咯-9-腈(A1) 与小牛胸腺DNA(CT DNA) 的相互作用进行了研究. 结果表明, 随着n(A1)/n(CT DNA)的变化存在两种不同的几何学结合构型. 当n(A1)/n(CT DNA)值低于0.20时, A1分子与DNA的结合方式是不均一的, 化合物分子以多种角度嵌入到DNA碱基对之间. 表现为A1-DNA复合物的诱导圆二色光谱图上较小的正峰和紫外吸收光谱图缺省等吸收点. DNA的特征圆二色谱图表明, 在n(A1)/n(CT DNA)≤0.20范围内, CT DNA的构象从标准的B型转化为A-like型; 当n(A1)/n(CT DNA)>0.20时, 诱导圆二色光谱由正峰转变为强度大、波形复杂的负峰, 表明A1分子开始堆积到DNA螺旋的表面, 同时DNA的二级结构发生了进一步变化.     

Introduction of a planar chirality onto steroid substrates: synthesis of (S) and (R)-2′-formylcymantrenyl-17α-ethynylestradiols using (S) and (R)-1-formyl-2-iodo-cymantrenes

We report the synthesis and characterisation of (S) and (R)-2′-formylcymantrenyl-17α-ethynylestradiol synthesized using the Sonogashira cross-coupling reaction between optically pure (S) and (R) 1-formyl-2-iodo cymantrenes and ethynylestradiol. (S) and (R) 1-formyl-2-iodo cymantrenes were obtained from the same precursor: (2R,4R)-4-(methoxymethyl)-2-cymantrenyl-1,3-dioxane.     

Determination of molecular structure using vibrational circular dichroism spectroscopy: the keto-lactone product of Baeyer-Villiger oxidation of (+)-(1R,5S)-bicyclo[3.3.1]nonane-2,7-dione

[reaction: see text] The Baeyer-Villiger oxidation of (+)-(1R,5S)-bicyclo[3.3.1]nonane-2,7-dione, 1, can lead to four keto-lactone products, 2a-d. A single isomer is obtained experimentally. We have used IR and VCD spectroscopies to identify the structure of this product. DFT calculations of the IR and VCD spectra of 2a-d show unambiguously that the experimental product is (+)-(1R,6R)-2a, and not the expected product 2b. NMR studies, including comparison of DFT and experimental 1H and 13C spectra, support this conclusion. This work provides the first example of the use of VCD spectroscopy to discriminate between structural isomers of a chiral molecule. The specific rotation of (+)-(1R,6R)-2a, predicted using TDDFT methods, is negative demonstrating that absolute configurations determined from TDDFT calculations of specific rotations are not 100% reliable.     

Multivariate curve resolution applied to the simultaneous analysis of electrochemical and spectroscopic data: study of the Cd(II)/glutathione-fragment system by voltammetry and circular dichroism spectroscopy

Multivariate curve resolution with alternating least squares (MCR-ALS) is applied for the first time to the simultaneous analysis of electrochemical and spectroscopic data. Then, a data analysis is done with augmented matrices constituted by Differential Pulse Polarography and Circular Dichroism data submatrices. The use of proper, and different for each submatrix, constrains in the iterative ALS optimization allows to obtain chemically meaningful results constituted by a common matrix containing the concentration profiles, and two matrices with the pure electrochemical and spectroscopic signals. MCR-ALS is applied to the study of the complexation of Cd by Cys-Gly, a glutathione-fragment of great interest for understanding metal-phytochelatins complexation.     

Identification,synthesis and conformational study of a CN(R,S) synthon by-product: (5R, 10R)-5,10-diphenyl-1,6-diaza-3,8-dioxabicyclo[4.4.1]undecane

The title compound, containing a new heterocyclic skeleton, was identified by X-ray crystallography as the product of condensation of (R)-phenylglycinol with an excess of formaldehyde. The molecule adopts a rigid double twist-chair conformation in both solid and solution states.     

Synthesis and characterization of fluorous (S)- and (R)-1-phenylethylamines that effect heat facilitated resolution of (±)-2-(8-carboxy-1-naphthylsulfinyl)benzoic acid via diastereomeric salt formation and study of their circular dichroism

Perfluoroalkyl- or nonafluoro-tert-butoxy-alkyl-substituted enantiopure amines having the structure PhCHCH₃(NR¹R²) [R¹ = H, CH₃; R² = (CH₂)₃C₈F₁₇, (CH₂)₂OC(CF₃)₃; R¹ = R² = (CH₂)₃C₈F₁₇, (CH₂)₂OC(CF₃)₃] are obtained in high yields, when (S)-(−)-1-phenylethylamine is reacted with readily accessible alkylating reagents or fluorous 2° amines (R¹ = H; R² = (CH₂)₃C₈F₁₇, (CH₂)₂OC(CF₃)₃) are methylated in a Leuckart-Wallach reaction. The solubility patterns of these novel chiral amines and their hydrochlorides are qualitatively described for a broad spectrum of solvents and the fluorous partition coefficients of the free bases are determined by GC. A novel method for the resolution of enantiomers is disclosed here, which involves the use a half-equivalent of the selected resolving agent in solvent water that displays low solubility for the crystalline diastereomeric salt(s) formed even at temperatures near to its boiling point. Compound (S)-(−)-PhCHCH₃[NH(CH₂)₃C₈F₁₇] is found to satisfy all the latter conditions and successfully used for the heat facilitated resolution of the title racemic acid. The circular dichroism (CD) spectra of six novel fluorous (S)-(−)-1-phenylethylamine derivatives are measured in ethanol, trifluoroethanol and hexafluoropropan-2-ol and discussed in detail.     

A new efficient route to chiral 1,3-disubstituted ferrocenes: application to the syntheses of (R(p))- and (S(p))-17alpha-[(3'-formylferrocenyl)ethynyl]estradiol

Starting from (2S,4S)-2-ferrocenyl-4-(methoxymethyl)-1,3-dioxane (4), use of the stereogenic ortho-directing menthyl para-tolyl sulfoxide group, which occupies the 2' position in the ferrocenyl ring and redirects subsequent lithiation to the 3' position, allowed the synthesis of optically pure (S(p))-1-formyl-3-iodoferrocene (8), that was characterized by single-crystal X-ray diffraction. Combination of this method with a protection-deprotection strategy, using trimethylsilyl as a temporary blocking group, yielded (R(p))-1-formyl-3-iodoferrocene (13). Separate Sonogashira coupling of each of the enantiomeric iodoformylferrocenes 8 and 13 with 17alpha-ethynyl-estradiol produced (R(p))-17alpha-[(3'-formylferrocenyl)ethynyl]estradiol (14) and (S(p))-17alpha-[(3'-formylferrocenyl)ethynyl]estradiol (15), respectively.     

Synthesis and properties of 5-(2,3-diphenylcyclopropenylidene)-1,6-methano-2(5h)-[10]- annulenone (or 10,11-diphenyl-4,9-methano[3.10]quinaren-3-one). Contribution of a homobenzene structure annelated on [3.6]quinaren-3-one

The title quinarenone 2 has been prepared and proved that the three-membered ring possesses a larger diatropicity than diphenylcyclopropenone and the seven-membered ring exists in a cycloheptatriene (not norcaradiene) tautomer having a contribution of a homobenzene structure. The rotational barrier about the intercyclic bond of 2 is 13.3 Kcal/mol.     

Synthetic studies on pseudolaric acid B:Enantioselective synthesis of C4,C10-di-epi-trans-fused[5-7]-bicyclic skeleton

Studies on the synthesis of antifungal and anticancer natural product,pseudolaric acid B,have led to the enantioselective synthesis of di-epi-trans-fused [5-7]-bicyclic co re skeleton.The synthesis was achieved in 10 linear steps,which features the Sharpless asymmetric epoxidation,cyanide-opening reaction of epoxide,and intramolecular [5+2] cycloaddition reaction as the key transformations.The stereochemistry was determined by the X-ray crystallographic analysis.     

X-ray structure and circular dichroism of pure rotamers of bis[guanosine-5'-monophosphate(-1)](N,N,N',N'-tetramethylcyclohexyl-1,2-diamine)platinum(II) complexes that have R,R and S,S configurations at the asymmetric diamine

The use of a sterically hindered diamine ligand (Me(4)DACH) has allowed for the first time, the isolation and characterization, both in the solid state (X-ray crystallography) and in solution (circular dichroism), of pure DeltaHT rotamers of [Pt(Me(4)dach)(5'-GMP)(2)] (compounds 1 and 2 for R,R and S,S configurations of the Me(4)DACH ligand, respectively). Comparison of the CD spectra obtained for each rotamer, which differ only in the chirality of the Me(4)DACH ligand (R,R or S,S) or in the chirality of the HT conformation (Delta or Lambda), allowed us to conclude that, in the 200-350 nm range, the contributions to the overall CD spectrum that stem from diamine chirality and diamine-induced chirality of platinum d--d transitions or from sugar chirality are negligible relative to the exciton chiral coupling that occurs for pi-pi* transitions of the cis guanines. Accurate molecular structures of 1.10 D(2)O and 2.14 D(2)O (conventional crystallographic agreement indexes R(1) convergent to 2.07 % and 2.18 %, respectively) revealed that the crystallized rotamers have a DeltaHT conformation that is in agreement with all previously reported X-ray structures of [Pt(diamine)(nucleos(t)ide)(2)] complexes. This conformation allows the 5'-phosphate to be located in proximity to the Me(4)DACH ligand so that (P)O...HC(N) hydrogen-bond interactions exists in both complexes. For both structures, the canting of the guanine planes on the coordination plane is right-handed (R; canting angle (Phi) of 80.9 degrees and 73.2 degrees, respectively); this indicates that the canting direction is driven by the HT conformation chirality (Delta for both compounds) and not by the chirality of the carrier ligand (different for the two compounds). Density functional theory analysis of the conformational space as a function of Phi indicated a good agreement between the computed and experimental structures. The increase in energy for Phi values below 65 degrees and 55 degrees (for 1 and 2, respectively) is mainly due to the short intramolecular contacts between C(8)H and the cis N-Me groups on the same side of the platinum coordination plane.     

Wagner-Meerwein rearrangement of a [3.3.3]- to a [4.3.3]propellane: deuterium tracer and conformational analysis

Formation of (-)-[4.3.3]propellane 4 from (-)-14-hydroxymodhephene (2) proceeds through a Wagner-Meerwein rearrangement via C3--C4 bond-shift to give a stable intermediate, dimethylcyclohexadienyl cation A, which undergoes deprotonation. Herein, this mechanism was investigated by using a deuterium labeled substrate at the C-14 methylene group of (-)-2, which was incorporated into the C-4 position of (-)-[4.3.3]propellane 4. The stereostructure of (-)-4 was investigated by applying a combination of NMR experimental and theoretical approaches.