Ultrafast fluorescence resonance energy transfer in a reverse micelle: excitation wavelength dependence

Fluorescence resonance energy transfer (FRET) from coumarin 480 (C480) to fluorescein 548 (F548) in a sodium dioctyl sulfosuccinate (AOT) reverse micelle is studied by picosecond and femtosecond emission spectroscopy. In bulk water, at the low concentration of the donor (C480) and the acceptor (F548), no FRET is observed. However, when the donor (C480) and the acceptor (F548) are confined in a AOT reverse micelle very fast FRET is observed. The time constants of FRET were obtained from the rise time of the emission of the acceptor (F548). In a AOT microemulsion, FRET is found to occur in multiple time scales--3, 200, and 2700 ps. The 3 ps component is assigned to FRET in the water pool of the reverse micelle with a donor-acceptor distance, 16 A. The 200 ps component corresponds to a donor-acceptor distance of 30 A and is ascribed to the negatively charged acceptor inside the water pool and the neutral donor inside the alkyl chains of AOT. The very long 2700 ps component may arise due to FRET from a donor outside the micelle to an acceptor inside the water pool and also from diffusion of the donor from bulk heptane to the reverse micelle. With increase in the excitation wavelength from 375 to 405 nm the relative contribution of the FRET due to C480 in the AOT reverse micelle (the 3 and 200 ps components) increases.     

Normal-phase HPLC separation of possible biosynthetic intermediates of pheophytin a and chlorophyll a'.

Normal-phase HPLC conditions have been developed for separating the C17(3) isoprenoid isomers, which are expected to be formed as biosynthetic intermediates of chlorophyll (Chl) a, Chl a' (C13(2)-epimer of Chl a), pheophytin (Pheo) a and protochlorophyll (PChl). The application of these conditions to pigment composition analysis of greening etiolated barley leaves allowed us to detect, for the first time, the C17(3) isomers of Chl a', a possible constituent of the primary electron donor of photosystem (PS) I, P700, and those of Pheo a, the primary electron acceptor of PS II, in the very early stage of greening. The C17(3) isomer distribution patterns were approximately the same between Chl a and Chl a', but significantly different between Pheo a and Chl a', probably reflecting the similarity and difference, respectively, in the biosynthetic pathways of these pigment pairs.     

Evolution of fluorescence resonance energy transfer between close-packed CdSeS quantum dots under two-photon excitation

Energy transfer (ET) processes between quantum dots (QDS) were investigated by means of steady-state and time-resolved up-conversion luminescence measurements. Two types of CdSeS QDs with different Se/S molar ratios at the similar sizes of ~4.5 nm emit green and orange up-conversion luminescence at infrared laser excitation, separately. The power dependence and nanosecond luminescent decays of QDs films demonstrated that up-conversion luminescence was attributed to two-photon absorption and ET process occurred from green-emitting QDs to orange-emitting QDs. The ET rate was estimated quantitatively to be 0.03 ns(-1) by Dexter theory. The decrease of ET rate is due to Se doped substituted in the Sulfur sites. The band-edge excitonic state is predominating at the initial time evolution and responsible for peak shift and ET. The surface emission of orange-emitting QDs becomes slower, and is attributed to the trapping of electrons from QDs donors.     

Synthesis of proposed oxidation-cyclization-methylation intermediates of the coumarin antibiotic biosynthetic pathway

[structure: see text] A chemoenzymatic synthesis was described to prepare proposed oxidation-cyclization-methylation intermediates of the coumarin antibiotic biosynthetic pathway. The successful synthesis of these fragile molecules relies heavily on mild enzymatic deprotection and efficient enzymatic kinetic resolution to minimize epimerization, decomposition, multiple orthogonal protections, and retro aldol reactions often encountered in their chemical synthesis.     

Rate of excitation energy transfer between fluorescent dyes and nanoparticles

Because of the sensitivity of the rate of Coulomb interaction induced long range resonance energy transfer (RET) on the distance between the donor (D) and the acceptor (A) molecules, the technique of FRET (fluorescence resonance energy transfer) is popularly termed as “spectroscopic ruler” and is increasingly being used in many areas of biological and material science. For example, the phenomenon is used to monitor the in vivo separation between different (bio)polymers/units of (bio)polymers and hence the dynamics of various biomolecular processes. In this work, we examine the distance and the orientation dependence of RET in three different systems: (i) between a conjugated polymer and a fluorescent dye, (ii) between a nanometal particle (NMP) and a fluorescent dye and (iii) between two NMP. We show that in all the three cases, the rate of RET follows a distance dependence of d^−σ where exponent σ approaches 6 at large distance d (Förster type dependence) but has a value varying from 3–4 at short to intermediate distances.     

Electronic excitation energy transfer between nucleobases of natural DNA

Transfer of the electronic excitation energy in calf thymus DNA is studied by time-resolved fluorescence spectroscopy. The fluorescence anisotropy, after an initial decay starting on the femtosecond time scale, dwindles down to ca. 0.1. The in-plane depolarized fluorescence decays are described by a stretched exponential law. Our observations are consistent with one-dimensional transfer mediated by charge-transfer excited states.     

Ultrafast fluorescence resonance energy transfer in the micelle and the gel phase of a PEO-PPO-PEO triblock copolymer: excitation wavelength dependence

Fluorescence resonance energy transfer (FRET) from coumarin 480 (C480) to rhodamine 6G (R6G) is studied in the micelle and the gel phase of a triblock copolymer, (PEO)20-(PPO)70-(PEO)20 (Pluronic P123 (P123)) by picosecond and femtosecond emission spectroscopy. The time constants of FRET were obtained from the rise time of the acceptor (R6G) emission. In a P123 micelle, FRET occurs in multiple time scales: 2.5, 100, and 1700 ps. In the gel phase, three rise components are observed: 3, 150, and 2600 ps. According to a simple F?rster model, the ultrafast (2.5 and 3 ps) components of FRET correspond to donor-acceptor distance RDA=13 +/- 2 A. The ultrafast FRET occurs between a donor and an acceptor residing at close contact at the corona (PEO) region of a P123 micelle. With increase in the excitation wavelength (lambdaex) from 375 to 435 nm, the relative contribution of the ultrafast component of FRET ( approximately 3 ps) increases from 13% to 100% in P123 micelle and from 1% to 100% in P123 gel. It is suggested that at lambdaex = 435 nm, mainly the highly polar peripheral region is probed where FRET is very fast due to close proximity of the donor and the acceptor. The 100 and 150 ps components correspond to RDA = 25 +/- 2 A and are ascribed to FRET from C480 deep inside the micelle to an acceptor (R6G) in the peripheral region. The very long component of FRET (1700 ps in micelle and 2600 ps component in gel) may arise from diffusion of the donor from outside the micelle to the interior followed by fast FRET.     

Stereochemical assignment of intermediates in the rifamycin biosynthetic pathway by precursor-directed biosynthesis

Natural and semisynthetic rifamycins are clinically important inhibitors of bacterial DNA-dependent RNA polymerase. Although the polyketide-nonribosomal peptide origin of the naphthalene core of rifamycin B is well established, the absolute and relative configuration of both stereocenters introduced by the first polyketide synthase module is obscured by aromatization of the naphthalene ring. To decode the stereochemistry of the rifamycin polyketide precursor, we synthesized all four diastereomers of the biosynthetic substrate for module 2 of the rifamycin synthetase in the form of their N-acetylcysteamine (SNAC) thioester. Only one diastereomer was turned over in vivo into rifamycin B, thus establishing the absolute and relative configuration of the native biosynthetic intermediates.     

Quantum efficiency improvement of a cesium based resonance fluorescence detector by helium-induced collisional excitation energy transfer

Quantum efficiency improvement of a cesium based resonance fluorescence detector (RFD) was achieved by enhancing the transfer in a particular channel of the RFD excitation scheme with noble gas-induced collisional excitation energy transfer (CEET). The influence of Cs–Ar and Cs–He collisional mixing between the 6D and 7P states in cesium on the quantum efficiency of the 6S → 6D → 7P → 6S excitation scheme was investigated by fluorescence measurements at relevant transitions. Ar-induced CEET was found to have little effect on the fluorescence response and quantum efficiency of the Cs RFD excitation scheme. However, a 35 fold quantum efficiency increase in the cesium resonance fluorescence detector response at only moderate He pressures was observed.     

Immobilization of chlorophyll derivatives into mesoporous silica and energy transfer between the chromophores in mesopores

Chlorophyll derivatives possessing triethoxysilyl groups have been synthesized for the first time and grafted on mesoporous silica to construct an efficient energy transfer system between the chromophores.     

Synthesis and excited-state photodynamics of a chlorin-bacteriochlorin dyad--through-space versus through-bond energy transfer in tetrapyrrole arrays.

Understanding energy transfer among hydroporphyrins is of fundamental interest and essential for a wide variety of photochemical applications. Toward this goal, a synthetic free base ethynylphenylchlorin has been coupled with a synthetic free base bromobacteriochlorin to give a phenylethyne-linked chlorin-bacteriochlorin dyad (FbC-pe-FbB). The chlorin and bacteriochlorin are each stable toward adventitious oxidation because of the presence of a geminal dimethyl group in each reduced pyrrole ring. A combination of static and transient optical spectroscopic studies indicate that excitation into the Qy band of the chlorin constituent (675 nm) of FbC-pe-FbB in toluene results in rapid energy transfer to the bacteriochlorin constituent with a rate of approximately (5 ps)(-1) and efficiency of >99%. The excited bacteriochlorin resulting from the energy-transfer process in FbC-pe-FbB has essentially the same fluorescence characteristics as an isolated monomeric reference compound, namely a narrow (12 nm fwhm) fluorescence emission band at 760 nm and a long-lived (5.4 ns) Qy excited state that exhibits a significant fluorescence quantum yield (Phif=0.19). F?rster calculations are consistent with energy transfer in FbC-pe-FbB occurring predominantly by a through-space mechanism. The energy-transfer characteristics of FbC-pe-FbB are compared with those previously obtained for analogous phenylethyne-linked dyads consisting of two porphyrins or two oxochlorins. The comparisons among the sets of dyads are facilitated by density functional theory calculations that elucidate the molecular-orbital characteristics of the energy donor and acceptor constituents. The electron-density distributions in the frontier molecular orbitals provide insights into the through-bond electronic interactions that can also contribute to the energy-transfer process in the different types of dyads.     

Dipole-dipole transfer between acetone solvates of chlorophyll a and chlorophyll a dihydrate dimers in water/acetone mixtures. A model for P680 sensitized excitation

We describe a simple model for P680 sensitized excitation in photosynthesis. Chl a fluorescence quenching effects observed when water is added to Chl a solutions in acetone are shown to be the result of resonant transfer between acetone solvates of monomeric Chl a, Chl a·Ac, and dimers of Chl a dihydrate. The presence of (Chl a·2H₂O)₂ is evidenced by a 678 nm difference absorbance (ΔA band obtained on conversion of a 680 nm absorption shoulder to polycrystalline Chl a precipitate, (Chl a·H₂O)_n. The equilibration between (Chl a·2H₂O)₂ and Chl a·Ac as a principal mechanism for Chl a·Ac fluorescence quenching is supported by theoretical fits of the data.     

Photoinduced electron transfer between chlorophyll a and gold nanoparticles

Excited-state interactions between chlorophyll a (Chla) and gold nanoparticles have been studied. The emission intensity of Chla is quenched by gold nanoparticles. The dominant process for this quenching has been attributed to the process of photoinduced electron transfer from excited Chla to gold nanoparticles, although because of a small overlap between fluorescence of Chla and absorption of gold nanoparticles, the energy-transfer process cannot be ruled out. Photoinduced electron-transfer mechanism is supported by the electrochemical modulation of fluorescence of Chla. In absence of an applied bias, Chla cast on gold film, as a result of electron transfer, exhibits a very weak fluorescence. However, upon negatively charging the gold nanocore by external bias, an increase in fluorescence intensity is observed. The negatively charged gold nanoparticles create a barrier and suppress the electron-transfer process from excited Chla to gold nanoparticles, resulting in an increase in radiative process. Nanosecond laser flash experiments of Chla in the presence of gold nanoparticles and fullerene (C60) have demonstrated that Au nanoparticles, besides accepting electrons, can also mediate or shuttle electrons to another acceptor. Taking advantage of these properties of gold nanoparticles, a photoelectrochemical cell based on Chla and gold nanoparticles is constructed. A superior performance of this cell compared to that without the gold film is due to the beneficial role of gold nanoparticles in accepting and shuttling the photogenerated electrons in Chla to the collecting electrode, leading to an enhancement in charge separation efficiency.     

Evidence against reversible triplet energy transfer between acetophenone and norbornene

Kinetic absorption and emission spectroscopy has been used to monitor the decay of triplet acetophenone produced in benzene by both pulse radiolysis and pulse laser photolysis techniques. The dependence of this decay on the concentrations of norbornene and acetophenone shows that, in contrast to a previous claim, triplet energy transfer between acetophenone and norbornene is not reversible. These data, together with quantum yield measurements, indicate that in this system ground state acetophenone quenches triplet acetophenone and either triplet norbornene or a ketone triplet—olefin exciplex by processes which do not involve energy transfer.     

Theory of excitation energy transfer regarded as nonadiabatic transition 2: Calculational evidence of nonadiabatic interaction causing intermolecular excitation energy transfer

To clarify whether the excitation energy transfer from a donor molecule or aggregate to a remote acceptor molecule or aggregate can be caused by nonadiabatic interaction as expected in our previous studies 4 ; 5 , we carried out ab initio calculations for three donor–acceptor systems. Even when the acceptor is separated from the donor by 15 Å, it was found that nonadiabatic coupling elements have moderately large values in the nuclear configuration region where the potential energy surfaces at two excited states for the donor–acceptor system are close to each other; otherwise, the conical intersection between the two excited‐state potential energy surfaces appears. In addition, it was found that the adiabatic approximation for the donor–acceptor system holds in the nuclear configuration region in which the initial and final wave packets in the process of the excitation energy transfer lie. These findings lead to the conclusion that the excitation energy transfer between two remote molecules or aggregates can be caused by the nonadiabatic interaction. © 2003 Wiley Periodicals, Inc. Int J Quantum Chem 94: 36–43, 2003     

Photophysical hole burning in the resonance Raman excitation profile of the chlorophyll a dimer in solution

The Raman excitation profiles of normal modes of chlorophyll a dimers in hexane exhibit sharp minima between 427 and 450 nm. In this spectral range, a non-linear relationship between the Raman intensifies and the intensity of the pulsed laser is observed. These non-linearities indicate population of lower-lying excited states of the chlorophyll a dimer. The Raman scaterring from these excited states is weaker than the rigorous resonance-enhanced Raman scattering from the ground states, which leads to the observed minima.     

Liquid chromatography and mass spectrometry of haem biosynthetic intermediates: a review

This article discusses the separation, analysis and characterisation of intermediates and oxidative by-products of the haem biosynthetic pathway by liquid chromatography and mass spectrometry. Techniques reviewed include high-performance liquid chromatography, ultra-high-performance liquid chromatography, capillary electrophoresis, ion mobility spectrometry, mass spectrometry and tandem mass spectrometry. The emphasis was on the analysis of biological and clinical samples.     

Efficient fluorescence resonance energy transfer between upconversion nanophosphors and graphene oxide: a highly sensitive biosensing platform

Graphene oxide can act as an ultrahighly efficient quencher for upconversion nanophosphors and thus, an extraordinarily sensitive biosensing platform is constructed.     

Fluorescence resonance energy transfer between a quantum dot donor and a dye acceptor attached to DNA

We show that direct coupling of a dye-labelled DNA (acceptor) to a quantum dot (QD) donor significantly reduces the donor-acceptor distance and improves the FRET efficiency: a highly efficient FRET (approximately 88%) at a low acceptor-to-donor ratio of 2 has been achieved at the single-molecule level.