Ligand functionalization as a deactivation pathway in a fac-Ir(ppy)3-mediated radical addition

Knowledge of the kinetic behavior of catalysts under synthetically relevant conditions is vital for the efficient use of compounds that mediate important transformations regardless of their composition or driving force. In particular, these data are of great importance to add perspective to the growing number of applications of photoactive transition metal complexes. Here we present kinetic, synthetic, and spectroscopic evidence of the mechanistic behavior of fac-Ir(ppy)₃ in a visible light-mediated radical addition to 3-methylindole, demonstrating the instability of fac-Ir(ppy)₃ under these conditions. During the reaction, rapid in situ functionalization of the photocatalyst occurs, eventually leading to deactivation. These findings demonstrate a conceivable deactivation process for catalytic single electron reactions in the presence of radicophilic ligands. Attempts to inhibit photocatalyst deactivation through structural modification provide further insight into catalyst selection for a given system of interest.     

Theoretical study on the absorption spectra of pseudoisocyanine bromide (PIC-Br) molecular J-aggregates

The linear dichroic absorption spectrum of pseudoisocyanine bromide (PIC-Br) molecular J-aggregates is theoretically analyzed by using the dynamical coherent potential approximation and numerical calculations. The absorption spectra with the electric field polarization parallel and perpendicular to the one-dimensional axis of the oriented J-aggregates are well explained in terms of Davydov components. Above the one-phonon continuum in the dispersion curve of the exciton–phonon system, splitting off of an exciton polaron band is observed. This exciton polaron state is assigned to the largest peak in the case of the latter polarization. The absorption intensity differences between the lowest peak and the 2nd peak observed in two polarization conditions are simply explained by the character of relevant states.     

Theoretical study of the polarized electronic absorption spectra of vanadium-doped zircon

The polarized electronic absorption spectra of a blue vanadium-doped zircon single crystal, grown by the flux method, has been studied by quantum chemical (CI) calculations in order to determine the position of the V⁴⁺ dopant in the zircon host structure. Particularly, the excitation energies and polarizations of V⁴⁺ occupying alternate positions, either the zirconium or silicon position or the interstitial site 16g, have been considered. It is concluded that the observed electronic absorption spectra and the color of zirconblue can only be explained if the V⁴⁺ chromophore is placed on the respective interstitial position.     

Theoretical study of the Raman optical activity spectra of 3(10)-helical polypeptides

Raman optical activity (ROA) spectroscopy is a promising analytical method for studying the structure and conformation of polypeptides and proteins in solution. However, the structural information obtained from such vibrational spectra is only indirect and theoretical studies are often necessary to identify how the structure determines the observed spectra. One particular target is the identification and discrimination of different helical secondary structure elements. Herein, a theoretical investigation of the ROA spectra of a series of 3(10)-helical polypeptides is presented. In particular, the effect of chain length, C(α)-substitution pattern, the introduction of larger aliphatic side chains, and the variation of their conformation on the ROA spectra is studied. To extract general principles from these calculations, the positions, intensities, and shapes of the ROA bands are analyzed in terms of localized modes, which makes it possible to identify possible ROA signatures of 3(10) -helical structures, but also provides fundamental insight into the generation of ROA signals in complex polypeptides. Finally, the calculated spectra can be compared to the previously reported ROA spectrum of a specifically designed 3(10) -helical heptapeptide. This allows most of the features in the experimental spectrum to be assigned.     

8-甲硫基喹啉及其两种衍生物UV-Vis光谱的理论研究

The ground state structures of 8-methylthioquinoline and its two absorption spectra were calculated using TD-DFT method.Calculation results agree with experimental values.Calculation results indicate that the position of lowest-energy absorption bands will be red-shifted and blue-shifted,when one hydrogen atom of methyl group is substituted by -Si(CH3)3 and -Si(OCH3)3 groups,respectively.And the energies of HOMO and LUMO of substitutents increase to a different extent,and the position of lowest-energy absorption bands and the energy gap vary slightly.     

Theoretical determination of the infrared spectra of amorphous polymers

The simple procedure of calculating the infrared spectra of polymers is presented. It is based on selecting the relevant, medium-size representative fragments of a polymer, for which the vibrational frequencies are computed within the harmonic approximation, in conjunction with the multiparameter scaling techniques. Scaling is necessary to predict the reliable fundamentals, which, along with the calculated intensities and properly chosen band widths, reproduce the observed band shapes with high accuracy. Applications to the three polymers: poly(methyl methacrylate), poly(vinyl acetate), and poly(isopropenyl acetate) are presented. The simulated spectra are in good agreement with the experiment. The assignment of bands is reported. The obtained results indicate strong delocalization of the vibrational modes within polymers, which is in accord with the most recent experimental finding [Macromolecules2008, 41, 2494-2501]. Good agreement between the observed and the calculated spectra of deuterated PMMA confirms the correctness of our approach. The preliminary results obtained for the highly irregular macromolecular compound (vinyl-functionalized silica) are also shown.     

Theoretical studies of electronic absorption and emission spectra of Pt(saloph)

The performance of ab initio calculations for the ground and excited states of the Pt(saloph) complex is examined in detail. The S₀–S_i and T₁–T_i absorption spectra are calculated, and the transition between the ground S₀ state and the excited S₁ state involves the HOMO-2, HOMO-1, HOMO and LUMO. Moreover, calculations show that the emissive singlet is of mixed MLCT/LLCT characteristic. On the other hand, the molecular geometry of the complex is nearly planar in the ground state while the geometry is obviously nonplanar in the excited state of S₁(π, π^*) in the gas phase.     

Theoretical study of absorption and emission spectra of the monomer of PFBT

Conjugated polymers (CPs) have been used as highly responsive optical sensors for chemical and biological targets. The density functional theory (DFT), the time-dependent density functional theory (TDDFT) and the singly excited configuration interaction (CIS) approach were employed to simulate the absorption and emission spectra of a model monomer unit of the typical CP, poly[9,9′-bis-(6′-N,N,N-trimethylammonium)hexyl]fluorene-alt-4,7-(2,1,3-benzothiadiazole)] (PFBT). Various basis sets were applied in the calculations and their effects on the predictions for the optical properties of FBT are discussed. The results suggest that the TD-B3LYP method with basis sets larger than 6-311G(d,p) provides a suitable approach for investigations of the studied system.     

Theoretical study of solvent influence on the electronic absorption and emission spectra of kynurenine

Neutral/zwitterionic form equilibrium, excited state wave functions, absorption and emission spectra of kynurenine (KN) in various solvents (water, methanol, ethanol, and dimethylsulfoxide) have been studied theoretically. The ground electronic state geometries have been optimized by density functional theory methods; the geometries of the first two singlets excited electronic states have been optimized using the CASSCF technique. The influence of the solvent was taken into account by the calculation of the solvation free energies using the Polarizable Continuum Model (PCM). The spectra of electronic absorption and fluorescence emission have been calculated by the CS‐INDO S‐CI and SDT‐CI methods [Momicchioli, Baraldi, and Bruni, Chem Phys, 1983, 82, 229]. The calculated data reproduce the experimental positions of maxima and the solvent‐induced shifts of the absorption and emission bands well. The energy gap between the two lowest excited states of KN increases from aprotic to protic solvents. This fact suggests that the “proximity effect” cannot be responsible for the ultrafast decay of KN fluorescence in protic solvents. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

三种黄酮类化合物的电子吸收光谱的理论研究

黄酮类化合物普遍存在于天然产物中,具有多种生理活性.本文中我们用密度泛函理论优化了3种黄酮类化合物的几何结构,用含时密度泛函理论计算了它们的垂直激发能,并拟合了它们的电子吸收光谱,同时还预测了它们的抗氧化活性.结果表明,拟合的光谱与实验光谱符合较好,很好地解释了实验光谱;3种黄酮类化合物的抗氧化活性均高于维生素C.     

Theoretical study of absorption and fluorescence spectra of firefly luciferin in aqueous solutions

The absorption and fluorescence spectra of firefly luciferin, which is an analog of oxyluciferin, are investigated by performing the density functional theory (DFT) calculations, especially focusing on the experimentally unassigned peaks. Time-dependent DFT calculations are performed for the excited states of firefly luciferin and its conjugate acids and bases. We find that (1) the peaks in the experimental absorption spectra correspond to the excited states of not only (6'O(-), 4COO(-)) and (6'OH, 4COO(-)), but also (6'OH, 4COOH) and (6'OH, 3H(+), 4COOH); (2) the peaks in the experimental fluorescence spectra correspond to the excited states of not only (6'O(-), 4COO(-)), but also (6'OH, 4COO(-)), (6'O(-), 4COOH), (6'OH, 4COOH) and (6'OH, 3H(+), 4COOH); (3) the unassigned peak near 400 nm in the experimental absorption spectra at pH 1 is assigned to the absorption from the equilibrium ground state to the first excited state of (6'OH, 3H(+), 4COOH); and (4) the unassigned peak at 610 nm in the experimental fluorescence spectra corresponds to the transition from the equilibrium first excited state to the ground state of (6'OH, 4COO(-)).     

The electronic absorption spectra of the alkyl-substituted derivatives of bis(benzene)chromium(0) in the vapour phase

The UV and visible absorption spectra of (arene)₂chromium(0) (arene = benzene (I), toluene (II), ethylbenzene (III), cumene (IV), tert-butylbenzene (V), mesitylene (VI) in the vapour phase have been investigated. Four band systems A,B,C and D are revealed in the spectra. The bands of the system with the shortest wavelengths, D, represent the Rydberg series. The first ionisation potentials IP_a1g, 5.18 and 5.01 eV respectively. The Rydberg bands correspond to the allowed electrodipole transitions from the highest occupied molecular orbital (MO) a_1g to the vacant MO of either the a_2u or e_1u type.System C corresponds to the intense band of the solution spectra. The electronic transition e_2g → e_2g obviously makes a great contribution to this system. System B is assigned to the transition from a_1g to vacant a_2u or e_1u MO, which can be Rydberg orbitals. System A can be assigned to the a_1g → e_2u transition or to the Rydberg transition, which is forbidden in the D_6h point group but becomes allowed upon reduction of symmetry.     

Absorption and emission spectroscopic characterization of Ir(ppy)3

The absorption and emission spectroscopic behaviour of cyclometalated fac-tris(2-phenylpyridine) iridium(III) [Ir(ppy)₃] is studied at room temperature. Liquid solutions, doped films, and neat films are investigated. The absorption cross-section spectra including singlet–triplet absorption, the triplet–singlet stimulated emission cross-section spectra, the phosphorescence quantum distributions, the phosphorescence quantum yields and the phosphorescence signal decays are determined. In neat films fluorescence self-quenching occurs, in diluted solid solution (polystyrene and dicarbazole-biphenyl films) as well as deaerated liquid solution (toluene) high phosphorescence quantum yields are obtained, and in air-saturated liquid solutions (chloroform, toluene, tetrahydrofuran) the phosphorescence efficiency is reduced by triplet oxygen quenching. At intense short-pulse laser excitation the phosphorescence lifetime is shortened by triplet–triplet annihilation. No amplification of spontaneous emission in the phosphorescence spectral region was observed indicating higher excited-state absorption than stimulated emission.     

Theoretical study of the vibrational spectra of the hydrogen-bonded systems between pyridine-3-carboxamide (nicotinamide) and DMSO

The vibrational characteristics (vibrational frequencies and infrared intensities) for the hydrogen-bonded systems of nicotinamide (NA(Z) and NA(E)) with dimethyl sulfoxide (DMSO) have been predicted using ab initio SCF/6-31G(d,p) and DFT (BLYP/6-311++G(d,p)) calculations. The changes in the vibrational characteristics from free monomers to a complex have been calculated. The ab initio and BLYP calculations show that the complexation between nicotinamide (NA(Z) and NA(E)) and DMSO leads to large red shifts of the stretching vibrations for the hydrogen-bonded N-H bonds of nicotinamide and very strong increase in their IR intensity. The results from the BLYP/6-311++G(d,p) calculations show that the predicted red shifts of the nu(s)(NH) and nu(as)(NH) vibrations for the complex NA(E)-DMSO (1:2) (Deltanu(as)(NH)=-186 cm(-1) and Deltanu(s)(NH)=-198 cm(-1)) are in better agreement with the experimentally measured. The magnitudes of the wavenumber shifts are indicative of strong NH...O hydrogen-bonded interactions in both complexes. The calculations predict an increase of the IR intensity of nu(s)(NH) and nu(as)(NH) vibrations in the complexes up to 14 times. Having in mind that in more cases the predicted changes in the vibrational characteristics for the complexes studied are very near, it could be concluded that both conformers of nicotinamide, Z-conformer and E-conformer, are present in the solution forming the hydrogen-bonded complexes with DMSO.     

Theoretical insights into the visible near‐infrared absorption spectra of Bis(hexafluoroacetylacetonate) copper(II) in pyridine

The density functional theory calculations were performed to investigate the specific solvent effects on the optical absorption spectrum of copper(II) hexafluoroacetylacetonate complex in pyridine. The effects of single and double coordination of pyridine molecules at axial position of bis(hexafluoroacetylacetonate) copper(II) indicate that both positions and intensities of 3d–3d electronic transitions are strongly dependent on the coordination environment around the copper(II) complex. The results indicate that the nature of the electron‐acceptor atoms in the equatorial ligands plays an important role in the number of solvent molecules in the first solvation shell of copper(II) acac systems. © 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

IR absorption spectra of some aminoalcohols in the gas phase

The IR spectra of aminoalcohols in the gas phase show that in practically all instances (with the exception of N-allylaminoethanol) they are present mainly as monomers, with or without intramolecular H-bonds (IHB), the former predominating in the vicinal compounds. In 1,4-aminoalcohols the concentrations of molecules with and without IHB are practically equalized. The strongest IHB occur in the seven-membered intramolecular rings which are formed in 4-aminobutan-1-o1, for which the greatest difference is observed between the frequencies of the free OH groups and those bound in IHB. Analysis of the effect of an increase in temperature on the intensities of the OH bands of the free OH groups and of those bound in IHB shows that the partial rupture of the IHB occurs to a greater extent in the unsubstituted aminoalcohols of the vicinal series than in aminoalcohols with two alkyl substituents on the amino group. The IHB exhibit less tendency to break with rise in temperature in the vicinal aminoalcohols than in the 1,3- and 1,4-aminoalcohols.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 6, pp. 1323–1333, June, 1990.     

Ultrafast luminescence in Ir(ppy)3

A femtosecond luminescence and transient absorption study of fac-tris(2-phenylpyridine) iridium(III) [Ir(ppy)₃] is reported. An emission with a lifetime component of 230 fs in the spectral region 500–560 nm is assigned to the population equilibration between electronic substates of the lowest excited triplet state, with energy dissipation by intramolecular vibrational redistribution. At shorter wavelengths a strong emission with a faster decay was observed and is attributed to a state with a higher admixture of singlet character. A slower decay on a 3 ps time scale is attributed to vibrational cooling. The results contribute to an understanding of the photophysics of transition metal complexes.     

Theoretical study on the reaction of SiH(CH(3))(3) with SiH(3) radical

The multiple-channel reactions SiH(3) + SiH(CH(3))(3) --> products are investigated by direct dynamics method. The minimum energy path (MEP) is calculated at the MP2/6-31+G(d,p) level, and energetic information is further refined by the MC-QCISD (single-point) method. The rate constants for individual reaction channels are calculated by the improved canonical variational transition state theory with small-curvature tunneling correction over the temperature range of 200-2400 K. The theoretical three-parameter expression k(T) = 2.44 x 10(-23)T(3.94) exp(-4309.55/T) cm(3)/(molecule s) is given. Our calculations indicate that hydrogen abstraction channel R1 from SiH group is the major channel because of the smaller barrier height among five channels considered.