Endo- and aminopeptidase activities of rat cathepsin H.

Employing soluble denatured protein substrates and their derivatives, the proteolytic activity of rat cathepsin H was investigated. The enzyme showed aminopeptidase activity which sequentially released amino acid from the N-terminal of the substrate. The aminopeptidase activity did not act on N alpha-acetylated peptides and showed moderate ionic-strength dependence when methionyl-methylcoumarylamide was employed as a substrate. These results indicate that the activity essentially requires an N-terminal free amino group of the substrate and recognizes it electrostatically to some extent. On the other hand, the enzyme was also indicated to exhibit endopeptidase activity by employing appropriate N alpha-acetylated peptide substrates. In contrast to the aminopeptidase activity, the endopeptidase activity showed rather strict specificity, preferring hydrophobic residues at P2 and P3 sites. Because of the broad specificity and high efficiency of the aminopeptidase activity, it was difficult to directly observe endopeptidase activity in the digestion of large peptide substrates with a free alpha-amino terminal. Thus, this is the first experimental evidence that indicates endopeptidase activity by assigning internal peptide bonds cleaved by this activity. From this data, we proposed a model of the binding site of this enzyme.     

Interpretation of the measurement results near the detection limit in gamma-ray spectrometry using Bayesian statistics

The requirement that the true value of an activity cannot be negative is used for the transformation of raw observed values, which can be positive or negative, into the expected activity values. The probability distribution of the activity values is a truncated Gaussian distribution, and the expected value and the variance of the activity values are derived from the observed value and its standard deviation. It has been shown that the standard deviation of the activity values is smaller than the standard deviation of the observed value and that the ratio of the standard deviation of the activity values and the expected value is less than unity. Since the expected activity value is larger than the original observed value, and the standard deviation of the activity values is smaller than the standard deviation of the observed value, the additional information, that the activity cannot be negative, leads to an improvement in the result. However, since the expected activity value depends on the standard deviation of the observed value, conservatively assessed standard deviation lead to a bias of the expected activity values.     

Water Activity Dependence of Lipases in Non-aqueous Biocatalysis

Eleven lipases are tested and it was found that lipases can be divided into three types according to water activity dependence. The first type is lipase that has low water activity dependence and works in a low water activity, its performance changes little with the change of water activity. The optimum water activity is 0.19 and Newlase F (Rhizopus niveus), lipase FAP-15 (Rhizopus oryzae) belong to this type. The second type is lipase that has medium water activity dependence and its performance changes with the change of water activity. Most lipases belong to this type and the optimum water activity in this type is about 0.60. The third type is lipase that has a high water activity dependence and works only in a high water activity (a _w  > 0.75). WGL (wheat germ) belongs to this type and the optimum water activity is 0.90. The relationship between enantioselectivity and water activity is also discussed and the enantioselectivity seems to be independent of water activity. And we also compared the two control methods of water activity, it was found that the method which add solid salt hydrates to the reaction mixture (method II) is more stable and effective throughout the reaction than the method that pre-equilibrate via the vapor phase (method I). The addition concentration of salt hydrates is also investigated and the optimum concentration is 1 g/l.     

The Synthesis and Herbicidal Evaluation of Fluorine-Containing Phenoxyacetoxyalkylphosphonate Derivatives

To investigate the influence of a fluorine moiety on the biological activity of phenoxyacetoxyalkylphosphonates, a series of fluorine-containing phenoxyacetoxyalkylphosphonates were synthesized and screened for herbicidal activity in a greenhouse. The majority of the title compounds showed better preemergence activity than postemergence activity against the test plants, especially on monocotyledon. Compound 5l exhibited notable activity. Results showed that by introducing a fluorine moiety to the parent structure of phenoxyacetoxyalkylphosphonates, a series of new compounds with satisfactory herbicidal activity could be synthesized. A reasonable combination of a fluorine moiety and other substituents on the benzene ring had a great influence on the herbicidal activity.     

Activation and stabilization of enzymes entrapped into reversed micelles

Observations of the activity of two hydrolyzing enzymes—protease and α-amylase—entrapped inside the reversed micelles formed by surfactants in hexane, benzene, and cyclohexane are reported. The surfactants chosen for this study are: Tween 80, a nonionic surfactant, Cetyl pyridinium chloride, a cationic surfactant, and two anionic surfactants, sodium lauryl sulfate and Aerosol OT. Tween 80 enhances the activity of both protease and α-amylase. Sodium lauryl sulfate and Aerosol OT, which are ionic surfactants, enhance the activity of protease, but inhibit the activity of α-amylase. Cetyl pyridinium chloride, however, enhances the activity of α-amylase, but inhibits the activity of protease. Enhanced activity is generally severalfold greater in comparison to the activity observed in the usual aqueous system in the absence of reversed micelles. It has also been observed that the enhanced activity of the enzymes entrapped inside the reversed micelles remains preserved for a much longer period of time in comparison to the activity in the usual aqueous systems. These observations, which support the view that with proper choice of surfactant and the organic solvent, reversed micelles act like a microreactor that provides a favorable aqueous microenvironment for enzyme activity, have biotechnological overtones.     

新型5-脂肪基-1,2,4-三唑曼尼希碱的合成及生物活性

设计并合成了22个具有长脂肪链取代的新型三唑曼尼希碱,研究了其植物生长调节活性、除草活性和对细胞周期分裂蛋白25B(CDC25B)抑制活性,结果发现,多数目标分子表现出优良的促进细胞生长素活性和除草活性,表明该类分子有望成为优良的新型农药;对CDC25B抑制活性筛选发现一种曼尼希碱具有优良的CDC25B抑制活性,其IC₅₀值低于阳性参照物正钒酸钠,有望成为肿瘤治疗的药物先导物。     

不同活性焦载体对V2O5/AC催化剂脱硫活性的影响

活性焦载体的选择是制备高活性烟气脱硫催化剂的关键.以四种煤制活性焦(AC)为载体,制得了系列V2O5/AC催化剂.通过脱硫活性评价、催化氧化能力测试和孔结构分析表明,AC表面的高活性氧化位较少,担载V2O5使AC表面产生了新的高活性氧化位,其脱硫活性显著提高;V2O5在具有高比表面积和较大孔容的载体上分散性较好,能够形...     

From activity cliffs to activity ridges: informative data structures for SAR analysis

The extraction of SAR information from structurally diverse compound data sets is a challenging task. One of the focal points of systematic SAR analysis is the search for activity cliffs, that is, structurally similar compounds having large potency differences, from which SAR determinants can be deduced. The assessment of SAR information is usually based on pairwise similarity and potency comparisons of data set compounds. As a consequence, activity cliffs are mostly evaluated at a compound pair level. Here, we present an extension of the activity cliff concept by introducing "activity ridges" that are formed by overlapping "combinatorial" activity cliffs between participating compounds, giving rise to ridge-like structures in activity landscapes. Activity ridges are rich in SAR information. In a systematic analysis of 242 compound data sets, we have identified well-defined activity ridges in 71 different sets. In addition, an information-theoretic approach has been devised to characterize the structural composition of activity ridges. Taken together, our results show that activity ridges frequently occur in sets of active compounds and that different categories of ridges can be distinguished on the basis of their structural content. The computational identification of activity ridges provides access to compound subsets having high priority for SAR analysis.     

Design of multitarget activity landscapes that capture hierarchical activity cliff distributions

An activity landscape model of a compound data set can be rationalized as a graphical representation that integrates molecular similarity and potency relationships. Activity landscape representations of different design are utilized to aid in the analysis of structure-activity relationships and the selection of informative compounds. Activity landscape models reported thus far focus on a single target (i.e., a single biological activity) or at most two targets, giving rise to selectivity landscapes. For compounds active against more than two targets, landscapes representing multitarget activities are difficult to conceptualize and have not yet been reported. Herein, we present a first activity landscape design that integrates compound potency relationships across multiple targets in a formally consistent manner. These multitarget activity landscapes are based on a general activity cliff classification scheme and are visualized in graph representations, where activity cliffs are represented as edges. Furthermore, the contributions of individual compounds to structure-activity relationship discontinuity across multiple targets are monitored. The methodology has been applied to derive multitarget activity landscapes for compound data sets active against different target families. The resulting landscapes identify single-, dual-, and triple-target activity cliffs and reveal the presence of hierarchical cliff distributions. From these multitarget activity landscapes, compounds forming complex activity cliffs can be readily selected.     

Reasons for the high stability of fumarase activity ofBrevibacterium flavum cells immobilized with k-carrageenan gel

Whole cells ofBrevibacterium flavum having high fumarase activity were immobilized using K-carrageenan. The reason for the high stability of fumarase activity of immobilized cells was investigated. One of main reasons for stabilizing fumarase activity by immobilization using K-carrageenan against organic solvents such as ethanol and acetone was the lower concentration of these solvents in the carrageenan gel compared with that in outer bulk solution. The stabilization of fumarase activity in the immobilized cells against protein-denaturing reagents was found to be related to rheological properties of K-carrageenan gel. Another reason for stabilizing fumarase activity by immobilization with K-carrageenan was to protect the cells from lysis. When immobilized cells were freeze-thawed, their fumarase activity increased and operation stability decreased. Therefore, one reason for the high decay of fumarase activity caused by the freeze-thawing may be a change in the pore size of the K-carrageenan gel. Fumarase activity and the operational stability of immobilized cells was found to depend on gelling conditions. Therefore, the steric structure of the K-carrageenan gel may be related to the decay of fumarase activity.     

Regulation of coenzyme a transferase and acetoacetate decarboxylase activities in clostridium acetobutylicum

The activity of two enzymes involved in acetone production in Clostridium acetobutylicum, acetoacetate decarboxylase and coenzyme A transferase, was studied under acidogenic or solventogenic conditions. Acetoacetate decarboxylase activity was low under acidogenic conditions and after pyruvate addition. Under the same conditions, coenzyme A transferase activity was high. A mutant which lacked acetoacetate decarboxylase activity but was positive for coenzyme A transferase activity was isolated.     

Transferase and hydrolase activities of phospholipase D from the roots ofAconitum arcuatum

The phospholipase D fromAconitum arcuatum has been studied. The optimum pH values have been determined: 6.3 for the hydrolase activity and 8.0 for the transferase activity. Calcium ions activate the phospholipase D: the hydrolase activity most strongly at 8 and 30 µmole and the transferase activity at 30 µmole. The hydrolase activity of the phospholipase D is not activated by low concentrations of sodium dodecyl sulfate, while the transferase activity is activated to a considerable degree. The results obtained are compared with those on the activation of cabbage phospholipase D.     

pH对增强生物除磷系统酶活性的影响

通过比较不同pH值下增强生物除磷系统中关键酶活性的变化规律, 研究了酶活性与聚磷菌污泥产率系数及可溶性正磷酸盐(SOP)的关系. 结果表明, 在pH=6.4-7.6范围内, 脱氢酶、腺苷酸激酶和聚磷酸盐激酶的活性随着pH的增加而线性增加, 酸性磷酸酶和碱性磷酸酶的活性不受pH的影响. 聚磷菌的产率系数与脱氢酶活性、厌氧释磷速率与腺苷酸激酶活性、好氧吸磷速率与聚磷酸盐激酶活性分别呈线性关系. 表明较高的pH有利于聚磷菌的生长和提高聚磷菌的活性, 从而提高了除磷效率.     

Analysis of Influential Factors of Konjac Glucomannan（KGM） Molecular Structure on Its Activity

Biological activity of konjac glucomannan is closely related to its structure,in particular to its high-level structure.Researches on the activity mechanism of konjac glucomannan are significant for revealing the mysteries of participation in life activity.In this paper,analysis of the effects of konjac glucomannan configuration and various factors on its structure and activity was conducted,mechanism of biological activity of konjac glucomannan was explored,and the hot research topic of konjac glucomannan was given.     

Enzyme activity electrophoresis: development and applications

The development of rocket enzyme activity electrophoresis for the detection and quantification of various proteinases, lipases and pectinases is presented. Rocket enzyme activity electrophoresis is more sensitive than the radial diffusion assay and often enables distinction between qualitatively different enzymes present in the same samples, whereas the radial diffusion assay only provides information on the overall enzyme activity. However, calibration and optimization of the enzyme activity electrophoretic assay have to be performed for each new enzyme-substrate system to be analyzed. Some of the common pitfalls in the development of new enzyme activity electrophoretic assays are presented. Enzyme activity electrophoresis can be applied in combination with other electrophoretic assays. Particularly the combination of enzyme activity electrophoresis with various immunoelectrophoretic methods can provide detailed information on the enzymes studies.     

Antibacterial activity of long-chain fatty alcohols against Staphylococcus aureus

The antibacterial activity against Staphylococcus aureus of long-chain fatty alcohols was investigated, with a focus on normal alcohols. The antibacterial activity varied with the length of the aliphatic carbon chain and not with the water/octanol partition coefficient. 1-Nonanol, 1-decanol and 1-undecanol had bactericidal activity and membrane-damaging activity. 1-Dodecanol and 1-tridecanol had the highest antibacterial activity among the long-chain fatty alcohols tested, but had no membrane-damaging activity. Consequently, it appears that not only the antibacterial activity but also the mode of action of long-chain fatty alcohols might be determined by the length of the aliphatic carbon chain.     

298.15K下果糖水溶液中卤化钠单个离子活度系数

利用离子选择性电极和甘汞电极分别测定了NaX+果糖+水体系中的单个离子活度系数和离子平均活度系数.结果表明:基于Debye-Hückel扩展方程和Pitzer方程求得的单个离子活度系数彼此一致;由单个离子加合求得的与直接测定的平均离子活度系数也很一致;随果糖含量的增大,单个离子活度系数减小;在相同混合溶剂(果糖+水)和相等电解质浓度条件下,对于不同的NaX,Na+的活度系数大小顺序为NaFNaClNaBr.基于离子间的相互作用对结果进行了讨论.     

Comment on “Factorizing of a concentration function for the mean activity coefficients of aqueous strong electrolytes into individual functions for the ionic species” by A. Ferse and H.O. Müller

A. Ferse and H.O. Müller have recently presented a mathematical method aimed at subdividing the activity coefficients of electrolytes into functions of individual ionic species; these functions are suggested to be the ionic activity coefficients. By examining the method, it is possible to verify that the peculiar mathematical structure of the functions in question really guarantees a unique result, unlike the usual subdivisions of electrolyte activity coefficients, which admit infinite possibilities for the ionic activity coefficients. But the subsequent step of the reasoning, i.e., that these functions have to be the activity coefficients of the ionic species, is an illation. And indeed, another kind of subdivision in individual functions can be exemplified, whose mathematical structure also guarantees results that are unique and perfectly compatible with all theoretical properties of the ionic activity coefficients. It is concluded that it is impossible to rely on mathematical method to pull the activity coefficients of ions out of the mean activity coefficients of the electrolytes. And hence, the individual functions for the ionic species determined by Ferse and Müller do not represent the ionic activity coefficients and do not have any particular utility.     

Synthesis and Biological Activities of Methyl 1-(5-Methyl Isoxazol-3-oxy Acetoxy) Alkyl Methyl Phosphinates

Methyl 1-(5-methyl isoxazol-3-oxy acetoxy) alkyl methyl phosphinates were synthesized by the condensation of O-methyl methyl 1-hydroxyalkyl phosphinates moiety with 5-methyl isoxazol-3-oxy acetyl chloride and were tested for plant growth regulatory activity and herbicidal activity. Some compounds exhibited notable plant regulatory activity and herbicidal activity.     

TBP在水相中活度系数的探讨

本文对TBP-C6H6、TBP-CCl4、TBP-CHCl3及TBP-C6H5Cl四体系作了蒸汽压法测量.对TBP-C6H5Cl体系作了^3^2P标记法测量,其它三体系^3^2P标记法数据取自文献.分析了二种测量的结果.所得的稀释剂的活度系数应该基本一致.