An ab initio Molecular Orbital Study of the Conformational Properties of all-( Z )-Cyclododeca-1,4,7,10-tetraene

 Ab initio HF/6-31G^* and MP2/6-31G^*//HF/6-31G^* methods were used to calculate the structure optimization and conformational interconversion pathways for all-(Z )-cyclododeca-1,4,7,10-tetraene. This compound adopts the symmetrical crown (C _4v) conformation. Ring inversion takes place via symmetrical intermediates, such as boat-chair (BC, C _s) and twist (C _2h) conformers and requires about 22.3 kJ · mol⁻¹. The calculated strain energies for BC and twist conformers are 5.9 and 13.5 kJ · mol⁻¹. The results of semiempirical AM1 calculations for structural parameters and relative energies of the important geometries of the title compound are in good agreement with the results of ab initio methods.     

High-Pressure 17O-NMR. Study of Vanadium (II) in Water: A Second Example of an Associative Interchange Mechanism (Ia) for Solvent Exchange on an Octahedral Divalent Transition-Metal Ion

The water exchange of [V(H₂O)₆]Cl₂ in aqueous solution has been studied as a function of temperature and pressure (up to 250 MPa), by measuring the ¹⁷O-FT-NMR. line-widths of the free water resonance at 8.13 MHz. The kinetic parameters obtained are K = 87±4 s^?1, ΔH^* = +61.8 ± 0.7 kJ mo1^?1 and ΔS^* = ?0.4±1.9 J mol^?1 K^?1. A pressure-independent volume of activation ΔV^* = ?4.1±0.1 cm³ mol^?1 is obtained, suggesting an associative interchange (I^a) mechanism for this early divalent metal ion.     

Surface segregation measurements of In and S impurities from a dilute Cu(In,S) ternary alloy

The surface segregation of In and S from a dilute Cu(In,S) ternary alloy were measured using Auger electron spectroscopy coupled with a linear programmed heater. The alloy was linearly heated and cooled at constant rates. Segregation data of a linear heat run showed surface segregation of In that reached a maximum surface coverage of 25% followed by S, which reached a coverage of 30%. It was found that after In had reached a maximum surface coverage, it started to desegregate as soon as the S enriched the surface until In was completely replaced by S. The segregation parameters, namely, the pre‐exponential factor (D₀), activation energy (Q), segregation energy (ΔG?) and interaction energy (Ω) were extracted from the measured segregation data for both In and S segregation in Cu by simulating the measured segregation data with a theoretical segregation model (modified Darken model). The segregation parameters obtained for In segregation in Cu are D₀ = 1.8 ± 0.5 × 10^?5 m² s^?1, Q = 184.3 ± 1.0 kJ.mol^?1, ΔG? = ?61.4 ± 1.4 kJ.mol^‐1, Ω_Cu?In = 3.0 ± 0.4 kJ.mol^?1; for S segregation in Cu the parameters are D₀ = 8.9 ± 0.5 × 10^?3 m² s^?1, Q = 212.8 ± 3.0 kJ.mol^?1, ΔG? = ?120.0 ± 3.5 kJ.mol^?1, Ω_Cu?S = 23.0 ± 2.0 kJ mol^?1 and the In and S interaction parameter is Ω_In?S = ?4.0 ± 0.5 kJ.mol^?1. The initial parameters used for the Darken calculations were extracted from fits performed with the Fick's and Guttmann model. Copyright © 2013 John Wiley & Sons, Ltd.     

An ab initio Molecular Orbital Study of the Conformational Properties of all-(Z)-Cyclododeca-1,4,7,10-tetraene

Summary.  Ab initio HF/6-31G^* and MP2/6-31G^*//HF/6-31G^* methods were used to calculate the structure optimization and conformational interconversion pathways for all-(Z )-cyclododeca-1,4,7,10-tetraene. This compound adopts the symmetrical crown (C _4v) conformation. Ring inversion takes place via symmetrical intermediates, such as boat-chair (BC, C _s) and twist (C _2h) conformers and requires about 22.3 kJ · mol⁻¹. The calculated strain energies for BC and twist conformers are 5.9 and 13.5 kJ · mol⁻¹. The results of semiempirical AM1 calculations for structural parameters and relative energies of the important geometries of the title compound are in good agreement with the results of ab initio methods. Received July 9, 2001. Accepted September 26, 2001     

Sequential segregation of Sn and Sb in a Cu(111) single crystal

The sequential segregation of Sn and Sb to the surface of a Cu(111) single crystal was measured in the temperature range 400–1100 K by Auger electron spectroscopy. It was found that Sn with the higher diffusion coefficient first segregates to the surface and then is replaced by the slower‐segregating Sb. The results were fitted by a ternary segregation model yielding segregation energies (ΔG_Sn = 76.3 kJ mol^?1, ΔG_Sb = 95.9 kJ mol^?1), interaction parameters (Ω_SnCu = 3.8 kJ mol^?1, Ω_SbCu = 16.2 kJ mol^?1, Ω_SnSb = ?5.3 kJ mol^?1) and diffusion coefficients (D_0(Sn) = 1.8 × 10^?5 m² s^?1, E_Sn = 173 kJ mol^?1, D_0(Sb) = 6.0 × 10^?5 m² s^?1, E_Sb = 205 kJ mol^?1) for both species. The validity of the interaction coefficients and segregation energies was verified using the Guttman equations for equilibrium segregation in ternary systems. Copyright © 2003 John Wiley & Sons, Ltd.     

Enthalpy of formation and bond energies on unsaturated oxygenated hydrocarbons using G3MP2B3 calculation methods

Enthalpies of unsaturated oxygenated hydrocarbons and radicals corresponding to the loss of hydrogen atoms from the parent molecules are intermediates and decomposition products in the oxidation and combustion of aromatic and polyaromatic species. Enthalpies (Δ_fH⁰₂₉₈) are calculated for a set of 27 oxygenated and nonoxygenated, unsaturated hydrocarbons and 12 radicals at the G3MP2B3 level of theory and with the commonly used B3LYP/6‐311g(d,p) density functional theory (DFT) method. Standard enthalpies of formation (Δ_fH⁰₂₉₈) are determined from the calculated enthalpy of reaction (ΔH⁰_rxn,298) using isodesmic work reactions with reference species that have accurately known Δ_fH⁰₂₉₈ values. The deviation between G3MP2B3 and B3LYP methods is under ±0.5 kcal mol^?1 for 9 species, 18 other species differs by less than ±1 kcal mol^?1 , and 11 species differ by about 1.5 kcal mol^?1. Under them are 11 radicals derived from the above‐oxygenated hydrocarbons that show good agreement between G3MP2B3 and B3LYP methods. G3 calculations have been performed to further validate enthalpy values, where a discrepancy of more than 2.5 kcal mol^?1 exists between the G3MP3B3 and density functional results. Surprisingly the G3 calculations support the density functional calculations in these several nonagreement cases. © 2005 Wiley Periodicals, Inc. Int J Chem Kinet 37: 633–648, 2005     

A robust computational investigation on C60 fullerene nanostructure as a novel sensor to detect SCN−

This study explored on the adsorption properties and electronic structure of SCN^? via density functional theory analysis on the exterior surfaces of C₆₀ and CNTs using B3LYP functional and 6-31G** standard basis set. Then adsorption of SCN^? through nitrogen atom on the C₆₀ fullerene is electrostatic (?48.02 kJ mol^?1) in comparison with the C₅₉Al fullerene that shows covalently attached to fullerene surface (?389.10 kJ mol^?1). Our calculations demonstrate that the SCN^? adsorption on the pristine and Al-doped single-walled CNTs are ?173.13 and ?334.43 kJ mol^?1, indicating that the SCN^? can be chemically bonded on the surface of Al-doped CNTs. Moreover, the adsorption of SCN^? on the C₆₀ surface is weaker in comparison with C₅₉B, C₅₉Al, and C₅₉Ga systems but its electronic sensitivity improved in comparison with those of C₅₉B, C₅₉Al, and C₅₉Ga fullerenes. The evaluation of adsorption energy, energy gap, and dipole moment demonstrates that the pure fullerene can be exploited in the design practice as an SCN^? sensor and C₅₉Al can be used for SCN^? removal applications.     

Preparation and characterization of nitrogen-rich bis-1-methylimidazole1H,1′H-5,5′-bistetrazole-1,1′-diolate energetic salt

A new nitrogen-rich energetic salt of bis-1-methylimidazole 1H,1′H-5,5′-bistetrazole-1,1′-diolate salt, (1-M)₂BTO, was synthesized and characterized (FT-IR, ¹H NMR, ¹³C NMR, elemental analysis, and X-ray single-crystal diffraction). Results indicated that (1-M)₂BTO crystallizes in the triclinic space group P-1. The thermal decomposition behavior of (1-M)₂BTO was determined by differential scanning calorimetry (DSC) and thermogravimetric tandem infrared spectroscopy. The decomposition peak temperature of (1-M)₂BTO was 530 K, which suggested that the salt is strong heat resistance. The apparent activation energies were 130.56 kJ mol^?1 (Kissinger’s method) and 132.50 kJ mol^?1 (Ozawa’s method), respectively. The enthalpy of formation for the salt was calculated as 917.3 kJ mol^?1. The detonation velocity and detonation pressure of (1-M)₂BTO were 7448 m s^?1 and 20.7 GPa, respectively, using the Kamlet-Jacobs equation. Furthermore, the sensitivity test results showed that its impact sensitivity is greater than 50 J and friction sensitivity is 180 N, indicating that it has a lower sensitivity.

     

High-Pressure Stopped-Flow Study of the Kinetics of Base Hydrolysis of the Dichromate Ion by Hydroxide Ion,Ammonia, Water,and 2,6-Lutidine in Aqueous Solution

Volumes of activation for the base hydrolysis of the dichromate anion have been measured at 298.2 K, using high-pressure stopped-flow spectrophotometry. The values of ΔV* (cm³ · mol^?1), ? 17.9 ± 0.6, ? 19.2 ± 0.9, ? 24.9 ± 0.9 and ? 26.0 ± 0.7 for OH^?, NH₃, H₂O and 2,6-lutidine, respectively, are consistent with an interchange mechanism with associative activation mode (I^a).     

Die Bildungsenthalpie 1,6-überbrückter [10] Annulene

The enthalpies of formation of 1.6-methano-[10] annulene (IV) (ΔHf₂₉₈ (IV, g) = 75.2 ± 0.6 kcal mol^?1), 1.6-imino-[10] annulene (V) (ΔHf₂₉₈(V, g) = 87.8 ± 0.7 kcal mol^?1) and of 1.6-oxido-[10] annulene (VI) (ΔHf₂₉₈(VI, g) = 47.8 ± 1.2 kcal mol^?1) have been determined by combustion calorimetry. The difficulties connected with an attempt to derive meaningfull «resonance energies» are discussed.     

Structure of the 2-isopropylaminoethanol isolated molecule: Conformational analysis and intramolecular interactions

In this paper, a systematic exploration of all the possible conformers of 2-isopropylaminoethanol (2-IPAE) was carried out using the Density Functional Theory (B3LYP) and the 6-311++G(d,p) basis set. At this level, 66 unique conformers within a Gibbs energy range of ca. 31 kJ mol⁻¹ were found in the potential energy surface and their geometrical and thermodynamic properties were determined and discussed. A significant molecular strain was evidenced by the dihedrals and distances between non-bonded hydrogen atoms. According to the geometrical parameters, a O–H···N hydrogen bond was found to be present in the three most stable conformers, representing 68% of the conformational composition at 298.15 K. The energetic and geometrical data derived from the DFT calculations were further complemented by a NBO analysis of the most stable conformers.     

Hierarchically porous tobacco midrib-based biochar prepared by a simple dual-templating approach for highly efficient Rhodamine B removal

High volatile matter contents in the feedstock could promote the development of porous structures and the reactivity of biochar. Herein, tobacco midrib with high volatile matter contents was used to prepare biochar by a dual-templating approach with mild activators (K₂C₂O₄·H₂O, CaCO₃). The characterizations of textural properties indicated that tobacco midrib-based biochar possessed numerous meso-, micro-, and macro-pores, specific surface area reached 1841.9 m² g^?1. As a dye adsorbent, the adsorption capacity of this biochar towards Rhodamine B reached 588.7 mg g^?1. After recycling 5 times, it still retained over 90% of its initial adsorption capacity. Moreover, thermodynamic parameters assessed with full vańt Hoff equation confirmed that dye molecules replace water molecules connected on biochar surface during the adsorption according to negative heat capacity change (-3.9 kJ mol^?1 K^?1), ΔH⁰ (–22.1 kJ mol^?1) and ΔS⁰ (0.3 kJ mol^?1) revealed that the adsorption process of Rh B by TMB was exothermic and the disorder of the solid–liquid interface increased. Overall, this research provides a mild and effective approach to modifying biochar from special tissue of agriculture waste and an insight into the process of dye adsorption on biochar from thermodynamics.     

An examination of the vaporization enthalpies and vapor pressures of pyrazine, pyrimidine, pyridazine, and 1,3,5-triazine

The vaporization enthalpies and liquid vapor pressures from T = 298.15 K to T = 400 K of 1,3,5-triazine, pyrazine, pyrimidine, and pyridazine using pyridines and pyrazines as standards have been measured by correlation-gas chromatography. The vaporization enthalpies of 1,3,5-triazine (38.8 ± 1.9 kJ mol⁻¹) and pyrazine (40.5 ± 1.7 kJ mol⁻¹) obtained by these correlations are in good agreement with current literature values. The value obtained for pyrimidine (41.0 ± 1.9 kJ mol⁻¹) can be compared with a literature value of 50.0 kJ mol⁻¹. Combined with the condensed phase enthalpy of formation in the literature, this results in a gas-phase enthalpy of formation, Δ_f H _m (g, 298.15 K), of 187.6 ± 2.2 kJ mol⁻¹ for pyrimidine, compared to a value of 195.1 ± 2.1 calculated for pyrazine. Vapor pressures also obtained by correlation are used to predict boiling temperatures (BT). Good agreement with experimental BT (±4.2 K) including results for pyrimidine is observed for most compounds with the exception of the pyridazines. The results suggest that compounds containing one or two nitrogen atoms in the ring are suitable standards for correlating various heterocyclic compounds provided the nitrogen atoms are isolated from each other by carbon. Pyridazines do not appear to be evaluated correctly using pyridines and pyrazines as standards.     

Stabilization of HHeF by Complexation: Is it a Really Viable Strategy?

Ab initio calculations at the MP2 and CCSD(T) levels of theory have disclosed the conceivable existence of fluorine‐coordinated complexes of HHeF with alkali‐metal ions and molecules M⁺ (M⁺=Li⁺–Cs⁺), M⁺–OH₂, M⁺–NH₃ (M⁺=Li⁺, Na⁺), and MX (M=Li, Na; X=F, Cl, Br). All these ligands L induce a shortening of the H? He distance and a lengthening of the He? F distance accompanied by consistent blue‐ and redshifts, respectively, of the H? He and He? F stretching modes. These structural effects are qualitatively similar to those predicted for other investigated complexes of the noble gas hydrides HNgY, but are quantitatively more pronounced. For example, the blueshifts of the H? He stretching mode are exceptionally large, ranging between around 750 and 1000 cm^?1. The interactions of HHeF with the ligands investigated herein also enhance the (HHe)⁺F^? dipole character and produce large complexation energies of around 20–60 kcal mol^?1. Most of the HHeF–L complexes are indeed so stable that the three‐body dissociation of HHeF into H+He+F, exothermic by around 25–30 kcal mol^?1, becomes endothermic. This effect is, however, accompanied by a strong decrease in the H? He? F bending barrier. The complexation energies, ΔE, and the bending barriers, E*, are, in particular, related by the inverse relationship E*(kcal mol^?1)=6.9exp[?0.041ΔE(kcal mol^?1)]. Therefore the HHeF? L complexes, which are definitely stable with respect to H+He+F+L (ΔE≈25–30 kcal mol^?1), are predicted to have bending barriers of only 0.5–2 kcal mol^?1. Overall, our calculations cast doubt on the conceivable stabilization of HHeF by complexation.     

Conformational analysis of 2-halocyclopentanones by NMR and IR spectroscopies and theoretical calculations

The conformational isomerism of 2-chlorocyclopentanone and 2-bromocyclopentanone has been determined through the solvent dependence of the ¹H NMR ³J_HH coupling constants, theoretical calculations and infrared data, using the solvation theory for the treatment of NMR data. In 2-chlorocyclopentanone, the energy difference (E_Ψ-e − E_Ψ-a), in the isolated molecule at B3LYP level of theory, between the pseudo-equatorial (Ψ-e) and pseudo-axial (Ψ-a) conformers is 0.42 kcal mol⁻¹, which decreases in CCl₄ and in acetonitrile solutions, in good agreement with infrared data (ν_CO), despite the uncertainties of the latter method. The conformational equilibrium for 2-bromocyclopentanone is also between the Ψ-e and Ψ-a conformations, with an energy difference (E_Ψ-e − E_Ψ-a), in the isolated molecule at B3LYP level of theory, is 0.85 kcal mol⁻¹ which decreases in CCl₄ and in acetonitrile solutions, also in good agreement with infrared data.     

Kinetic study of crystallization of PHB in presence of hydroxy acids

Poly(3-hydroxybutyrate), PHB, has been structurally modified through reaction with hydroxy acids (HA) such as tartaric acid (TA) and malic acid (MA). The crystallization kinetic of the samples was evaluated by isoconversional method through nonlinear fitting to obtain the estimation for activation energy (E _a ) and pre-exponential (A) values. The thermal behavior of the crystallization temperature, 44.8 and 58.9 °C at 5 °C/min, and results obtained to the average activation energy, 73 ± 9 kJ mol⁻¹ and 63 ± 1 kJ mol⁻¹, to PHB/MA and PHB, respectively, are suggesting that malic acid may be deriving plasticizer units from its own PHB chain. PHB/TA show increase in the medium value of E _a, 119 ± 2 kJ mol⁻¹ and T _c = 48.2 °C (at 5 °C/min), indicating that tartaric acid is probably interacts in different way to the of PHB chain (E _a=73 ± 9 kJ mol⁻¹, T _c = 44.8 °C at 5 °C/min).     

Intramolecular homolytic substitution of seleninates – a computational study

Ab initio and density functional theory (DFT) calculations predict that intramolecular homolytic substitution by alkyl radicals at the selenium atom in seleninates proceeds through smooth transition states in which the attacking and leaving radicals adopt a near collinear arrangement. When forming a five-membered ring and the leaving radical is methyl, G3(MP2)-RAD calculations predict that this reaction proceeds with an activation energy (ΔE₁³) of 30.4 kJ mol^?1. ROBHandHLYP/6-311++G(d,p) calculations suggest that the formation of five-membered rings through similar intramolecular homolytic substitution by aryl radicals, with expulsion of phenyl radicals, proceeds with the involvement of a hypervalent intermediate. This intermediate further dissociates to the observed products, with overall energy barriers of about 40 kJ mol^?1. Homolytic addition to the phenyl group was found not to be competitive with substitution, with a calculated barrier of 57.6 kJ mol^?1. This computational study provides insight into homolytic substitution chemistry involving seleninates.     

Dynamic proton magnetic resonance studies on complex spin systems. Non-mutual three-spin exchange in N-(trideuteriomethyl)-2-cyanoaziridine

At room temperature and below, the proton NMR spectrum of N-(trideuteriomethyl)-2-cyanoaziridine consists of two superimposed ABC patterns assignable to two N-invertomers; a single time-averaged ABC pattern is observed at 158.9°C. The static parameters extracted from the spectra in the temperature range from –40.3 to 23.2°C and from the high-temperature spectrum permit the calculation of the thermodynamic quantities ΔH⁰ = ?475±20 cal mol^?1 (?1.987 ± 0.084 kJ mol^?1) and ΔS⁰ = 0.43±0.08 cal mol^?1 K^?1 (1.80±0.33 J mol^?1 K^?1) for the cis ? trans equilibrium. Bandshape analysis of the spectra broadened by non-mutual three-spin exchange in the temperature range from 39.4–137.8°C yields the activation parameters ΔH_tc^≠ = 17.52±0.18 kcal mol^?1 (73.30±0.75 kJ mol^?1), ΔS_tc^≠ = ?2.08±0.50 cal mol^?1 K^?1 (?8.70±2.09 J mol^?1 K^?1) and ΔG_tc^≠ (300 K) = 18.14±0.03 kcal mol^?1 (75.90±0.13 kJ mol^?1) for the trans → cis isomerization. An attempt is made to rationalize the observed entropy data in terms of the principles of statistical thermodynamics.     

Analysis of B3LYP and MP2 conformational population distributions in trans‐nicotine,acetylcholine, and ABT‐594

This work presents an analysis of the equivalence of MP2 and DFT (B3LYP functional) conformational populations. As a test case, we select three cholinergic agents (trans‐nicotine, acetylcholine, and the nicotinic analgesic ABT‐594), where the minima on the conformational energy hypersurfaces expand a large range of energies (～0–30 kJ mol^?1). From energetic and structural data obtained in vacuo at the MP2 and B3LYP/cc‐pVDZ levels, we build conformational partition functions, including the effect of the conformational kinetic energy and the rotovibrational coupling. Our results at a physiological temperature (37°C) show qualitative agreement in all cases. Quantitative agreement, however, is only found for trans‐nicotine and ABT‐594. In the first case, energy minima differ by <0.2 kJ mol^?1. Therefore, the equivalence of structural results translates in the equivalence of the conformational distribution. For ABT‐594, the minima are separated by as much as 8.0 kJ mol^?1, and the conformational energy determines the conformational distribution. In this case, the slight relative variation of conformational energy, between B3LYP and MP2, does not affect the population, since the secondary minima are high in energy and very low in population. © 2005 Wiley Periodicals, Inc. Int J Quantum Chem, 2005     

Kinetic and mechanistic studies on the substitution of aqua ligands from <Emphasis Type="Italic">cis</Emphasis>-diaqua-<Emphasis Type="Italic">bis</Emphasis>-(bypyridyl)-ruthenium(II) ion by vic-dioximes

Kinetics of aqua ligand substitution from cis-[Ru(bpy)₂(H₂O)₂]²⁺ by three vicinal dioximes, namely dimethylglyoxime (L¹H), 1,2-cyclohexane dionedioxime (L²H) and α-furil dioxime (L³H) have been studied spectrophotometrically in the 45–60 °C temperature range. The rate constants increase with increasing dioxime concentration and approach a limiting condition. We propose the following rate law for the reaction in the 3.5–5.5 pH range: where k ₂ is the interchange rate constant from outer sphere to inner sphere complex and K _E is the outer sphere association equilibrium constant. Activation parameters were calculated from the Eyring plots for all three systems: ΔH ^≠ = 59.2 ± 8.8, 63.1 ± 6.8 and 69.7 ± 8.5 kJ mol⁻¹, ΔS ^≠ = −122 ± 27, −117 ± 21 and −99 ± 26 J K⁻¹ mol⁻¹ for L¹H, L²H and L³H, respectively. An associative interchange mechanism is proposed for the substitution process. Thermodynamic parameters calculated from the temperature dependence of the outer sphere association equilibrium constants give negative ΔG ⁰ values for all the systems studied at all the temperatures (ΔH ⁰ = 30.05 ± 2.5, 18.9 ± 1.1 and 11.8 ± 0.2 kJ mol⁻¹; ΔS ⁰ = 123 ± 8, 94 ± 3 and 74 ± 1 J K⁻¹ mol⁻¹ for L¹H, L²H and L³H, respectively), which also support our proposition.