Photochemical isomerisation studies of rubifolide and bipinnatin J. Unravelling some of the biosynthesis interrelationships between macrocyclic and polycyclic cembranoids found in corals

Irradiation of natural rubifolide (1) and bipinnatin J (2) for short periods of time using a 400 W sunlamp results in photochemical Z- to E-isomerisations to their corresponding E-isomers 10 and 16, respectively, neither of which has yet been discovered in Nature. Prolonged irradiation of rubifolide (1) produces the ring-contracted compound kallolide B (11a), and photooxidation of E-rubifolide (10) leads to epilophodione (12); both 11a and 12 are found in corals. The photoisomerisation studies provide an insight into the most likely origins of more complex cembranoids, for example, 4, 5, 18 and 19 from the archetypal cembranoids 1, 2, and 3 in vivo. The studies also suggest a likely route to the unusually rearranged cembranoid sarcofuranocembrenolide B (23) via a cascade of photo-initiated radical cyclisations and rearrangements from the biradical intermediate 24 produced from cembranoid 22.     

Relationship between the average molecular polarizabilities of polycyclic aromatic hydrocarbons and their retention indices determined on various stationary phases

The Kováts retention indices of 10 polycyclic aromatic hydrocarbons were determined on SE-30, OV-101, SE-52, OV-7 and OV-17 stationary phases. A significant correlation has been found between the retention indices and the average molecular polarizabilities of the analyzed substances. Equations were derived for the direct determination of the average molecular polarizabilities from the retention index values. The influence of the temperature on this relationship is also indicated.     

Correlation between flat-band potential position and oxygenated termination nature on boron-doped diamond electrodes

This paper deals with a study about the position of the flat-band potential and the surface chemistry of boron-doped diamond electrodes. Successive and mild anodic treatments have been performed on as-deposited electrodes, in H₂SO₄. From Mott–Schottky plots, flat-band potential (V_FB) evolution has been monitored, exhibiting successively negative then positive shifts during surface oxidation, depending on the anodic coulometric charge. Thanks to surface characterization by X-ray Photoelectron Spectroscopy (XPS), this particular evolution of V_FB has been related to the evolution of specific oxygen functionalities at the surface. While the general trends in the literature is to associate the V_FB displacement with the generation of oxygenated terminations, the results presented in this study exhibit the high sensitivity of V_FB to hydroxyl or ether groups.     

X-ray structural studies on a series of oxygenated anthracene cycloadducts. Evidence for pi-sigma negative homohyperconjugation in the ground state

Application of the variable oxygen probe to low-temperature crystal data from the series of oxygenated anthracene cycloadducts 10-16, revealed a strong response of the C-OR bond distance in these structures to the electron demand of the OR group. It is believed that this represents the manifestation of pi-sigma negative homohyperconjugation in the ground state. Ab initio molecular orbital calculations on the model system 18 provided further support for this.     

Notable structural property of 2,4,6-tri-tert-butylanilide enolates: interconversion between the rotamers and their reactivity

Interconversion between the separable 2,4,6-tri-tert-butylanilide rotamers was found to easily occur through formation of the lithium enolate. Protonation of the anilide enolate gave the anilide rotamer mixture of E-major. On the other hand, reactions of lithium enolate prepared from 2,4,6-tri-tert-butylpropionanilide with alkyl bromides preferentially afforded a Z-rotamer of alkylated products.     

Influence of resonance on the acidity of sulfides, sulfoxides, sulfones, and their group 16 congeners

The influence of resonance on the acidities of dimethyl sulfide (DMS), dimethyl sulfoxide (DMSO), and dimethyl sulfone (DMSO2) and their group 16 congeners (DMXO(n) for X = Se, Te, Po and n = 0-2) is examined using ab initio methods and the natural bond orbital (NBO) and natural resonance theory (NRT) analyses. Gas-phase acidities are evaluated using B3LYP-optimized geometries with coupled cluster energies and complete basis set extrapolation. The acidity of the DMSO(n) molecules increases with increasing coordination of the central S atom. Acidity also tends to increase when the central atom is substituted by a heavier group 16 atom. NRT analysis reveals significant resonance delocalization in the DMXO(n) molecules and their anions. On deprotonation, the DMXO(n) molecules undergo structural changes that are consistent with changes in the resonance character of the calculated charge densities. However, resonance cannot account for the trends in the deprotonation energies. Whereas the DMX- anions are more strongly resonance stabilized than their parent molecules DMX, the DMXO2(-) anions and DMXO2 molecules are nearly equally resonance stabilized. Thus, there appears to be no extra stabilization of DMXO2(-) compared to that of DMX- that would account for the enhanced acidity of DMXO2 relative to DMX.     

Development of a sequential supercritical fluid extraction method for the analysis of nitrated and oxygenated derivatives of polycyclic aromatic hydrocarbons in urban aerosols

A two-step supercritical fluid extraction (SFE) method has been developed for the analysis of oxygenated and nitrated polycyclic aromatic hydrocarbons (oxy- and nitro-PAHs, respectively) present in urban aerosol samples. The proposed SFE procedure first involves an extraction step using pure CO2 in order to remove the less polar compounds from the matrix and a second consecutive step using toluene-modified CO2. The oxy- and nitro-PAHs are obtained in the second step. Parameters affecting both collection efficiencies and the selective extraction of oxy- and nitro-PAHs in the second SFE step were optimised. Analysis of the extracts was performed using gas chromatography with electron-capture detection and coupled to mass spectrometry. The proposed SFE method was compared with a conventional extraction technique such as sonication and good agreement in the results was obtained. Nevertheless, clean up of sonication extracts was needed, whereas no purification was necessary for SFE extracts. The SFE method was applied to the analysis of oxy- and nitro-PAHs in urban aerosol samples and 9-fluorenone, 9,10-anthraquinone, 2-methyl-9,10-anthraquinone, benzanthrone, benz[a]anthracene-7,12-dione and 1-nitropyrene were identified at concentrations ranging between 15 and 364 pg m(-3).     

Identification of oxygenated polycyclic aromatic hydrocarbons in diesel particulate matter by capillary gas chromatography and capillary gas chromatography/mass spectrometry

Summary Using a two-step liquid chromatographic separation on normalphase cartridges, crude extracts of diesel particulate matter can be separated without time-consuming sample handling into special fractions which mainly contain slightly-polar oxygenated polycyclic aromatic hydrocarbons (oxy-PAH) and nitrated polycyclic aromatic hydrocarbons (nitro-PAH). Subsequent analysis was by fused-silica capillary gas chromatography on a SE54 column along with flame-ionisation (GC/FID) and positive-ion electron-impact mass spectrometric detection (GC/MS) respectively. A number of individual oxy-PAH belonging to four different chemical classes (ketones, quinones, anhydrides and aldehydes) and several individual nitro-PAH were characterized by their retention times and mass spectra. Presented at the 15th International Symposium on Chromatography, Nürnberg, October 1984     

Determination of selected oxygenated polycyclic aromatic hydrocarbons (oxy-PAHs) in diesel and air particulate matter standard reference materials (SRMs)

Oxygenated polycyclic aromatic hydrocarbons (oxy-PAHs) have recently received much attention in discussions regarding the negative impacts of particulate matter (PM) on human health and the environment. The National Institute of Standards and Technology provides several environmental matrix standard reference materials (SRMs) with certified and reference values for polycyclic aromatic hydrocarbons (PAHs) and nitrated PAHs. In this study, the concentrations of oxygenated PAHs are determined in three air PM SRMs (1649b, 1648a, and 2786) and three diesel PM SRMs (1650b, 2975, and 1975) using two independent gas chromatography–mass spectrometry methods. Concentrations of oxy-PAHs were at the milligrams per kilogram level with higher overall concentrations in diesel PM (up to 50 mg/kg for 9,10-anthraquinone). One of the highest oxy-PAH concentrations (up to 5 mg/kg) measured in the air particulate SRMs was for 7,12-benz[a]anthracenquinone. These results suggest that oxygenated PAHs should not be neglected in the analysis of PM as their concentrations can be as high as those of some PAHs and are one to two orders of magnitude higher than those for nitro-PAHs.     

Determination of nitrated polycyclic aromatic hydrocarbons and their precursors in biotic matrices

Analytical method for the determination of ultra-trace levels of nitro-PAHs in various biotic matrices has been developed. Soxhlet extraction and/or solvent extraction enhanced by sonication were used for isolation of target analytes; GPC followed by SPE were employed for purification of crude extracts. GC-MS/NCI technique was utilised for identification/quantitation of target analytes. Performance characteristics of implemented method were obtained through thorough in-house validation procedure. The main sources of uncertainties were critically evaluated, possible strategies of their elimination/minimisation were considered and consequently employed. Examination of real-life samples of various foodstuffs (complete human diet, mate tea, pumpkin seed oil, parsley, sausages) was performed in this study.     

A comprehensive investigation of the interrelationships between spectroscopy and photochemistry and substituents of some azulenic derivatives

Several azulenic dyes, including six azulene hydrocarbons, two azulene aldehydes, and two olefinic azulenes, have been synthesized to survey their photophysics and photochemistry. These azulenes display S(2)-->S(0) emission, but with several differences. This is the most remarkable characteristic of the effect of orbital control on color and excited state properties of the azulenic compounds. This paper emphasizes how emission spectra and photochemistry of azulenic compounds are influenced by their chemical structure and solvent. The emission spectra of the azulene hydrocarbons suggest that their excited state properties can be controlled by their molecular structure and size. It was confirmed by emission and (1)H NMR spectroscopy that azulene monoaldehyde is protonated in a strong acid, such as trifluoroacetic acid (TFA). Photochemistry of styrylazulenes was observed during irradiation. Azulenic compounds are thermally stable and color tunable, and hence they are good candidates as non-linear optical materials. Based on their unique photochemical and photophysical characteristics, novel azulenic dyes can be constructed for different uses.     

Speciation and biosynthetic variation in four dictyoceratid sponges and their cyanobacterial symbiont, Oscillatoria spongeliae

Four species of marine sponges (Phylum Porifera, Order Dictyoceratida), which contain the filamentous cyanobacterial symbiont Oscillatoria spongeliae, were collected from four locations in Palau. The halogenated natural products associated with the symbiont were characterized from each sample, revealing that each species contained either chlorinated peptides, brominated diphenyl ethers, or no halogenated compounds. Analysis of the host sponges and the symbionts indicated that each species of sponge contained a distinct strain of morphologically similar cyanobacteria. Although cospeciation may be present in this group, we have identified that at least one host switching event has occurred in this symbiosis. Only the strain of O. spongeliae in the sponge containing the chlorinated compounds possessed genes involved in the biosynthesis of chlorinated leucine precursors, indicating that the chemical variation observed in these animals has a genetic foundation.     

Putting the 'N' in ACENE: pyrazinacenes and their structural relatives

Acenes have emerged as an important class of organic electronic material. Related heteroatom-substituted compounds, or heteroacenes, introduce an important means for modulating properties and improving materials' stability. In this perspective, we will review the historical origins of the heteroacenes and discuss recent progress in the field of acene and related compounds containing fused 1,4-diazabenzene units, i.e. pyrazine, also known as the 'pyrazinacenes'. We focus not only on the types of materials that have been prepared but also on their chemical and physical properties, including synthetic procedures, electronic properties, self-assembly characteristics, and we also introduce some of the computational studies aimed at understanding the more unusual behaviours of this group of compounds, such as protic tautomerism and aromaticity/antiaromaticity.     

A structural examination of the impact of oxygenated side chains in Ephedra compounds in the catalytic asymmetric addition of diethylzinc to aldehydes

An investigation of the impact of oxygenated side chains in Ephedra compounds on the catalytic asymmetric addition of diethylzinc to aldehydes has been conducted. (1R,2S)-Ephedrine and (1S,2S)-pseudoephedrine were alkylated with either alkyl halides or β-alkoxyalkyl halides to afford a series of ligands 9a–h and 10a–h. These compounds were employed in the enantioselective addition of diethylzinc to a variety of aldehydes. It was determined that the presence of oxygen could have a negative effect in terms of obtaining high levels of enantiomeric discrimination, but the effect is diminished with higher levels of substitution near the oxygen.     

Relations between thermodynamic,physical and structural properties of alkali halides at their melting points

Linear relations of the general form Λ = a + mτ have been presented to describe the connection between the characteristic energetic and geometric parameters of alkali halides at their respective melting points. Inference has been made that these presented relations may be associated with the structure of the alkali halide liquids.