A Fourier-transform ion-cyclotron-resonance study of the reactions of polycyclic aromatic hydrocarbon cations with molecules of interstellar interest

The reactivity of naphthalene and pyrene radical cations and their derivatives (C₁₀H_n⁺, n=6,7,8,9), C₁₆H_n (n=9,10,11) has been studied with molecules of interstellar interest in an ion cyclotron resonance apparatus. The radical cations C₁₀H₈⁺ and C₁₆H₁₀⁺ are unreactive with H₂,CO,H₂O and NH₃. Adduct formation is the only channel for almost all reactions of C₁₀H₇⁺ with these molecules. The implications of these results for the stability of polycyclic aromatic hydrocarbon (PAH) cations in the interstellar medium are briefly discussed. Exploratory studies of the ion chemistry of a larger PAH, coronene, have also been done.     

Laboratory spectra of cold gas phase polycyclic aromatic hydrocarbon cations, and their possible relation to the diffuse interstellar bands

A novel laboratory technique is described, combining the use of supersonic expansion, laser excitation and small aromatic-rare gas van der Waals (vdW) clusters properties, which was developed to access the electronic absorption spectra of the polycyclic aromatic hydrocarbon (PAH) cations in the visible. It consists in preparing vdW complexes of the PAH molecule with a rare gas in a molecular beam, to photoionize it by resonant selective two-photon ionization, then to photodissociate this ionic complex by means of a delayed laser pulse in a time-of-flight mass spectrometer. The method is illustrated by presenting the visible spectra of the Naphthalene, Phenanthrene, Fluorene and Phenylacetylene cations. Such spectra can be unambiguously compared to the astronomical spectra of reddened stars, which exhibit the so-called diffuse interstellar bands (DIBs) in absorption. An interesting feature of the technique is its ability to measure the absolute absorption cross-sections. The large values of the oscillator strengths of the transitions, which are derived, are discussed in the astrophysical context which consists in considering that the PAH cations could be carriers for some of the DIBs.     

Reactions of polycyclic aromatic hydrocarbon radical cations with model biological nucleophiles

The determination of gas-phase reactivity of a series of polycyclic aromatic hydrocarbons (PAHs) with nucleophiles is directed at achieving isomer differentiation through ion-molecule reactions and collisionally activated decomposition spectra. A series of PAH isomers form gas-phase [adduci — H]⁺ ions with the reagent nucleophiles pyridine and N-methylimidazole. Collisionally activated decomposition spectra of the [adduct — H]⁺ ions of the pyridine/PAH systems are dominated by products formed by losses of C₅H₄N, C₅H₅N (presumably neutral pyridine), and C₅H₆N. Collisional activation of PAH/N-methylimidazole [adduct — H]⁺ ions causes analogous losses of C₄H₅N₂, C₄H₆N₂ (presumably neutral N-methylimidazole), and C₄H₇N₂. The relative abundances of the ions that result from these losses are highly isomer specific for N-methylimidazole but less so for pyridine. Furthermore, PAH/N-methylimidazole [adduct — H]⁺ ions undergo a series of metastableion decompositions that also provide highly isomer-specific information. The C₄H₇N₂ (from PAH/N-methylimidazole product ions) and C₅H₆N (from PAH/pyridine product ions) losses tend to increase with the ΔH _f of the PAH radical cation. In addition, it is shown that the fragmentation patterns of these gas-phase PAH/nucleophile adducts are similar to fragmentation patterns of PAH/nucleoside adducts generated in solution, which suggests that the structures of products formed in gas-phase reactions are similar to those produced in solution.     

A new yardstick for benzenoid polycyclic aromatic hydrocarbons

The newly introduced signature of benzenoids (a sequence of six real numbers Si with i = 6-1) shows the composition of the pi-electron partition by indicating the number of times all rings of the benzenoid are assigned 6, 5, 4, 3, 2, or 1 pi-electrons. It allows the introduction of a new ordering criterion for such polycyclic aromatic hydrocarbons by summing some of the terms in the signature. There is an almost perfect linear correlation between sums S6 + S5 and S4 + S3 for isomeric cata- or peri-fused benzenoids, so that one can sort such isomers according to ascending s 6 + S5 or to descending S4 + S3 sums (the resulting ordering does not differ much and agrees with that based on increasing numbers of Clar sextets and of Kekule structures). Branched cata-condensed benzenoids have higher S6 + S5 sums than isomeric nonbranched systems. For nonisomeric peri-condensed benzenoids, both sums increase with increasing numbers of benzenoid rings and decrease with the number of internal carbon atoms. Other partial sums that have been explored are S6 + S5 + S3 And S6 + S2 + S1, and the last one appears to be more generally applicable as a parameter for the complexity of benzenoids and for ordering isomeric benzenoids.     

Electronic spectra and ionization potentials of a stable class of closed shell polycyclic aromatic hydrocarbon cations

Due to their stability, closed shell polycyclic aromatic hydrocarbon (PAH) cations are possible candidates as carriers for some of the diffuse interstellar bands (DIBs). The electronic absorption spectra and ionization potentials of several closed shell PAH cations are determined in this study. We use density functional theory (DFT) at the BLYP/6-31G* level to determine the ionization potentials and thus confirm the stability of the PAH cations of interest. We use time-dependent density functional theory (TDDFT), again at the BLYP/6-31G* level, to calculate the vertical excitation energies and oscillator strengths of the PAH cations. We observe dominant single absorptions within the DIB spectral region of interest in all of the PAH cation spectra except for the smallest member of the series.     

Modeling formation of molecules in the interstellar medium by radical reactions with polycyclic aromatic hydrocarbons

Adsorptions of CH°₂, CH°₃, NH°₂, and OH° radicals and molecule formation on a partially hydrogenated surface of a polycyclic aromatic hydrocarbon (PAH) (C₂₄H₂₇⁺) were modeled. It was found that radical adsorptions are feasible with important modifications of surface bond strengths and bond distances. Adsorbed hydrogen may diffuse due to adsorbate‐surface interactions. Formations of CH₄, NH₃, H₂O, CH₃NH₂, and CH₃OH were studied by Eley‐Rideal (ER) and Langmuir‐Hishelwood (LH) mechanisms. Potential energetic surfaces were performed for both mechanisms and the ER presents lower reaction energy barriers than the LH one, in all cases. Parametric quantum program (CATIVIC) was employed and comparisons with DFT results were performed. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem 110:2560–2572, 2010     

Synthesis of a three-dimensional spiro-annulated polycyclic aromatic hydrocarbon

We describe the results of our investigation on the preparation, structural characterization, and optical properties of a spiro-annulated polycyclic aromatic hydrocarbon prepared by the cyclodehydrogenation of a hexa{2-(9,9′-spirobifluorenyl)}benzene precursor molecule. Single-crystal X-ray diffraction analysis reveals that the anthracene backbone adopts one of the largest end-to-end twists thus far reported.     

Carcinogenicity of polycyclic aromatic hydrocarbons: A dialogue

A discussion between a biochemist and a theoretical chemist reviews the insights that quantum chemistry brings to polycyclic aromatic hydrocarbon carcinogenicity. Limitations as well as successes of the theory are described. The importance of communication between theorists and experimentalists in this complicated field is emphasized.     

Suppressing aggregation in a large polycyclic aromatic hydrocarbon

With the approach presented herein, a large aromatic pi-system is synthesized, which shows extraordinarily high solubility and an effective suppression of aggregation. This was due to a distortion of the aromatic core by bulky tert-butyl groups and the solubilizing effects of alkyl chains in the corona of the aromatic core. Therefore not only the processing and cleaning of the materials with standard laboratory techniques became possible, but moreover the first structure-rich UV/vis and a resolved (1)H NMR spectra for an aromatic system two times larger than hexa-peri-hexabenzocoronene were recorded. The bulk properties in an extruded fiber as well as on the surface showed a columnar self-assembly including a phase in which a homeotropic alignment on a substrate was observed, which turns the material into an interesting candidate for future applications in electronic devices.     

Analysis of nitrated polycyclic aromatic hydrocarbons

Many nitrated polycyclic aromatic hydrocarbons (NPAH) that are present in low concentrations in the environment and in emission sources have been shown to be mutagenic and/or carcinogenic. This paper reviews the current methods of analysis of these compounds with the emphasis on NPAH measurements in ambient particulate matter samples.     

Ion-molecule reactions of dimethyl ether cations with polycyclic aromatic hydrocarbons in a quadrupole ion trap mass spectrometer

The reaction chemistry between dimethyl ether (DME) cations and polycyclic aromatic hydrocarbons (PAHs) was elucidated by isolating three different types of DME ions using a quadrupole ion trap and reacting them individually with neutral PAH molecules eluting from a gas chromatographic column. The results obtained show that the CH(2)OCH(3)(+) ion (m/z 45) reacts via adduct formation followed by elimination of CH(3)OH, the (CH(3))(2)OH(+) (m/z 47) ion serves as proton donor and the (CH(3))(3)O(+) ion (m/z 61) does not yield any reaction products. Copyright 1999 John Wiley & Sons, Ltd.     

Palladium-catalyzed pentannulation of polycyclic aromatic hydrocarbons

We present a new and versatile one-step synthesis of a series of small molecular chromophores based on cyclopentannulated polycyclic aromatic hydrocarbons (PAH). Easily available pyrene, anthracene, and perylene bromides serve as starting materials for the reactions. The formation of the five-membered ring is achieved by the straightforward palladium(0)-catalyzed carbannulation with various substituted acetylenes. This approach is applicable either to single or multiple annulation procedures leading to hitherto inaccessible PAH topologies. According to the resulting products of the diverse reactions, a mechanistic explanation is proposed. UV/Vis absorption as well as cyclovoltammetric measurements were performed for characterization demonstrating the value of this annulation technique. Optical absorptions of up to 780 nm and absorption coefficients ranging from 8000 to 34,000 M(-1) cm(-1) were detected.     

Simplified determination of polycyclic aromatic hydrocarbons

Accurate quantitative analysis for selected polycyclic aromatic hydrocarbons present on urban dust can be obtained by using a simple procedure consisting of sonic-probe extraction with cyclohexane; clean-up with Florisil((R))-XAD-4((R)), and measurement by high-resolution gas chromatography with flame-ionization detection (HRGC/FID). The analysis can be further simplified by eliminating the clean-up step if HRGC/electron-impact mass-spectrometry (MS) is available. Both the FID and MS methods give results consistent with those obtained by standard procedures. The direct HRGC/MS procedure, combined with chemical ionization, can also be applied to the determination of polycyclic organic materials present in solvent-refined coal, shale oil and crude oil.     

Infrared spectroscopy of polycyclic aromatic hydrocarbon cations. 1. Matrix-isolated naphthalene and perdeuterated naphthalene

Ionized polycyclic aromatic hydrocarbons (PAHs) are thought to constitute an important component of the interstellar medium. Despite this fact, the infrared spectroscopic properties of ionized PAHs are almost unknown. The results we present here derive from our ongoing spectroscopic study of matrix isolated PAH ions and include the spectra of the naphthalene cation, C10H8+, and its fully deuterated analog, C10D8+, between 4000 and 200 cm-1. Ions are generated in situ Lyman-alpha photoionization of the neutral precursor. Bands of the C10H8+ ion are observed at 1525.7, 1518.8, 1400.9, 1218.0, 1216.9, 1214.9, 1023.2, and 758.7 cm-1. Positions and relative intensities of these bands agree well with those in the available literature. The 758.7 cm-1 band has not previously been reported. C10D8+ ion bands appear at 1466.2, 1463.8, 1379.4, 1373.8, 1077.3, 1075.4, and 1063.1 cm-1. Compared to the analogous modes in the neutral molecule, the intensities of the cation's CC modes are enhanced by an order of magnitude, while CH modes are depressed by this same factor. Integrated absorption intensities are calculated for the strongest bands of C10H8 and for the observed bands of C10H8+. Absolute intensities derived for the naphthalene cation differ from earlier experimental results by a factor of approximately 50, and from theoretical predictions by a factor of approximately 300. Reasons for these discrepancies and from the astronomical implications of PAH cation spectra are discussed.     

Determination of polycyclic aromatic hydrocarbons in marine sediments using a new ASE-SFE extraction technique

In order to determine PAHs in marine sediment samples by GC/MS(SIM) a new extraction approach of ASE-SFE was evaluated using combined accelerated solvent extraction (ASE, dynamic and static mode) and supercritical fluid extraction (SFE, dynamic mode) without further purification of the sample. The solvents used for ASE-SFE were methylene chloride and carbon dioxide. The recovery data, precision and accuracy of the whole method were evaluated statistically. The average recoveries of PAHs, based on deuterated internal standards were 77% for 2–3-ring PAHs, 85% for 4-ring PAHs, 88% for ¶5-ring PAHs and 97% for 6-ring PAHs. The extraction time required for the ASE-SFE technique was 30 min, which is longer than in the case of independent use of ASE and shorter compared to SFE. ASE-SFE recoveries of PAHs from SRM marine sediment are comparable for (2–3-ring, 4-ring PAHs) or higher (5-ring, 6-ring PAHs) than reported for the conventional extraction methods of ASE and SFE. Method detection limits of (MDL) were statistically estimated. MDL values obtained for 15 PAHs compounds vary between 0.06 ngg^?1 and 3.54 ngg^?1.     

Enthalpies of formation of polycyclic aromatic hydrocarbons

Comparison of the experimental enthalpies of formation of 77 polycyclic aromatic hydrocarbons with those calculated by semiempirical quantum-chemical methods showed that the AM1 approximation ensures the best agreement between the experimental and calculated values. The enthalpies of formation of 60 compounds of this series were calculated using the AM1 method and the corresponding linear regression equation.     

Determination of polycyclic aromatic hydrocarbons in marine sediments using a new ASE-SFE extraction technique

In order to determine PAHs in marine sediment samples by GC/MS(SIM) a new extraction approach of ASE-SFE was evaluated using combined accelerated solvent extraction (ASE, dynamic and static mode) and supercritical fluid extraction (SFE, dynamic mode) without further purification of the sample. The solvents used for ASE-SFE were methylene chloride and carbon dioxide. The recovery data, precision and accuracy of the whole method were evaluated statistically. The average recoveries of PAHs, based on deuterated internal standards were 77% for 2-3-ring PAHs, 85% for 4-ring PAHs, 88% for 5-ring PAHs and 97% for 6-ring PAHs. The extraction time required for the ASE-SFE technique was 30 min, which is longer than in the case of independent use of ASE and shorter compared to SFE. ASE-SFE recoveries of PAHs from SRM marine sediment are comparable for (2-3-ring, 4-ring PAHs) or higher (5-ring, 6-ring PAHs) than reported for the conventional extraction methods of ASE and SFE. Method detection limits of (MDL) were statistically estimated. MDL values obtained for 15 PAHs compounds vary between 0.06 ngg(-1) and 3.54 ngg(-1).