首页 | 本学科首页   官方微博 | 高级检索  
相似文献
 共查询到20条相似文献,搜索用时 15 毫秒
1.
The hairpin structure is one of the most common secondary structures in RNA and holds a central position in the stream of RNA folding from a non‐structured RNA to structurally complex and functional ribonucleoproteins. Since the RNA secondary structure is strongly correlated to the function and can be modulated by the binding of small molecules, we have investigated the modulation of RNA folding by a ligand‐assisted formation of loop–loop complexes of two RNA hairpin loops. With a ligand (NCT6), designed based on the ligand binding to the G–G mismatches in double‐stranded DNA, we successfully demonstrated the formation of both inter‐ and intra‐molecular NCT6‐assisted complex of two RNA hairpin loops. NCT6 selectively bound to the two hairpin loops containing (CGG)3 in the loop region. Native polyacrylamide gel electrophoresis analysis of two doubly‐labeled RNA hairpin loops clearly showed the formation of intermolecular NCT6‐assisted loop–loop complex. Förster resonance energy‐transfer studies of RNA constructs containing two hairpin loops, in which each hairpin was labeled with Alexa488 and Cy3 fluorophores, showed the conformational change of the RNA constructs upon binding of NCT6. These experimental data showed that NCT6 simultaneously bound to two hairpin RNAs at the loop region, and can induce the conformational change of the RNA molecule. These data strongly support that NCT6 functions as molecular glue for two hairpin RNAs.  相似文献   

2.
Three coordination compounds with dimensions from 0D to 2D, namely, [Co(bppdca)2(HL1)2] ( 1 ) [Co(bppdca)(L2)(H2O)] · 2H2O ( 2 ) and [Co(bppdca)(L3)] · 3H2O ( 3 ) [bppdca = N,N′‐bis(pyridine‐3‐yl)pyridine‐2,6‐dicarboxamide, H2L1 = 2,5‐pyridinedicarboxylic acid, H2L2 = 4,4′‐oxybisbenzoic acid, H2L3 = 2‐carboxymethylsulfanyl nicotinic acid] were hydrothermally synthesized and structurally characterized. Single crystal X‐ray diffraction analysis reveals that complex 1 is a discrete 0D complex, in which the bppdca ligand and the H2L1 act as the terminal groups to coordinate with the CoII ions. In coordination polymer 2 , two bppdca ligands coordinate in anti configuration with two CoII ions to generate a 28‐membered Co2(bppdca)2 loop, which is further extended into 1D ladder‐like double chain by pairs of L2 ligands. In 3 , the CoII ions are linked by bppdca ligands to generate 1D wave‐like chain, which is further connected by the L3 to form a 2D network. Finally, the coordination compounds 1 – 3 are extended into 3D supramolecular frameworks through the hydrogen bonding interactions. The CoII ions and the bppdca ligands in the title coordination compounds exhibit different coordination characters and conformations. The effect of organic dicarboxylates with different rigidity and length on the structures of CoII coordination compounds was investigated. In addition, the fluorescence and electrochemical behaviors of coordination compounds 1 – 3 were reported.  相似文献   

3.
Three coordination polymers, [Cd2(pvba)2(tbdc)(dmf)2] ( 1 ), [Co2(pvba)2(tbdc)(dmf)2(H2O)2] ( 2 ), and [Ni2(pvba)2(tbdc)(dmf)2(H2O)2] ( 3 ) (H2tbdc=2,3,5,6‐tetrabromobenzenedicarboxylic acid, Hpvba=trans‐2‐(4′‐pyridyl)vinylbenzoic acid), were synthesized by solvothermal methods. The solid‐state structures of compounds 1 and 2 were determined by X‐ray crystallography. In compounds 1 and 2 , the bimetallic cores acted as secondary building units that connected the tbdc ligands in one direction and a pair of pvba ligands, which were aligned in a head‐to‐tail parallel manner, in the orthogonal direction to form sheet structures. The C?C bonds in these pvba ligand pairs in all three compounds were well‐aligned to undergo quantitative [2+2] cycloaddition reactions in the solid state under UV irradiation, thereby yielding their cyclobutane derivatives. This photochemical reaction appeared to facilitate structural transformations from one 2D structure into another in the solid state. The photoreactive CoII‐ and NiII coordination polymers exhibited a reversible dehydration–rehydration reaction that was accompanied by color changes from pink to purple and green to yellow, respectively, owing to a change in coordination number from six to five. Magnetic studies showed that compound 2 was an antiferromagnet, which displayed a field‐dependent transition with a critical field (Hc) of 40 kOe at 2 K; the antiferromagnetic interaction between the Co2 units was strengthened and weakened by dehydration and UV irradiation, respectively. The cyclobutane ligand in the photodimerized products was cleaved on heating to yield a mixture of trans‐ and cis‐isomers of pvba, as monitored by 1H NMR spectroscopy. The CdII coordination polymer underwent quantitative cleavage of the cyclobutane ring whilst the other two underwent partial cleavage.  相似文献   

4.
Two new CoII coordination polymers [Co4(tbip)4(bipy)4(H2O)4] ( 1 ) and [Co(tbip)(phen)(H2O)] · H2O ( 2 ) (H2tbip = 5‐tert‐butyl isophthalic acid, bipy = 2,2′‐bipyridine, phen = 1,10‐phenanthroline) have been synthesized under hydrothermal conditions and characterized by elemental analysis, IR spectroscopy, and single‐crystal X‐ray diffraction. Compound 1 is a tbip‐bridged tetranuclear cobalt(II) complex, which is further linked by hydrogen bonds to form a supramolecular network. Compound 2 shows a tbip‐bridged linear chain structure, which is extended by hydrogen bonds to generate a double chain. Magnetic measurements show that there are weak ferromagnetic interactions between the adjacent CoII ions in 1 .  相似文献   

5.
The mechanism of oxidation of ternary complexes, [CoII(nta)(S)(H2O)2]3? and [CoII(nta)(M)(H2O)]3? (nta = nitrilotriacetate acid, S = succinate dianion, and M = malonate dianion), by periodate in aqueous medium has been studied spectrophotometrically over the (20.0–40.0) ± 0.1°C range. The reaction is first order with respect to both [IO4?] and the complex, and the rate decreases over the [H+] range (2.69–56.20) × 10?6 mol dm?3 in both cases. The experimental rate law is consistent with a mechanism in which both the hydroxy complexes [CoII(nta)(S)(H2O)(OH)]4? and [CoII(nta)(M)(OH)]4? are significantly more reactive than their conjugate acids. The value of the intramolecular electron transfer rate constant for the oxidation of the [CoII(nta)(S)(H2O)2]3?, k1 (3.60 × 10?3 s?1), is greater than the value of k6 (1.54 × 10?3 s?1) for the oxidation of [CoII(nta)(M)(H2O)]3? at 30.0 ± 0.1°C and I = 0.20 mol dm?3. The thermodynamic activation parameters have been calculated. It is assumed that electron transfer takes place via an inner‐sphere mechanism. © 2008 Wiley Periodicals, Inc. Int J Chem Kinet 40: 103–113, 2008  相似文献   

6.
Three new μ4‐bridged CoII5 clusters with similar core motifs have been synthesised with the use of Ntert‐butyldiethanolamine (tbdeaH2) and pivalic acid (piv): [CoII54‐N3)(tbdea)2(μ‐piv)4(piv)(CH3CN)2]?CH3CN ( 1 ), [CoII54‐Cl)(Cl)(tbdea)2(μ‐piv)4(pivH)2] ( 2 ) and [CoII54‐N3)(Cl)(tbdea)2(μ‐piv)4(pivH)2] ( 3 ). Magnetic measurements were performed for all three compounds. It was found that while the chloride‐bridged cluster 2 does not show an out‐of‐phase signal, which excludes single‐molecule magnet (SMM) behaviour, the azide‐bridged compounds 1 and 3 show out‐of‐phase signals as well as frequency dependence of the ac susceptibility, as expected for SMMs. We confirmed that 1 is a SMM with zero‐field quantum tunnelling of the magnetisation at 1.8 K. Compound 3 is likely a SMM with a blocking temperature well below 1.8 K. We established a physical model to fit the χT versus T and M versus B curves of the three compounds to reproduce the observed SMM trend. The analysis showed that small changes in the ligand shell modify not only the magnitude of exchange constants, but also affect the J and g matrices in a non‐trivial way.  相似文献   

7.
In the title compound, {[Co2(C14H8O4)2(C10H8N2)2(H2O)2]·2C14H10O4}n, each CoII ion is six‐coordinate in a slightly distorted octahedral geometry. Both CoII ions are located on twofold axes. One is surrounded by two O atoms from two biphenyl‐2,2′‐dicarboxylate (dpa) dianions, two N atoms from two 4,4′‐bipyridine (bpy) ligands and two water molecules, while the second is surrounded by four O atoms from two dpa dianions and two N atoms from two bpy ligands. The coordinated dpa dianion functions as a κ3‐bridge between the two CoII ions. One carboxylate group of a dpa dianion bridges two adjacent CoII ions, and one O atom of the other carboxylate group also chelates to a CoII ion. The CoII ions are bridged by dpa dianions and bpy ligands to form a chiral sheet. There are several strong intermolecular hydrogen bonds between the H2dpa solvent molecule and the chiral sheet, which result in a sandwich structure.  相似文献   

8.
Some bacterial heme proteins catalyze the coupling of two NO molecules to generate N2O. We previously reported that a heme Fe–NO model engages in this N?N bond‐forming reaction with NO. We now demonstrate that (OEP)CoII(NO) similarly reacts with 1 equiv of NO in the presence of the Lewis acids BX3 (X=F, C6F5) to generate N2O. DFT calculations support retention of the CoII oxidation state for the experimentally observed adduct (OEP)CoII(NO?BF3), the presumed hyponitrite intermediate (P.+)CoII(ONNO?BF3), and the porphyrin π‐radical cation by‐product of this reaction, and that the π‐radical cation formation likely occurs at the hyponitrite stage. In contrast, the Fe analogue undergoes a ferrous‐to‐ferric oxidation state conversion during this reaction. Our work shows that cobalt hemes are chemically competent to engage in the NO‐to‐N2O conversion reaction.  相似文献   

9.
An attempt has been made to design double‐stranded ladder‐like coordination polymers (CPs) of hemidirected PbII. Four CPs, [Pb(μ‐bpe)(O2C‐C6H5)2] ? 2H2O ( 1 ), [Pb2(μ‐bpe)2(μ‐O2C‐C6H5)2(O2C‐C6H5)2] ( 2 ), [Pb2(μ‐bpe)2(μ‐O2C‐p‐Tol)2(O2C‐p‐Tol)2] ? 1.5 H2O ( 3 ) and [Pb2(μ‐bpe)2(μ‐O2C‐m‐Tol)2(O2C‐m‐Tol)2] ( 4 ) (bpe=1,2‐bis(4′‐pyridyl)ethylene), have been synthesised and investigated for their solid‐state photoreactivity. CPs 2 – 4 , having a parallel orientation of bpe molecules in their ladder structures and being bridged by carboxylates, were found to be photoreactive, whereas CP 1 is a linear one‐dimensional (1D) CP with guest water molecules aggregating to form a hydrogen‐bonded 1D structure. The linear strands of 1 were found to pair up upon eliminating lattice water molecules by heating, which led to the solid‐state structural transformation of photostable linear 1D CP 1 into photoreactive ladder CP 2 . In the construction of the double‐stranded ladder‐like structures, the parallel alignment of C?C bonds in 2 – 4 is dictated by the chelating and μ2‐η21 bridging modes of the benzoate and toluate ligands. The role of solvents in the formation of such double‐stranded ladder‐like structures has also been investigated. A single‐crystal‐to‐single‐crystal transformation occurred when 4 was irradiated under UV light to form [Pb2(rctt‐tpcb)(μ‐O2C‐m‐Tol)2(O2C‐m‐Tol)2] ( 5 ).  相似文献   

10.
A known trinuclear structure was used to design the heterobimetallic mixed‐valent, mixed‐ligand molecule [CoII(hfac)3?Na?CoIII(acac)3] ( 1 ). This was used as a template structure to develop heterotrimetallic molecules [CoII(hfac)3?Na?FeIII(acac)3] ( 2 ) and [NiII(hfac)3?Na?CoIII(acac)3] ( 3 ) via isovalent site‐specific substitution at either of the cobalt positions. Diffraction methods, synchrotron resonant diffraction, and multiple‐wavelength anomalous diffraction were applied beyond simple structural investigation to provide an unambiguous assignment of the positions and oxidation states for the periodic table neighbors in the heterometallic assemblies. Molecules of 2 and 3 are true heterotrimetallic rather than a statistical mixture of two heterobimetallic counterparts. Trinuclear platform 1 exhibits flexibility in accommodating a variety of di‐ and trivalent metals, which can be further utilized in the design of molecular precursors for the NaMM′O4 functional oxide materials.  相似文献   

11.
Cyanide as a bridge can be used to construct homo‐ and heterometallic complexes with intriguing structures and interesting magnetic properties. These ligands can generate diverse structures, including clusters, one‐dimensional chains, two‐dimensional layers and three‐dimensional frameworks. The title cyanide‐bridged CuII–CoIII heterometallic compound, [CuIICoIII(CN)6(C4H11N2)(H2O)]n, has been synthesized and characterized by single‐crystal X‐ray diffraction analysis, magnetic measurement, thermal study, vibrational spectroscopy (FT–IR) and scanning electron microscopy/energy‐dispersive X‐ray spectroscopy (SEM–EDS). The crystal structure analysis revealed that it has a two‐dimensional grid‐like structure built up of [Cu(Hpip)(H2O)]3+ cations (Hpip is piperazinium) and [Co(CN)6]3− anions that are linked through bridging cyanide ligands. The overall three‐dimensional supramolecular network is expanded by a combination of interlayer O—H...N and N—H...O hydrogen bonds involving the coordinated water molecules and the N atoms of the nonbridging cyanide groups and monodentate cationic piperazinium ligands. A magnetic investigation shows that antiferromagnetic interactions exist in the title compound.  相似文献   

12.
CoII and CoIII complexes containing nitrite and tridentate aromatic amine compounds [bis(6-methyl-2-pyridylmethyl)amine (Me2bpa) and bis(2-pyridylmethyl)amine (bpa)] have been prepared as models of the catalytic center in Co-substituted nitrite reductase: [CoII(Me2bpa)(NO2)Cl]2 · acetone (2), CoII(Me2bpa)(NO2)2 (3), CoII(bpa)(NO2)Cl (4), CoII(bpa)(NO2)2 (5), CoIII(Me2bpa)(NO2)(CO3) (6), and CoIII(bpa)(NO2)3 (7). The X-ray crystal structure analyses of these CoII and CoIII complexes indicated that the geometries of the cobalt centers are distorted octahedral and the Me2bpa and bpa with three nitrogen donors exhibit mer- (2, 3, and 7) and fac-form (4 and 6). The coordination mode of nitrite depends on the cobalt oxidation state, to CoII through the oxygen (nitrito coordination, O- and O,O-coordination) and to CoIII through nitrogen (nitro coordination, N-coordination mode). These findings are consistent with the results of their IR spectra, except that another oxygen of the O-coordinated nitrito group in 3 might interact weakly with CoII according to its IR spectrum. Reductions of the nitrite in 2, 3, 4, and 5 to nitrogen monoxide were not accelerated in the presence of proton, perhaps due to the nitrito coordination in these CoII complexes.  相似文献   

13.
The ZnII‐CoII organic framework [Me2NH2][Zn2Co(μ3‐OH)(BTC)2(H2O)] · 2H2O ( FJI‐6 ) (H3BTC = 1, 3,5‐benzenetricarboxylic acid and DMA = N.N′‐dimethyl acetamide), was synthesized and structurally characterized. FJI‐6 shows a three‐dimensional heterometallic microporous framework with coexisting octahedral cages and one‐dimensional channels assembled by Zn2Co(μ3‐OH)(CO2)6 secondary building units. In addition, the sorption behavior and magnetic properties of FJI‐6 were investigated.  相似文献   

14.
The kinetics of oxidation of the ternary complexes [CoII(ADA)(Su)(H2O)]2? and [CoII(ADA)(Ma)(H2O)]2? (ADA?=?N-(2-acetamido)iminodiacetate, Su?=?succinate and Ma?=?maleate) by periodate have been investigated spectrophotometrically at 580?nm under pseudo-first-order conditions in aqueous medium over 30?C50?°C range, pH 3.72?C4.99, and I?=?0.2?mol?dm?3. The kinetics of the oxidation of [CoII(ADA)(Su)(H2O)]2? obeyed the rate law d[CoIII]/dt?=?[CoII(ADA)(Su)(H2O)]2?[H5IO6] {k 4 K 5?+?(k 5 K 6 K 2/[H+)}, and the kinetics oxidation of [CoII(ADA)(Ma)(H2O)]2? obeyed the rate law d[CoIII]/dt?=?k 1 K 2[CoII] T [IVII] T /{1?+?([H+]/K 7)?+?K 2[IVII] T }. The pseudo-first-order rate constant, k obs, increased with increasing pH, indicating that the hydroxo form of maleate complex, [CoII(ADA)(Ma)(OH)]3?, is the reactive species. The initial Co(III) products were slowly converted to the final products, fitting an inner-sphere mechanism. Thermodynamic activation parameters were calculated using the transition state theory equation. The initial cobalt(II) complexes were characterized by physicochemical and spectroscopic methods.  相似文献   

15.
The X-ray K-absorption edge of cobalt in some cobalt (II) and cobalt (III) complexes has been investigated using a 400 mm bent crystal spectrometer. The structure associated with the absorption edge has been used to deduce information regarding the bond lengths, the mode of bonding and the coordination of cobalt in complexes. On the basis of the results obtained, it has been concluded that Co ions are surrounded by distorted octahedra in CoII(Saltn)(H2O)2, CoIII(acac)(Saltn) whereas Co ions in CoII(Salbn) have a tetrahedral structure and Co ions in CoII(SalHn) have pseudotetrahedral structure. All the compounds exhibit slight ionic character.  相似文献   

16.
Two cobalt phosphonates, [Co2(2,2′‐bpy)2(H2O)(pbtcH)] ( 1 ) and [Co2(H2O)(pbtcH)(phen)2] ( 2 ; pbtcH5=5‐phosphonatophenyl‐1,2,4‐tricarboxylic acid, 2,2′‐bpy=2,2′‐bipyridine, phen=1,10‐phenanthroline), with layer structures are reported. Compound 1 contains O‐C‐O and O‐P‐O bridged tetramers of Co4, which are further connected by pbtcH4? units to form a layer. In compound 2 , the cobalt tetramers made up of water‐bridged Co2 dimers and O‐P‐O linkages are connected into a layer by pbtcH4? units. Upon dehydration, compounds 1 and 2 experience single‐crystal‐to‐single‐crystal (SC–SC) structural transformations to form [Co2(2,2′‐bpy)2(pbtcH)] ( 1 a ) and [Co2(pbtcH)(phen)2] ( 2 a ), respectively. The process is reversible in each case. Notably, a breathing effect is observed for 1 , accompanied by pore opening and closing due to the reorientation of the coordinated 2,2′‐bpy molecules. The transformation was also monitored by in situ IR measurements. Magnetic studies reveal that antiferromagnetic interactions are mediated between the magnetic centers in compounds 1 and 1 a , whereas ferromagnetic interactions are dominant in compound 2 .  相似文献   

17.
The crystal structures of granisetron [systematic name: 1‐methyl‐N‐(9‐methyl‐9‐azabicyclo[3.3.1]nonan‐7‐yl)indazole‐3‐carboxamide], C18H24N4O, (I), an antinauseant and antiemetic agent, and its CoII complex, diaqua[1‐methyl‐N‐(9‐methyl‐9‐azoniabicyclo[3.3.1]nonan‐7‐yl)indazole‐3‐carboxamide]cobalt(II) tetrachloride dodecahydrate, [Co(C18H25N4O)2(H2O)2]Cl4·12H2O, (II), have been determined by X‐ray diffraction. The granisetron molecule is in an extended conformation in both structures. Twisting of the central carboxamide group facilitates the CoII coordination in (II). The CoII atom is located on an inversion centre. The azabicyclononane ring adopts a chair–boat conformation in both structures. The molecules in (I) are linked into centrosymmetric dimers and form tetracyclic rings through C—H...O hydrogen‐bonding interactions. The simultaneous presence of free chloride ions in conjunction with a number of hydration water molecules in (II) provides interesting hydrogen‐bond patterns. This study can aid in the investigation of the properties of metal complexes with active pharmaceuticals in which the drug molecules play the role of a ligand.  相似文献   

18.
The reaction of Hppko (Hppko = phenyl 2‐pyridyl ketone oxime) and CoCl2 · 6H2O in the CH3OH solvent with the presence of triethylamine (NEt3) at room temperature and the exposure to air resulted in the formation of a new pentanuclear, mixed‐valence cobalt complex with the molecular formula [{CoII(CH3O)3}2{CoIII33‐O)(ppko)3}Cl2]. X‐ray single crystal analysis displays a trigonal bipyramid configuration with the terminal two CoII ions wrapping an triangle [CoIII3O]7+ core. The intermolecular C–H ··· O and C–H ··· Cl interactions form a 2D network framework. The analysis of magnetic susceptibility revealed the dominant antiferromagnetic interactions and strong orbital contribution of CoII ions.  相似文献   

19.
Four new transition metal coordination polymers, [Co(bpndc)(phen)(H2O)]n ( 1 ), [Co3(bpndc)3(2,2′‐bpy)2]n·0.5n(i‐C3H7OH) ( 2 ), and [M(bpndc)(2,2′‐bpy)2]n (M = Zn, 3 ; Cu, 4 ; H2bpndc = benzophenone ‐4,4′‐dicarboxylic acid; phen = 1,10‐phenanthroline; 2,2′‐bpy = 2,2′‐bipyridine) have been synthesized by the hydrothermal reactions and characterized by single crystal X‐ray diffraction, elemental analysis, and IR spectrum. Because of the introduction of different terminal auxiliary ligands, bpndc ligands in complexes 1 and 2 adopt different coordination modes. In complex 1 , bpndc ligands act as tridentate ligand and bridge CoII ions into 1D double‐stranded chains; while complex 2 possesses 2D (4,4) grids, where bpndc ligands adopt tetradente and pentadentate modes. Two such grids interpenetrate to form a novel catenane‐like layer. Complexes 3 and 4 are isostructural. Bpndc ligands adopt tetradentate mode and bridge metal ions forming 1D helical chains.  相似文献   

20.
Two nitrilotriacetate cobalt complexes {[CoK2(NTA)(Hmta)(H2O)3]NO3}n ( 1 ) and [{Co(4,4′‐bpy)2(H2O)4}{Co2(NTA)2(4,4′‐bpy)(H2O)2}] ( 2 ) (NTA = nitrilotriacetate anion, Hmta = hexamethylenetetramine and 4,4′‐bpy = 4,4′‐bipyridine) were prepared and characterized by IR, elemental analysis and single crystal X‐ray diffraction study. The influence of the neutral ancillary ligands on the formation of the complexes with different structures in the Co‐NTA system was discussed. The coordination of NTA and Hmta to Co2+ ions only resulted in the formation of mononuclear [Co(NTA)(Hmta)]? ions which are further connected by K+ ions and water molecules to form a three‐dimensional network. The use of 4,4′‐bpy as ancillary ligand in 2 led to the formation of separate mononuclear [Co(4,4′‐bpy)2(H2O)4]2+ and dinuclear [Co2(NTA)2(4,4′‐bpy)(H2O)2]2? which are further connected by hydrogen bonds to form a supramolecular three‐dimensional network. In these cases it seems to suggest that the addition of neutral ancillary ligand into the Co‐NTA system leads to the formation of lower dimensional structures when the contribution of alkali ions to the structural dimensionality is neglected.  相似文献   

设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号