Vibrational spectroscopic studies and ab initio calculations of sulfanilamide

FT-Raman and FT-IR spectra of sulfanilamide were recorded and analyzed. The vibrational frequencies of the compound have been computed using the Hartree-Fock/6-21G(*) basis and compared with the experimental values. The assignments of the observed bands were made on the basis of available literature.     

Calculation of electric-field gradients based on higher-order generalized Douglas-Kroll transformations

In this paper, the calculation of electric-field-like properties based on higher-order Douglas-Kroll-Hess (DKH) transformations is discussed. The electric-field gradient calculated within the Hartree-Fock self-consistent field framework is used as a representative property. The properties are expressed as an analytic first derivative of the four-component Dirac energy and the nth-order DKH energy, respectively. The differences between a "forward" transformation of the relativistic energy or the "back transformation" of the wave function is discussed in some detail. Detailed test calculations were carried out on the electric-field gradient at the halogen nucleus in the series HX (X=F,Cl,Br,I,At) for which extensive reference data are available. The DKH method is shown to reproduce (spin-free) four-component Dirac-Fock results to an accuracy of better than 99% which is significantly closer than previous DKH studies. The calculations of both the Hamiltonian and the property operator are shown to be essentially converged after the second-order transformation, even for elements as heavy as At. In addition, we have obtained results within the density-functional framework using the DKHZ and zeroth-order regular approximation (ZORA) methods. The latter results included picture-change effects at the scalar relativistic variant of the ZORA-4 level and were shown to be in quantitative agreement with earlier results obtained by van Lenthe and Baerends. The picture-change effects are somewhat smaller for the ZORA method compared to DKH. For heavier elements significant differences in the field gradients predicted by the two methods were found. Based on comparison with four-component Dirac-Kohn-Sham calculations, the DKH results are more accurate. Compared to the spin-free Dirac-Kohn-Sham reference values, the ZORA-4 formalism did not improve the results of the ZORA calculations.     

Vibrational spectroscopic studies and ab initio calculations of 2-cyanophenylisocyanid dichloride

FT-Raman and FT-IR spectra of 2-cyanophenylisocyanid dichloride were recorded and analyzed. The vibrational frequencies of the title compound have been computed using the Hartree-Fock/6-31G* basis and compared with the experimental values. The prepared compound was identified by NMR and mass spectra.     

Vibrational spectroscopic studies, conformations and ab initio calculations of 3,3,3-trifluoropropyltrichlorosilane

Infrared spectra of 3,3,3-trifluoropropyltrichlorosilane (CF3CH2CH2SiCl3) were obtained in the vapour, amorphous and crystalline solid phases in the range 4000-50 cm-1. Additional spectra in argon matrices at 5.0 K were recorded before and after annealing to 20-36 K. Raman spectra of the compound as a liquid were recorded at various temperatures between 298 and 210 K and spectra of the amorphous and crystalline solids were obtained. The spectra suggested the existence of two conformers (anti and gauche) in the fluid phases and in the matrix. When the vapour was shock-frozen on a cold finger at 80 K and subsequently annealed to 120-150 K, six weak or very weak Raman bands vanished in the crystal. Similar variations were observed in the corresponding infrared spectra after annealing and four very weak IR bands disappeared after crystallization. From intensity variations between 298 and 210 K of three Raman band pairs an average value Delta(conf)H degrees (gauche-anti)=6.1+/-0.5 kJmol-1 was obtained in the liquid. Annealing experiments indicate that the anti conformer also has a lower energy in the argon matrices. The conformational equilibrium is highly shifted towards anti in the liquid, and the low energy conformer also forms the crystal. The spectra of the abundant anti conformer and the few bands ascribed to the gauche conformer have been interpreted. Ab initio calculations at the HF/6-311G(**) and B3LYP/6-311G(**) gave optimized geometries, infrared and Raman intensities and vibrational frequencies for the anti and gauche conformers. The conformational energy differences derived were 11.8 and 9.2 kJmol-1 from the HF and the B3LYP calculations, respectively.     

Vibrational spectroscopic studies and ab initio calculations of Goniothalamin, a natural product

5,6-Dihydro-6-styryl-2-pyrone (Goniothalamin), is isolated from the leaves of Goniothalamus wightii and identified by spectral analysis and X-ray diffraction studies. FT-IR spectroscopy has also been used to characterize the vibrational bands. The vibrational wavenumbers and corresponding vibrational assignments are examined theoretically using the Gaussian03 set of quantum chemistry codes. Predicted IR and Raman intensities are reported.     

Synthesis,spectroscopic and configurational study,and ab initio calculations of new diazaphospholanes

New 2-substituted diazaphospholane-2-oxides (I-III, V-VIII) and diazaphosphorinane-2-oxide (IV) were synthesised and characterised by ¹H, ¹³C, and ³¹P NMR, IR spectroscopy, and elemental analysis. The presence of chiral diamino groups in compounds II and V–VIII gives rise to various diastereomers so that the ³¹P{¹H} NMR spectra demonstrated three and two peaks with different ratios, respectively. Also, the ¹H and ¹³C{¹H} NMR spectra of compounds II and V–VIII revealed three and two sets of signals for the related conformers (diastereomers). Interestingly, the ³¹P NMR spectrum of V in D₂O indicated a great upfield shift (Δδ = 19.0) for ³¹P relative to the value obtained in DMSO-d₆ (solvent effect). The two signals in V split further to three signals in the presence of β-cyclodextrin. Moreover, conformational analysis of diazaphospholane V was studied by ab initio calculations at the HF and B3LYP levels of theory using the Gaussian 98 program. Results indicated that among four suggested diastereomers (C1–C4) of V, C1 and C3 containing methyl group in the equatorial position are the most stable forms.     

Relation between different variants of the generalized Douglas-Kroll transformation through sixth order

Wolf et al. have recently investigated a generalized Douglas-Kroll transformation. From a general class of unitary transformations that can be used in the Douglas-Kroll transformation, they pick one which is supposed to give, at a given order, an optimal transformed Dirac Hamiltonian. Results were presented through the fifth order. However, no data were given to demonstrate to which extent the so-called "optimal" Douglas-Kroll transformation is superior to other choices. In this work, the Douglas-Kroll transformation is extended to the sixth order for the first time, using computer algebra algorithms to obtain the working equations. It is shown how, at a given order, different variants of the Douglas-Kroll Hamiltonians are related. Various choices of the generalized transformation are examined numerically for the ground states of the one-electron atomic ions with nuclear charges Z=20, 40, 60, 80, 100, and 120. It is shown that compared to the improvement obtained by including the next order, the differences between various choices for the generalized Douglas-Kroll transformation are almost negligible. Results closest to the Dirac eigenvalues are not obtained with the optimal Douglas-Kroll transformation given by Wolf et al., but with the parametrization originally suggested by Douglas and Kroll.     

Similarity transformation of the ab initio density matrix

Bond orders and hybrid populations have been calculated from the density matrix localized in molecular space using similarity transformation for some fluorobenzene with the minimal basis set using Gaussian series of program. The ab initio bond orders and hybrid populations have been compared with the semiempirical calculations on this set of molecules. Also, these bond orders have been used in Coulson's bond order-bond length relationship to estimate bond lengths. The present calculations suggest that the qualitative predictions of molecular geometries are possible from these bond orders.     

Vibrational spectrum, conformational stability, structural parameters and ab initio calculations of dimethylaminodifluorophosphine

From analysis of the infrared and Raman spectra along with support from the ab initio predictions it is concluded that there is only one stable conformer of dimethylaminodifluorophosphine, (CH(3))(2)NPF(2), in the gaseous and liquid phases which has a planar PNC(2) moiety with C(s) symmetry. The adjusted r(0) structural parameters have been obtained by combining the MP2(full)/6-311+G(d) predicted values with the previous reported rotational constants for four isotopomers obtained from previously reported microwave studies. The difference in the two NC distances is 0.002A whereas, these two parameters were previously assumed to have the same values from the microwave and electron diffraction studies but a reported difference of 0.025A from the structural parameters of the crystal. The adjusted r(0) heavy atom distances and angles are: r(PF)=1.593(3); r(NP)=1.654(3); r(NC(i))=1.455(3); r(NC(o))=1.453(3) A; angleFPF=93.5(5); angleNPF=100.8(5); angleCNC=116.0(5); angleC(i)NP=124.1(5); angleC(o)NP=120.0 degrees . The planar bonding around the nitrogen atom is consistent with the previously reported structural information from the microwave study but differs from the slightly pyramidal bonding obtained in the electron diffraction investigation. To support the vibrational assignment MP2(full) ab initio calculations with the 6-31G(d) basis set were carried out to predict the fundamental vibrational frequencies, infrared intensities, Raman activities, depolarization values, infrared band contours, and centrifugal distortion constants. Vibrational assignments are given for (CH(3))(2)NPF(2) and (CD(3))(2)NPF(2) and comparisons are made with the predicted intensities, frequencies and centrifugal distortion constants. Frequencies of some of the lattice modes are reported from both the infrared and Raman spectra with suggested assignments based on the factor group symmetry of the crystal of D(2h)(16) (Pnma) with four molecules per primitive cell. These results are compared to the corresponding quantities of some similar molecules.     

Simultaneous ab initio calculations of isoelectronic diatomic molecules

Large gaussian basis sets are employed in simultaneous configuration interaction calculations for the ground states of isoelectronic diatomic molecules. The resulting potential energy curves for three members respectively of four different isoelectronic molecule sequences show the applicability of the method. Comparisons with available results of standard configuration interaction calculations for selected molecules are given. Using our method we often get lower upper bounds for the electronic energy, save computer time and treat physically totally different molecules simultaneously.     

Large-scale ab initio calculations of archetypical ionic liquids

Fully ab initio large-scale calculations of archetypical ionic liquids consisting of up to eight ion pairs are presented for the first time. These are used to validate the computationally efficient Fragment Molecular Orbital approach applied to these semi-Coulombic systems, paving the way towards accurate prediction of their transport properties.     

Semiempirical and ab initio transition state calculations for the transformation of N-acetyltetrazoles into corresponding 1,3,4-oxadiazoles

The transformation of 2-acetyl-5-substituted-tetrazoles into the corresponding 1,3,4-oxadiazoles was studied with the semiempirical and ab initio methods. Two mechanisms, one with two transition states and the other with three, were elucidated by . The first mechanism supported by PM3 and MNDO has a two-step, almost concerted, mechanism for the elimination of a nitrogen molecule from the tetrazole ring and formation of the oxadiazole product from an open-chain intermediate through carbon C₅ and acetyl oxygen bond formation. The second mechanism supported by AM1 and MINDO/3 breaks the elimination of the nitrogen molecule into two steps: first breaking the N₄-C₅ and then the N₂-N₃ bonds. Even when the AM1 and MINDO/3 transition state structures were optimized by PM3 and MNDO, the obtained transition states present only one bond breaking. The HF/STO-3G and HF/3-21G ab initio methods agree with the first mechanism where two bonds are breaking almost simultaneously. Despite the disagreement in the mechanism of the nitrogen elimination, the transition state that presents the product formation from open-chain intermediates is quite similar for all methods studied. The semiempirical calculation of this transition state is possible only if it is assumed that it has biradical character. The activation energies calculated by PM3 seem to be insensitive to the nature of the substituents.     

Vibrational spectroscopic studies and ab initio calculations of 5-methyl-2-(p-fluorophenyl)benzoxazole

FT-Raman and FT-IR spectra of 5-methyl-2-(p-fluorophenyl)benzoxazole were recorded and analysed. The vibrational frequencies of the compound have been computed using the Hartree-Fock/6-31G* basis and compared with the experimental values.     

Vibrational spectroscopic studies and ab initio calculations of 5-methyl-2-(p-methylaminophenyl)benzoxazole

FT-IR spectra of 5-methyl-2-(p-methylaminophenyl)benzoxazole was recorded and analysed. The vibrational frequencies of the compound have been computed using the Hartree-Fock/6-31G* basis and compared with the experimental values.     

MRD-CI calculations of proton affinity within the ab initio method for approximation of the frozen molecular fragment

The method of approximation of the frozen molecular fragment (FMF) we derived has been applied to calculations of proton affinities. Results are in good agreement with experimental data and extended basis set calculations.     

Rotationally invariant ab initio evaluation of Coulomb and exchange parameters for DFT+U calculations

Conventional density functional theory (DFT) fails for strongly correlated electron systems due to large intra-atomic self-interaction errors. The DFT+U method provides a means of overcoming these errors through the use of a parametrized potential that employs an exact treatment of quantum mechanical exchange interactions. The parameters that enter into this potential correspond to the spherically averaged intra-atomic Coulomb (U) and exchange (J) interactions. Recently, we developed an ab initio approach for evaluating these parameters on the basis of unrestricted Hartree-Fock (UHF) theory, which has the advantage of being free of self-interaction errors and does not require experimental input [Mosey and Carter, Phys. Rev. B 76, 155123 (2007)]. In this work, we build on that method to develop a more robust and convenient ab initio approach for evaluating U and J. The new technique employs a relationship between U and J and the Coulomb and exchange integrals evaluated using the entire set of UHF molecular orbitals (MOs) for the system. Employing the entire set of UHF MOs renders the method rotationally invariant and eliminates the difficulty in selecting unambiguously the MOs that correspond to localized states. These aspects overcome two significant deficiencies of our earlier method. The new technique is used to evaluate U and J for Cr(2)O(3), FeO, and Fe(2)O(3). The resulting values of U-J are close to empirical estimates of this quantity for each of these materials and are also similar to results of constrained DFT calculations. DFT+U calculations using the ab initio parameters yield results that are in good agreement with experiment. As such, this method offers a means of performing accurate and fully predictive DFT+U calculations of strongly correlated electron materials.     

Stereoelectronic structure of methoxyphenyltrichlorostannanes by the results of ab initio calculations

The RHF/3-21G* and MP2/3-21G* levels were implemented for the study of the stereoelectronic structure of 2- and 4-methoxyphenyl- and 2,6-dimethoxyphenyltrichlorostannanes. In the 4-methoxyphenyltrichlorostannane the Sn atom is tetracoordinated, while in 2-methoxy- and 2,6-dimethoxyphenyltrichlorostannanes it is pentacoordinated due to the intramolecular interaction of the O atom with it. In this case a closure occurs of a 4-membered ring. In the last molecule, the Sn atom interacts almost exclusively with only one of the O atoms. The intramolecular interaction between the Sn and O atoms leads to the electron density transfer from C and H atoms of the methoxy groups as well as from the Sn atom to the atoms of its coordination polyhedron. As a result the electron density increases also on the O atom involved in this interaction.     

Role of the exchange-correlation potential in ab initio electron transport calculations

The effect of the exchange-correlation potential in ab initio electron transport calculations is investigated by constructing optimized effective potentials using different energy functionals or the electron density from second-order perturbation theory. The authors calculate electron transmission through two atomic chain systems, one with charge transfer and one without. Dramatic effects are caused by two factors: changes in the energy gap and the self-interaction error. The error in conductance caused by the former is about one order of magnitude while that caused by the latter ranges from several times to two orders of magnitude, depending on the coupling strength and charge transfer. The implications for accurate quantum transport calculations are discussed.