Tryptophan-based peptides to synthesize gold and silver nanoparticles: a mechanistic and kinetic study

Synthetic oligopeptides with a tryptophan residue at the C-terminus have been used for the synthesis of gold and silver nanoparticles at pH 11. The tryptophan residue in the peptides is responsible for the reduction of metal ions to the respective metals, possibly through electron transfer. A mechanistic pathway has been proposed to explain the reductive properties of the tryptophan moiety of the peptide based on some spectroscopic techniques, such as UV-visible and fluorescence spectroscopy. This study reveals that some of the peptide molecules are converted to its corresponding ditryptophan, kynurenine form and some cross-linked products, all of which are highly fluorescent species. The resultant peptide-functionalized metal nanoparticles have also been characterized by UV-visible spectroscopy, transmission electron microscopy, and Fourier transform IR spectroscopy and thermogravimatric analysis.     

A mechanistic study of the formation of polymer nanoparticles by the emulsification-diffusion technique

 The mechanism of formation of polymer nanoparticles prepared by the emulsification–diffusion method was evaluated under different preparation conditions and by turbidimetry measurements. Biodegradable poly (D,L-lactic acid) was used as the polymer model. The results show that each emulsion droplet will form several nano-particles and that the interfacial phenomena during solvent diffusion determine the size properties of the resulting colloid particles. These phenomena cannot be entirely explained by the convection effects caused by interfacial turbulence. We suggest that nanoparticle formation is due to diffusion alone, and we propose a mechanism based on the “diffusion-stranding” mechanism for spontaneous emulsification. In this mechanism, the diffusion of solvent causes local supersaturation near the interface, and nanoparticles are formed, due to the phase transformation and polymer aggregation that occur in these regions. This interpretation is supported by the turbidity measurements made at different polymer concentrations and stirring rates. Received: 30 October 1996 Accepted: 27 March 1997     

A kinetic study of the formation of polystyrene stars using 1,2-bis(trichlorosilyl)ethane

The kinetics of formation of a chlorosilane-linked polystyrene six-arm star is reported. The precursor arm material (M_n = 88,000) was made using anionic polymerization in benzene. Prior to addition to the 1,2-bis(trichlorosilyl) ethane linking agent, the anions were endcapped with about five units of isoprene. Size exclusion chromatography using multiangle laser light scattering and viscosity detectors was utilized for characterization. This technique has allowed the molecular weights, radii of gyration, and intrinsic viscosities to be measured for star components in aliquots taken from the reactor at various times. It was found that four-arm star is formed within 30 min after the addition of the chlorosilane linking agent. There is a linear relationship between the logarithm of molecular weight of the star samples and logarithm of time of the reaction after the formation of the four-arm star. © 1997 John Wiley & Sons, Inc. J Polym Sci B: Polym Phys, 35: 587–594, 1997     

A mechanistic study of the hydrogenation of cyclohexene catalyzed by dimethylzirconocene

A kinetic study of the hydrogenation of cyclohexene in the presence of phenylsilane and catalytic amounts of dimethylzirconocene has been carried out. The rate law for the reaction was deduced to be of the form of rate =k[catalyst][silane]^3/2 [olefin]⁰, showing that the catalytically active species would be a hydridosilylzirconium complex formed by the reaction of dimethylzirconocene with phenylsilane     

Nitrosation of N-methylhydroxylamine by nitroprusside. A kinetic and mechanistic study

The kinetics of the reaction between aqueous solutions of Na(2)[Fe(CN)(5)NO].2H(2)O (sodium pentacyanonitrosylferrate(ii), nitroprusside, SNP) and MeN(H)OH (N-methylhydroxylamine, MeHA) has been studied by means of UV-vis spectroscopy, using complementary solution techniques: FTIR/ATR, EPR, mass spectrometry and isotopic labeling ((15)NO), in the pH range 7.1-9.3, I = 1 M (NaCl). The main products were N-methyl-N-nitrosohydroxylamine (MeN(NO)OH) and [Fe(CN)(5)H(2)O](3-), characterized as the [Fe(CN)(5)(pyCONH(2))](3-) complex (pyCONH(2) = isonicotinamide). No reaction occurred with Me(2)NOH (N,N-dimethylhydroxylamine, Me(2)HA) as nucleophile. The rate law was: R = k(exp) [Fe(CN)(5)NO(2-)] x [MeN(H)OH] x [OH(-)], with k(exp) = 1.6 +/- 0.2 x 10(5) M(-2) s(-1), at 25.0 degrees C, and DeltaH(#) = 34 +/- 3 kJ mol(-1), DeltaS(#) = -32 +/- 11 J K(-1) mol(-1), at pH 8.0. The proposed mechanism involves the formation of a precursor associative complex between SNP and MeHA, followed by an OH(-)-assisted reversible formation of a deprotonated adduct, [Fe(CN)(5)(N(O)NMeOH)](3-), and rapid dissociation of MeN(NO)OH. In excess SNP, the precursor complex reacts through a competitive one-electron-transfer path, forming the [Fe(CN)(5)NO](3-) ion with slow production of small quantities of N(2)O. The stoichiometry and mechanism of the main adduct-formation path are similar to those previously reported for hydroxylamine (HA) and related nucleophiles. The nitrosated product, MeN(NO)OH, decomposes thermally at physiological temperatures, slowly yielding NO.     

A kinetic study of the interaction of DNA with gold nanoparticles: mechanistic aspects of the interaction

A kinetic study of the interaction of gold nanoparticles capped with N-(2-mercaptopropionyl)glycine with double stranded DNA was carried out in water and in salt (NaCl) solutions. The kinetic curves are biexponential and reveal the presence of three kinetic steps. The dependence of the reciprocal fast and slow relaxation time, on the DNA concentration, is a curve and tends to a plateau at high DNA concentrations. The simplest mechanism consistent with the kinetic results involves a simple three-step series mechanism reaction scheme. The first step corresponds to a very fast step that is related to a diffusion controlled formation of an external precursor complex (DNA, AuNPs); the second step involves the formation of a (DNA/AuNPs)(I) complex, as a result of the binding affinity between hydrophilic groups of the tiopronin and the DNA grooves. Finally, the third step has been interpreted as a consequence of a conformational change of the (DNA/AuNPs)(I) complex formed in the second step, to a more compacted form (DNA/AuNPs)(II). The values of the rate constants of each step decrease as NaCl concentration increases. The results have been discussed in terms of solvation of the species and changes in the viscosity of the solution.     

A mechanistic and kinetic study on the decomposition of morpholine

The combustion chemistry of morpholine (C(4)H(8)ONH) has been experimentally investigated recently as a representative model compound for O- and N-containing structural entities in biomass. Detailed profiles of species indicate the self-breakdown reactions prevailing over oxidative decomposition reactions. In this study, we derive thermodynamic and kinetic properties pertinent to all plausible reactions involved in the self-decomposition of morpholine and its derived morphyl radicals as a crucial task in the development of comprehensive combustion mechanism. Potential energy surfaces have been mapped out for the decomposition of morpholine and the three morphyl radicals. RRKM-based calculations predict the self-decomposition of morpholine to be dominated by 1,3-intramolecular hydrogen shift into the NH group at all temperatures and pressures. Self-decomposition of morpholine is shown to provide pathways for the formation of the experimentally detected products such as ethenol and ethenamine. Energetic requirements of all self-decomposition of morphyl radicals are predicted to be of modest values (i.e., 20-40 kcal/mol) which in turn support the occurrence of breaking-down reactions into two-heavy-atom species and the generation of doubly unsaturated four-heavy-atom segments. Calculated thermochemical parameters (in terms of standard enthalpies of formation, standard entropies, and heat capacities) and kinetic parameters (in terms of reaction rate constants at a high pressure limit) should be instrumental in building a robust kinetic model for the oxidation of morpholine.     

Synthesis and shapes of gold nanoparticles by using transition metal monosubstituted heteropolyanions as photocatalysts and stabilizers

Gold nanoparticles were prepared via a simple photoreduction technique in the presence of transition metal monosubstituted Keggin heteropolyanions (PW11M, M= Cu²⁺, Ni²⁺, Zn²⁺, Fe³⁺), in which PW11M acted as reducing agent, photocatalyst and stabilizer. The results indicated that the formation rate and morphology of the nanoparticles strongly depended on the kind of transition metal substituted in heteropolyacid and the preparation conditions, such as irradiation time and propan-2-ol amount. The photoreduction rates of PW11Zn and PW11Fe were faster than those of PW11Ni and PW11Cu. The shapes of the nanoparticles synthesized in the presence of PW11Fe and PW11Zn were nearly uniform spheres, whereas the morphologies of the nanoparticles synthesized in the presence of PW11Ni and PW11Cu were found to contain a mixture of flat triangular/hexagonal structures as well as spheres. Increases in the irradiation time and the propan-2-ol amount could make the morphology of nanoparticles uniform and shorten the formation time of the nanoparticles. __________ Translated from Chinese Journal of Applied Chemistry, 2007, 24(7) (in Chinese)     

Thallation of fluorenes: A kinetic and mechanistic study

The kinetics of thallation of fluorene with thallium triacetate (TTA) in HOAc-H₂SO₄ solutions led to the rate expression The rate of thallation is found to increase with increasing acid concentration, and a sixth-order dependence on [H₂SO₄] is observed. Decrease in solvent polarity increases the rate of thallation. The effect of substituents is in accord with the electrophilic substitution at an aromatic system. Thallation occurs at 4-position. A mechanism similar to aromatic bromination is proposed for the thallation of fluorene.     

New mechanistic insights into the iridium-phosphanooxazoline-catalyzed hydrogenation of unfunctionalized olefins: a DFT and kinetic study

The reaction mechanism of the iridium-phosphanooxazoline-catalyzed hydrogenation of unfunctionalized olefins has been studied by means of density functional theory calculations (B3LYP) and kinetic experiments. The calculations suggest that the reaction involves an unexpected Ir(III)-Ir(V) catalytic cycle facilitated by coordination of a second equivalent of dihydrogen. Thus, in the rate-determining migratory insertion of the substrate alkene into an iridium-hydride bond, simultaneous oxidative addition of the bound dihydrogen occurs. The kinetic data shows that the reaction is first order with respect to hydrogen pressure. This is interpreted in terms of an endergonic coordination of this second equivalent of dihydrogen, although a rate-determining step, in which coordinated solvent is replaced by dihydrogen, could not be ruled out. Furthermore, the reaction was found to be zeroth order with respect to the alkene concentration. This correlates well with the calculated exothermicity of substrate coordination, and the catalyst is thus believed to coordinate an alkene in the resting state. On the basis of the proposed catalytic cycle, calculations were performed on a full-sized system with 88 atoms to assess the appropriateness of the model calculations. These calculations were also used to explain the enantioselectivity exerted by the catalyst.     

Controlling the Size and Morphology of Au@Pd Core–Shell Nanocrystals by Manipulating the Kinetics of Seeded Growth

This article reports a systematic study of the seed‐mediated growth of Au@Pd core–shell nanocrystals with a variety of controlled sizes and morphologies. The key to the success of this synthesis is to manipulate the reaction kinetics by tuning a set of reaction parameters, including the type and concentration of capping agent, the amount of ascorbic acid used as the reducing agent, and the injection rate used for the precursor solution. Starting from Au nanospheres of 11 nm in diameter as the seeds, Au@Pd core–shell nanocrystals with a number of morphologies, including octahedra, concave octahedra, rectangular bars, cubes, concave cubes, and dendrites, could all be obtained by simply altering the reaction rate. For the first time, it was possible to generate Au@Pd nanocrystals with concave structures on the surfaces while their sizes were kept below 20 nm. In addition, the as‐prepared Au@Pd nanocubes can be used as seeds to generate Au@Pd@Au and Au@Pd@Au@Pd nanocrystals with multishelled structures.     

Oxidative transformation of ciprofloxacin by alkaline permanganate – A kinetic and mechanistic study

This spectroscopic study presents the kinetics and degradation pathways of oxidation of ciprofloxacin by permanganate in alkaline medium at constant ionic strength of 0.04 mol⁻³. Orders with respect to substrate, oxidant and alkali concentrations were determined. Effect of ionic strength and solvent polarity of the medium on the rate of the reaction was studied. The oxidation products were identified by LC-ESI-MS technique. Product characterization of ciprofloxacin reaction mixtures indicates the formation of three major products corresponding to m/z 263, 306, and 348 (corresponding to full or partial dealkylation of the piperazine ring). The piperazine moiety of ciprofloxacin is the predominant oxidative site to KMnO₄. Product analyses showed that oxidation by permanganate results in dealkylation at the piperazine moiety of ciprofloxacin, with the quinolone ring essentially intact. The reaction kinetics and product characterization point to a reaction mechanism that likely begins with formation of a complex between ciprofloxacin and the KMnO₄, followed by oxidation at the aromatic N1 atom of piperazine moiety to generate an anilinyl radical intermediate. The radical intermediates subsequently undergo N-dealkylation. Investigations of the reaction at different temperatures allowed the determination of the activation parameters with respect to the slow step of proposed mechanism. The proposed mechanism and the derived rate laws are consistent with the observed kinetics.     

Oxidation of dimethylsulphoxide by sodium m-bromobenzene- sulphonamide: A kinetic and mechanistic study

The kinetics of oxidation of dimethylsulphoxide (DMSO) by sodium N-bromobenzenesulphonamide or bromamine-B (BAB) has been studied in HClO₄, HCl and NaOH media, at 35°C, with OsO₄ as a catalyst in the latter medium. In acid medium, the rate shows a first order dependence on [BAB] and second order in [H⁺], but Is Independent of substrate concentration. Alkali retards the reaction (Inverse first order) and the rate is independent of oxidant concentration, but shows fractional order in [DMSO] and depends on (0sO4]². The solvent isotope effect was studied by using D₂O. Activation parameters have also been determined. Mechanisms proposed and the derived rate laws are consistent with the observed kinetics.     

Short gold nanorod growth revisited: the critical role of the bromide counterion

A one-step, surfactant-assisted, seed-mediated method has been utilized for the growth of short gold nanorods with reasonable yield by modifying an established synthesis protocol. Among the various parameters that influence nanorod growth, the impact of the bromide counterion has been closely scrutinized. During this study it has been shown that, irrespective of its origin, the bromide counterion [cetyltrimethylammonium bromide (CTAB) or NaBr] plays a crucial role in the formation of nanorods in the sense that there is a critical [Br(-)]/[Au(3+)] ratio (around 200) to achieve nanorods with a maximum aspect ratio. Beyond this value, bromide can be considered as a poisoning agent unless shorter nanorods are required. The use of AgNO(3) helps in symmetry breaking for gold nanorod growth, whereas the bromide counterion controls the growth kinetics by selective adsorption on the facets of the growth direction. Thus, a proper balance between bromide ions and gold cations is also one of the necessary parameters for controlling the size of the gold nanorods; this has been discussed thoroughly. The results have been discussed based on their absorption spectra and finally shape evolution has been confirmed by TEM. Due to their efficient absorption in the near-IR region, these short nanorods were used in photothermal imaging of living COS-7 cells with improved signal-to-background ratios.     

A kinetic and mechanistic study of the formation of alkyl nitrates in the photo-oxidation of n-heptane studied under atmospheric conditions

The photo-oxidation of n-heptane in synthetic air containing methyl nitrite and nitric oxide has been ivestigated in an atmospheric flow reactor. By measuring the total yields of heptyl nitrate products, relative to the depletion of the n-heptane, the rate constant ratio, k_3b/k_3a has been determined for the reactions: (1) Over the temperature range 253–325 K and at a total pressure of 730 Torr, the following relative Arrhenius equation has been obtained from the present study together with literature data: These results confirm that the formation of alkyl nitrates from the photo-oxidation of n-alkanes arise from a primary reaction between the alkylperoxy radicals and nitric oxide. Furthermore the present experiments show that the lifetime of the intermediate in this type of reaction, presumed to be an alkyl peroxynitrite, ROONO, must be less than a few seconds.