Bilayers, corrugated bilayers, and coordination polymers of p-sulfonatocalix[6]arene

Exploration into the host-guest supramolecular chemistry of p-sulfonatocalix[6]arene with pyridine N-oxide and 4,4'-dipyridine N,N'-dioxide has resulted in the characterization of three new structural motifs with the calixarene in the "up-down" double partial cone conformation. Two are hydrogen-bonded network structures formed with pyridine N-oxide and either nickel or lanthanide metal counterions (1 and 2, respectively). Complex 1 displays host-guest interactions between pyridine N-oxide and the calixarene in the presence of hexaaquanickel(II) counterions. Complex 2 demonstrates selective coordination modes for different lanthanides involving the calixarene and pyridine N-oxide. The third structure, 3, is a coordination polymer which is formed with 4,4'-dipyridine N,N'-dioxide molecules which span a hydrophilic layer and join lanthanide/p-sulfonatocalix[6]arene fragments. Although complexes 1-3 all have the calixarene in the "up-down" double partial cone conformation, 1 and 3 form bilayer arrangements within the extended structures while 2 forms a previously unseen corrugated bilayer arrangement.     

Interplay of p-sulfonatocalix[4]arene and crown ethers en route to molecular capsules and "Russian dolls"

Diffusion-ordered (1)H NMR spectroscopy techniques have been used to determine the binding strength of p-sulfonatocalix[4]arene (SO(3)[4]) towards a number of charged crown ether species in aqueous conditions. For several (doubly) charged (di)azacrown ethers, all were bound by SO(3)[4] either well or very well with binding constants between 5.1 x 10(2)-9.9 x 10(5) M(-1). These results correlate with, and thus explain the phenomenon of rapid capture of azacrown ethers in molecular capsules based on p-sulfonatocalix[4]arene and lanthanide metals. Similarly, the formation of "Russian doll" superanions in the solution phase is also elucidated. These superanions have been shown to selectively crystallise particular polynuclear aquated metal ions from mixtures in the aqueous phase. Neutral [18]crown-6 is not bound by p-sulfonatocalix[4]arene and displays a binding constant of 0 M(-1). When sodium [18]crown-6 is examined in a similar fashion, binding by SO(3)[4] is observed in solution with K(a) approximately 3.1 x 10(3) M(-1).     

Scandium(III) coordination polymers containing capsules based on two p-sulfonatocalix[4]arenes

Reactions of sodium p-sulfonatocalix[4]arene and scandium(III) tristriflate in the presence, and absence, of [18]crown-6 give the crystalline complexes [Sc2(mu-OH)2(H2O)10][Na4(H2O)8-[calix[4]arene(SO3)4]2).13 H2O and [[Sc2(mu-OH)2(H2O)8][Sc(H2O)4]2[calix[4]-arene(SO3)4-H+]2([18]crown-6).16H2O. Both complexes involve novel coordination polymers with calixarene units linked through sodium or scandium centers and also feature capsule assemblies through to the head-to-head association of calixarenes. A linear array of capsules associated with an infinite chain of aquo-bridged sodium ions, and an aquated hydroxy-bridged scandium(III) dimer, [Sc2(mu-OH)2(H2O)10]4+, are found in the absence of the crown ether. In the presence of [18]crown-6 both hydrated scandium monomers and dimers bridge between calixarenes in a two-dimensional coordination network. The crown ethers reside in cavities created by two calixarenes from adjacent polymeric sheets via a variety of supramolecular interactions(hydrogen-bonding, shape complementarity), and effectively add a third dimension to the network. The extended structure of both of these polymers is highly porous, and resembles a bilayer.     

'Molecular capsules' based on p-sulfonatocalix[6]arene shrouding two tetraphenylphosphonium cations

p-Sulfonatocalix[6]arene in the double cone conformation forms a molecular capsule-like arrangement confining two tetraphenylphosphonium cations, as part of an extended structure involving layers of additional tetraphenylphosphonium cations, aquated lanthanide ions and a large array of water molecules.     

Lanthanide crown ether complexes of p-sulfonatocalix[5]arene

Two types of arrays are formed in water involving aza-crown ethers, p-sulfonatocalix[5]arene and europium(III) ions. One is a co-ordination polymer connecting calixarenes, sodium ions and lanthanide ions based on "ferris wheel" moieties incorporating aza-18-crown-6 and sodium ions. The second structure is a host-guest arrangement with di-protonated diaza-18-crown-6 in the cavity of the calixarenes as part of secondary coordination spheres of aquated europium(iii) ions.     

Inclusion controlled lanthanide-imidazolium functionalised carboxylate complexation

Imidazolium functionalized carboxylic acid forms a multi-component material with p-sulfonatocalix[4]arene and aquated lanthanide ions, stabilising dinuclear metal complexes for Y(3+) and Gd(3+). These have the simplest binding of two bridging carboxylates between the two metal centres (Y(3+)), or the same arrangement along with the simplest binding of one carboxylate bridging two metal ions for the larger metal ion (Gd(3+)).     

Synthesis and characterisation of helical beta-peptide architectures that contain (S)-beta3-HDOPA(Crown Ether) derivatives

A new set of beta-amino acids that carry various crown ether receptors on their side chains of the general formula (S)-beta(3)-HDOPA(crown ether) (HDOPA: homo-3,4-dihydroxyphenylalanine; (crown ether): [15]crown-5 ([15-C-5]), [18]crown-6 ([18-C-6]), [21]crown-7 ([21-C-7]), 1,2-Benzo-[24]crown-8 ([Benzo-24-C-8]) and (R)-Binol-[20]crown-6 ([(R)-Binol-20-C-6])) was prepared. Peptides that are based on these new crowned beta-amino acids combined with (1S,2S)-ACHC (2-aminocyclohexanecarboxylic acid), which is known to be a potent 3(14)-helix inducer, to the hexamer level, with two crowned residues at the i and i+3 positions of the main-chain, were synthesized in solution by stepwise coupling using Boc-N(alpha)-protection (Boc: tert-butoxycarbonyl) and the EDC/HOAt C-activation method. Their conformational analysis was performed by using FTIR absorption, NMR and CD spectroscopy techniques. Our results are in full agreement with a 3(14)-helix conformation.     

Shape recognition of alkylammonium ions by 1,3-bridged calix[5]arene crown-6 ethers: endo- vs exo-cavity complexation

A series of tri-O-substituted 1,3-bridged calix[5]arene crown-6 ethers bearing alkyl, arylalkyl, alkoxyalkyl, and alkoxycarbonylmethyl residues at the lower rim and either (t)()Bu or H substituents at the upper rim have been synthesized. (1)H NMR studies have shown that p-tert-butylcalix[5]crowns, irrespective of the size and nature of their lower rim pendant groups, adopt preorganized conelike conformations, whereas p-H-calix[5]crowns with bulky substituents preferentially exist in solution as partial cone conformers (C(1) symmetry). Calix[5]crown derivatives behave as mono- or ditopic receptors for isomeric butylammonium ions, forming endo-cavity (inside the calixarene cup) and/or exo-cavity (at the crown ether moiety) 1:1 complexes according to the shape of the guest. These two binding modes can be clearly distinguished and monitored by (1)H NMR titration experiments.     

Supramolecular cation assemblies of hydrogen-bonded (NH4+/NH2NH3+)(crown ether) in [Ni(dmit)2]-based molecular conductors and magnets

Hydrogen-bonded supramolecular cation assemblies of (NH4+/NH2-NH3+)(crown ether), where the crown ether is [12]crown-4, [15]crown-5, or [18]crown-6, were incorporated into electrically conducting [Ni(dmit)2] salts (dmit2- = 2-thioxo-1,3-dithiole-4,5-dithiolate). (NH4+)([12]crown-4)[Ni(dmit)2]3(CH3CN)2 had a pyramidal shape, while ionic channels were observed in (NH4+)(0.88)([15]crown-5)[Ni(dmit)(2)]2 and (NH4+)(0.70)([18]crown-6)[Ni(dmit)(2)]2. Both (NH4+)(0.88)([15]crown-5) and (NH4+)(0.70)([18]crown-6) contained regularly spaced [Ni(dmit)(2)] stacks formed by N-H.O hydrogen bonding between the oxygen atoms in crown ethers and the NH4+ ion. NH4+ occurred nonstoichiometrically; there were vacant ionic sites in the ionic channels. The ionic radius of NH4+ is larger than the cavity radius of [15]crown-5 and [18]crown-6. Therefore, NH4+ ions could not pass through the cavity and were distributed randomly in the ionic channels. The static disorder caused the conduction electrons to be randomly localized to the [Ni(dmit)2] stacks. Hydrazinium (NH2-NH3+) formed the supramolecular cations in (NH2-NH3+)([12]crown-4)2[Ni(dmit)2]4 and (NH2-NH3+)2([15]crown-5)3[Ni(dmit)2]6, possessing a sandwich and club-sandwich structure, respectively. To the best of our knowledge, these represent the first hydrazinium-crown ether assemblies to be identified in the solid. In the supramolecular cations, hydrogen bonding was detected between the ammonium or the amino protons of NH2-NH3+ and the oxygen atoms of crown ethers. The sandwich-type cations coexisted with the [Ni(dmit)2] dimer stacks. Although the assemblies were typically semiconducting, ferromagnetic interaction (Weiss temperature = +1 K) was detected in the case of (NH2-NH3+)2([15]crown-5)3[Ni(dmit)2]6. The (NH2-NH3+)0.8([18]crown-6)[Ni(dmit)2]2 and (NH4+)0.76([18]crown-6)[Ni(dmit)2]2 crystals were isomorphous. The large and flexible [18]crown-6 allowed for maintaining the same ionic channel structure through replacement of the NH4+ cation by NH2-NH3+.     

Exploiting phenyl embraces and pi-stacking in the assembly of arrays of tetraphenylphosphonium p-sulfonatocalix[4]arene

Phenyl embraces involving tetraphenylphosphonium cations feature in complexes of p-sulfonatocalix[4]arene where a phenyl ring of a cation is included in the cavity of the calixarene. The overall structures are based on pseudo-polymorphic supramolecular arrays and their formation is templated or induced by lanthanide ions.     

Stilbene-bridged 1,3-alternate calix[4]arene crown ether for selective alkali ion extraction

A series of stilbene-bridged calix[4]arenes was synthesized through an intramolecular reductive McMurry coupling of bisbenzaldehyde calix[4]arene in high yields. Tetra- and pentaethylene glycol chains were tethered to the phenolic groups of calix[4]arene to form stilbene-bridged calix[4]arene crown-5 and crown-6, respectively. The presence of stilbene bridge over the calix[4]arene rim effectively prevented the connection of the polyether chains in the cone conformation resulting in the exclusive formation of 1,3-alternate stilbene-bridged calix[4]arene crown product. Compared to the cone analogues, the 1,3-alternate calix[4]arene crown ethers showed a greater extraction ability and selectivity toward Cs⁺.     

Crown ethers as ancillary ligands in the assembly of silver(i) aggregates containing embedded acetylenediide

Five silver(I) double salts containing embedded acetylenediide, [Ag([12]crown-4)(2)][Ag(10)(C(2))(CF(3)CO(2))(9)([12]crown-4)(2)(H(2)O)(3)] x H(2)O (2), [Ag(2)C(2) x 5 AgCF(3)CO(2) x (benzo[15]crown-5) x 2 H(2)O] x 0.5 H(2)O (3), [Ag(4)([18]crown-6)(4)(H(2)O)(3)][Ag(18)(C(2))(3)(CF(3)CO(2))(16)(H(2)O)(2.5)] x 2.5 H(2)O (4), [Ag(2)C(2) x 6 AgC(2)F(5)CO(2) x 2([15]crown-5)](2) (5), and [(Ag(2)C(2))(2) x (AgC(2)F(5)CO(2))(9) x ([18]crown-6)(2) x (H(2)O)(3.5)] x H(2)O (6), have been isolated by varying the types of crown ethers and anions employed. Single-crystal X-ray analysis has shown that complex 2 is composed of winding anionic chains with sandwiched [Ag([12]crown-4)(2)](+) ions accommodated in the concave cavities between them. In 3, silver(I) double cages each sandwiched by a couple of benzo[15]crown-5 ligands are linked by [Ag(2)(CF(3)CO(2))(2)] bridges to form a one-dimensional structure. For 4, an anionic silver column is generated through fusion of two kinds of silver polyhedra (triangulated dodecahedron and bicapped trigonal antiprism), and the charge balance is provided by aqua-ligated [Ag([18]crown-6)](+) ions. Complex 5 is a centrosymmetric hexadecanuclear supermolecule composed of two [(eta(5)-[15]crown-5)(2)(C(2)@Ag(7))(mu-C(2)F(5)CO(2))(5)] moieties connected through a [Ag(2)(C(2)F(5)CO(2))(2)] bridge. Compound 6 is a discrete supermolecule containing an asymmetric (C(2))(2)@Ag(13) cluster core capped by two [18]crown-6 ligands in mu(3)-eta(5) and mu(4)-eta(6) ligation modes.     

A series of tetrahomodioxacalix[4]biscrown-n. Syntheses, crystal structures, and metal binding abilities

A series of novel tetrahomodioxacalix[4]biscrowns with crown-2, crown-3, crown-4, crown-5, and crown-6 units were synthesized. Conformations of each product are dependent on the base used and their conformation stabilities. All conformations were proven by NMR spectra and/or X-ray crystal structures. The 1,3-alternate homodioxacalix[4]biscrown-4 (4b) shows the best selectivity for K+, whereas the 1,3-alternate homodioxacalix[4]crown-5 (5) does for Cs+. Those selectivities are attributable to electrostatic interaction between the metal ion and the crown ring, as well as a pi-metal complexation. However, the C-1,2-alternate conformation does not take the metal ions regardless of the crown species as a result of steric hindrance from the methylene bridge of an ArCH2Ar unit.     

Electrochemical investigation of nano-baskets of calix[4]-1,3-crowns-5,6 complexes

Four nano-baskets of calixarene including cone 25,27-di(carboxymethoxy)calix[4]arene-crown-5, 1,3-alternate 25,27-di[carboxymethoxy]-calix[4]arene-crown-5, cone 25,27-bis[carboxymethoxy]calix[4]arene-crown-6 and 1,3-alternate 25,27-di[carboxymethoxy]-calix[4]arene-crown-6 were synthesized and their binding abilities towards alkali and alkaline earth metals as well as some lanthanides were studied using differential pulse voltammetry. The novelty of this study was investigation of those macrocyclic complexes by voltammetric behaviors of two acidic moieties in each scaffold during complexation of crown ether ring. Their voltammetric behaviors were closely related to the complex formation by entrapment of cation into crown ether cavity and ion–dipole interaction between cation and acidic moieties in calixcrowns. The results revealed the selective changes in voltammetric behavior of synthesized scaffolds toward the cations. Moreover, the position of crown ether in 1,3-alternate instead of cone enhanced the domain of binding ability to more cations. Furthermore, it was shown that those carboxylic acid moieties, which were far from the crown ether ring in the 1,3-alternate, did not affected by encapsulated cations in the coordination space of crown ether and showed no voltammetric behavior.     

Unexpected structural diversity in alkali metal azide-crown ether complexes: syntheses, X-ray structures, and quantum-chemical calculations

A series of alkali metal azide-crown ether complexes, [Li([12]crown-4)(N3)], [Na([15]crown-5)(N3)], [Na([15]crown-5)(H2O)2]N3, [K([18]crown-6)(N3)(H2O)], [Rb([18]crown-6)(N3)(H2O)], [Cs([18]crown-6)(N3)]2, and [Cs([18]crown-6)(N3)(H2O)(MeOH)], has been synthesised. In most cases, single crystals were obtained, which allowed X-ray crystal structures to be derived. The structures obtained have been compared with molecular structures computed by density functional theory (DFT) calculations. This has allowed the effects of the crystal lattice on the structures to be investigated. Also, a study of the M-N(terminal) metal-azide bond length and charge densities on the metal (M) and terminal nitrogen centre (N(terminal)) in these complexes has allowed the nature of the metal-azide bond to be probed in each case. The bonding in these complexes is believed to be predominantly ionic or ion-dipole in character, with the differences in geometries reflecting the balance between maximising the coordination number of the metal centre and minimising ligand-ligand repulsions. The structures of the crown ether complexes determined in this work show the subtle interplay of such factors. The significant role of hydrogen bonding is also demonstrated, most clearly in the structures of the K and Rb dimers, but also in the chain structure of the hydrated Cs complex.     

Bis-functionalized fullerene-dibenzo[18]crown-6 conjugate: synthesis and cation-complexation dependent redox behavior

A one-step synthesis of bis-pyrrolidine functionalized fullerene-dibenzo[18]crown-6 conjugate and its metal cation complexation to the crown ether entity dependent redox behavior is reported.     

The influence of macrocyclic polyether constitution upon ammonium ion/crown ether recognition processes

Secondary dialkylammonium (R2NH2+) ions are bound readily by dibenzo[24]crown-8 (DB24C8) to form threaded complexes, namely [2]pseudo-rotaxanes. The effect of replacing one or both of the catechol rings in DB24C8 with resorcinol rings upon the crown ether's ability to bind R2NH2+ ions has now been investigated. When only one aromatic ring is changed from catechol to resorcinol, a crown ether with a [25]crown-8 constitution is created-namely benzometaphenylene[25]crown-8 (BMP25C8). A [2]pseudorotaxane is formed in the solid state when BMP25C8 is co-crystallized with dibenzylammonium hexafluorophosphate, as evidenced by its X-ray crystal structure. Furthermore, this crown ether has been shown to bind R2NH2+ ions in solution, an observation which has been exploited in the synthesis of the first BMP25C8-containing [2]rotaxane. The methodology employed to generate this [2]rotaxane--the reaction of an amine with an isocyanate to form a urea--was tested initially on a system incorporating DB24C8 and was shown to work efficiently. Both [2]rotaxanes have been fully characterized by 1H and 13C NMR spectroscopies, FAB mass spectrometry and X-ray crystallography. Interestingly, the unsymmetrical nature of the dumbbell-shaped component in each of the two [2]rotaxanes renders each face of the encircling macrocyclic polyether diastereotopic, a feature that is apparent upon inspection of their 1H NMR spectra. The resonances associated with the diastereotopic protons on each face of the macrorings are well enough resolved to enable the faces of the crown ethers to be readily identified with respect to their protons by 1H NMR spectroscopy. Unambiguous assignments can be made as a result of the fact that the protons on each face of the macrocyclic polyether experience a unique set of through-space interactions, as evidenced by T-ROESY experiments. Additionally, the two-dimensional NMR analyses are in agreement with the X-ray crystallographic studies performed on these [2]rotaxanes, indicating that the crown ethers are located intimately around the NH2+ centers as expected. Replacement of both catechol rings in the DB24C8 constitution with resorcinol rings results in a crown ether with a [26]crown-8 constitution--namely bismetaphenylene[26]crown-8 (BMP26CS). All the evidence to date points to the fact that this further change in constitution results in a crown ether that does not bind R2NH2+ ions in either the solution or solid states.     

Bis(crown ether) and Azobenzocrown Derivatives of Calix[4]arene. A Review of Structural Information from Crystallographic and Modelling Studies

The association within one molecule ofcalix[4]arene and crown ether moieties leads toligands with new complexing properties. In particular,calix[4]arene bis(crown-6) and some of itsderivatives have been shown to be highly selectiveextractants for caesium ions. This review presents thebackground of the study and the results of crystalstructure determinations and molecular modellingcalculations performed during the investigation of twomolecular families, the bis(crown ether) and theazobenzocrown derivatives of calix[4]arene.     

Using sol-gel/crown ether hybrid materials as desalting substrates for matrix-assisted laser desorption/ionization analysis of oligonucleotides

This study demonstrates the feasibility of using sol-gel/crown ether hybrid materials as sample substrates that reduce the intensity of the signals of sodium ion adducts of oligonucleotides during matrix-assisted laser desorption/ionization (MALDI) analysis. 2-Hydroxymethyl[15]crown-5 and 2-hydroxymethyl[18]crown-6 were added as dopants during the sol-gel process to generate desalting substrates for MALDI sample deposition. The results demonstrate that the sol-gel/crown ether hybrid materials effectively suppress the formation of sodiated oligonucleotides during MALDI analysis. The largest detectable molecular size for an oligonucleotide was a 100-mer, and the detection limit for an oligonucleotide 36-mer was ca. 20 fmol.     

Solid-state molecular rotators of anilinium and adamantylammonium in [Ni(dmit)2](-) salts with diverse magnetic properties

Supramolecular rotators of hydrogen-bonding assemblies between anilinium (Ph-NH 3 (+)) or adamantylammonium (AD-NH 3 (+)) and dibenzo[18]crown-6 (DB[18]crown-6) or meso-dicyclohexano[18]crown-6 (DCH[18]crown-6) were introduced into [Ni(dmit) 2] salts (dmit (2-) is 2-thioxo-1,3-dithiole-4,5-dithiolate). The ammonium moieties of Ph-NH 3 (+) and AD-NH 3 (+) cations were interacted through N-H (+) approximately O hydrogen bonding with the six oxygen atoms of crown ethers, forming 1:1 supramolecular rotator-stator structures. X-ray crystal-structure analyses revealed a jackknife-shaped conformation of DB[18]crown-6, in which two benzene rings were twisted along the same direction, in (Ph-NH 3 (+))(DB[18]crown-6)[Ni(dmit) 2] (-) ( 1) and (AD-NH 3 (+))(DB[18]crown-6)[Ni(dmit) 2] (-) ( 3), whereas the conformational flexibility of two dicyclohexyl rings was observed in (Ph-NH 3 (+))(DCH[18]crown-6)[Ni(dmit) 2] (-) ( 2) and (AD-NH 3 (+))(DCH[18]crown-6)[Ni(dmit) 2] (-) ( 4). Sufficient space for the molecular rotation of the adamantyl group was achieved in the crystals of salts 3 and 4, whereas the rotation of the phenyl group in salts 1 and 2 was rather restricted by the nearest neighboring molecules. The rotation of the adamantyl group in salts 3 and 4 was evidenced from the temperature-dependent wide-line (1)H NMR spectra, dielectric properties, and X-ray crystal structure analysis. ab initio calculations showed that the potential energy barriers for the rotations of adamantyl groups in salts 3 (Delta E approximately 18 kJmol (-1)) and 4 (Delta E approximately 15 kJmol (-1)) were similar to those of ethane ( approximately 12 kJmol (-1)) and butane (17-25 kJmol (-1)) around the C-C single bond, which were 1 order of magnitude smaller than those of phenyl groups in salts 1 (Delta E approximately 180 kJmol (-1)) and 2 (Delta E approximately 340 kJmol (-1)). 1D or 2D [Ni(dmit) 2] (-) anion arrangements were observed in the crystals according to the shape of crown ether derivatives. The 2D weak intermolecular interactions between [Ni(dmit) 2] (-) anions in salts 1 and 3 led to Curie-Weiss behavior with weak antiferromagnetic interaction, whereas 1D interactions through lateral sulfur-sulfur atomic contacts between [Ni(dmit) 2] (-) anions were observed in salts 2 and 4, whose magnetic behaviors were dictated by ferromagnetic (salt 2) and singlet-triplet (salt 4) intermolecular magnetic interactions, respectively.