Combinatorial optimization with 2-joins

A 2-join is an edge cutset that naturally appears in decomposition of several classes of graphs closed under taking induced subgraphs, such as perfect graphs and claw-free graphs. In this paper we construct combinatorial polynomial time algorithms for finding a maximum weighted clique, a maximum weighted stable set and an optimal coloring for a class of perfect graphs decomposable by 2-joins: the class of perfect graphs that do not have a balanced skew partition, a 2-join in the complement, nor a homogeneous pair. The techniques we develop are general enough to be easily applied to finding a maximum weighted stable set for another class of graphs known to be decomposable by 2-joins, namely the class of even-hole-free graphs that do not have a star cutset.We also give a simple class of graphs decomposable by 2-joins into bipartite graphs and line graphs, and for which finding a maximum stable set is NP-hard. This shows that having holes all of the same parity gives essential properties for the use of 2-joins in computing stable sets.     

Coloring Fuzzy Circular Interval Graphs

Computing the weighted coloring number of graphs is a classical topic in combinatorics and graph theory. Recently these problems have again attracted a lot of attention for the class of quasi-line graphs and more specifically fuzzy circular interval graphs.The problem is NP-complete for quasi-line graphs. For the subclass of fuzzy circular interval graphs however, one can compute the weighted coloring number in polynomial time using recent results of Chudnovsky and Ovetsky and of King and Reed. Whether one could actually compute an optimal weighted coloring of a fuzzy circular interval graph in polynomial time however was still open.We provide a combinatorial algorithm that computes weighted colorings and the weighted coloring number for fuzzy circular interval graphs efficiently. The algorithm reduces the problem to the case of circular interval graphs, then making use of an algorithm by Gijswijt to compute integer decompositions.     

Volume growth, spectrum and stochastic completeness of infinite graphs

We study the connections between volume growth, spectral properties and stochastic completeness of locally finite weighted graphs. For a class of graphs with a very weak spherical symmetry we give a condition which implies both stochastic incompleteness and discreteness of the spectrum. We then use these graphs to give some comparison results for both stochastic completeness and estimates on the bottom of the spectrum for general locally finite weighted graphs.     

A polynomial algorithm to find an independent set of maximum weight in a fork-free graph

The class of fork-free graphs is an extension of claw-free graphs and their subclass of line graphs. The first polynomial-time solution to the maximum weight independent set problem in the class of line graphs, which is equivalent to the maximum matching problem in general graphs, has been proposed by Edmonds in 1965 and then extended to the entire class of claw-free graphs by Minty in 1980. Recently, Alekseev proposed a solution for the larger class of fork-free graphs, but only for the unweighted version of the problem, i.e., finding an independent set of maximum cardinality. In the present paper, we describe the first polynomial-time algorithm to solve the problem for weighted fork-free graphs.     

Weighted coloring on planar, bipartite and split graphs: Complexity and approximation

We study complexity and approximation of min weighted node coloring in planar, bipartite and split graphs. We show that this problem is NP-hard in planar graphs, even if they are triangle-free and their maximum degree is bounded above by 4. Then, we prove that min weighted node coloring is NP-hard in P₈-free bipartite graphs, but polynomial for P₅-free bipartite graphs. We next focus on approximability in general bipartite graphs and improve earlier approximation results by giving approximation ratios matching inapproximability bounds. We next deal with min weighted edge coloring in bipartite graphs. We show that this problem remains strongly NP-hard, even in the case where the input graph is both cubic and planar. Furthermore, we provide an inapproximability bound of 7/6−ε, for any ε>0 and we give an approximation algorithm with the same ratio. Finally, we show that min weighted node coloring in split graphs can be solved by a polynomial time approximation scheme.     

Escape Rate of Markov Chains on Infinite Graphs

We study the escape rate of continuous time symmetric Markov chains associated with weighted graphs. The upper rate functions are given in terms of volume growth of the weighted graphs. For a class of symmetric birth and death processes, we obtain sharp upper rate functions.     

Optimal Parametric Search on Graphs of Bounded Tree-Width

We give linear-time algorithms for a class of parametric search problems on weighted graphs of bounded tree-width. We also discuss the implications of our results to approximate parametric search on planar graphs.     

Two local dissimilarity measures for weighted graphs with application to protein interaction networks

We extend the Czekanowski-Dice dissimilarity measure, classically used to cluster the vertices of unweighted graphs, to weighted ones. The first proposed formula corresponds to edges weighted by a probability of existence. The second one is adapted to edges weighted by intensity or strength. We show on simulated graphs that the class identification process is improved by computing weighted compared to unweighted edges. Finally, an application to a drosophila protein network illustrates the fact that using these new formulas improves the ’biological accuracy’ of partitioning.     

Perfect elimination orderings for symmetric matrices

We introduce a new class of structured symmetric matrices by extending the notion of perfect elimination ordering from graphs to weighted graphs or matrices. This offers a common framework capturing common vertex elimination orderings of monotone families of chordal graphs, Robinsonian matrices and ultrametrics. We give a structural characterization for matrices that admit perfect elimination orderings in terms of forbidden substructures generalizing chordless cycles in graphs.

     

Quantitative analysis of continuous weighted marked graphs

This paper deals with the computation of the asymptotic firing rate vector and the stationary marking of continuous weighted marked graphs under infinite servers semantics. The continuous weighted marked graphs are a particular class of continuous Petri net where each place has exactly one input and one output transition. First, we give an explicit formula to compute the asymptotic firing rate vector of transitions using the structure of the given net. Then, under the assumption that there exists only one critical circuit in the strongly connected continuous neutral weighted marked graphs, an original approach to compute the vector of stationary marking is presented. Finally, an application to a flexible manufacturing system is given.     

Extremal graph characterization from the upper bound of the Laplacian spectral radius of weighted graphs

We consider weighted graphs, where the edge weights are positive definite matrices. In this paper, we obtain two upper bounds on the spectral radius of the Laplacian matrix of weighted graphs and characterize graphs for which the bounds are attained. Moreover, we show that some known upper bounds on the Laplacian spectral radius of weighted and unweighted graphs can be deduced from our upper bounds.     

PTAS for the minimum weighted dominating set in growth bounded graphs

The minimum weighted dominating set (MWDS) problem is one of the classic NP-hard optimization problems in graph theory with applications in many fields such as wireless communication networks. MWDS in general graphs has been showed not to have polynomial-time constant-approximation if ${\mathcal{NP} \neq \mathcal{P}}$ . Recently, several polynomial-time constant-approximation SCHEMES have been designed for MWDS in unit disk graphs. In this paper, using the local neighborhood-based scheme technique, we present a PTAS for MWDS in polynomial growth bounded graphs with bounded degree constraint.     

The new upper bounds on the spectral radius of weighted graphs

Let us consider weighted graphs, where the weights of the edges are positive definite matrices. The eigenvalues of a weighted graph are the eigenvalues of its adjacency matrix and the spectral radius of a weighted graph is also the spectral radius of its adjacency matrix. In this paper, we obtain two upper bounds for the spectral radius of weighted graphs and compare with a known upper bound. We also characterize graphs for which the upper bounds are attained.     

Lower Bounds on the (Laplacian) Spectral Radius of Weighted Graphs

The weighted graphs, where the edge weights are positive numbers, are considered. The authors obtain some lower bounds on the spectral radius and the Laplacian spectral radius of weighted graphs, and characterize the graphs for which the bounds are attained. Moreover, some known lower bounds on the spectral radius and the Laplacian spectral radius of unweighted graphs can be deduced from the bounds.     

Bounded max-colorings of graphs

In a bounded max-coloring of a vertex/edge weighted graph, each color class is of cardinality at most b and of weight equal to the weight of the heaviest vertex/edge in this class. The bounded max-vertex/edge-coloring problems ask for such a coloring minimizing the sum of all color classes' weights. These problems generalize the well known max-coloring problems by taking into account the number of available resources (i.e., the cardinality of color classes) in practical applications. In this paper we present complexity results and approximation algorithms for the bounded max-coloring problems on general graphs, bipartite graphs and trees.     

Extremal graph characterization from the bounds of the spectral radius of weighted graphs

We consider weighted graphs, where the edge weights are positive definite matrices. The eigenvalues of a graph are the eigenvalues of its adjacency matrix. We obtain a lower bound and an upper bound on the spectral radius of the adjacency matrix of weighted graphs and characterize graphs for which the bounds are attained.     

赋权图中的路和圈

本文研究了赋权图中的最长路和最长圈,将关于非赋权图中最长路和最长圈的一些结果推广到赋权图上.     

Chip-Firing and Riemann-Roch Theory for Directed Graphs

Baker and Norine developed a graph theoretic analogue of the classical Riemann-Roch theorem. Amini and Manjunath extended their criteria to all full-dimensional lattices orthogonal to the all ones vector. We show that Amini and Manjunath?s criteria holds for all full-dimensional lattices orthogonal to some positive vector and study some combinatorial examples of such lattices. Two distinct generalizations of the chip-firing game of Baker and Norine to directed graphs are provided. We describe how the “row” chip-firing game is related to the sandpile model and the “column” chip-firing game is related to directed G-parking functions. We finish with a discussion of arithmetical graphs, introduced by Lorenzini, viewing them as a class of vertex weighted graphs whose Laplacian is orthogonal to a positive vector and describe how they may be viewed as a special class of unweighted strongly connected directed graphs.