New studies on the apparent allyl rotation in scorpion-like palladium complexes. The influence of non-directly bonded groups. X-ray molecular structures of [Pd(η-2-Me-C3H4)L]TfO, L=bpzmArOMe and bpz*mCy

New cationic 2-Me-allylpalladium complexes were prepared with the N,N-donor chelate ligands bis(pyrazol-1-yl)(R)methane (R=anisol-2-yl, bpzmArOMe; 2-hydroxyphenyl, bpzmArOH) and bis(3,5-dimethylpyrazol-1-yl)(R)methane (R=anisol-2-yl, bpz*mArOMe; cyclohexyl, bpz*mCy and ferrocenyl, bpz*mFc). The bpz′mR ligands adopt a rigid boat conformation after coordination to the Pd center and the R group is in the axial position of the metallacycle. The new complexes exhibit two isomeric forms in solution that differ in the relative orientation of the 2-Me-allyl group with respect to the bpz′mRPd fragment. The fluxional behavior of the new complexes, mainly in the context of the isomerization process, has been analyzed. Conclusions concerning the influence on this isomerization of the R group and the pyrazole substituents in positions 3 and 5 are discussed. The isomerization process was found to be affected by the presence of coordinating anions (Cl⁻) or by a change in the complex concentration. The molecular structures of the complexes [Pd(η³-2-Me-C₃H₄)(bpzmArOMe)]TfO and [Pd(η³-2-Me-C₃H₄)(bpz*mCy)]TfO have been determined by X-ray diffraction studies.     

Fluxional and aromatic behavior in small magic silicon clusters: a full ab initio study of Si(n), Si(n) (1-), Si(n) (2-), and Si(n) (1+), n=6, 10 clusters

The structural, electronic, vibrational, optical, magnetic, and aromatic characteristics of Si(n), Si(n) (1-), Si(n) (2-), and Si(n) (1+), clusters have been calculated very accurately with a variety of high level ab initio techniques. These calculations have been performed with the aim to clarify existing ambiguities in the literature and to bring up the fluxional and aromatic characteristics of these species. The fluxional behavior, according to earlier conjecture of the present author, could be connected to the magic property. In addition such behavior could also explain the existence of conflicting results. The ab initio techniques include quadratic configuration interaction, coupled cluster, and multireference second order perturbation theory, together with density functional theory ("static" and time dependent) with the hybrid B3LYP functional. Various high quality correlation-consistent basis sets, ranging from 2Z up to 5Z quality, were employed. It is demonstrated that Si(6) is fluxional, fluctuating around a symmetric D(4h) structure. Si(10) is also fluxional but to a lesser degree, in contrast to Si(10) (1-) anion which is highly fluxional. For both clusters, in full agreement with Wade's and Lipscomb's rules for deltahedral boranes, the corresponding dianions have higher symmetry (O(h) and D(4d), respectively) and lower energy than the neutral clusters. The aromatic behavior of Si(6) fits better to a mixed conflicting aromaticity picture. This type of aromatic and fluxional behavior has also been observed in stable "magic" carbon clusters as C(6) and carbon fullerenes such as C(20). The present results, which support possible connection of fluxional and magic properties, are in excellent agreement with experimental measurements of ionization energies, electron affinities, and vibrationally resolved photoelectron spectra.     

Synthesis and cytotoxicity studies of new 1,2,4-thiadiazole derivatives and their zinc complexes

A new polyfunctional ligand of the thiadiazole family was synthesized. Cytotoxic properties with respect to leukemic cell lines, radiation stability, predicted permeability through the blood–brain barrier and cardiotoxicity of the new ligand and its precursor were determined. New zinc complexes with N-{2-[5-(3-chloro-4-methylphenylamino)-1,2,4-thiadiazol-3-yl]-1-methylethyl}-N-(2,2,6,6-tetramethylpiperidin-4-yl)-amine as the ligand have been obtained.     

Structural properties of the trimetallic acetylide complex [{Ru(CO)2(η5C5H5)}3(η1:η1:η2:-CC)]+

The purpose of this Note is the study of the structure and fluxional behavior of the complex [{Ru(CO)₂(η⁵C₅H₅)}₃(η¹:η¹:η²:-CC)]⁺, using density functional methods. The molecular geometry of this complex will be optimized, the transition state (TS) of the fluxional process will be determined and the origin of the energy barrier will be analyzed.     

Trishomocyclopropenylium Cations. Structure, Stability, Magnetic Properties, and Rearrangement Possibilities

Potentially trishomoaromatic cations possessing the 6-X-bicyclo[3.1.0]hex-3-yl (X = CH(2), BH, NH, O) or bicyclo[3.2.0]hept-3-yl unit have been investigated at the Hartree-Fock, second-order, third-order, and fourth-order (single, double, quadruple excitations) M?ller-Plesset perturbation level employing the 6-31G(d) basis set. IGLO/6-31G(d) chemical shift calculations have been carried out at optimized geometries. Through-space interactions between the symmetric Walsh orbital of the three-membered ring and ppi(C3) orbital have been analyzed as a function of orbital energies and orbital overlap. The best indicators for trishomoaromaticity are NMR chemical shifts and magnetic susceptibility. There is a simple relationship between the conformation of the trishomocyclopropenylium cation, its charge distribution, and delta(13)C3, which can be used to determine the conformation or the C1C3 interaction distance from NMR measurements. Trishomocyclopropylium cations investigated can rearrange to an envelope form of higher energy where the height of the inversion barrier and the chair-envelope energy difference are a measure for the homoaromatic stabilization energy. The bicyclo[3.1.0]hex-3-yl cation in its envelope form can rearrange with a barrier of just 1 kcal/mol to the bicyclo[3.1.0]hept-2-yl cation. In the case of the bicyclo[3.2.0]hept-3-yl cation, there exists just the envelope form, which can rearrange to a ethano-bridged center-protonated spirocyclopentyl cation. The later cation should be an interesting target of chemical synthesis since it contains a pentacoordinated carbon atom and possesses unusual properties.     

Strain-induced substitutional lability in a Ru(II) complex of a hypodentate polypyridine ligand

The ruthenium(II) complex of heptadentate N,N,N',N'-tetrakis(2-pyridylmethyl)-2,6-bis(aminomethyl)pyridine (tpap) was isolated as the hexafluorophosphate complex Ru(tpap)(PF6)2. The crystal structure has been determined for the triflate salt Ru(tpap)(CF3SO3)2.2H2O, which crystallizes in the monoclinic space group P2(1)/n. The structure was refined to a final R value of 0.0549 for 5894 observed reflections. The heptadentate ligand coordinates with six nitrogens, i.e. with two tertiary nitrogens and four pyridine nitrogens, one of the pyridines remaining un-coordinated. The resulting structure is significantly distorted from octahedral geometry with an equatorial Nsp3-Ru-Npyridine angle of 120 degrees. The consequence of the above steric strain is a labilization of the system and fluxional behaviour involving exchange between equatorially coordinated and non-coordinated pyridines has been observed by 1H NMR for Ru(tpap)(PF6)2 in d6-acetone solution. The activation parameters of DeltaG(not equal to 298) = 53 kJ mol(-1), DeltaH(not equal) = 56 +/- 1 kJ mol(-1) and DeltaS(not equal) = -10 +/- 3 J mol(-1) K(-1) were determined on the basis of NMR experiments. In addition electronic structure calculations applying density functional theory (DFT) have been performed in order to identify a transition state and to estimate the activation barrier. On the basis of NMR and DFT results the mechanism of isoexchange involving a hepta-coordinated intermediate has been proposed.     

Five different fluxional processes in polyfluorophenyl palladium(II) complexes with 2,4,6-tris(3,5-dimethylpyrazol-1-yl)-1,3,5-triazine. The driving effect of the solvent

The polydentate N-donor ligand 2,4,6-tris(3,5-dimethylpyrazol-1-yl)-1,3,5-triazine (Me(2)-TpzT) has been used to synthesize the new palladium derivatives Pd(R)(2)(Me(2)-TpzT), R = C(6)F(5), 1; R = m-C(6)ClF(4), 2. In the case of complex 2, four different atropisomers have been detected at low temperature. The new complexes exhibit a rich dynamic behavior, including three metallotropic processes (metal-hurdling, 1,4-metallotropic shifts, and an intermolecular process) and two processes involving restricted rotation of aromatic rings (the polyfluorophenyl groups and the uncoordinated pyrazole group adjacent to the metal fragment). The fluxional behavior has been studied by (1)H and (19)F NMR spectroscopy using variable temperature NMR studies and (1)H,(1)H and (19)F,(19)F EXSY experiments. The study of solutions of 2 in 1,1',2,2'-tetrachloroethane-d(2) gave the following order for the free energy of activation: pyrazole rotation < 1,4-metallotropic shift < intermolecular exchange < polyfluorophenyl rotation. The process of metal hurdling was not found in this solvent. However, in acetone-d(6) such a process was detected and was found to be of lower energy than the 1,4-metallotropic shift. In dilute acetone-d(6) or 1,1',2,2'-tetrachloroethane-d(2 )()solutions, the intermolecular process was not observed. Conclusions concerning the different mechanisms have been deduced from the data obtained.     

Comprehensive Characterization of the Self-Folding Cavitand Dynamics

The conformational equilibria and guest exchange process of a resorcin[4]arene derived self-folding cavitand receptor have been characterized in detail by molecular dynamics simulations (MD) and ¹H EXSY NMR experiments. A multi-timescale strategy for exploring the fluxional behaviour of this system has been constructed, exploiting conventional MD and accelerated MD (aMD) techniques. The use of aMD allows the reconstruction of the folding/unfolding process of the receptor by sampling high-energy barrier processes unattainable by conventional MD simulations. We obtained MD trajectories sampling events occurring at different timescales from ns to s: 1) rearrangement of the directional hydrogen bond seam stabilizing the receptor, 2) folding/unfolding of the structure transiting partially open intermediates, and 3) guest departure from different folding stages. Most remarkably, reweighing of the biased aMD simulations provided kinetic barriers that are in very good agreement with those determined experimentally by ¹H NMR. These results constitute the first comprehensive characterization of the complex dynamic features of cavitand receptors. Our approach emerges as a valuable rational design tool for synthetic host-guest systems     

Titanium and niobium imido complexes stabilized by heteroscorpionate ligands

The reaction of [Ti(NR)Cl(2)(py)(3)](R = (t)Bu, p-tolyl, 2,6-C(6)H(3)(i)Pr(2)) with [{Li(bdmpza)(H(2)O)}(4)][bdmpza = bis(3,5-dimethylpyrazol-1-yl)acetate] and [{Li(bdmpzdta)(H(2)O)}(4)][bdmpzdta = bis(3,5-dimethylpyrazol-1-yl)dithioacetate] affords the corresponding complexes [Ti(NR)Cl(kappa(3)-bdmpzx)(py)](x = a, R = (t)Bu 1, p-tolyl 2, 2,6-C(6)H(3)(i)Pr(2) 3; x = dta, R =(t)Bu 4, p-tolyl , 2,6-C(6)H(3)(i)Pr(2) 6), which are the first examples of imido Group 4 complexes stabilized by heteroscorpionate ligands. The solid-state X-ray crystal structure of 1 has been determined. The titanium centre is six-coordinate with three fac-sites occupied by the heteroscorpionate ligand and the remainder of the coordination sphere being completed by chloride, imido and pyridine ligands. The complexes are 1-6 fluxional at room temperature. The pyridine ortho- and meta-proton resonances show evidence of dynamic behaviour for this ligand and variable-temperature NMR studies were carried out in order to study their dynamic behaviour in solution. The complexes [Nb(NR)Cl(3)(py)(2)](R = (t)Bu, p-tolyl, 2,6-C(6)H(3)(i)Pr(2)) reacted with [{Li(bdmpza)(H(2)O)}(4)] and (Hbdmpze)[bdmpze = 2,2-bis(3,5-dimethylpyrazol-1-yl)ethoxide], the latter with prior addition of (n)BuLi, to give the complexes [Nb(NR)Cl(2)(kappa(3)-bdmpzx)](x = a, R =(t)Bu 7, p-tolyl 8, 2,6-C(6)H(3)(i)Pr(2) 9; x = e, R = (t)Bu 10, p-tolyl 11, 2,6-C(6)H(3)(i)Pr(2)) 12 and these are the first examples of imido Group 5 complexes with heteroscorpionate ligands. The structures of these complexes have been determined by spectroscopic methods.     

Conformational studies by dynamic NMR. 86. Structure, stereodynamics, and cryogenic enantioseparation of the stereolabile isomers of o-dinaphthylphenyl derivatives

Static and dynamic stereochemistry of the hydrocarbon comprising a phenyl ring bearing two alpha-naphthyl substituents in the ortho positions, i.e., 1,2-di-(4-methyl-naphth-1-yl)-benzene 1, has been studied by a combination of variable temperature NMR, cryogenic HPLC, and MM calculations. Whereas in solution both syn (meso) and anti (chiral) forms were observed and the corresponding interconversion barrier was determined (Delta G(++) = 19.5 kcal mol(-1)), only the diastereoisomer anti was found to be present in the crystalline state (X-ray diffraction). When the molecule is rendered asymmetric by introduction of a nitro group in the phenyl ring as in 1,2-di-(4-methyl-naphth-1-yl)-4-nitrobenzene 2, the chiral syn and anti diastereoisomers are simultaneously present both in solution and in the solid state, albeit in different proportions. Cryogenic chromatography on a HPLC chiral stationary phase at 20 degrees C allowed the stereolabile diastereoisomers and the corresponding enantiomers to be separated.     

An oscillating C2(2-) unit inside a copper rectangle

[Cu4(mu-dppm)4(mu4-eta1,eta2-C[triple bond]C-)]2+ has been shown by 31P and 1H NMR studies to undergo two fluxional processes in solution, the oscillation of the C[triple bond]C2- unit inside the copper rectangle and the flipping of the diphosphines, and this has been supported by DFT(B3LYP) calculations.     

Analytical chemistry of synthetic routes to psychoactive tryptamines. Part I. Characterisation of the Speeter and Anthony synthetic route to 5-methoxy-N,N-diisopropyltryptamine using ESI-MS-MS and ESI-TOF-MS

5-Methoxy-N,N-diisopropyltryptamine (5-MeO-DIPT), a new psychoactive tryptamine derivative, has been synthesised by the Speeter and Anthony procedure. This synthetic route was characterised by ESI-MS-MS, ESI-TOF-MS and NMR. Side products have been identified as 3-(2-N,N-diisopropylamino-ethyl)-1H-indol-5-ol (5), 2-N,N-diisopropylamino-1-(5-methoxy-1H-indol-3-yl)-ethanol (6), 2-(5-methoxy-1H-indol-3-yl)-ethanol (7) and 2-N,N-diisopropylamino-1-(5-methoxy-1H-indol-3-yl)-ethanone (8).     

Nickel-catalyzed, cascade cycloadditions of 1-ethynyl-8-halonaphthalenes with nitriles: synthesis, structure, and physical properties of new pyrroloarenes

The reaction of 1-ethynyl-8-halonaphthalenes 1 with nitriles in the presence of the catalytic system [NiBr(2)(dppe)]/Zn (dppe=1,2-bis(diphenylphosphino)ethane) is found to produce unusual pyrroloarenes 2. The carbon-nitrogen triple bond in nitrile is activated twice, and five new bonds are formed in a one-pot transformation, which causes a pyrrole and two six-membered rings to be generated simultaneously. The scope and limitations of this reaction are examined. Similarly, alkyl-bridged diynes also furnish the corresponding polycycles. Diaryl-substituted cycloadducts 2 (R(1)=Ar) are fluxional, because of the restriction in rotation of the aryl groups. The rotational barrier is studied by performing (1)H NMR experiments at various temperatures. The structures of several compounds are determined by X-ray crystallographic analysis. The photophysical and electrochemical properties of the pyrroloarenes are also investigated.     

ON–OFF Fluorescent Imidazole Derivative for Sensitive and Selective Detection of Copper(II) Ions

Russian Journal of Organic Chemistry - A novel multichromophoric hybrid compound, 2-[1-(4-tert-butylphenyl)-4,5-diphenyl-1H-imidazol-2-yl]-6-(pyren-1-yl)quinoline (TDIPQ) has been synthesized as an...     

The role of achiral pyrazolidinone templates in enantioselective Diels-Alder reactions: scope, limitations, and conformational insights

We have evaluated the role of achiral pyrazolidinone templates in conjunction with chiral Lewis acids in room temperature, enantioselective Diels-Alder cycloadditions. The role of the fluxional N(1) substituent was examined, with the bulky 1-naphthylmethyl group providing enantioselectivities up to 99% ee, while templates with smaller fluxional groups gave lower selectivities. High selectivities were also observed in reactions of 7d with chiral Lewis acids derived from relatively small chiral ligands, suggesting the pyrazolidinone templates are capable of relaying stereochemical information from the ligand to the reaction center. Lewis acids capable of adapting square planar geometries, such as Cu(OTf)2, Cu(ClO4)2, and Pd(ClO4)2, were found to be particularly effective at providing high selectivities. Additionally, substitution at the C-5 position of the pyrazolidinone templates has been shown to be critical for optimal selectivity. Reactions of the optimal pyrazolidinone appended with a number of common dienophiles and various dienes demonstrate the utility of this achiral template. Furthermore, catalytic loadings could be lowered to 2.5 mol % with essentially no loss in selectivity. Pi-Pi interactions were evaluated as a means to explain the unusually high selectivity observed at room temperature. Finally, non-C2-symmetric ligands were employed as a test to determine if chiral relay was operative.     

Walking metals in d8···d8 hetero-bimetallic complexes: an original dynamic phenomenon

In the course of our investigations on polymetallic complexes derived from 1,3-bis(thiophosphinoyl)indene (Ind(Ph(2)P=S)(2)), we observed original fluxional behavior and report herein a joint experimental/computational study of this dynamic process. Starting from the indenylidene chloropalladate species [Pd{Ind(Ph(2) P=S)(2)}Cl](-) (1), the new Pd(II)···Rh(I) hetero-bimetallic pincer complex [PdCl{Ind(Ph(2) P=S)(2)}Rh(nbd)] (2; nbd=2,5-norbornadiene) was prepared. X-ray crystallography and DFT calculations substantiate the presence of a d(8)···d(8) interaction. According to multinuclear variable-temperature NMR spectroscopic experiments, the pendant {Rh(nbd)} fragment of 2 readily shifts in solution at room temperature between the two edges of the SCS tridentate ligand. To assess the role of the pincer-based polymetallic structure on this fluxional behavior, the related monometallic Rh complex [Rh{IndH(Ph(2) P=S)(2)}(nbd)] (3) was prepared. No evidence for a metal shift was observed in that case, even at high temperature, thus indicating that inplane pincer coordination to the Pd center plays a crucial role. The previously described Pd(II)···Ir(I) bimetallic complex 4 exhibited fluxional behavior in solution, but with a significantly higher activation barrier than 2. This finding demonstrates the generality of this metal-shift process and the strong influence of the involved metal centers on the associated activation barrier. DFT calculations were performed to shed light onto the mechanism of such metal-shift processes and to identify the factors that influence the associated activation barriers. Significantly different pathways were found for bimetallic complexes 2 and 4 on one hand and the monometallic complex 3 on the other hand. The corresponding activation barriers predicted computationally are in very good agreement with the experimental observations.     

The structure of arachno-[B6H11]-, at -25 degrees C in (CD3)2O,is resolved via the ab initio/IGLO-GIAO/NMR procedure

The arachno-[B6H11]- solution structure at -25 degrees C was clarified as fluxional compound 2 by applying the ab initio/IGLO/NMR method. The anion 2 can be derived from arachno-B6H12, 1, by the removal of the B2/B3 bridging hydrogen (2). No minimum on the potential energy surface could be found for an asymmetric complex, a, between [B5H8]- and BH3, which had been proposed originally. A Cs-symmetric [mu-(BH3)B5H8]- complex, A, only 3.2 kcal mol-1 higher in energy than 2, is the intermediate in the fluxional rearrangement observed on the NMR time scale. The transition structure [D] connecting 2 (Erel = 0.0) and A (Erel = 3.2) has a relative energy of 9.7 kcal mol-1. The elimination of both a and A as "most stable structure" candidates of arachno-[B6H11]- reinforces the early geometrical bonding systematics for boranes and carboranes.     

Gold derivatives of scorpionates: comparison with the other coinage metal poly(pyrazolyl)borate analogues

Gold derivatives [Au(Tpx)(PR3)](Tpx = Tp, hydrotris(pyrazol-1-yl)borate or Tp*, hydrotris(3,5-dimethylpyrazol-1-yl)borate; R = Ph or tBu) and [Au(pzTp)(PR3)x](pzTp = tetrakis(pyrazol-1-yl)borate, x = 1 or 2, R = Ph or tBu) have been synthesised and characterized both in solution (1H- and 31P[1H]-NMR) and in the solid state (IR, single crystal X-ray structure analysis, 31P CPMAS). 31P [1H] NMR solution data suggest greater stability of the tetrakis(pyrazolyl)borate relative to those of tris(pyrazolyl)borate. All compounds are fluxional at room temperature. In order to compare [Au(Tp*)(PPh3)] with analogous coinage metal adducts we have synthesized and structurally characterized [Cu(Tp*)(PPh3)] x PPh3 and [Ag(Tp*)(PPh3)] x 2MeCN. In [Au(Tp*)(PPh3)] the gold atom adopts a distorted tetrahedral geometry with 2.181(5) and 2.37(2) angstroms (cf. 2.166(6), 2.098(1) in [Cu(Tp*)PPh3], 2.156(2), 2.075(7) in [Cu(Tp*)(PPh3)] x PPh3; and in [Ag(Tp*)PPh3] x MeCN 2.347(12), 2.35(5) angstroms). There are three independent [Au(Tp*)(PPh3)] molecules in the asymmetric unit of the structure with their PAu...B axes lying on the cell diagonal of a cubic P213 cell, two with the same chirality aligned opposed in direction to the third which is of opposite chirality. A number of Cu, Ag and Au complexes containing scorpionate ligands have also been investigated by 31P cross-polarization magic-angle-spinning (CPMAS) NMR spectroscopy.     

Syntheses,structures, and fluxionality of blue luminescent zinc(II) complexes: Zn(2,2',2"-tpa)Cl2, Zn(2,2',2"-tpa)2(O2CCF3)2, and Zn(2,2',3"-tpa)4(O2CCF3)2 (tpa = tripyridylamine)

Three novel Zn(II) complexes containing either 2,2',2"-tripyridylamine (2,2',2"-tpa) or 2,2',3"-tripyridylamine (2,2',3"-tpa) have been synthesized and structurally characterized. Compound 1, Zn(2,2',2"-tpa)Cl2, has a tetrahedral geometry while compounds 2, Zn(2,2',2"-tpa)2(O2CCF3)2, and 3, Zn(2,2',3"-tpa)4(O2CCF3)2, have an octahedral geometry. The 2,2',2"-tpa ligand in 1 and 2 functions as a bidentate ligand, chelating to the zinc center, while the 2,2",3"-tpa ligand in 3 functions as a terminal ligand, binding to the zinc center through the 3-pyridyl nitrogen atom. All three compounds emit a blue color in solution and in the solid state. The emission maxima for the three compounds in solution are at lambda = 422, 426, and 432 nm, respectively. The blue luminescence of the complexes is due to a pi *-->pi transition of the tpa ligand as established by an ab initio calculation on the free ligand 2,2',2"-tpa and complex 1. Compounds 1 and 2 are fluxional in solution owing to an exchange process between the coordinate and noncoordinate 2-pyridyl rings of the 2,2',2"-tpa ligand. Compound 2 is also fluxional owing to a cis-trans isomerization process, as determined by variable-temperature 1H NMR spectroscopic analysis.     

The synthesis and spontaneous resolution of 2-(2-thioxothiazolidin-3-yl)thiazole

A single crystalline enantiomer of 2-(2-thioxothiazolidin-3-yl)thiazole 5 has been isolated as the major product of the pyrolysis of 3-(2-thiazolin-2-yl)thiazolidine-2-thione 3 (n = 1); the latter isolated as the sole product of the reaction between thiazolidine-2-thione 2 (n = 1) and diethyl azodicarboxylate (DEAD) in benzene.