Embedding and Positioning of Two FeII4L4 Cages in Supramolecular Tripeptide Gels for Selective Chemical Segregation

An unreported d,l ‐tripeptide self‐assembled into gels that embedded Fe^II₄L₄ metal–organic cages to form materials that were characterized by TEM, EDX, Raman spectroscopy, rheometry, UV/Vis and NMR spectroscopy, and circular dichroism. The cage type and concentration modulated gel viscoelasticity, and thus the diffusion rate of molecular guests through the nanostructured matrix, as gauged by ¹⁹F and ¹H NMR spectroscopy. When two different cages were added to spatially separated gel layers, the gel–cage composite material enabled the spatial segregation of a mixture of guests that diffused into the gel. Each cage selectively encapsulated its preferred guest during diffusion. We thus present a new strategy for using nested supramolecular interactions to enable the separation of small molecules.     

Molecular dynamics-based approach to study the anisotropic self-diffusion of molecules in porous materials with multiple cage types: application to H2 in losod

The anisotropic self-diffusion of molecular hydrogen in the multiple cage clathrasil losod (LOS) is modeled by means of molecular dynamics (MD) simulations of up to 1 micros for the temperature range 900-1200 K while treating the framework as fully flexible. The LOS diffusion tensor is calculated employing an analytical method based on hopping rates. The diffusion in the c-direction of the unit cell is found to be approximately two times more rapid than in the a- and the b-directions, a characteristic of importance for the application of LOS as a membrane. The overall diffusion is based on five different hop types for which the individual hopping rates and diffusion barriers are calculated separately. We show explicitly that the shape and volume of the cages have a significant effect on the hopping rates and further that even small deformations of the circular Si6O6 apertures have a large influence on the energetic barrier for hydrogen diffusion. Compared to the single cage clathrasils dodecasil 3C (MTN) and sodalite (SOD), LOS has a lower diffusion rate. However, from a technical point of view this rate (at 573 K) is still fast enough for LOS to be interesting as a size-selective membrane or as a hydrogen-adsorption medium.     

Correlation of Activation Energies of Gas Diffusivity and Local Matrix Mobility in Polycarbonate/POSS Nanocomposites

According to basic phenomenological models describing the solution‐diffusion based mechanism of penetrant diffusion in dense polymers, a connection between the diffusive transport of gas molecules in a polymeric matrix and the molecular mobility of that matrix on a certain length scale is, in principle, established for a long time. However, experimental data directly showing this correlation are rare. The investigation of a series of nanocomposites based on a polyhedral oligomeric silsesquioxane (POSS) and a polycarbonate matrix allows a systematic change of the molecular mobility on a local length scale (β‐relaxation) and of the corresponding activation energy E_A, both determined by broadband dielectric spectroscopy. Independently, activation energies of penetrant diffusion (E_D) of these nanocomposites were determined for N₂, O₂, CO₂, and CH₄ and a clear linear correlation between the two activation energies was established for the first time. © 2013 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2013 , 51, 1593–1597     

Theoretical Investigation of the Fusion Process of Mono-Cages to Tri-Cages with CH4/C2H6 Guest Molecules in sI Hydrates

Owing to a stable and porous cage structure, natural gas hydrates can store abundant methane and serve as a potentially natural gas resource. However, the microscopic mechanism of how hydrate crystalline grows has not been fully explored, especially for the structure containing different guest molecules. Hence, we adopt density functional theory (DFT) to investigate the fusion process of structure I hydrates with CH₄/C₂H₆ guest molecules from mono-cages to triple-cages. We find that the volume of guest molecules affects the stabilities of large (5¹²6², L) and small (5¹², s) cages, which are prone to capture C₂H₆ and CH₄, respectively. Mixed double cages (small cage and large cage) with the mixed guest molecules have the highest stability and fusion energy. The triangular triple cages exhibit superior stability because of the three shared faces, and the triangular mixed triple cages (large-small-large) structure with the mixed guest molecules shows the highest stability and fusion energy in the triple-cage fusion process. These results can provide theoretical insights into the growth mechanism of hydrates with other mono/mixed guest molecules for further development and application of these substances.     

2H and13C NMR study of guest molecule orientation in clathrate hydrates

At relatively high temperatures (200–270K), clathrate hydrate cages achieve their full crystallographic symmetry because of time averaging of different cage configurations which exist because of disorder in the water molecule orientations. The average orientation of guest molecules in the cages can be obtained from the NMR spectrum, in case of spin 1/2 nuclei from the nuclear shielding tensor, in case of spin 1 nuclei from the quadrupole coupling tensor. Guest molecules studied include carbon dioxide, carbonyl sulphide, methyl-d₃ fluoride, methyl-d₃ chloride, methyl-d₃ bromide, ethane-d₆, acetylene-d₂ in the structure I hydrates, and methyl-d₃ iodide in the structure II hydrate.For the slightly flattened large cage of structure I hydrate, the guest molecules rotate so that the plane which contains the long axis of the molecule is confined to be nearer to the equatorial plane of the cage than the axial regions.Since the structure II large cage has tetrahedral symmetry on time average, it exerts no orienting effect on guest molecules.NRCC no. 32722.     

PEEK–WC-Based Mixed Matrix Membranes Containing Polyimine Cages for Gas Separation

Membrane-based processes are taking a more and more prominent position in the search for sustainable and energy-efficient gas separation applications. It is known that the separation performance of pure polymers may significantly be improved by the dispersion of suitable filler materials in the polymer matrix, to produce so-called mixed matrix membranes. In the present work, four different organic cages were dispersed in the poly(ether ether ketone) with cardo group, PEEK-WC. The m-xylyl imine and furanyl imine-based fillers yielded mechanically robust and selective films after silicone coating. Instead, poor dispersion of p-xylyl imine and diphenyl imine cages did not allow the formation of selective films. The H₂, He, O₂, N₂, CH₄, and CO₂ pure gas permeability of the neat polymer and the MMMs were measured, and the effect of filler was compared with the maximum limits expected for infinitely permeable and impermeable fillers, according to the Maxwell model. Time lag measurements allowed the calculation of the diffusion coefficient and demonstrated that 20 wt % of furanyl imine cage strongly increased the diffusion coefficient of the bulkier gases and decreased the diffusion selectivity, whereas the m-xylyl imine cage slightly increased the diffusion coefficient and improved the size-selectivity. The performance and properties of the membranes were discussed in relation to their composition and morphology.     

Phthalocyanine‐Based Organometallic Nanocages: Properties and Gas Storage

Phthalocyanine (Pc) molecules are well‐known flexible structural units for 1D nanotubes and 2D nanosheets. First‐principles calculations combined with grand canonical Monte Carlo simulations are used to obtain the geometries, electronic structures, optical properties, and hydrogen‐storage capacities of nanocages consisting of six Pc molecules with six Mg or Ca atoms. The primitive Pc cage has T_h symmetry with twofold degeneracy in the highest occupied molecular orbital (HOMO), and threefold degeneracy in the lowest unoccupied molecular orbital (LUMO); the corresponding HOMO–LUMO gap is found to be 0.97 eV. The MgPc and CaPc cages have O_h symmetry with a HOMO–LUMO gap of 1.24 and 1.13 eV, respectively. Optical absorption spectra suggest that the Pc‐based cages can absorb infrared light, which is different from the visible‐light absorption in Pc molecules. We further show that the excess uptake of hydrogen on MgPc and CaPc cages at 298 K and 100 bar (1 bar=0.1 MPa) is about 3.49 and 4.74 wt %, respectively. The present study provides new insight into Pc‐based nanostructures with potential applications.     

Ionic impurities in nematic liquid crystal displays

This paper shows that the dielectric anisotropy of conductivity in cells composed of nematic liquid crystal E7 (NLC-E7) is related to the fact that the diffusion constant (D) is greater in a cell with homeotropic alignment than in one with homogeneous alignment (D _∥ > D _⊥). This behaviour can be understood by the study of the dielectric properties of the NLC based on the ionic hopping behaviour and on the analysis of the electrical conductivity in relation to the voltage applied.     

Determination of NMR Lineshape Anisotropy of Guest Molecules within Inclusion Complexes from Molecular Dynamics Simulations

Nonspherical cages in inclusion compounds can result in non‐uniform motion of guest species in these cages and anisotropic lineshapes in NMR spectra of the guest. Herein, we develop a methodology to calculate lineshape anisotropy of guest species in cages based on molecular dynamics simulations of the inclusion compound. The methodology is valid for guest atoms with spin 1/2 nuclei and does not depend on the temperature and type of inclusion compound or guest species studied. As an example, the nonspherical shape of the structure I (sI) clathrate hydrate large cages leads to preferential alignment of linear CO₂ molecules in directions parallel to the two hexagonal faces of the cages. The angular distribution of the CO₂ guests in terms of a polar angle θ and azimuth angle ? and small amplitude vibrational motions in the large cage are characterized by molecular dynamics simulations at different temperatures in the stability range of the CO₂ sI clathrate. The experimental ¹³C NMR lineshapes of CO₂ guests in the large cages show a reversal of the skew between the low temperature (77 K) and the high temperature (238 K) limits of the stability of the clathrate. We determine the angular distributions of the guests in the cages by classical MD simulations of the sI clathrate and calculate the ¹³C NMR lineshapes over a range of temperatures. Good agreement between experimental lineshapes and calculated lineshapes is obtained. No assumptions regarding the nature of the guest motions in the cages are required.     

Rotation and diffusion of H2 in hydrogen-ice clathrate by 1H NMR

A recently reported hydrogen-ice clathrate carries up to four H(2) in each large cage and one H(2) in each small cage. We report pulsed proton NMR line shape measurements on H(2)-D(2)O clathrate formed at 1500 bar and 250 K. The behavior of the two-pulse spin-echo amplitude with respect to the nutation angle of the refocusing pulse shows that intramolecular dipolar broadening, modulated by H(2) molecular reorientations, dominates the line width of the ortho-H(2). Dipolar interaction between H(2) guests and host D atoms explains the echo variation with the relative phases of the pulses. From 12 to 120 K, the line width varies as 1/T, demonstrating that the three sublevels of J = 1 are split by a constant energy, epsilon. The splitting arises from distortion in the otherwise high-symmetry cages from frozen-out D(2)O orientational disorder. Above 120 K, further line-narrowing signals the onset of H(2) diffusion from cage to cage. At the lowest temperature, 1.9 K, the spectrum has Pake powder doublet-like features; the doublet is not fully developed, indicating a broad distribution of order parameters and energies epsilon.     

Abnormal Thermal Expansion of Clathrate Hydrates Induced by Asymmetric Guest Molecules

We investigated for the first time the abnormal thermal expansion induced by an asymmetric guest structure using high‐resolution neutron powder diffraction. Three dihydrogen molecules (H₂, D₂, and HD) were tested to explore the guest dynamics and thermal behavior of hydrogen‐doped clathrate hydrates. We confirmed the restricted spatial distribution and doughnut‐like motion of the HD guest in the center of anisotropic sII‐S (sII‐S=small cages of structure II hydrates). However, we failed to observe a mass‐dependent relationship when comparing D₂ with HD. The use of asymmetric guest molecules can significantly contribute to tuning the cage dimension and thus can improve the stable inclusion of small gaseous molecules in confined cages.     

Growth mechanism of a gas clathrate hydrate from a dilute aqueous gas solution: a molecular dynamics simulation of a three-phase system

A molecular dynamics simulation of a three-phase system including a gas clathrate, liquid water, and a gas was carried out at 298 K and high pressure in order to investigate the growth mechanism of the clathrate from a dilute aqueous gas solution. The simulation indicated that the clathrate grew on interfaces between the clathrate and the liquid water, after transfer of the gas molecules from the gas phase to the interfaces. The results suggest a two-step process for growth: first, gas molecules are arranged at cage sites, and second, H(2)O molecules are ordered near the gas molecules. The results also suggest that only the H(2)O molecules, which are surrounded or sandwiched by the gas molecules, form the stable polygons that constitute the cages of the clathrate. In addition, the growth of the clathrate from a concentrated aqueous gas solution was also simulated, and the results suggested a growth mechanism in which many H(2)O and gas molecules correctively form the structure of the clathrate. The clathrate grown from the concentrated solution contained some empty cages, whereas the formation of empty cages was not observed during the growth from the dilute solution. The results obtained by both simulations are compared with the results of an experimental study, and the growth mechanism of the clathrate in a real system is discussed.     

A Design Criteria to Achieve Giant Ising-Type Anisotropy in CoII-Encapsulated Metallofullerenes

Discovery of permanent magnetisation in molecules just like in hard magnets decades ago led to the proposal of utilising these molecules for information storage devices and also as Q-bits in quantum computing. A significant breakthrough with a blocking temperature as high as 80 K has been recently reported for lanthanocene complexes. While enhancing the blocking temperature further remains one of the primary challenges, obtaining molecules that are suitable for the fabrication of the devices sets the bar very high in this area. Encouraged by the fact that our earlier predictions of potential single-molecule magnets (SMMs) in lanthanide-containing endohedral fullerenes have been verified, here we set out to undertake a comprehensive study on Co^II-ion-encapsulated fullerene as potential SMMs. To study this class of molecules, we have utilised an array of theoretical methods ranging from density functional to ab initio CASSCF/NEVPT2 methods for obtaining reliable estimate of zero-field splitting parameters D and E. Additionally, we have also employed, for the first time a combination of molecular dynamics based on DFT methods coupled with CASSCF/NEVPT2 methods to seek the role of conformational isomers in the relaxation of magnetisation. Particularly, we have studied, Co@C₂₈, Co@C₃₈ and Co@C₄₈ cages and their isomers as potential target molecules that could yield substantial magnetic anisotropy. Our calculations categorically reveal a very large Ising anisotropy in this class of molecules, with Co@C₄₈ cages predicted to yield D values as high as −127 cm⁻¹. Our calculations on the smaller cages reveal the free movement of Co^II ion inside the cage, leading to the likely scenario of faster relaxation of magnetisation. However, larger fullerene cages were found to solve this issue. Further models with incorporating units such as {CoOZn}, {CoScZnN} inside larger fullerenes yield axial zero-field splitting values as high as −200 cm⁻¹ with negligible E/D values. As these units represent a strong axiality coupled with a viable way to obtain air-stable low-coordinate Co^II complexes, this opens up a new paradigm in the search of SMMs in this class of molecules.     

Molecular dynamics of glucose in solution: a quasielastic neutron scattering study

The molecular dynamics of glucose dissolved in heavy water have been investigated at 280 K by the technique of quasielastic neutron scattering. The scattering was described by a dynamic structure factor that accounts for decoupled diffusive jumps and free rotational motions of the glucose molecules. With increasing glucose concentration, the diffusion constant decreases by a factor five and the time between jumps increases considerably. Our observations validate theoretical predictions concerning the impact of concentration on the environment of a glucose molecule and the formation of cages made by neighboring glucose molecules at higher concentrations.     

Dynamical cage behaviour and hydrogen migration in hydrogen and hydrogen-tetrahydrofuran clathrate hydrates

Classical equilibrium molecular dynamics simulations have been performed to investigate dynamical properties of cage radial breathing modes and intra- and inter-cage hydrogen migration in both pure hydrogen and mixed hydrogen-tetrahydrofuran sII hydrates at 0.05 kbar and up to 250 K. For the mixed H(2)-THF system in which there is single H(2) occupation of the small cage (labelled "1SC 1LC"), we find that no H(2) migration occurs, and this is also the case for pure H(2) hydrate with single small-cavity occupation and quadruple occupancy for large cages (dubbed "1SC 4LC"). However, for the more densely filled H(2)-THF and pure-H(2) systems, in which there is double H(2) occupation in the small cage (dubbed "2SC 1LC" and "2SC 4LC," respectively), there is an onset of inter-cage H(2) migration events from the small cages to neighbouring cavities at around 200 K, with an approximate Arrhenius temperature-dependence for the migration rate from 200 to 250 K. It was found that these "cage hopping" events are facilitated by temporary openings of pentagonal small-cage faces with the relaxation and reformation of key stabilising hydrogen bonds during and following passage. The cages remain essentially intact up to 250 K, save for transient hydrogen bond weakening and reformation during and after inter-cage hydrogen diffusion events in the 200-250 K range. The "breathing modes," or underlying frequencies governing the variation in the cavities' radii, exhibit a certain overlap with THF rattling motion in the case of large cavities, while there is some overlap of small cages' radial breathing modes with lattice acoustic modes.     

Photoinitiated polymerization of methacrylic monomers in a polystyrene matrix: Kinetic,mechanistic, and structural aspects

The kinetics and mechanism of the photoinitiated polymerization of tetrafunctional and difunctional methacrylic monomers [1,6‐hexanediol dimethacrylate (HDDMA) and 2‐ethylhexyl methacrylate (EHMA)] in a polystyrene (PS) matrix were studied. The aggregation state, vitreous or rubbery, of the monomer/matrix system and the intermolecular strength of attraction in the monomer/matrix and growing macroradical/matrix systems are the principal factors influencing the kinetics and mechanism. For the PS/HDDMA system, where a relatively high intermolecular force of attraction between monomer and matrix and between growing macroradical and matrix occurs, a reaction‐diffusion mechanism takes place at low monomer concentrations (<30–40%) from the beginning of the polymerization. For the PS/EHMA system, which presents low intermolecular attraction between monomer and matrix and between growing macroradical and matrix, the reaction‐diffusion termination is not clear, and a combination of reaction‐diffusion and diffusion‐controlled mechanisms explains better the polymerization for monomer concentrations below 30–40%. For both systems, for which a change from a vitreous state to a rubbery state occurs when the monomer concentration changes from 10 to 20%, the intrinsic reactivity and k_p/k_t^1/2 ratio (where k_p is the propagation kinetic constant and k_t is the termination kinetic constant) increase as a result of a greater mobility of the monomer in the matrix (a greater k_p value). The PS matrix participates in the polymerization process through the formation of benzylic radical, which is bonded to some extent by radical–radical coupling with the growing methacrylic radica, producing grafting on the PS matrix. © 2001 John Wiley & Sons, Inc. J Polym Sci Part A: Polym Chem 39: 2049–2057, 2001     

Creating Coordination‐Based Cavities in a Multiresponsive Supramolecular Gel

Creating cavities in varying levels, from molecular containers to macroscopic materials of porosity, have long been motivated for biomimetic or practical applications. Herein, we report an assembly approach to multiresponsive supramolecular gels by integrating photochromic metal–organic cages as predefined building units into the supramolecular gel skeleton, providing a new approach to create cavities in gels. Formation of discrete O‐Pd₂L₄ cages is driven by coordination between Pd²⁺ and a photochromic dithienylethene bispyridine ligand (O‐PyFDTE). In the presence of suitable solvents (DMSO or MeCN/DMSO), the O‐Pd₂L₄ cage molecules aggregate to form nanoparticles, which are further interconnected through supramolecular interactions to form a three‐dimensional (3D) gel matrix to trap a large amount of solvent molecules. Light‐induced phase and structural transformations readily occur owing to the reversible photochromic open‐ring/closed‐ring isomeric conversion of the cage units upon UV/visible light radiation. Furthermore, such Pd₂L₄ cage‐based gels show multiple reversible gel–solution transitions when thermal‐, photo‐, or mechanical stimuli are applied. Such supramolecular gels consisting of porous molecules may be developed as a new type of porous materials with different features from porous solids.     

Dielectric and13C NMR studies of the carbon monoxide clathrate hydrate

The structure I clathrate hydrate of carbon monoxide has been studied using dielectric measurements and¹³C NMR spectroscopy. Broad, weak dielectric absorption curves with maxima at 2.2–3.8 K yieldE _a = 0.14 kJ mol^–1 for the average Arrhenius activation energy associated with the reorientation of the low polarity guest. Except for H₂S this represents the fastest reorienting polar guest known among the clathrate hydrates. The low temperature dielectric absorption curves can best be fitted with a Cole-Davidson asymmetric distribution of relaxation times and activation energies (with = 0.06 at 4 × 10⁶ Hz), which at 10⁷ Hz has been resolved into a double symmetric distribution of discrete relaxation times for CO in the small and large cages. The cross-polarization magic angle spinning¹³C NMR spectra indicate identical chemical shifts for CO in the small and large cages, in contrast to other hydrates. The static spectra show that the CO molecules undergo anisotropic reorientation in the large cages and that there is still considerable mobility at 77 K. One possible model for the anisotropic motion has the CO rapidly moving among sites over each of the 14 faces of the cage with the CO axis orientated towards the cage centre. The cage occupancy ratio at 220 K, _s/ _L = 1.11, indicates slightly greater preference of CO for the small cage.Dedicated to Dr D. W. Davidson in honor of his great contributions to the sciences of inclusion phenomena.     

A generalized method to calculate diffusion rates in polydisperse systems. Further results on Rouse dynamics in the concentrated regime

Experiments designed to thoroughly test a recently proposedgeneralized method to calculate diffusion rates in polydisperse systems have been carried out. Polydisperse polystyrene (PS) samples were allowed to diffuse in a poly(phenylene oxide) (PPO) matrix. Designed blends were made from anionically polymerized PS with molecular weights which cover most of the ranges where Rouse dynamics control the diffusion processes. The diffusion temperatures range from (T_g – 1 K) to (T_g + 105 K), causing the monomeric friction factor values for PS to change by up to seven orders of magnitude along the diffusion coordinate. Calculations performed with the above mentioned method agree with Raman and DMA experimental data.