EPR and ENDOR study of radiation-induced radical formation in purines: sodium inosine crystals X-irradiated at 10 K

X-irradiated single crystals of sodium inosine (Na(+)*Inosine(-)*2.5H(2)O), in which the hypoxanthine base is present as the N1-deprotonated anion, were investigated using K-band (24 GHz) electron paramagnetic resonance (EPR), electron-nuclear double resonance (ENDOR), and ENDOR induced EPR (EIE) techniques at 10 K. At least five different radicals were present immediately after irradiation at 10 K. R1, which decayed upon warming the crystals to 50 K, was identified as the electron-loss product of the parent N1-deprotonated hypoxanthine base. Hyperfine couplings to HC8 and HC2 were fully characterized with ENDOR spectroscopy, and the identification was supported by DFT calculations. R2, which also decayed on warming to 50 K, exhibited nearly equal couplings to HC2 and HC8. Taken in combination with an extensive set of DFT calculations, the experimental results indicate that R2 is the (doubly negative) product of electron-gain by the initially anionic N1-deprotonated hypoxanthine parent. R3, which exhibited hyperfine coupling only to HC8 could not be identified. R4, which persisted on annealing to 260 K, exhibited one large alpha-proton hyperfine coupling which was fully characterized by ENDOR. Based on DFT calculations and the experimental data, R4 was identified as the product of net H-abstraction from C5'. The remaining HC5' was the source of the measured alpha-proton coupling. R5, present at low temperature and the only observable radical after warming the crystals to room temperature, was identified as the C8-H addition radical. The alpha-coupling to HC2 and beta-couplings to the pair of C8 methlyene protons were fully characterized by ENDOR.     

Structure of radicals from X-irradiated guanine derivatives. 2. An experimental and computational study of 9-ethylguanine single crystals

An EPR (electron paramagnetic resonance) and ENDOR (electron-nuclear double resonance) study of 9-ethylguanine crystals X-irradiated at 10 K detected evidence for three radical forms. Radical R1, characterized by three proton and two nitrogen hyperfine interactions, was identified as the product of net hydrogenation at N7 of the guanine unit. R1, which evidently formed by protonation of the primary electron addition product, exhibited an unusually distorted structure leading to net positive isotropic components of the alpha-coupling to the hydrogen attached to C8 of the guanine unit. Radical R2, characterized by two nitrogen and three proton hyperfine couplings, was identified as the primary electron loss product, *G+. Distinguishing between *G+ and its N1-deprotonated product is difficult because their couplings are so similar, and density functional theory (DFT) calculations were indispensable for doing so. The results for R2 provide the most complete ENDOR characterization of *G+ presented so far. Radical R3 exhibited a narrow EPR pattern but could not be identified. The identification of radicals R1 and R2 was supported by DFT calculations using the B3LYP/6-311+G(2df,p)//6-31+G(d,p) approach. Radical R4, detected after irradiation of the crystals at room temperature, was identified as the well-known product of net hydrogenation at C8 of the guanine component. Spectra from the room temperature irradiation contained evidence for R5, an additional radical that could not be identified. Radical concentrations from the low temperature irradiation were estimated as follows: R1, 20%; R2, 65%; R3, 15%.     

Structure of radicals from X-irradiated guanine derivatives: an experimental and computational study of sodium guanosine dihydrate single crystals

In sodium guanosine dihydrate single crystals, the guanine moiety is deprotonated at N1 due to growth from high-pH (>12) solutions. Electron paramagnetic resonance (EPR) and electron-nuclear double resonance (ENDOR) studies of crystals X-irradiated at 10 K detected evidence for three radical forms. Radical R1, characterized by two proton and two nitrogen hyperfine interactions, was identified as the product of net hydrogenation at N7 of the N1-deprotonated guanine unit. R1 exhibited an unusually distorted structure leading to net positive isotropic components of the hydrogen alpha-couplings. Radical R2, characterized by one proton and one nitrogen hyperfine coupling, was identified as the primary electron-loss product. This product is equivalent to that of deprotonation at N1 by the guanine cation and represents the first ENDOR characterization of that product. Radical R3, characterized by a single hydrogen hyperfine coupling, was identified as the product of net dehydrogenation at C1' of the ribose moiety. The identification of radicals R1-R3 was supported by density functional theory (DFT) calculations on several possible structures using the B3LYP/6-311G(2df,p)//6-31G(d,p) approach. Radical R4, detected after warming the crystals to room temperature, was identified as the well-known product of net hydrogenation of C8 of the (N1-deprotonated) guanine component. Radical R1, evidently formed by protonation of the primary electron addition product, was present as roughly 60% of the total radicals detected at 10 K. Radical R2 was present as roughly 27% of the total yield, and the concentration of R3 contributed the remaining 13%. R3 is evidently the product of one-electron oxidation followed by deprotonation; thus, the balance of oxidation and reduction products is approximately equal within experimental uncertainty.     

Q-band EPR and ENDOR of low temperature X-irradiated beta-D-fructose single crystals

Beta-D-fructose single crystals were in situ X-irradiated at 80 K and measured using electron paramagnetic resonance (EPR), electron nuclear double resonance (ENDOR) and ENDOR-induced EPR (EIE) techniques at Q-band (34 GHz) microwave frequencies. The measurements revealed the presence of at least four carbon-centered radicals stable at 80 K. By means of ENDOR angular variations in the three principal crystallographic planes, six proton hyperfine coupling tensors could be determined and were assigned to four different radicals by the aid of EIE. Two of the radicals exhibit only beta-proton hyperfine couplings and reveal almost identical EIE spectra. For the other two radicals, the major hyperfine splitting originates from a single alpha-proton hyperfine coupling and their EIE spectra were also quite similar. The similarity of the EIE spectra and hyperfine tensors led to the assumption that there are only two essentially different radical structures. The radical exhibiting only beta-proton hyperfine couplings was assigned to a C3 centered radical arising from H3 abstraction and the other radical suggested to be an open-ring species with a disrupted C2-C3 bond and a double C2-O2 bond. A possible formation mechanism for the latter open-ring radical is presented. By means of cluster density functional theory (DFT) calculations, the structures of the two radicals were determined and a fairly good agreement between the calculated and experimental hyperfine tensors was found.     

Model Calculations of Radiation-Induced Damage in 1-Methyluracil:9-Ethyladenine

Detailed EPR and ENDOR experiments on the cocrystalline complex of 1-methyluracil:9-Ethyladenine (MUEA) have revealed that the major radiation-induced products observed at 10 K on MU are: MUEA1, a radical formed by net hydrogen abstraction from the N1-CH₃ methyl group, MUEA2, the MU radical anion, and MUEA3, the C5 H-addition radical. The following four products were observed on the adenine moiety at 10 K, MUEA4, the N3 protonated adenine anion, MUEA5, the native adenine cation, MUEA6, the amino deprotonated adenine cation, and MUEA7, the C8 H-addition radical formed by net H-addition to C8 of the adenine base. The geometries, energetics, and hyperfine properties of all possible radicals of MU and EA, the native anions and cations, as well as radicals formed via net hydrogen atom abstraction (deprotonated cations) or addition (protonated anions) were investigated theoretically. All systems were optimized using the hybrid Hartree–Fock–density functional theory functional B3LYP, in conjunction with the 6-31G(d,p) basis set of Pople and co-workers. Calculations of the anisotropic hyperfine couplings for all the radicals observed in MUEA are presented and are shown to compare favorably with the experimentally measured hyperfine couplings. The calculated ionizations potentials indicate that EA would be the preferred oxidation site. In MUEA, both the adenine cation and its N4-deprotonated derivative were observed. The calculated electron affinities indicate that MU would be the preferred reduction site. In MUEA radical, MUEA2 is a uracil reduction product, however the protonation state of this radical could not be determined experimentally. Calculations suggest that MUEA2 is actually the C4=O protonated anion.     

Single crystals of L-O-serine phosphate X-irradiated at low temperatures: EPR, ENDOR, EIE, and DFT studies

Single crystals of the phosphorylated amino acid L-O-serine phosphate were X-irradiated and studied at 10 K and at 77 K using EPR, ENDOR, and EIE techniques. Two radicals, R1(10 K) and R1(77 K), were detected and characterized as two different geometrical conformations of the protonated reduction product >CH-C(OH)(2). R1(10 K) is only observed after irradiation at 10 K, and upon heating to 40 K, R1(10 K) transforms rapidly and irreversibly into R1(77 K). The transition from R1(10 K) to R1(77 K) strongly increases the isotropic hyperfine coupling of the C-CH(beta) coupling (Delta = 32 MHz) and the major C-OH(beta) coupling (Delta = 47 MHz), in sharp contrast to the their much reduced anisotropic hyperfine couplings after the transition. An umbrella-like inversion of the carboxylic acid center, accompanied by minor geometrical adjustments, explains the changes of these observed isotropic and anisotropic couplings. DFT calculations were done on the reduced and protonated L-O-serine phosphate radical at the B3LYP/6-311+G(2df,p)//B3LYP/6-31+G(d) level of theory in order to support the experimental observations. Two different conformations of the anion radical, related by an inversion at the carboxylic center, could be found within the single molecule partial energy-optimization scheme. These two conformations reproduce the experimental hyperfine couplings from radicals R1(10 K) and R1(77 K). A third radical, radical R2, was observed experimentally at both 10 and 77 K and was shown to be due to the decarboxylated L-O-serine phosphate oxidation product, a conclusion fully supported from the DFT calculations. Upon thermal annealing from 77 to 295 K, radicals R1(77 K) and R2 disappeared and all three previously observed room-temperature radicals could be observed. No phosphate-centered radicals could be observed at any temperatures, indicating that the phosphate-ester bond break for one of the room-temperature radicals does not occur by dissociative electron capture at the phosphate group.     

<Superscript>1</Superscript>H and <Superscript>13</Superscript>C NMR Study of Bifurcated Intramolecular Hydrogen Bonds in 2,6-Bis(2-pyrrolyl)pyridine and 2,6-Bis(1-vinyl-2-pyrrolyl)pyridine

According to the ¹H and ¹³C NMR data, bifurcated intramolecular hydrogen bond NH?N?HN in 2,6-bis(2-pyrrolyl)pyridine fixes its molecule in a conformation with syn orientation of the pyrrole rings. An analogous bifurcated hydrogen bond CH?N?HC is formed in 2,6-bis(1-vinyl-2-pyrrolyl)pyridine. 2-(1-Vinyl-2-pyrrolyl)-6-(2-pyrrolyl)pyridine is characterized by unsymmetrical bifurcated hydrogen bond NH? N?HC.     

Pulsed EPR and DFT characterization of radicals produced by photo-oxidation of zeaxanthin and violaxanthin on silica-alumina

Pulsed electron nuclear double resonance (ENDOR) and two-dimensional (2D)-hyperfine sublevel correlation spectroscopy (HYSCORE) studies in combination with density functional theory (DFT) calculations revealed that photo-oxidation of natural zeaxanthin (ex Lycium halimifolium) and violaxanthin (ex Viola tricolor) on silica-alumina produces the carotenoid radical cations (Car*+) and also the neutral carotenoid radicals (#Car*) as a result of proton loss (indicated by #) from the C4(4') methylene position or one of the methyl groups at position C5(5'), C9(9'), or C13(13'), except for violaxanthin where the epoxide at positions C5(5')-C6(6') raises the energy barrier for proton loss, and the neutral radicals #Car*(4) and #Car*(5) are not observed. DFT calculations predict the largest isotropic beta-methyl proton hyperfine couplings to be 8 to 10 MHz for Car*+, in agreement with previously reported hyperfine couplings for carotenoid pi-conjugated radicals with unpaired spin density delocalized over the whole molecule. Anisotropic alpha-proton hyperfine coupling tensors determined from the HYSCORE analysis were assigned on the basis of DFT calculations with the B3LYP exchange-correlation functional and found to arise not only from the carotenoid radical cation but also from carotenoid neutral radicals, in agreement with the analysis of the pulsed ENDOR data. The formation of the neutral radical of zeaxanthin should provide another effective nonphotochemical quencher of the excited state of chlorophyll for photoprotection in the presence of excess light.     

ESR study of the carbon 13 hyperfine coupling tensors of the (COOH)H(OH) and COOH(OH2) radicals

(COOH)(H)OH and (COOH)(OH)₂ radicals trapped in single crystals of glycolic and mesoxalic acids are studied by EPR. ¹³C and hydrogen coupling hyperfine tensors are determined. It is concluded from results relative to ¹³C couplings that both radicals are planar.     

Combined electron magnetic resonance and density functional theory study of 10 K X-irradiated beta-D-fructose single crystals

Primary free radical formations in fructose single crystals X-irradiated at 10 K were investigated at the same temperature using X-band Electron Paramagnetic Resonance (EPR), Electron Nuclear Double Resonance (ENDOR) and ENDOR induced EPR (EIE) techniques. ENDOR angular variations in the three principal crystallographic planes and a fourth skewed plane allowed the unambiguous determination of five proton hyperfine coupling tensors. From the EIE studies, these hyperfine interactions were assigned to three different radicals, labeled T1, T1* and T2. For the T1 and T1* radicals, the close similarity in hyperfine coupling tensors suggests that they are due to the same type of radical stabilized in two slightly different geometrical conformations. Periodic density functional theory calculations were used to aid the identification of the structure of the radiation-induced radicals. For the T1/T1* radicals a C3 centered hydroxyalkyl radical model formed by a net H abstraction is proposed. The T2 radical is proposed to be a C5 centered hydroxyalkyl radical, formed by a net hydrogen abstraction. For both radicals, a very good agreement between calculated and experimental hyperfine coupling tensors was obtained.     

Rotational spectra of the carbon-chain radicals HC5O, HC6O, and HC7O

Three new free carbon-chain radicals, HC5O, HC6O, and HC7O, and their deuterated isotopic species have been observed by Fourier transform microwave spectroscopy of a supersonic molecular beam. In contrast to the shorter HCnO radicals, these all have linear heavy-atom backbones and 2Pi electronic ground states. Like the isovalent HCnS radicals, the ground states of the HCnO radicals alternate with odd and even numbers of carbon atoms: those of HC5O and HC7O are 2Pi1/2 and that of HC6O is 2Pi3/2. From frequency measurements between 6 and 26 GHz, the rotational constant B, the centrifugal distortion constant D, and the lambda-type doubling and magnetic hyperfine constants have been determined to high precision for each chain. Predicted properties from coupled-cluster calculations are also reported for chains up to HC9O. The production of HCnO radicals for n even was highly favored when O2 was used as the source of oxygen, but those with n odd were best produced with CO.     

Radiation-induced radicals in glucose-1-phosphate. I. Electron paramagnetic resonance and electron nuclear double resonance analysis of in situ X-irradiated single crystals at 77 K

Electron magnetic resonance analysis of radiation-induced defects in dipotassium glucose-1-phosphate dihydrate single crystals in situ X-irradiated and measured at 77 K shows that at least seven different carbon-centered radical species are trapped. Four of these (R1-R4) can be fully or partly characterized in terms of proton hyperfine coupling tensors. The dominant radical (R2) is identified as a C1-centered species, assumedly formed by a scission of the sugar-phosphate junction and the concerted formation of a carbonyl group at the neighboring C2 carbon. This structure is chemically identical to a radical recently identified in irradiated sucrose single crystals. Radical species R1 and R4 most likely are C3- and C6-centered species, respectively, both formed by a net hydrogen abstraction. R3 is suggested to be chemically similar to but geometrically different from R4. Knowledge of the identity of the sugar radicals present at 77 K provides a first step in elucidating the formation mechanism of the phosphoryl radicals previously detected after X-irradiation at 280 K. In paper II, the chemical identity, precise conformation, and possible formation mechanisms of these radical species are investigated by means of DFT calculations and elementary insight into the radiation chemistry of sugar and sugar derivatives is obtained.     

Insight into detailed mechanism of the atmospheric reaction of imidogen with hydroxyl: a computational study

The details of reaction mechanism of imidogen (NH) and hydroxyl radicals are explored at the UMP2(FC)/cc–pVDZ and PMP4(FC,SDTQ)/cc–pVQZ//UMP2 + ZPE levels, theoretically. The initial association between NH and OH radicals leads to the formation of the intermediates, NH…OH, HN…HO, cis HNOH, and trans HNOH, through the barrierless and exothermic processes. By starting from the initial intermediates, all possible paths for the formation of H + HNO, H₂ + NO, H₂O + ⁴N, H₂N + ³O, and H + ³HON products are investigated on potential energy surface. The results reveal that H₂O + ⁴N is the main product involved in the mechanism of hydrogen atom abstraction of NH by OH radical through the intermediate NH…OH.     

EPR, ENDOR, and DFT study of free radicals in L-lysine·HCl·2H2O single crystals X-irradiated at 298 K

With K-band EPR (Electron Paramagnetic Resonance), ENDOR (Electron-Nuclear DOuble Resonance), and EIE (ENDOR-induced EPR) techniques, three free radicals (RI-RIII) in L-lysine hydrochloride dihydrate single crystals X-irradiated at 298 K were detected at 298 K, and six radicals (R1, R1', R2-R5) were detected if the temperature was lowered to 66 K from 298 K. R1 and RI dominated the central portion of the EPR at 66 and 298 K, respectively, and were identified as main chain deamination radicals, (-)OOC?H(CH(2))(4)(NH(3))(+). R1' was identified as a main chain deamination radical with the different configuration from R1 at 66 K, and it probably formed during cooling the temperature from 298 to 66 K. The configurations of R1, R1', and RI were analyzed with their coupling tensors. R2 and R3 each contain one α- and four β-proton couplings and have very similar EIEs at three crystallographic axes. The two-layer ONIOM calculations (at B3LYP/6-31G(d,p):PM3) support that R2 and R3 are from different radicals: dehydrogenation at C4, (-)OOCCH(NH(3))(+)CH(2)?H(CH(2))(2)(NH(3))(+), and dehydrogenation at C5, (-)OOCCH(NH(3))(+)(CH(2))(2)?HCH(2)(NH(3))(+), respectively. The comparisons of the coupling tensors indicated that R2 (66 K) is the same radical as RII (298 K), and R3 is the same as RIII. Thus, RII and RIII also are the radicals of C4 and C5 dehydrogenation. R4 and R5 are minority radicals and were observed only when temperature was lowered to 66 K. R4 and R5 were only tentatively assigned as the side chain deamination radical, (-)OOCCH (NH(3))(+)(CH(2))(3)?H(2), and the radical dehydrogenation at C3, (-)OOCCH(NH(3))(+)?H(CH(2))(3)(NH(3))(+), respectively, although the evidence was indirect. From simulation of the EPR (B//a, 66 K), the concentrations of R1, R1', and R2-R5 were estimated as: R1, 50%; R1', 11%; R2, 14%; R3, 16%; R4, 6%; R5, 3%.     

Determination of radical re-encounter probability distributions from magnetic field effects on reaction yields

Measurements are reported of the effects of 0-23 mT applied magnetic fields on the spin-selective recombination of Py*- and DMA*+ radicals formed in the photochemical reaction of pyrene and N,N-dimethylaniline. Singlet <--> triplet interconversion in [Py*- DMA*+] radical pairs is probed by investigating combinations of fully protonated and fully deuterated reaction partners. Qualitatively, the experimental B1/2 values for the four isotopomeric radical pairs agree with predictions based on the Weller equation using known hyperfine coupling constants. The amplitude of the "low field effect" (LFE) correlates well with the ratio of effective hyperfine couplings, aDMA/aPy. An efficient method is introduced for calculating the spin evolution of [Py*- DMA*+] radical pairs containing a total of 18 spin-1/2 and spin-1 magnetic nuclei. Quantitative analysis of the magnetic field effects to obtain the radical re-encounter probability distribution f (t )-a highly ill-posed and underdetermined problem-is achieved by means of Tikhonov and maximum entropy regularization methods. The resulting f (t ) functions are very similar for the four isotopomeric radical pairs and have significant amplitude between 2 and 10 ns after the creation of the geminate radical pair. This interval reflects the time scale of re-encounters that are crucial for generating the magnetic field effect. Computer simulations of generalized radical pairs containing six spin-1/2 nuclei show that Weller's equation holds approximately only when the radical pair recombination rate is comparable to the two effective hyperfine couplings and that a substantial LFE requires, but is not guaranteed by, the condition that the two effective hyperfine couplings differ by more than a factor of 5. In contrast, for very slow recombination, essentially any radical pair should show a significant LFE.     

EPR spectra of Cu2+ and VO2+ ions in ammonium hydrogen oxalate hemihydrate [(NH4)HC2O4 . (1/2)H2O] single crystals

Cu(2+) and VO(2+) doped ammonium hydrogen oxalate hemihydrate, [(NH(4))HC(2)O(4) . (1/2)H(2)O], single crystals have been studied at room temperature and at 113K in three mutually perpendicular planes. Both ions yield unexpectedly large number of lines. The calculated results of the Cu(2+) and VO(2+) doped in [(NH(4))HC(2)O(4) . (1/2)H(2)O] indicate that both ions substitute with the NH(4)(+) ion in the structure. The EPR spectra of Cu(2+) ions are characteristic of tetragonally elongated octahedral site and the spectra of VO(2+) are characteristic of tetragonally compressed complex. The angular variation of the EPR spectra has shown that two different Cu(2+) and VO(2+) complexes are located in different chemical environments, and each environment contains two magnetically inequivalent Cu(2+) and VO(2+) sites in distinct orientations occupying substitutional positions in the lattice and show very high angular dependence. The principal g and the hyperfine (A) values of both ions are determined.     

Radicals derived from uric acid and its methyl derivatives in aqueous solution: an EPR spectroscopy and theoretical study

The oxidation of uric and of four N-methyluric acids in aqueous solution was studied by EPR spectroscopy. The primary oxidising radicals react with uric acid and its methyl derivatives by formal hydrogen abstraction from an NH group to yield radical-anions in neutral or moderately basic solutions and the respective radical-dianions in basic media. In the case of uric acid, the radical-trianion was detected at very high pH. The pKa values of the radical-anions were determined to be in the range 9.5-11.2. The pKa of uric acid radical-dianion was estimated to be 13.0. DFT calculations were performed to assign the hyperfine coupling constants and to determine the predominant tautomeric structure of the radicals. The uric acid radical-anion exists as the N1H, N9H tautomer, while in the radical-dianion the N1H structure is the most stable one. The intrinsic acidity of the NH protons both in uric acid and in its radicals seems to follow the order N1H < N9H < N3H.     

An Ab initio study on the conformations of protonated,neutral, and deprotonated amidine

Ab initio SCF molecular orbital calculations have been performed to ascertain the conformational preferences of protonated, neutral, and deprotonated amidine [HC(?NH)NH₂], using the 3-21G split valence basis set. The states of eight stable species, eight transition states, and four higher-order saddle points have been determined by complete geometry optimization utilizing analytic energy gradient techniques. Protonation at the amidine ?NH is preferred over the –NH₂ site by 37.1 kcal/mol. Neutral amidine has rotational barriers of 9.6 and 11.7 kcal/mol for the HN?CN cis and trans isomers, respectively, while all the stable HC(NH₂)₂⁺ and HC(NH)₂^? species possess torsional barriers larger than 23 kcal/mol. There is, however, essentially free C—N single-bond rotation in HC(?NH)NH₃⁺, the calculated barriers being 0.7 and 1.8 kcal/mol for the cis and trans HN?CN isomers, respectively.     

Endgroup-assisted siloxane bond cleavage in the gas phase

Unimolecular dissociation of H(2)N(CH(2))(3)SiOSi(CH(2))(3)NH(3)(+) generates SiC(5)H(16)NO(+) and SiC(5)H(14)N(+). The formation of SiC(5)H(16)NO(+) involves dissociation of a Si[bond]O bond and formation of an O[bond]H bond through rearrangement. The fragmentation mechanism was investigated utilizing ab initio calculations and Fourier transform ion cyclotron resonance (FTICR) mass spectrometry in combination with hydrogen/deuterium (H/D) exchange reactions. Sustained off-resonance irradiation collision-induced dissociation (SORI-CID) studies of the fully deuterated ion D(2)N(CH(2))(3)SiOSi(CH(2))(3)ND(3)(+) provided convincing evidence for a backbiting mechanism which involves hydrogen transfer from the terminal amine group to the oxygen to form a silanol-containing species. Theoretical calculations indicated decomposition of H(2)N(CH(2))(3)SiOSi(CH(2))(3)NH(3)(+) through a backbiting mechanism is the lowest energy decomposition channel, compared with other alternative routes. Two mechanisms were proposed for the fragmentation process which leads to the siloxane bond cleavage and the SORI-CID results of partially deuterated precursor ions suggest both mechanisms should be operative. Rearrangement to yield a silanol-containing product ion requires end groups possessing a labile hydrogen atom. Decomposition of disiloxane ions with end groups lacking labile hydrogen atoms yielded product ions from direct bond cleavages.     

Competition between NH.HIr Intramolecular Proton-Hydride Interactions and NH.FBF(3)(-) or NH.O Intermolecular Hydrogen Bonds Involving [IrH(2-thiazolidinethione)(4)(PCy(3))](BF(4))(2) and Related Complexes

The reaction of IrH(5)(PCy(3))(2) in acetone with 2 equiv of HBF(4) results in the formation of the air-stable complex [Ir(H)(2)(PCy(3))(2)(acetone)(2)]BF(4), 1. The reaction of 1 with an excess of 2-thiazolidinethione or 2-benzothiazolethione in the presence of 2 equiv of HBF(4) gives the complexes [Ir(H)(PCy(3))(L)(4)](BF(4))(2) (2a, L = 2-thiazolidinethione; 2b, L = 2-benzothiazolethione). Complex 2a has an intramolecular NH.H(Ir).HN interaction both in the crystalline solid as determined by X-ray diffraction and in a CD(2)Cl(2) solution as determined by the T(1) method. The d(HH) were determined to be 2.2 +/- 0.1 ? in the solid state and 1.9 +/- 0.1 ? in solution. The NH.H(Ir).HN interactions and NH.F.HN hydrogen bonds which involve FBF(3)(-) form a four-member ring in a butterfly conformation. The nOe effect of the hydride on the NH proton is around 10%. A crystal of 2a is in the triclinic space group P&onemacr; with a = 11.426(3), b = 11.922(3), c = 19.734(4) ?, alpha = 87.05(1) degrees, beta = 88.23(1) degrees, gamma = 75.50(1) degrees, V = 2599(1) ?(3), and Z = 2 at T = 173 K; full-matrix least-squares refinement on F(2) was performed for 10 198 independent reflections; R[F(2)>2sigma(F(2))] = 0.0480, R(w)(F(2)) = 0.099. The formation of the NH.HIr proton-hydride interaction is as favorable as the formation of intermolecular hydrogen bonds NH.FBF(3)(-) or NH.O hydrogen bonds with OPPh(3) or H(2)O in CD(2)Cl(2). A similar NH.HIr interaction also has been observed in the complexes [Ir(H)(2)(PCy(3))(2)(L)(2)]BF(4) (3a, L = 2-thiazolidinethione; 3b, L = 2-benzothiazolethione) but not in the complexes with L = NH(2)NH(2) (3c) and L = NH(3) (3d). Both the NH and IrH protons are deuterated when a solution of 2 or 3 in C(6)D(6) is exposed to 1 atm of D(2) gas or D(2)O.