l‐Cysteinium semioxalate

The title salt, C₃H₈NO₂⁺·C₂HO₄⁻, formed between l ‐cysteine and oxalic acid, was studied as part of a comparison of the structures and properties of pure amino acids and their cocrystals. The structure of the title salt is very different from that formed by oxalic acid and equivalent amounts of d ‐ and l ‐cysteine molecules. The asymmetric unit contains an l ‐cysteinium cation and a semioxalate anion. The oxalate anion is only singly deprotonated, in contrast with the double deprotonation in the crystal structure of bis(dl ‐cysteinium) oxalate. The oxalate anion is not planar. The conformation of the l ‐cysteinium cation differs from that of the neutral cysteine zwitterion in the monoclinic and orthorhombic polymorphs of l ‐cysteine, but is similar to that of the cysteinium cation in bis(dl ‐cysteinium) oxalate. The structure of the title salt can be described as a three‐dimensional framework formed by ions linked by strong O—H...O and N—H...O and weak S—H...O hydrogen bonds, with channels running along the crystallographic a axis containing the bulky –CH₂SH side chains of the cysteinium cations. The cations are only linked through hydrogen bonds via semioxalate anions. There are no direct cation–cation interactions via N—H...O hydrogen bonds between the ammonium and carboxylate groups, or via weaker S—H...S or S—H...O hydrogen bonds.     

Bis(dl‐cysteinium) oxalate

In the title compound, 2C₃H₈NO₂S⁺·C₂O₄²⁻, the oxalate anion occupies an inversion centre and is coordinated to cysteine molecules of different chirality (l and d ) via O—H...O and N—H...O hydrogen bonds, the resulting cysteine–oxalate stoichiometry in the crystal structure being 2:1. The oxalate anion is completely deprotonated, whereas cysteine has a positively charged –NH₃⁺ group and a neutral protonated carboxyl group. The structure is built from infinite hydrogen‐bonded triple layers, consisting of an oxalate layer in the middle with layers of l ‐ and d ‐cysteine molecules on either side. The thiol groups are at the external sides of the layers and form S—H...O hydrogen bonds with the carboxyl groups of neighbouring cysteine molecules. An interesting feature of the structure is the occurrence of short S...S contacts between SH groups of molecules in neighbouring layers, which form not S—H...S but S—H...O intermolecular hydrogen bonds. Due to the effects of crystal packing and intermolecular hydrogen‐bond formation, the conformation of the cysteine cation in the title structure is different from that calculated theoretically for an individual cation, as well as from those of cysteine zwitterions in crystals of pure cysteine.     

Betaine 0.77‐perhydrate 0.23‐hydrate and common structural motifs in crystals of amino acid perhydrates

The title compound, betaine 0.77‐perhydrate 0.23‐hydrate, (CH₃)₃N⁺CH₂COO⁻·0.77H₂O₂·0.23H₂O, crystallizes in the orthorhombic noncentrosymmetric space group Pca2₁. Chiral molecules of hydrogen peroxide are positionally disordered with water molecules in a ratio of 0.77:0.23. Betaine, 2‐(trimethylazaniumyl)acetate, preserves its zwitterionic state, with a positively charged ammonium group and a negatively charged carboxylate group. The molecular conformation of betaine here differs from the conformations of both anhydrous betaine and its hydrate, mainly in the orientation of the carboxylate group with respect to the C—C—N skeleton. Hydrogen peroxide is linked via two hydrogen bonds to carboxylate groups, forming infinite chains along the crystallographic a axis, which are very similar to those in the crystal structure of betaine hydrate. The present work contributes to the understanding of the structure‐forming factors for amino acid perhydrates, which are presently attracting much attention. A correlation is suggested between the ratio of amino acid zwitterions and hydrogen peroxide in the unit cell and the structural motifs present in the crystal structures of all currently known amino acids perhydrates. This can help to classify the crystal structures of amino acid perhydrates and to design new crystal structures.     

Three‐dimensional hydrogen‐bonded framework in bis(melamin‐1‐ium) naphthalene‐1,5‐disulfonate melamine pentahydrate

Crystals of the title compound, 2C₃H₇N₆⁺·C₁₀H₆O₆S₂²⁻·C₃H₆N₆·5H₂O, are built up of neutral 2,4,6‐triamino‐1,3,5‐triazine (melamine), singly protonated melaminium cations, naphthalene‐1,5‐disulfonate dianions and water molecules. Two independent anions lie across centres of inversion in the space group P. The melamine molecules are connected by N—H...N hydrogen bonds into two different one‐dimensional polymers almost parallel to the (010) plane, forming a stacking structure along the b axis. The centrosymmetric naphthalene‐1,5‐disulfonate anions interact with water molecules via O—H...O hydrogen bonds, forming layers parallel to the (001) plane. The cations and anions are connected by N—H...O and O—H...N hydrogen bonds to form a three‐dimensional supramolecular framework.     

l‐Leucinium perchlorate

Crystals of l ‐leucinium perchlorate, C₆H₁₄NO₂⁺·ClO₄⁻, are built up from protonated l ‐leucinium cations and perchlorate anions. l ‐Leucinium cations related by a twofold screw axis are inter­connected by N—H⋯O hydrogen bonds into zigzag chains parallel to [010]. The O atoms of the perchlorate anions act as acceptors of hydrogen bonds that link the l ‐leucinium chains into separated but inter­acting two‐dimensional layers parallel to (001). Since the title compound crystallizes in a non‐centrosymmetric space group, it can be useful as a material for non‐linear optics. The efficiency of second harmonic generation is about twice that of K₂[HPO₄].     

Water‐induced pseudo‐quadruple hydrogen‐bonding motifs in xanthine–inorganic acid complexes

In xanthinium nitrate hydrate [systematic name: 2,6‐dioxo‐1,2,3,6‐tetrahydro‐9H‐purin‐7‐ium nitrate monohydrate], C₅H₅N₄O₂⁺·NO₃⁻·H₂O, (I), and xanthinium hydrogen sulfate hydrate [systematic name: 2,6‐dioxo‐1,2,3,6‐tetrahydro‐9H‐purin‐7‐ium hydrogen sulfate monohydrate], C₅H₅N₄O₂⁺·HSO₄⁻·H₂O, (II), the xanthine molecules are protonated at the imine N atom with the transfer of an H atom from the inorganic acid. The asymmetric unit of (I) contains a xanthinium cation, a nitrate anion and one water molecule, while that of (II) contains two crystallographically independent xanthinium cations, two hydrogen sulfate anions and two water molecules. A pseudo‐quadruple hydrogen‐bonding motif is formed between the xanthinium cations and the water molecules via N—H...O and O—H...O hydrogen bonds in both structures, and leads to the formation of one‐dimensional polymeric tapes. These cation–water tapes are further connected by the respective anions and aggregate into two‐dimensional hydrogen‐bonded sheets in (I) and three‐dimensional arrangements in (II).     

Strong hydrogen‐bonded amino acid dimers in l‐alanine alaninium nitrate

The title compound, C₃H₇NO₂·C₃H₈NO₂⁺·NO₃^?, contains l ‐alanine–alaninium dimers bonded via the carboxyl groups by a strong asymmetric hydrogen bond with an O?O distance of 2.4547 (19) Å. The neutral alanine mol­ecule exists as a zwitterion, where the carboxyl group is dissociated and the amino group is protonated. The alaninium cation has both groups in their acidic form. The alanine mol­ecule and the alaninium cation differ only slightly in their conformation, having an N—C_α—C=O torsion angle close to ?25°. The dimers and the nitrate anion are joined through a three‐dimensional hydrogen‐bond network, in which the full hydrogen‐bonding capabilities of the amino groups of the two alanine moieties are realised.     

(S)‐5‐Benzylimidazolidine‐2,4‐dione monohydrate

The crystal structure of the title compound, C₁₀H₁₀N₂O₂·H₂O, also known as l ‐5‐benzylhydantoin monohydrate, is described in terms of two‐dimensional supramolecular arrays built up from infinite chains assembled via N—H...O and O—H...O hydrogen bonds among the organic molecules and solvent water molecules, with graph‐set R³₃(10)C(5)C²₂(6). The hydrogen‐bond network is reinforced by stacking of the layers through C—H...π interactions.     

Hydrogen‐bonding interactions in (3,4‐dimethoxyphenyl)acetic acid monohydrate

The crystal structure of the title compound, C₁₀H₁₂O₄·H₂O, consists of (3,4‐dimethoxyphenyl)acetic acid and water molecules linked by O—H...O hydrogen bonds to form cyclic structures with graph‐set motifs R₁²(5) and R₄⁴(12). These hydrogen‐bond patterns result in a three‐dimensional network with graph‐set motifs R₄⁴(20) and R₄⁴(22), and the formation of larger macrocycles, respectively. The C—C bond lengths and the endocyclic angles of the benzene ring show a noticeable asymmetry, which is connected with the charge‐transfer interaction of the carboxyl or methoxy groups and the benzene ring. The title compound is one of the simple carboxylic acid systems that form hydrates. Thus, the significance of this study lies in the analysis of the interactions in this structure and the aggregations occurring via hydrogen bonds in two crystalline forms of (3,4‐dimethoxyphenyl)acetic acid, namely the present hydrate and the anhydrous form [Chopra, Choudhury & Guru Row (2003). Acta Cryst. E 59 , o433–o434]. The correlation between the IR spectrum of this compound and its structural data are also discussed.     

Bis[tris(2,2′‐bipyridyl‐κ2N,N′)cobalt(II)] cyclo‐tetravanadate undecahydrate

The title compound, [Co(C₁₀H₈N₂)₃]₂[V₄O₁₂]·11H₂O, is composed of two symmetry‐related cations containing octahedrally coordinated Co^II ions, a centrosymmetric [V₄O₁₂]⁴⁻ anion with an eight‐membered ring structure made up of four VO₄ tetrahedra, and 11 solvent water molecules. The Co^II cations and vanadate anions are isolated and build cation and anion layers, respectively. In addition, the title compound exhibits a three‐dimensional network through intra‐ and intermolecular hydrogen‐bond interactions between water molecules and O atoms of the anions, and the crystal structure is stabilized mainly by hydrogen bonds.     

Bis­(melaminium) dl‐malate tetrahydrate

The crystal structure of the title melaminium salt, bis(2,4,6‐tri­amino‐1,3,5‐triazin‐1‐ium) dl ‐malate tetrahydrate, 2C₃H₇N₆⁺·C₄H₄O₅²⁻·4H₂O, consists of singly protonated melaminium residues, dl ‐malate dianions and water mol­ecules. The melaminium residues are connected into chains by four N—H⃛N hydrogen bonds, and these chains form a stacking structure along the c axis. The dl ‐malate dianions form hydrogen‐bonded chains and, together with hydrogen‐bonded water mol­ecules, form a layer parallel to the (100) plane. The conformation of the malate ion is compared with an ab initio molecular‐orbital calculation. The oppositely charged moieties, i.e. the stacks of melaminium chains and hydrogen‐bonded dl ‐malate anions and water mol­ecules, form a three‐dimensional polymeric structure, in which N—H⃛O hydrogen bonds stabilize the stacking.     

Phenyl‐ring rotational disorder in the two‐dimensional hydrogen‐bonded structure of the 1:1 proton‐transfer salt of the diazo‐dye precursor 4‐(phenyldiazenyl)aniline (aniline yellow) with l‐tartaric acid

In the structure of the 1:1 proton‐transfer compound from the reaction of l ‐tartaric acid with the azo‐dye precursor aniline yellow [4‐(phenyldiazenyl)aniline], namely 4‐(phenyldiazenyl)anilinium (2R,3R)‐3‐carboxy‐2,3‐dihydroxypropanoate, C₁₂H₁₂N₃⁺·C₄H₅O₆⁻, the asymmetric unit contains two independent 4‐(phenyldiazenyl)anilinium cations and two hydrogen l ‐tartrate anions. The structure is unusual in that all four phenyl rings of the two cations have identical rotational disorder with equal occupancy of the conformations. The two hydrogen l ‐tartrate anions form independent but similar chains through head‐to‐tail carboxyl–carboxylate O—H...O hydrogen bonds [graph set C(7)], which are then extended into a two‐dimensional hydrogen‐bonded sheet structure through hydroxy O—H...O hydrogen‐bonded links. The anilinium groups of the 4‐(phenyldiazenyl)anilinium cations are incorporated into the sheets and also provide internal hydrogen‐bonded extensions, while their aromatic tails are layered in the structure without significant association except for weak π–π interactions [minimum ring centroid separation = 3.844 (3) Å]. The hydrogen l ‐tartrate residues of both anions exhibit the common short intramolecular hydroxy–carboxylate O—H...O hydogen bonds. This work provides a solution to the unusual disorder problem inherent in the structure of this salt, as well as giving another example of the utility of the hydrogen tartrate anion in the generation of sheet substructures in molecular assembly processes.     

2,3‐Dimethoxy‐10‐oxostrychnidinium 2‐(2,4,6‐trinitroanilino)benzoate monohydrate: a 1:1 proton‐transfer salt of brucine with o‐picraminobenzoic acid

In the structure of the title 1:1 proton‐transfer compound of brucine with 2‐(2,4,6‐trinitroanilino)benzoic acid, C₂₃H₂₇N₂O₄⁺·C₁₃H₇N₄O₈⁻·H₂O, the brucinium cations form classic undulating ribbon substructures through overlapping head‐to‐tail interactions, while the anions and the three related partial solvent water molecules (having occupancies of 0.73, 0.17 and 0.10) occupy the interstitial regions of the structure. The cations are linked to the anions directly through N—H...O_COO− hydrogen bonds and indirectly by the three water molecules, which form similar conjoint cyclic bridging units [graph set R²₄(8)] through O—H...O_C=O and O—H...O_COO− hydrogen bonds, giving a two‐dimensional layered structure. Within the anion, intramolecular N—H...O_COO− and N—H...O_nitro hydrogen bonds result in the benzoate and picrate rings being rotated slightly out of coplanarity [inter‐ring dihedral angle = 32.50 (14)°]. This work provides another example of the molecular selectivity of brucine in forming stable crystal structures, and also represents the first reported structure of any form of the guest compound 2‐(2,4,6‐trinitroanilino)benzoic acid.     

The supramolecular architecture in 4,4′‐bipyridinium bis(hydrogen oxalate)

The asymmetric unit of the title compound, C₁₀H₁₀N₂²⁺·2C₂HO₄⁻, consists of one half of a 4,4′‐bipyridinium cation, which has inversion symmetry, and a hydrogen oxalate anion, in which an intramolecular hydrogen bond exists. The cations and anions are connected by O—H...O, N—H...O and C—H...O hydrogen bonds, forming a two‐dimensional network, whereas π–π stacking interactions involving the 4,4′‐bipyridinium cations lead to the formation of a three‐dimensional supramolecular structure. An unusual deca‐atomic ring is formed between two hydrogen oxalate anions, which are linked side‐to‐side via O—H...O hydrogen‐bonding interactions.     

Three‐dimensional networks in the 1:2 organic salts 2,2′‐biimidazolium bis(3‐carboxy‐4‐hydroxybenzenesulfonate) and 2,2′‐bibenzimidazolium bis(3‐carboxy‐4‐hydroxybenzenesulfonate) trihydrate

The two title compounds of 2,2′‐biimidazole (Bim) with 5‐sulfosalicylic acid (5‐H₂SSA) and 2,2′‐bibenzimidazole (Bbim) with 5‐H₂SSA are 1:2 organic salts, viz. C₆H₈N₄²⁺·2C₇H₅O₆S⁻, (I), and C₁₄H₁₂N₄²⁺·2C₇H₅O₆S⁻·3H₂O, (II). The cation of compound (I) lies on a centre of inversion, whereas that of (II) lies on a twofold axis. Whilst compound (I) is anhydrous, three water molecules are incorporated into the crystal structure of (II). The substitution of imidazole H atoms by other chemical groups may favour the incorporation of water molecules into the crystal structure. In both compounds, the component cations and anions adopt a homogeneous arrangement, forming alternating cation and anion layers which run parallel to the (001) plane in (I) and to the (100) plane in (II). By a combination of N—H...O, O—H...O and C—H...O hydrogen bonds, the ions in both compounds are linked into three‐dimensional networks. In addition, π–π interactions are observed between symmetry‐related benzene rings of Bbim²⁺ cations in (II).     

Interaction of thiamine with anions in the triclinic form of thiamine iodide: 3‐[(4‐amino‐2‐methylpyrimidin‐5‐yl)methyl]‐5‐(2‐hydroxyethyl)‐4‐methyl‐1,3‐thiazol‐3‐ium iodide 1.25‐hydrate

The asymmetric unit of the title compound, C₁₂H₁₇N₄OS⁺·I⁻·1.25H₂O, contains two crystallographically independent molecules. Both formula units assume the usual F conformation and have the hydroxyethyl group disordered over two sites, each with half occupation. Two thiamine cations are linked by hydrogen bonds into a cyclic dimer. These dimers are further connected by base‐pairing hydrogen bonds into a chain along [010]. The stacked dimers form channels, which are occupied by iodide anions. The cations and anions are associated by N—H...I hydrogen bonds, C—H...I interactions and I...thiazolium ring close contacts. The interactions between thiamine and the iodide anions are similar to those observed in monoclinic thiamine iodide 1.5‐hydrate [Hu & Zhang (1993). J. Inclusion Phenom. Mol. Recognit. Chem. 16 , 273–281].     

An unusual two‐dimensional hydrogen‐bonding network in bis(2,9‐dimethyl‐1,10‐phenanthrolin‐1‐ium) peroxodisulfate dihydrate

The title compound, 2C₁₄H₁₃N₂⁺·S₂O₈²⁻·2H₂O, is a protonated amine salt which is formed from two rather uncommon ionic species, namely a peroxodisulfate (pds²⁻) anion, which lies across a crystallographic inversion centre, and a 2,9‐dimethyl‐1,10‐phenanthrolin‐1‐ium (Hdmph⁺) cation lying in a general position. Each pds²⁻ anion binds to two water molecules through strong water–peroxo O—H...O interactions, giving rise to an unprecedented planar network of hydrogen‐bonded macrocycles which run parallel to (100). The atoms of the large R₈⁸(30) rings are provided by four water molecules bridging in fully extended form (...H—O—H...) and four pds²⁻ anions alternately acting as long (...O—S—O—O—S—O...) and short (...O—S—O...) bridges. The Hdmph⁺ cations, in turn, bind to these units through hydrogen bonds involving their protonated N atoms. In addition, the crystal structure also contains π–π and aromatic–peroxo C—H...O interactions.     

Brucine salts of l‐α‐hydr­oxy acids: brucinium hydrogen (S)‐malate penta­hydrate and anhydrous brucinium hydrogen (2R,3R)‐tartrate at 130 K

The structures of two brucinium (2,3‐dimeth­oxy‐10‐oxostrychnidinium) salts of the α‐hydr­oxy acids l ‐malic acid and l ‐tartaric acid, namely brucinium hydrogen (S)‐malate penta­hydrate, C₂₃H₂₇N₂O₄⁺·C₄H₅O₅⁻·5H₂O, (I), and anhydrous brucinium hydrogen (2R,3R)‐tartrate, C₂₃H₂₇N₂O₄⁺·C₄H₅O₆⁻,(II), have been determined at 130 K. Compound (I) has two brucinium cations, two hydrogen malate anions and ten water mol­ecules of solvation in the asymmetric unit, and forms an extensively hydrogen‐bonded three‐dimensional framework structure. In compound (II), the brucinium cations form the common undulating brucine sheet substructures, which accommodate parallel chains of head‐to‐tail hydrogen‐bonded tartrate anion species in the inter­stitial cavities.     

A novel alkaline earth strontium(II) coordination polymer: poly[hexaaquatetrakis(μ5‐pyridine‐2,6‐dicarboxylato)bis(μ4‐pyridine‐2,6‐dicarboxylato)(μ7‐sulfato)heptastrontium(II)]

The title compound, [Sr₇(C₇H₃NO₄)₆(SO₄)(H₂O)₆]_n, has been synthesized by an ionothermal method using the ionic liquid 1‐ethyl‐3‐methylimidazolium ([Emim]Br) as solvent, and characterized by elemental analysis, energy‐dispersive X‐ray spectroscopy, IR and single‐crystal X‐ray diffraction. The structure of the compound can be viewed as a three‐dimensional coordination polymer composed of Sr²⁺ cations, pyridine‐2,6‐dicarboxylate anions, sulfate anions and water molecules. The compound not only exhibits a three‐dimensional structure with a unique coordination mode of the sulfate anion, but also features the first example of a heptanuclear strontium(II) coordination polymer. The structure is further stabilized by O—H...O hydrogen bonds and π–π stacking interactions.     

Tetraaquabis(d‐camphor‐10‐sulfonato)calcium(II)

The structure of the title compound, [Ca(C₁₀H₁₅O₄S)₂(H₂O)₄], is the first example in which two d ‐camphor‐10‐sulfonate anions are coordinated to a metal ion, in this case with direct Ca—O bonding. The molecule has crystallographically imposed twofold symmetry with the Ca atom on the twofold axis. Hydrogen bonds are formed between the coordinated water molecules and the O atoms of the SO₃⁻ groups of adjacent molecules, leading to the formation of a two‐dimensional layered network. The compound displays sharp wavelength‐selective transparency in the UV–visible spectrum, offering the potential for application as an optical filter.