Conformational Study of Heteropentapeptides Containing an α‐Ethylated α,α‐Disubstituted Amino Acid: (S)‐Butylethylglycine (=2‐Amino‐2‐ethylhexanoic Acid) within a Sequence of Dimethylglycine (=2‐Aminoisobutyric Acid) Residues

Heteropentapeptides containing the α‐ethylated α,α‐disubstituted amino acid (S)‐butylethylglycine and four dimethylglycine residues, i.e., CF₃CO‐[(S)‐Beg]‐(Aib)₄‐OEt ( 4 ) and CF₃CO‐(Aib)₂‐[(S)‐Beg]‐(Aib)₂‐OEt ( 7 ), were synthesized by conventional solution methods. In the solid state, the preferred conformation of 4 was shown to be both a right‐handed (P) and a left‐handed (M) 3₁₀‐helical structure, and that of 7 was a right‐handed (P) 3₁₀‐helical structure. IR, CD, and ¹H‐NMR spectra revealed that the dominant conformation of both 4 and 7 in solution was the 3₁₀‐helical structure. These conformations were also supported by molecular‐mechanics calculations.     

2‐[(E)‐(4‐Hydroxy‐3‐methoxybenzylidene)amino]‐N‐(2‐methylphenyl)‐4,5,6,7‐tetrahydro‐1‐benzothiophene‐3‐carboxamide

The title compound, C₂₄H₂₄N₂O₃S, exhibits antifungal and antibacterial properties. The compound crystallizes with two molecules in the asymmetric unit, with one molecule exhibiting `orientational disorder' in the crystal structure with respect to the cyclohexene ring. The o‐toluidine groups in both molecules are noncoplanar with the respective cyclohexene‐fused thiophene ring. In both molecules, there is an intramolecular N—H...N hydrogen bond forming a pseudo‐six‐membered ring which locks the molecular conformation and eliminates conformational flexibility. The crystal structure is stabilized by O—H...O hydrogen bonds; both molecules in the asymmetric unit form independent chains, each such chain consisting of alternating `ordered' and `disordered' molecules in the crystal lattice.     

17β‐Ethoxy‐3‐methoxy‐8‐isoestra‐1,3,5(10)‐triene

The conformation of the crystal of 17β‐ethoxy‐3‐methoxy‐8‐iso­estra‐1,3,5(10)‐triene, C₂₁H₃₀O₂, (I), has been established and compared with the molecular structure of a typical steroid estrogen 8‐iso‐analogue, (II). Calculations of distances separating some of the H‐atom pairs in (I) and (II) by molecular‐mechanical and semi‐empirical methods revealed the similarity of the values to the H⃛H distances obtained from X‐ray analysis.     

Conformation of Peptides Containing a Chiral α‐Ethylated α,α‐Disubstituted α‐Amino Acid: (S)‐α‐Ethylleucine (=(2S)‐2‐Amino‐2‐ethyl‐4‐methylpentanoic Acid) within Sequences of Dimethylglycine and Diethylglycine Residues

An optically active (S)‐α‐ethylleucine ((S)‐αEtLeu) as a chiral α‐ethylated α,α‐disubstituted α‐amino acid was synthesized by means of a chiral acetal auxiliary of (R,R)‐cyclohexane‐1,2‐diol. The chiral α‐ethylated α,α‐disubstituted amino acid (S)‐αEtLeu was introduced into the peptides constructed from 2‐aminoisobutyric acid (=dimethylglycine, Aib), and also into the peptide prepared from diethylglycine (Deg). The X‐ray crystallographic analysis revealed that both right‐handed (P) and left‐handed (M) 3₁₀‐helical structures exist in the solid state of CF₃CO‐(Aib)₂‐[(S)‐αEtLeu]‐(Aib)₂‐OEt ( 14 ) and CF₃CO‐[(S)‐αEtLeu]‐(Deg)₄‐OEt ( 18 ), respectively. The IR, CD, and ¹H‐NMR spectra indicated that the dominant conformation of pentapeptides 14 and CF₃CO‐[(S)‐αEtLeu]‐(Aib)₄‐OEt ( 16 ) in solution is a 3₁₀‐helical structure, and that of 18 in solution is a planar C₅ conformation. The conformation of peptides was also studied by molecular‐mechanics calculations.     

2‐(3‐tert‐Butyldimethylsiloxy‐4‐methoxyphenyl)‐6‐methoxy‐3‐(3,4,5‐trimethoxybenzoyl)indole

In the crystal structure of the title compound, C₃₂H₃₉NO₇Si, all geometric parameters fall within experimental error of expected values. The analysis of molecular‐packing plots reveals an infinite two‐dimensional linear array running parallel to the b axis, formed by one N—H?O intermolecular hydrogen‐bonding interaction. Several potential C—H?O interactions are also present.     

(2‐Meth­oxy‐3‐pyrid­yl)boronic acid

The structure of the title compound, 2‐CH₃O‐C₅H₃N–3‐B(OH)₂ or C₆H₈BNO₃, comprises two crystallographically independent mol­ecules. The molecules are linked to each other by inter­molecular O—H⋯N and C—H⋯O bonds to produce an infinite chain, while a two‐dimensional structure is formed as a result of π–π inter­actions of planar mol­ecules.     

Synthesis and characterization of poly(1,4‐bis((E)‐2‐(3‐dodecylthiophen‐2‐yl)vinyl)benzene) derivatives

New amorphous semiconducting copolymers, poly(9,9‐dialkylfluorene)‐alt‐(3‐dodecylthienyl‐divinylbenzene‐3‐dodecylthienyl) derivatives (PEFTVB and POFTVB), were designed, synthesized, and characterized. The structure of copolymers was confirmed by H NMR, IR, and elemental analysis. The copolymers showed very good solubility in organic solvents and high thermal stability with high T_g of 178–185 °C. The weight average molecular weight was found to be 107,900 with polydispersity of 3.14 for PEFTVB and 76,700 with that of 3.31 for POFTVB. UV–vis absorption studies showed the maximum absorption at 428 nm (in solution) and 435 nm (in film) for PEFTVB and at 430 nm (in solution) and 436 nm (in film) for POFTVB. Photoluminescence studies showed the emission at 498 nm (in solution) and 557 nm (in film) for PEFTVB and at 498 nm (in solution) and 536 nm (in film) for POFTVB. The solution‐processed thin‐film transistors showed the carrier mobility of 2 × 10^?4 cm² V^?1 s^?1 for PEFTVB‐based devices and 2 × 10^?5 cm² V^?1 s^?1 for POFTVB‐based devices. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 3942–3949, 2010     

Poly[μ2‐(N‐hydroxypyridine‐2‐carboxamidine)‐μ2‐nitrato‐silver(I)]

In the title complex, [Ag(NO₃)(C₆H₇N₃O)]_n or [Ag(NO₃)(pyaoxH₂)] (pyaoxH₂ is N‐hydroxypyridine‐2‐carboxamidine), the Ag⁺ ion is bridged by the pyaoxH₂ ligands and nitrate anions, giving rise to a two‐dimensional molecular structure. Each pyaoxH₂ ligand coordinates to two Ag⁺ ions using its pyridyl and carboxamidine N atoms, and the OH and the NH₂ groups are uncoordinated. Each nitrate anion uses two O atoms to coordinate to two Ag⁺ ions. The Ag...Ag separation via the pyaoxH₂ bridge is 2.869 (1) Å, markedly shorter than that of 6.452 (1) Åvia the nitrate bridge. The two‐dimensional structure is fishscale‐like, and can be described as pyaoxH₂‐bridged Ag₂ nodes that are further linked by nitrate anions. Hydrogen bonding between the amidine groups and the nitrate O atoms connects adjacent layers into a three‐dimensional network.     

Conformational polymorphs of 3‐cyclopropyl‐5‐(3‐methyl‐[1,2,4]triazolo[4,3‐a]pyridin‐7‐yl)‐1,2,4‐oxadiazole

The dipharmacophore compound 3‐cyclopropyl‐5‐(3‐methyl‐[1,2,4]triazolo[4,3‐a]pyridin‐7‐yl)‐1,2,4‐oxadiazole, C₁₂H₁₁N₅O, was studied on the assumption of its potential biological activity. Two polymorphic forms differ in both their molecular and crystal structures. The monoclinic polymorphic form was crystallized from more volatile solvents and contains a conformer with a higher relative energy. The basic molecule forms an abundance of interactions with relatively close energies. The orthorhombic polymorph was crystallized very slowly from isoamyl alcohol and contains a conformer with a much lower energy. The basic molecule forms two strong interactions and a large number of weak interactions. Stacking interactions of the `head‐to‐head' type in the monoclinic structure and of the `head‐to‐tail' type in the orthorhombic structure proved to be the strongest and form stacked columns in the two polymorphs. The main structural motif of the monoclinic structure is a double column where two stacked columns interact through weak C—H…N hydrogen bonds and dispersive interactions. In the orthorhombic structure, a single stacked column is the main structural motif. Periodic calculations confirmed that the orthorhombic structure obtained by slow evaporation has a lower lattice energy (0.97 kcal mol^?1) compared to the monoclinic structure.     

Concomitant polymorphic forms of 3‐cyclopropyl‐5‐(2‐hydrazinylpyridin‐3‐yl)‐1,2,4‐oxadiazole

The dipharmacophore compound 3‐cyclopropyl‐5‐(2‐hydrazinylpyridin‐3‐yl)‐1,2,4‐oxadiazole, C₁₀H₁₁N₅O, was studied on the assumption of its potential biological activity. Two concomitant polymorphs were obtained on crystallization from isopropanol solution and these were thoroughly studied. Identical conformations of the molecules are found in both structures despite the low difference in energy between the four possible conformers. The two polymorphs differ crucially with respect to their crystal structures. A centrosymmetric dimer formed due to both stacking interactions of the `head‐to‐tail' type and N—H…N(π) hydrogen bonds is the building unit in the triclinic structure. The dimeric building units form an isotropic packing. In the orthorhombic polymorphic structure, the molecules form stacking interactions of the `head‐to‐head' type, which results in their organization in a column as the primary basic structural motif. The formation of N—H…N(lone pair) hydrogen bonds between two neighbouring columns allows the formation of a double column as the main structural motif. The correct packing motifs in the two polymorphs could not be identified without calculations of the pairwise interaction energies. The triclinic structure has a higher density and a lower (by 0.60 kcal mol^?1) lattice energy according to periodic calculations compared to the orthorhombic structure. This allows us to presume that the triclinic form of 3‐cyclopropyl‐5‐(2‐hydrazinylpyridin‐3‐yl)‐1,2,4‐oxadiazole is the more stable.     

Eine neue Form von PdSCl: Der molekulare Komplex Tris(μ4‐disulfido)‐hexa‐μ2‐chloro‐hexapalladium(II) [Pd6(S2)3Cl6]

The Molecular Complex Tris(μ₄‐disulfido)‐hexa‐μ₂‐chloro‐hexapalladium [Pd₆(S₂)₃Cl₆] A new hexameric form of PdSCl have been obtained by reaction of Pd metal with sulfur in SCl₂ solution at 180 °C in a closed silica ampoule. The monoclinic crystal structure of β‐PdSCl (space group P2₁ /m; a = 7.766(2)Å; b = 11.941(2)Å; c = 9.136(3)Å; β = 110.57(3)°; Z =12) is built up by clusters [Pd₆(S₂)₃Cl₆] with nearly D_3h symmetry. In the molecular units six Pd atoms form a trigonal prism with three S₂ disulfide groups in front of the side faces. The fourfold coordination of the Pd atoms is completed by 6 Cl atoms forming μ₂ bridges.     

4,4′‐Butane‐1,4‐diylbis[3‐ethyl‐1H‐1,2,4‐triazol‐5(4H)‐one] and 4‐hydr­oxy‐3‐n‐prop­yl‐1H‐1,2,4‐triazol‐5(4H)‐one

The title compounds, C₁₂H₂₀N₆O₂, (I), and C₅H₉N₃O₂, (II), display the characteristic features of 1,2,4‐triazole derivatives. Compound (I) lies about an inversion centre which is at the mid‐point of the central C—C bond. Compound (II) also contains a planar 1,2,4‐triazole ring but differs from (I) in that it has a hydr­oxy group attached to the ring. Mol­ecules of (I) are held together in the crystal structure by inter­molecular N—H⋯O contacts and by weak π–π stacking inter­actions between the 1,2,4‐triazole moieties. Compound (II) contains inter­molecular O—H⋯O and N—H⋯O hydrogen bonds.     

catena‐Poly[[[bis(μ‐4,5‐dihydrothiazole‐2‐thiolato)‐tetrahedro‐tetracopper(I)]‐di‐μ‐4,5‐dihydrothiazole‐2‐thiolato] dihydrate]

The title compound, {[Cu₄(C₃H₄NS₂)₄]·2H₂O}_n, was produced by diffusing a solution of 2‐mercapto­thia­zoline in tetra­hydro­furan into a solution of CuCl in CH₃CN at room temperature. The structure is characterized by self‐assembled one‐dimensional chains that are condensed from butterfly‐like [Cu(C₃H₄NS₂)]₄ tetrameric units via double S‐bridging at opposite ends. The Cu—Cu distances within the Cu₄ butterfly cluster are in the range 2.7103 (10)–2.9764 (10) Å, while the shortest Cu?Cu intercluster distance is 3.468 (1) Å, much longer than the sum of the van der Waals radii.     

2‐Amino‐3‐methyl‐6‐[methyl(phenyl)amino]‐5‐nitropyrimidin‐4(3H)‐one: polarized molecules within hydrogen‐bonded sheets

The pyrimidinone ring in the title compound, C₁₂H₁₃N₅O₃, is effectively planar, despite the presence of five substituents. The bond distances provide evidence for significant polarization of the electronic structure, with charge separation, and the molecules are linked into sheets by a combination of N—H...O and N—H...π(arene) hydrogen bonds. Comparisons are made with the molecular and supramolecular structures of the precursor compound 2‐amino‐6‐[methyl(phenyl)amino]‐5‐nitropyrimidin‐4(3H)‐one.     

Bis­[2,6‐bis(1H‐benzimidazol‐2‐yl‐κN3)pyridinato‐κN]zinc(II)

The structure of [Zn(C₁₉H₁₂N₅)₂], which is monomeric and consists of neutral Zn(bbip‐H)₂ entities [bbip‐H is the anionic form of bis­(benz­imidazolyl)­pyridine, formed by the loss of one H atom], has been solved from a racemic twin. The Zn atom lies at a site with imposed 222 symmetry and the bbip‐H ligand has imposed twofold symmetry. The imidazolyl H atom is disordered over two symmetry‐related positions, thus raising the molecular symmetry as required by the space group. The angle between the planes of the two coordinated bbip‐H ligands is 84.6 (3)°, so defining a distorted octahedral environment around the metal atom.     

3‐Amino‐1,2,4‐triazine

In the crystal structure of 3‐amino‐1,2,4‐triazine, C₃H₄N₄, the mol­ecules form hydrogen‐bonded chains that are almost parallel to the b axis (3.2°), and which are inclined to the a and c axes by ～21 and ～69°, respectively. The distortion of the 1,2,4‐triazine ring in the crystal is compared with gas‐phase ab initio molecular‐orbital calculations.     

3‐(4‐Bromo­phenyl)‐2‐(3,4‐di­hydro‐2H‐pyran‐5‐yl)‐1,1,1‐tri­fluoro­propan‐2‐ol

The molecular structure of the title compound, C₁₄H₁₄BrF₃O₂, adopts a bent conformation. Intramolecular O—H?F and intermolecular O—H?O interactions form a bifurcated hydrogen bond which produces a supramolecular assembly of head‐to‐tail dimers.     

(E)‐3‐{4‐[(7‐Chloroquinolin‐4‐yl)oxy]‐3‐methoxyphenyl}‐1‐(4‐methylphenyl)prop‐2‐en‐1‐one: a ladder‐like structure resulting solely from π–π stacking interactions

In the title compound, C₂₆H₂₀ClNO₃, the quinoline fragment is nearly orthogonal to the adjacent aryl ring, while the rest of the molecular skeleton is close to being planar. The crystal structure contains no hydrogen bonds of any sort, but there are two π–π stacking interactions present. One, involving the quinoline ring, links molecules related by inversion, while the other, involving the two nonfused aryl rings, links molecules related by translation, so together forming a ladder‐type arrangement     

Two polymorphs of chlorpropamide: the δ‐form and the high‐temperature ɛ‐form

The ɛ‐form of chlorpropamide [systematic name: 4‐chloro‐N‐(propylaminocarbonyl)benzenesulfonamide], C₁₀H₁₃ClN₂O₃S, has been obtained as single crystals from solution (and not as a polycrystalline sample by heating the α‐, γ‐ or δ‐forms). The results of anisotropic structure refinements for the ɛ‐ and δ‐forms are reported. The density of the δ‐polymorph is the highest, and that of the ɛ‐polymorph the lowest, among the five known chlorpropamide polymorphs. The main intermolecular hydrogen‐bonding pattern in polymorphs δ and ɛ is the same as in polymorphs α, β and γ, but the conformations differ. The densities of the polymorphs were found to depend on the molecular conformations.     

Bis{μ‐2‐[(2,3‐dichloro­phenyl)­amino]­benzoato‐κO}di‐μ2‐ethoxo‐octa­methyl­di‐μ3‐oxo‐tetra­tin(IV)

The title compound, [Sn₄(CH₃)₈(C₁₃H₈Cl₂NO₂)₂(C₂H₅O)₂O₂], is a centrosymmetric dimer, with three linearly fused four‐membered Sn—O—Sn—O rings. The coordination poly­hedron of the Sn atom bonded to the carboxyl­ate can be described as trigonal–bipyramidal distorted toward square‐pyramidal. That of the second Sn atom is similar, but the distortion towards square‐pyramidal geometry is greater. The Sn—O and Sn—C distances are 2.020 (2)–2.226 (2) and 2.096 (4)–2.114 (4) Å, respectively. The benzene rings of the 2‐[(2,3‐dichloro­phenyl)­amino]benzoate ligand subtend an angle of 50.49 (17)°; the conformation of the ligand is stabilized by intra­molecular N—H⋯Cl and N—H⋯O hydrogen bonds. The structure is assembled viaπ–π stacking inter­actions to form chains parallel to [10].